View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4831-Insertion-9 (Length: 203)
Name: NF4831-Insertion-9
Description: NF4831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4831-Insertion-9 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 50 - 203
Target Start/End: Complemental strand, 2469700 - 2469547
Alignment:
| Q |
50 |
ggtaatgcactacatccaattttaattttaagtatacaaagtctgtatggaaatactccttaaatgtcaaatatgaatattttgaaacgcactttatcaa |
149 |
Q |
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| T |
2469700 |
ggtaatgcactacatccaattttaattttaagtatacaaagtctgtatggaaatactccttaaatgtcaaacatgaatattttgaaacgcactttatcaa |
2469601 |
T |
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| Q |
150 |
atttattttaattttaagtgtgcatattgtgtatggaaccactccttaaatttc |
203 |
Q |
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| T |
2469600 |
atttatattaattttaagtgtgcatattgtgtatggaaccactccttaaatttc |
2469547 |
T |
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