View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4831-Insertion-6 (Length: 426)
Name: NF4831-Insertion-6
Description: NF4831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4831-Insertion-6 |
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Alignment Details
Target: chr1 (Bit Score: 368; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 8 - 411
Target Start/End: Complemental strand, 27027895 - 27027493
Alignment:
| Q |
8 |
gatattccgattcatttttatgtatgaagtgaattctaatgaaaactttctggtgtcaatatacagaacttagcagcatccatagataatgtgggactac |
107 |
Q |
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| T |
27027895 |
gatattccgattcatttttatgtatgaagtgaattctaatgaaaactttctggtgtcaatatacagaacttagcagcatccatagataatgtgggactac |
27027796 |
T |
|
| Q |
108 |
atgatttatttcaaaaatatgggaacattttgtccagcaaaattgccaggtctgaggatgggaagagcaaagggtttggttatatccagtttgattcaga |
207 |
Q |
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| T |
27027795 |
atgatttatttcaaaaatatgggaacattttgtccagcaaaattgccaggtctgaggatgggaagagcaaagggtttggttatatccagtttgattcaga |
27027696 |
T |
|
| Q |
208 |
ggagtctgcaaatgtggctatccagaaaatgaatggctctactgtgagagataagcagatgtatgtgaaattattttagcgcttgttaaaatttgccgtc |
307 |
Q |
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| T |
27027695 |
ggagtctgcaaatgtggctatccagaaaatgaatggctctactgtgagagataagcagatgtatgtgaaattattttagcgcttgttaaaatttgccgtc |
27027596 |
T |
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| Q |
308 |
attgatatccatatatgttgtgatttgaagtctatgnnnnnnnngccttcagttaattgctgtttttgttatcctaagattggttttaatcccgattcca |
407 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
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| T |
27027595 |
attgatatccatatatgttgtgatttgaagtctatgttttttttgccttcagttaattgctgtttttgttatcctaagattggttttaat-ctgattcca |
27027497 |
T |
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| Q |
408 |
attc |
411 |
Q |
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|||| |
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| T |
27027496 |
attc |
27027493 |
T |
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