View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4830_high_10 (Length: 328)
Name: NF4830_high_10
Description: NF4830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4830_high_10 |
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Alignment Details
Target: chr2 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 2 - 321
Target Start/End: Complemental strand, 9219989 - 9219670
Alignment:
| Q |
2 |
gattgaagcagcaacttaagcctcgcattggaggaatgaatgtttcattacttgtaaacgtcaaaacaagttttttcatgatttccaatgtttgatttca |
101 |
Q |
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| T |
9219989 |
gattgaagcagcaacttaggcctcgcattggaggaatgaatgtttcattacttgtaaacgtcaaaacaagttttttcatgatttccaatgtttgatttca |
9219890 |
T |
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| Q |
102 |
atttgggttcatgattccttccgtgcaaatgggaatcctaacacaaacaaatatattctttatcgtatggtatcattggtatggttcttgaggcatcact |
201 |
Q |
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| T |
9219889 |
agttgggttcatgattccttccgtgcaaatgggaatcctaacacaaacaaatatatgctttatcgtatggtatcattggtatggttcttgaggcatcact |
9219790 |
T |
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| Q |
202 |
aaagtgtgtgttcaggcgactaataaatcattgcaataccacacatttggttaactctcaaatttagcatgatctcgttgatttcacattaggacgtgag |
301 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
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| T |
9219789 |
aaagtgtgtgttcaggcgactaataaatcattacaataccacacatttggttaactctcaaattttgcatgatctcgttgatttcacattaggacgtgag |
9219690 |
T |
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| Q |
302 |
aaatccttctccaactccat |
321 |
Q |
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| T |
9219689 |
aaatccttctccaactccat |
9219670 |
T |
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