View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4831_low_2 (Length: 492)
Name: NF4831_low_2
Description: NF4831
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4831_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 433; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 433; E-Value: 0
Query Start/End: Original strand, 18 - 470
Target Start/End: Complemental strand, 30151537 - 30151085
Alignment:
| Q |
18 |
atcatcagttatgaccattctgaactatttcctgagaagctcaacaaaatcaccacgacaatttacatttcagtcacaatatctgatatagcagaactag |
117 |
Q |
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| T |
30151537 |
atcatcagttatgaccattctgaactatttccggagaagctcaacaaaatcaccacgacaatttacatttcagtcacaatatctgatatagcagaactag |
30151438 |
T |
|
| Q |
118 |
actaaagaagaattaacatgattacatagaggaatgtgttgtatggacaagaaaccattatgcagaagaatggtagcagccaaagcatcctcgtatagat |
217 |
Q |
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||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151437 |
actaaagaagaattaacatgattgcatacaggaatgtgttgtatggacaagaagccattatgcagaagaatggtagcagccaaagcatcctcgtatagat |
30151338 |
T |
|
| Q |
218 |
aaatgtttatgtactgagggtactggcctgggctcagcctcagtatcaggttttttgcgcggataatgtttatagaaggcgttaactgctcctgctaccc |
317 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151337 |
aaatgtttatgtactgagggtactggcctgggctcagcctcagtatcaggtttttcgcgcggataatgtttatagaaggcgttaactgctcctgctaccc |
30151238 |
T |
|
| Q |
318 |
catcttcatttttcatggcgttagcaagttcaacagcacgctttttcacctgcataaaagcacaaaacaatatatcaaaagacataagaaaacgaataga |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151237 |
catcttcatttttcatggcgttagcaagttcaacagcacgctttttcacctgcataaaagcacaaaacaatatatcaaaagacataagaaaacgaataga |
30151138 |
T |
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| Q |
418 |
tgaaagcctcttaagttatcaacgaaggcacaacactggttggcctacttaat |
470 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30151137 |
tgaaagcctcttaagttatcaacgaaggcacaacactggttggcctacttaat |
30151085 |
T |
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