View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4830-Insertion-15 (Length: 243)
Name: NF4830-Insertion-15
Description: NF4830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4830-Insertion-15 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 243
Target Start/End: Original strand, 8561330 - 8561570
Alignment:
| Q |
7 |
acatctatcactagctaactaaaacttaagttgactaagcaatccttgaatatatagcatcaataaatttaagctaatatacacaacaaactgaaccaaa |
106 |
Q |
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| T |
8561330 |
acatctatcactagctaactaaaacttaagttgactaagaaatccttgaatatataacatcaataaagttaagctaatatacacaacaaactgaaccaaa |
8561429 |
T |
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| Q |
107 |
tatg--tcga-taagttcaatttggacgacaacgaattaaagtcagagggcggcaaagactttgtgtgaatg-cagcaacttggttggcagagatactga |
202 |
Q |
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| T |
8561430 |
tatgtttcgattaagttcaatttggacgacaacgaattaaagtcagagggcggcaaagactttgtgtgaatgtcagcaacttggttggcagagatactga |
8561529 |
T |
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| Q |
203 |
tattaattggatgataccagtctgaactctgaactttttct |
243 |
Q |
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| T |
8561530 |
tattaattggatgacaccagtctgaactctgaactttttct |
8561570 |
T |
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