View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4833_high_2 (Length: 446)

Name: NF4833_high_2
Description: NF4833
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4833_high_2
NF4833_high_2
[»] chr4 (70 HSPs)
chr4 (253-445)||(48403324-48403516)
chr4 (14-210)||(13093819-13094013)
chr4 (14-164)||(27864126-27864276)
chr4 (14-210)||(35809612-35809807)
chr4 (9-210)||(53347341-53347546)
chr4 (12-159)||(33607227-33607374)
chr4 (253-422)||(33609420-33609589)
chr4 (253-332)||(35809856-35809935)
chr4 (253-422)||(33523842-33524011)
chr4 (12-158)||(16171599-16171746)
chr4 (13-160)||(18469058-18469204)
chr4 (253-332)||(19273378-19273457)
chr4 (253-445)||(16171314-16171506)
chr4 (15-96)||(28447458-28447539)
chr4 (12-89)||(28901325-28901402)
chr4 (12-96)||(28901165-28901249)
chr4 (253-332)||(13093698-13093777)
chr4 (13-96)||(34434310-34434392)
chr4 (30-207)||(3614905-3615082)
chr4 (49-163)||(17329606-17329720)
chr4 (42-163)||(48403603-48403724)
chr4 (50-210)||(19273172-19273331)
chr4 (12-96)||(23539449-23539533)
chr4 (253-332)||(27864373-27864452)
chr4 (253-343)||(33077384-33077474)
chr4 (14-96)||(34199036-34199118)
chr4 (12-96)||(3530036-3530120)
chr4 (12-96)||(8994964-8995048)
chr4 (12-96)||(34463316-34463400)
chr4 (13-96)||(13113743-13113826)
chr4 (253-396)||(53347161-53347304)
chr4 (253-313)||(3529803-3529863)
chr4 (253-313)||(8995222-8995282)
chr4 (253-313)||(34198801-34198861)
chr4 (253-313)||(40721473-40721533)
chr4 (253-364)||(28447684-28447795)
chr4 (67-160)||(4981935-4982028)
chr4 (12-65)||(33523648-33523701)
chr4 (261-313)||(18468908-18468960)
chr4 (12-96)||(33077637-33077721)
chr4 (253-313)||(38174004-38174064)
chr4 (253-331)||(56054709-56054787)
chr4 (253-330)||(23539204-23539281)
chr4 (253-330)||(31336069-31336146)
chr4 (261-366)||(34434046-34434151)
chr4 (253-330)||(52018111-52018188)
chr4 (253-313)||(23389515-23389575)
chr4 (18-96)||(2212125-2212203)
chr4 (18-96)||(19409695-19409773)
chr4 (109-210)||(23389625-23389726)
chr4 (109-207)||(38173858-38173955)
chr4 (18-96)||(46914319-46914397)
chr4 (18-96)||(53181261-53181339)
chr4 (253-314)||(28901576-28901637)
chr4 (253-314)||(48506143-48506204)
chr4 (253-305)||(3614800-3614852)
chr4 (253-313)||(34463086-34463146)
chr4 (12-96)||(56054468-56054547)
chr4 (109-160)||(45081182-45081233)
chr4 (261-303)||(17329466-17329508)
chr4 (18-96)||(21654632-21654710)
chr4 (18-96)||(47749857-47749935)
chr4 (253-330)||(52773354-52773431)
chr4 (253-313)||(55549602-55549662)
chr4 (254-313)||(4982121-4982180)
chr4 (253-330)||(13113990-13114064)
chr4 (109-159)||(33523712-33523762)
chr4 (253-313)||(16021309-16021369)
chr4 (350-396)||(3614709-3614755)
chr4 (350-396)||(6309134-6309180)
[»] chr8 (46 HSPs)
chr8 (254-445)||(23550210-23550401)
chr8 (14-163)||(13947683-13947832)
chr8 (12-160)||(1633121-1633269)
chr8 (12-163)||(13783891-13784042)
chr8 (16-153)||(30529358-30529495)
chr8 (12-93)||(43524020-43524101)
chr8 (253-332)||(26245093-26245172)
chr8 (253-332)||(40284070-40284149)
chr8 (253-422)||(44503731-44503900)
chr8 (50-210)||(26244885-26245044)
chr8 (12-96)||(38204997-38205081)
chr8 (50-210)||(40283863-40284022)
chr8 (53-163)||(44150158-44150268)
chr8 (30-158)||(1954956-1955084)
chr8 (12-96)||(15056792-15056876)
chr8 (50-210)||(29731939-29732098)
chr8 (253-332)||(13947899-13947978)
chr8 (253-343)||(15057049-15057139)
chr8 (53-163)||(23550002-23550111)
chr8 (256-343)||(31128973-31129060)
chr8 (16-96)||(27392687-27392767)
chr8 (253-372)||(13783679-13783798)
chr8 (253-372)||(30529143-30529262)
chr8 (254-313)||(44150349-44150408)
chr8 (254-313)||(29732149-29732208)
chr8 (18-96)||(36912781-36912859)
chr8 (49-159)||(44503518-44503628)
chr8 (253-330)||(13497731-13497808)
chr8 (253-313)||(38204819-38204879)
chr8 (253-313)||(45100568-45100628)
chr8 (18-96)||(8449815-8449893)
chr8 (18-96)||(13817264-13817342)
chr8 (18-96)||(35101610-35101688)
chr8 (253-314)||(7511306-7511367)
chr8 (254-302)||(1632976-1633024)
chr8 (254-306)||(43523822-43523874)
chr8 (18-93)||(17744791-17744866)
chr8 (253-396)||(35932323-35932466)
chr8 (253-396)||(1954715-1954858)
chr8 (18-98)||(26748738-26748818)
chr8 (109-207)||(31129108-31129204)
chr8 (253-312)||(12272010-12272069)
chr8 (253-298)||(42860385-42860430)
chr8 (262-331)||(5736493-5736562)
chr8 (262-331)||(34954862-34954931)
chr8 (174-210)||(13783841-13783877)
[»] chr1 (54 HSPs)
chr1 (254-445)||(45363941-45364132)
chr1 (12-163)||(29524120-29524271)
chr1 (12-163)||(45363698-45363849)
chr1 (12-164)||(33167432-33167587)
chr1 (12-207)||(51156341-51156535)
chr1 (12-207)||(8471433-8471627)
chr1 (13-163)||(47297291-47297441)
chr1 (16-159)||(51523490-51523633)
chr1 (12-89)||(17676127-17676204)
chr1 (253-396)||(29524363-29524506)
chr1 (30-207)||(2474780-2474957)
chr1 (14-96)||(18317598-18317680)
chr1 (50-163)||(45455605-45455718)
chr1 (12-96)||(31159642-31159726)
chr1 (15-159)||(36231138-36231281)
chr1 (253-333)||(47297122-47297202)
chr1 (12-96)||(48384956-48385040)
chr1 (253-330)||(10265503-10265580)
chr1 (253-313)||(48384721-48384781)
chr1 (263-333)||(30878160-30878230)
chr1 (254-332)||(51156222-51156300)
chr1 (253-313)||(45455453-45455513)
chr1 (265-343)||(17675834-17675913)
chr1 (254-313)||(31159891-31159950)
chr1 (253-364)||(51523720-51523831)
chr1 (253-343)||(33167677-33167767)
chr1 (109-163)||(37822920-37822974)
chr1 (253-331)||(43739490-43739568)
chr1 (18-92)||(52930477-52930551)
chr1 (253-330)||(36231383-36231460)
chr1 (253-313)||(37823067-37823127)
chr1 (253-313)||(45623074-45623134)
chr1 (12-91)||(48407579-48407658)
chr1 (18-96)||(31471401-31471479)
chr1 (18-96)||(37420005-37420083)
chr1 (18-96)||(45242265-45242343)
chr1 (253-305)||(2474675-2474727)
chr1 (253-313)||(14097156-14097216)
chr1 (253-313)||(29919829-29919889)
chr1 (75-210)||(30878287-30878420)
chr1 (253-313)||(37690841-37690901)
chr1 (253-313)||(51494016-51494076)
chr1 (253-330)||(8471675-8471752)
chr1 (253-300)||(19578477-19578524)
chr1 (18-96)||(17786458-17786536)
chr1 (18-96)||(27630121-27630199)
chr1 (38-96)||(36303329-36303387)
chr1 (38-96)||(48729669-48729727)
chr1 (55-96)||(48927133-48927174)
chr1 (253-292)||(17675913-17675952)
chr1 (350-396)||(2474584-2474630)
chr1 (118-164)||(43739357-43739403)
chr1 (174-210)||(29524285-29524321)
chr1 (174-210)||(45363862-45363898)
[»] chr2 (45 HSPs)
chr2 (253-446)||(7762605-7762799)
chr2 (262-445)||(17486269-17486453)
chr2 (12-210)||(7762836-7763033)
chr2 (13-163)||(17928907-17929057)
chr2 (13-210)||(36209115-36209312)
chr2 (13-159)||(6363610-6363756)
chr2 (12-210)||(4279312-4279510)
chr2 (12-159)||(5145081-5145228)
chr2 (53-164)||(17486102-17486213)
chr2 (30-207)||(7585190-7585367)
chr2 (53-210)||(1308334-1308491)
chr2 (12-96)||(22349679-22349763)
chr2 (13-81)||(39490347-39490415)
chr2 (253-313)||(22349445-22349505)
chr2 (253-313)||(43022150-43022210)
chr2 (254-313)||(17928748-17928807)
chr2 (18-96)||(2778929-2779007)
chr2 (253-360)||(6363842-6363949)
chr2 (254-313)||(39490592-39490651)
chr2 (18-96)||(31204793-31204871)
chr2 (18-96)||(37245867-37245945)
chr2 (254-315)||(5144918-5144979)
chr2 (253-313)||(14383440-14383500)
chr2 (253-313)||(36527281-36527341)
chr2 (253-313)||(44280574-44280634)
chr2 (253-332)||(13151142-13151221)
chr2 (254-313)||(36209023-36209082)
chr2 (18-96)||(8855212-8855290)
chr2 (18-96)||(9072750-9072828)
chr2 (18-96)||(12858104-12858182)
chr2 (18-96)||(30819447-30819525)
chr2 (18-96)||(31185067-31185145)
chr2 (18-96)||(36855184-36855262)
chr2 (254-307)||(1308236-1308289)
chr2 (253-314)||(9118287-9118348)
chr2 (109-162)||(13151284-13151337)
chr2 (18-96)||(39432540-39432618)
chr2 (253-302)||(7585087-7585136)
chr2 (253-312)||(1072612-1072671)
chr2 (263-366)||(4279562-4279665)
chr2 (109-164)||(14151938-14151993)
chr2 (253-306)||(14151816-14151869)
chr2 (34-95)||(16218508-16218569)
chr2 (351-396)||(7584993-7585038)
chr2 (174-210)||(17928858-17928894)
[»] scaffold1905 (4 HSPs)
scaffold1905 (254-445)||(849-1041)
scaffold1905 (53-210)||(1088-1244)
scaffold1905 (12-96)||(138-222)
scaffold1905 (253-343)||(386-476)
[»] chr5 (53 HSPs)
chr5 (254-445)||(4218838-4219030)
chr5 (14-162)||(25670509-25670657)
chr5 (12-210)||(32363111-32363310)
chr5 (14-164)||(13479295-13479445)
chr5 (17-163)||(27405886-27406032)
chr5 (53-210)||(4219071-4219228)
chr5 (253-332)||(25670342-25670421)
chr5 (253-364)||(9958148-9958260)
chr5 (53-162)||(39008768-39008877)
chr5 (12-164)||(42804485-42804637)
chr5 (254-333)||(3455287-3455366)
chr5 (253-332)||(13479118-13479197)
chr5 (253-332)||(39239010-39239089)
chr5 (53-163)||(23089794-23089904)
chr5 (50-210)||(39238802-39238961)
chr5 (30-207)||(32973044-32973221)
chr5 (12-129)||(30644784-30644901)
chr5 (30-158)||(27945859-27945987)
chr5 (30-207)||(40892029-40892206)
chr5 (253-422)||(32362898-32363066)
chr5 (12-96)||(29616269-29616353)
chr5 (253-313)||(19241776-19241836)
chr5 (253-343)||(42804310-42804400)
chr5 (253-313)||(29616031-29616091)
chr5 (254-313)||(39008972-39009031)
chr5 (253-396)||(42318352-42318495)
chr5 (254-311)||(23090000-23090057)
chr5 (255-328)||(36571931-36572004)
chr5 (253-313)||(7651442-7651502)
chr5 (253-329)||(30644576-30644652)
chr5 (18-93)||(7827328-7827403)
chr5 (18-96)||(25033401-25033479)
chr5 (253-311)||(27405739-27405797)
chr5 (18-96)||(31011859-31011937)
chr5 (261-330)||(13592448-13592517)
chr5 (253-330)||(31007928-31008005)
chr5 (16-96)||(36609830-36609910)
chr5 (74-160)||(3455111-3455197)
chr5 (18-96)||(4580222-4580300)
chr5 (18-96)||(21367801-21367879)
chr5 (18-96)||(41152655-41152733)
chr5 (253-302)||(27946081-27946130)
chr5 (253-302)||(32972941-32972990)
chr5 (253-302)||(40892252-40892301)
chr5 (265-332)||(4938558-4938625)
chr5 (253-314)||(14279288-14279349)
chr5 (275-330)||(23648594-23648649)
chr5 (275-330)||(23809923-23809978)
chr5 (42-96)||(177392-177446)
chr5 (350-396)||(32972847-32972893)
chr5 (255-313)||(34528960-34529018)
chr5 (109-159)||(4938406-4938458)
chr5 (351-396)||(27946179-27946224)
[»] chr7 (48 HSPs)
chr7 (254-445)||(38352076-38352265)
chr7 (12-207)||(32749171-32749366)
chr7 (14-210)||(45549044-45549238)
chr7 (12-210)||(32126906-32127104)
chr7 (12-207)||(26815343-26815538)
chr7 (18-164)||(114900-115046)
chr7 (12-160)||(40690543-40690691)
chr7 (254-359)||(20354719-20354824)
chr7 (253-330)||(39770186-39770263)
chr7 (253-331)||(45548920-45548998)
chr7 (30-207)||(36521734-36521911)
chr7 (42-163)||(39769976-39770097)
chr7 (253-364)||(115143-115254)
chr7 (53-163)||(38351874-38351984)
chr7 (16-96)||(1939703-1939783)
chr7 (12-96)||(40300712-40300796)
chr7 (12-96)||(42881813-42881897)
chr7 (68-163)||(20354533-20354628)
chr7 (12-96)||(22660092-22660176)
chr7 (253-313)||(42882057-42882117)
chr7 (27-159)||(43201643-43201776)
chr7 (19-96)||(25218072-25218149)
chr7 (54-159)||(38970310-38970415)
chr7 (253-313)||(28317627-28317687)
chr7 (253-313)||(33508156-33508216)
chr7 (54-158)||(37952038-37952142)
chr7 (253-343)||(22660329-22660418)
chr7 (253-313)||(37952242-37952302)
chr7 (253-313)||(47158958-47159018)
chr7 (254-313)||(26815590-26815649)
chr7 (254-313)||(32749409-32749468)
chr7 (42-137)||(33508338-33508433)
chr7 (254-313)||(40690795-40690854)
chr7 (18-96)||(5813491-5813569)
chr7 (18-96)||(22194441-22194519)
chr7 (255-328)||(30567075-30567148)
chr7 (31-96)||(33078584-33078649)
chr7 (253-313)||(43201484-43201544)
chr7 (18-96)||(30630416-30630494)
chr7 (253-302)||(36521966-36522015)
chr7 (264-327)||(33078338-33078401)
chr7 (253-332)||(38970507-38970586)
chr7 (49-96)||(47159189-47159236)
chr7 (18-96)||(33379498-33379576)
chr7 (133-207)||(42881945-42882018)
chr7 (253-298)||(30720583-30720628)
chr7 (261-330)||(37888304-37888373)
chr7 (270-343)||(40300155-40300228)
[»] chr3 (80 HSPs)
chr3 (12-163)||(49027118-49027269)
chr3 (12-210)||(12975049-12975246)
chr3 (14-164)||(36178180-36178330)
chr3 (14-164)||(51304780-51304930)
chr3 (12-159)||(48886535-48886682)
chr3 (12-207)||(26162195-26162389)
chr3 (253-422)||(12975291-12975460)
chr3 (12-207)||(33187767-33187962)
chr3 (12-159)||(43475635-43475782)
chr3 (253-332)||(51999599-51999678)
chr3 (254-335)||(6833081-6833162)
chr3 (42-210)||(31169918-31170086)
chr3 (253-422)||(48886269-48886438)
chr3 (12-96)||(20139766-20139850)
chr3 (253-332)||(36178009-36178088)
chr3 (253-332)||(51305025-51305104)
chr3 (30-207)||(30415117-30415294)
chr3 (12-96)||(42564155-42564239)
chr3 (53-210)||(11908297-11908455)
chr3 (61-210)||(35471970-35472118)
chr3 (12-96)||(6045109-6045193)
chr3 (12-96)||(10424433-10424517)
chr3 (30-158)||(27847819-27847947)
chr3 (253-333)||(33187635-33187715)
chr3 (253-364)||(20140024-20140135)
chr3 (253-364)||(35540065-35540176)
chr3 (253-364)||(46136773-46136884)
chr3 (261-333)||(4873693-4873765)
chr3 (253-313)||(6044875-6044935)
chr3 (261-396)||(31169739-31169874)
chr3 (18-96)||(49086350-49086428)
chr3 (254-311)||(11908499-11908556)
chr3 (253-330)||(42564412-42564489)
chr3 (261-313)||(10424205-10424257)
chr3 (16-96)||(21228333-21228413)
chr3 (253-313)||(32119980-32120040)
chr3 (71-163)||(51999768-51999860)
chr3 (19-92)||(21229391-21229464)
chr3 (253-330)||(29702123-29702200)
chr3 (54-206)||(50415466-50415617)
chr3 (16-89)||(51974452-51974525)
chr3 (59-159)||(6832879-6832979)
chr3 (253-313)||(37182620-37182680)
chr3 (253-313)||(44084775-44084835)
chr3 (254-313)||(35471869-35471928)
chr3 (18-96)||(5844801-5844879)
chr3 (18-96)||(17469629-17469707)
chr3 (18-96)||(25787538-25787616)
chr3 (18-96)||(25829495-25829573)
chr3 (18-96)||(33751525-33751603)
chr3 (254-364)||(38571647-38571757)
chr3 (18-96)||(47147486-47147564)
chr3 (253-303)||(49026979-49027029)
chr3 (18-96)||(49822727-49822805)
chr3 (12-93)||(4873920-4874001)
chr3 (261-330)||(7008585-7008654)
chr3 (38-159)||(35540272-35540393)
chr3 (253-330)||(43475880-43475957)
chr3 (253-302)||(50415361-50415410)
chr3 (253-314)||(55027224-55027285)
chr3 (253-313)||(50734484-50734544)
chr3 (253-313)||(50778311-50778371)
chr3 (253-313)||(51998786-51998846)
chr3 (21-96)||(30688684-30688759)
chr3 (109-164)||(46136970-46137025)
chr3 (253-332)||(49406862-49406941)
chr3 (254-300)||(26162103-26162149)
chr3 (253-396)||(30414920-30415063)
chr3 (18-96)||(33936400-33936478)
chr3 (255-313)||(41183730-41183788)
chr3 (18-96)||(42598193-42598271)
chr3 (22-96)||(50034506-50034580)
chr3 (253-330)||(4046586-4046663)
chr3 (253-325)||(15007655-15007727)
chr3 (18-93)||(50020211-50020287)
chr3 (109-164)||(29701972-29702027)
chr3 (109-164)||(49407022-49407077)
chr3 (18-96)||(51435839-51435917)
chr3 (253-302)||(27848051-27848100)
chr3 (18-93)||(42602083-42602158)
[»] chr6 (32 HSPs)
chr6 (12-210)||(34242630-34242825)
chr6 (12-159)||(18642465-18642612)
chr6 (30-210)||(26653810-26653989)
chr6 (30-210)||(26759779-26759958)
chr6 (12-96)||(8222322-8222406)
chr6 (253-332)||(26653683-26653762)
chr6 (253-332)||(26759651-26759730)
chr6 (12-96)||(12502119-12502203)
chr6 (16-96)||(7540426-7540506)
chr6 (30-207)||(34841714-34841891)
chr6 (253-333)||(34242864-34242943)
chr6 (14-96)||(12513235-12513320)
chr6 (14-96)||(24115260-24115342)
chr6 (253-313)||(24348944-24349004)
chr6 (253-330)||(10886698-10886775)
chr6 (109-161)||(24348785-24348837)
chr6 (261-364)||(8222581-8222684)
chr6 (18-96)||(6377260-6377338)
chr6 (18-96)||(17958128-17958206)
chr6 (253-323)||(30446724-30446794)
chr6 (18-96)||(34328613-34328691)
chr6 (253-396)||(34841945-34842088)
chr6 (253-314)||(12502373-12502434)
chr6 (253-304)||(8668902-8668953)
chr6 (253-312)||(12513483-12513542)
chr6 (253-313)||(8675163-8675223)
chr6 (18-96)||(634895-634973)
chr6 (18-96)||(29951856-29951934)
chr6 (50-93)||(10886487-10886530)
chr6 (122-207)||(8668765-8668850)
chr6 (351-396)||(8669000-8669045)
chr6 (174-210)||(24348859-24348895)
[»] scaffold1454 (1 HSPs)
scaffold1454 (12-159)||(489-636)
[»] scaffold0004 (2 HSPs)
scaffold0004 (12-160)||(106054-106202)
scaffold0004 (254-313)||(106298-106357)
[»] scaffold0021 (2 HSPs)
scaffold0021 (254-364)||(109721-109832)
scaffold0021 (12-131)||(109945-110064)
[»] scaffold1183 (1 HSPs)
scaffold1183 (253-364)||(112-223)
[»] scaffold0007 (1 HSPs)
scaffold0007 (16-88)||(166175-166247)
[»] scaffold0015 (1 HSPs)
scaffold0015 (254-313)||(83463-83522)
[»] scaffold0758 (1 HSPs)
scaffold0758 (16-96)||(6498-6578)


Alignment Details
Target: chr4 (Bit Score: 165; Significance: 4e-88; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 253 - 445
Target Start/End: Complemental strand, 48403516 - 48403324
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  48403516 tatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacaactttatccacaatttttt 48403417  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    |||||||||| ||||||||||||||||||||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||||||||||    
T  48403416 ctctctccgcatccccctgccagcgacgcgccttgtcggcgcgtgtcccacacgcgcccagcttggcgaacggcgtcgcgccacgtgtcccct 48403324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 13094013 - 13093819
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||||||||||||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  13094013 tgttgataattgtagggattttggtagctaaatgagtaatcaaaagaattttgggtgttgaattgattattattgggatccattttattaaacaaagact 13093914  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||  ||||||||||    
T  13093913 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttga--tttttttctgtgtccaaatcaaatgatccaaatttctatttgta 13093819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 27864126 - 27864276
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  27864126 tgttgataattgtagggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaacaaagact 27864225  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  27864226 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttga 27864276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 14 - 210
Target Start/End: Original strand, 35809612 - 35809807
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  35809612 tgttgataattgtagggattttggtagctaaatgagtaatcagaaaaattttgggtgttgaattgattattattgggatccattttattaaacaaagact 35809711  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  35809712 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaagtttctatttgta 35809807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 9 - 210
Target Start/End: Complemental strand, 53347546 - 53347341
Alignment:
Q  9 tttggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattat---tattgggatccatgtggagtag 105  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||   ||||||||||||| |     |     
T  53347546 tttggtgttgataattgttgggattttggtagttaaatggataatcagaagaattttgggtgttgaattgattattattattgggatccatttcactaaa 53347447  T
Q  106 cagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa-tttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctcta 204  Q
     | ||||||||||||||||||||||| |||| |||||||||||||||||||||| || |          ||||||||||||||||||||||||  |||||    
T  53347446 taaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctcta 53347347  T
Q  205 tttgta 210  Q
    ||||||    
T  53347346 tttgta 53347341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 33607227 - 33607374
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| |     | || |||    
T  33607227 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgagatccatttcactaaacaaaga 33607326  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||||| |  | |||||||||||| |||||||||    
T  33607327 ctaaaacttcaaaagaaatgcttttaataagattaagatagtgaaaaa 33607374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 33609420 - 33609589
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||| ||||||||||||| |  ||    
T  33609420 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtgaagcaacacgtgtcactgctttatccacaactcatt 33609519  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    ||||||||||||   |||||  ||||||||||||||||||||||    |||||| |||| ||||||||||    
T  33609520 ctctctccgcgtattcctgcacgcgacgcgccttgtcggcgcgtgcctcacatgtgccctgcttggcaaa 33609589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 35809856 - 35809935
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35809856 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcac 35809935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 33523842 - 33524011
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |     || |||||||  ||||||| |||| |  ||    
T  33523842 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatcgtgaagcaacatgtgtcactactttatcgacaactcatt 33523941  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    ||||||||||||   ||||| |||||||||| |||||||||||| |  |||| |||||||||||||||||    
T  33523942 ctctctccgcgttttcctgcaagcgacgcgcgttgtcggcgcgtgtctcacacgcgcccagcttggcaaa 33524011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 158
Target Start/End: Complemental strand, 16171746 - 16171599
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||||||||| ||| |||||||||| |     |  | | |    
T  16171746 ggtgttgataattgttggtattttggtagctaaaagggtaatcagaagaattttgggtgttgaattgattgttagtgggatccatttcactaaataaata 16171647  T
Q  112 ctaaaacttcaaaagaaatg-ttaatgataagattaagagagtgaaaa 158  Q
    |||||||||||||||||||| | ||| |||||||||||||||||||||    
T  16171646 ctaaaacttcaaaagaaatgctaaataataagattaagagagtgaaaa 16171599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 13 - 160
Target Start/End: Complemental strand, 18469204 - 18469058
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagac 112  Q
    ||||||||| |||||||||||||| ||||||||| | || ||||||||||||| |||||||||||||||||||||  ||||||| |     | || ||||    
T  18469204 gtgttgata-ttgttgggattttgatagctaaattggtattcagaagaatttttggtgttgaattgattattattcagatccatttcactaaacaaagac 18469106  T
Q  113 taaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||||| |||||||||| |||| |||||||||||||||||||||||    
T  18469105 taaaactttaaaagaaatgctaataataagattaagagagtgaaaaat 18469058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 19273378 - 19273457
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||    
T  19273378 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaaaccacgtgtcac 19273457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 253 - 445
Target Start/End: Complemental strand, 16171506 - 16171314
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagcttt-atccacaattttt 351  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||  |     |||||||||||   ||| ||||| ||| | |    
T  16171506 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatcagattgcaccacgtgtcactctttttatccaaaatctct 16171407  T
Q  352 tctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    |||||||||||||  || ||||||| ||||||| ||||||||||| |  | || |||||||||||||| |||||| ||||||||||||||||||    
T  16171406 tctctctccgcgtaacc-tgccagccacgcgccctgtcggcgcgtgtaacgcacgcgcccagcttggcgaacggcatcgcgccacgtgtcccct 16171314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 28447458 - 28447539
Alignment:
Q  15 gttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| ||||||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||||    
T  28447458 gttgataattgttggggttttggtagctaaattggtaatcagaagaattttgggtgttgaattgattattattgggatccat 28447539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 89
Target Start/End: Original strand, 28901325 - 28901402
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgg 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  28901325 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattgttattgg 28901402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 28901165 - 28901249
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||||| |||||| ||||||||| ||||||||||||||| ||||||||||||||    
T  28901165 ggtgttgataattgtttggattttggtagctaaatgggtaatcataagaattttgggtgttgaattgattgttattgggatccat 28901249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 13093777 - 13093698
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  13093777 tatttgctatgaaataattgaatccaaattattaagaaaataaaaatccaaacagccaatcgtaacaagccacgtgtcac 13093698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 13 - 96
Target Start/End: Complemental strand, 34434392 - 34434310
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  34434392 gtgttgataattgttgaaattt-ggtagctaaatggataatcagaagaattttgggtgttgaattgattattattgggatccat 34434310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 3615082 - 3614905
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  3615082 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 3614983  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  3614982 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 3614905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 49 - 163
Target Start/End: Complemental strand, 17329720 - 17329606
Alignment:
Q  49 ataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaag 148  Q
    ||||||||||||||||| ||||||||||||||||||||| |||| ||| |     | || ||||||||||||||||||||||| |||| |||||||||||    
T  17329720 ataatcagaagaattttgggtgttgaattgattattatttggattcatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaag 17329621  T
Q  149 agagtgaaaaatttg 163  Q
    |||||||||||||||    
T  17329620 agagtgaaaaatttg 17329606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 163
Target Start/End: Complemental strand, 48403724 - 48403603
Alignment:
Q  42 taaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataa 141  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||||||| |     | |||||||||||||||||||||||||  |||| ||||    
T  48403724 taaatgggtaatcagaagaattttggatgttgaattgattattattgggatccattttactaaacagagactaaaacttcaaaagaaatactaataataa 48403625  T
Q  142 gattaagagagtgaaaaatttg 163  Q
     |||||||||||| ||||||||    
T  48403624 aattaagagagtgtaaaatttg 48403603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 19273172 - 19273331
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||| |     | || | |||||||||||||||||||||  ||| ||||||||||||    
T  19273172 taatcagaagaattttgggtgttgaattgattattattgggattcattttactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaaga 19273271  T
Q  150 gagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  19273272 gagtgaaaaatttga-tttttattctgtgtccaaatcaaatgatccaagtttctatttgta 19273331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 23539533 - 23539449
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| ||| ||||||||||    
T  23539533 ggtgttgataattgttgggattttggtagttaaatgggtaataagaagaattttgggtgttgaattgattgttactgggatccat 23539449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 27864373 - 27864452
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||| || |||||||    
T  27864373 tatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagtcatgtgtcac 27864452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 33077474 - 33077384
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||| | |||||||    
T  33077474 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtcacaacattatcca 33077384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 34199118 - 34199036
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  34199118 tgttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 34199036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 3530120 - 3530036
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  3530120 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 3530036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 8994964 - 8995048
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  8994964 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 8995048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 34463400 - 34463316
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||  | ||||||||| |||||| ||||||||||||||| ||| ||||||||||    
T  34463400 ggtgttgataattgttgggattttggtagctaaaatggtaatcagaataattttgggtgttgaattgattgttagtgggatccat 34463316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 13 - 96
Target Start/End: Original strand, 13113743 - 13113826
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||  | |||||| ||||||||| ||||||||||||||| ||| ||||||||||    
T  13113743 gtgttgataattgttgggattttggtagctaaaatggtaatcataagaattttgggtgttgaattgattgttagtgggatccat 13113826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 396
Target Start/End: Complemental strand, 53347304 - 53347161
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |    ||||||||  |||||||||||| |     ||    
T  53347304 tatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatcgtgaagcaccacgtgtggcagctttatccaaacaacctt 53347205  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||| ||||| |  |||| ||| |||||||||||    
T  53347204 ctctctccgcgtccacctgctacagacgtgccctgtcggcgcgt 53347161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 3529863 - 3529803
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3529863 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 3529803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 8995222 - 8995282
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8995222 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 8995282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 34198861 - 34198801
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  34198861 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 34198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 40721473 - 40721533
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40721473 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 40721533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 28447684 - 28447795
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| ||||||||  ||||||||| |||||||||||||||||| ||||  |||| |||||||||||| ||   |||    
T  28447684 tatttgcaatgaaataattgagtccaaagtattaagataataaaaatcgaagcagccaatcgtaacatgccaaatgtcccagctttatccaaaacacttt 28447783  T
Q  353 ctctctccgcgt 364  Q
    ||||||| ||||    
T  28447784 ctctctctgcgt 28447795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 67 - 160
Target Start/End: Original strand, 4981935 - 4982028
Alignment:
Q  67 ggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||| ||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  4981935 ggtgttaaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaat 4982028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 12 - 65
Target Start/End: Original strand, 33523648 - 33523701
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaatttt 65  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33523648 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaatttt 33523701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 18468960 - 18468908
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  18468960 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 18468908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 33077721 - 33077637
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||| |  ||||||||| || ||| ||||||||||||||| ||| || |||||||    
T  33077721 ggtgttgataattgttgggattttggtagctaaaagtgtaatcagaaaaaattttggtgttgaattgattgttagtgtgatccat 33077637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 38174004 - 38174064
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  38174004 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagtcaatc 38174064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 56054709 - 56054787
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtca 331  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||  |||||| |||||    
T  56054709 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaatcagccacatgtca 56054787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 23539281 - 23539204
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||| ||||||||||| | ||| |||||||||||    
T  23539281 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatctaagcagccaattgaaaccagccacgtgtc 23539204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 31336146 - 31336069
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||||||||||| |||||| | ||||||||| |||||||||||||| ||| |||||||||||    
T  31336146 tatttgcaatgaaataattgagtccaaaatattaaaatgataaaaattcaagcagccaatcgaaaccagccacgtgtc 31336069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 261 - 366
Target Start/End: Complemental strand, 34434151 - 34434046
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttctctctcc 360  Q
    |||||||| ||||||||||| ||||||||  ||||||||| |||||||||||||||||| |||| ||||| | || ||||||| ||   ||||||||| |    
T  34434151 atgaaataattgagtccaaaatattaagataataaaaatctaagcagccaatcgtaacatgccaagtgtccctgcattatccaaaaaaatttctctcttc 34434052  T
Q  361 gcgtcc 366  Q
    ||||||    
T  34434051 gcgtcc 34434046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 52018111 - 52018188
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||| |||||||||||||  |||| |||| |||||    
T  52018111 tatttgcaatgaaataattgagtccaaattattgagaagataaaaattcaagcagccaatcaaaacatgccaagtgtc 52018188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 23389575 - 23389515
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||||||||||| |||||    
T  23389575 tatttgcaatgaaataattgagtccaaataattaagaagataaaaatccaagcagtcaatc 23389515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2212203 - 2212125
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  2212203 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 2212125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 19409695 - 19409773
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||  |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  19409695 gataattgttgggattttcgtagttaaatgagtaattagaataattttgggtgttgaaatggttattattgggatccat 19409773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 23389726 - 23389625
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttg 208  Q
    |||||||||||||||||||||   |||| ||||||||||||||||||||| ||||          ||||||||||||||||||||||||  |||||||||    
T  23389726 agactaaaacttcaaaagaaactctaataataagattaagagagtgaaaattttggtttttttttctgtgtccaaatcaaatgatccaagtctctatttg 23389627  T
Q  209 ta 210  Q
    ||    
T  23389626 ta 23389625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 109 - 207
Target Start/End: Original strand, 38173858 - 38173955
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||| ||||         ||||||||||||||||||||||||  ||||||||    
T  38173858 agactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttga-ttttttttctgtgtccaaatcaaatgatccaagtctctattt 38173955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 46914397 - 46914319
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  46914397 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 46914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 53181339 - 53181261
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  53181339 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 53181261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 28901576 - 28901637
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| |||||| |||| |||||||| ||||||||||||||||||||||||    
T  28901576 tatttgcaatgaaataattgagtgcaaaatattaagatgataaaaatccaagcagccaatcg 28901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 48506204 - 48506143
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  48506204 tatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 48506143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 3614852 - 3614800
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagc 305  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  3614852 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 3614800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 34463146 - 34463086
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||| || |||||||||    
T  34463146 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatcgaaacagccaatc 34463086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 56054468 - 56054547
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||| ||||||||||| |||||||||||||||||| ||||     ||||||| ||||||||||||||| ||| ||||||||||    
T  56054468 ggtgttcataattgttggaattttggtagctaaatgggtaat-----gaattttgggtgttgaattgattgttagtgggatccat 56054547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 45081233 - 45081182
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||||||||||||||||| || |||| |||||||||||||||||||||||    
T  45081233 agactaaaacttcaaaagaattgctaattataagattaagagagtgaaaaat 45081182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 261 - 303
Target Start/End: Complemental strand, 17329508 - 17329466
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaa 303  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  17329508 atgaaataattgagtccaaattattaagaagataaaaatccaa 17329466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 21654710 - 21654632
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  21654710 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 21654632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 47749935 - 47749857
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| | |||| ||||||||| |  |||||||||||||||||    
T  47749935 gataattgttgggattttcgtagttaaatgggtaattagaaaatttttgggtgttgaaatagttattattgggatccat 47749857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 52773354 - 52773431
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||  |||||||||||||||||||||||||| | |||||||||||  |||| |||| |||||    
T  52773354 tatttgcaatgaaataattaggtccaaattattaagaagataaaaattcgagcagccaatcaaaacatgccaagtgtc 52773431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 55549662 - 55549602
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||| | ||||| |||||    
T  55549662 tatttgcaatgaaataattgggtccaaattattaagaagataaaaattcgagcagtcaatc 55549602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 4982121 - 4982180
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||| |  |||||||||    
T  4982121 atttgcaatgaaataattgaatccaaattattaagaagataaaaatcgagccagccaatc 4982180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 13113990 - 13114064
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||| ||||||||||||||||   |||||||||||||||||||||  |||| |||| |||||    
T  13113990 tatttgcaatgaaataattgggtccaaattattaaga---taaaaatccaagcagccaatcaaaacatgccatgtgtc 13114064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 33523712 - 33523762
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    ||||||||||||||||||||||| |  | ||||||||||||||||||||||    
T  33523712 agactaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaa 33523762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 16021309 - 16021369
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| || ||||| ||| || ||||||||||| ||||||||||||||||||| |||||    
T  16021309 tatttgcaataaaataattgggttcaaattattaaaaagataaaaatccaagcagtcaatc 16021369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 3614755 - 3614709
Alignment:
Q  350 tttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  3614755 tttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 3614709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Original strand, 6309134 - 6309180
Alignment:
Q  350 tttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  6309134 tttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 6309180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 4e-85; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 254 - 445
Target Start/End: Original strand, 23550210 - 23550401
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23550210 atttgcaatgaaataattgagtctaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 23550309  T
Q  354 tctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    ||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| |||||||||||||||||||||||||    
T  23550310 tctctccgcgtccccctgccagcgacgcgccttgtcgacgcgtgtcccacatgcgcccagcttggcgaacggcgtcgcgccacgtgtcccct 23550401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 14 - 163
Target Start/End: Original strand, 13947683 - 13947832
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  13947683 tgttgataattgttgggattttggtagctaaatgggtaatcagaagaatttttggtgttgaattgattattattgggatccatttcactaaacaaagact 13947782  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    |||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  13947783 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttg 13947832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 160
Target Start/End: Complemental strand, 1633269 - 1633121
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| |     | || |||    
T  1633269 ggtgttgataattgttgggattttgatagctaaatggataatcagaagaattttgggtgttaaattgattattgttgggatccatttcactaaacaaaga 1633170  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  1633169 ctaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaat 1633121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 13784042 - 13783891
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |     | || | |    
T  13784042 ggtgttgataattgttgggattttggtagctaaatgagtaatcagaagaattttaggtgttgaattgattattattgggatccatttcactaaacaaaaa 13783943  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||| |||||||||||||||| |||| |||| |||||||||||||||| ||||    
T  13783942 ctagaacttcaaaagaaatgctaataataaaattaagagagtgaaaattttg 13783891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 16 - 153
Target Start/End: Complemental strand, 30529495 - 30529358
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaa 115  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| |    ||  | |||||||    
T  30529495 ttgataattgttgggattttggtagctaaataggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcacttaataaagactaa 30529396  T
Q  116 aacttcaaaagaaatgttaatgataagattaagagagt 153  Q
    |||||||||||||||| |||| ||||||||||||||||    
T  30529395 aacttcaaaagaaatgctaataataagattaagagagt 30529358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 43524101 - 43524020
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43524101 ggtgttgataattgttgggattttggtaggtaaatggataatcagaagaattttgggtgttgaattgattattattgggatc 43524020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 26245093 - 26245172
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26245093 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcac 26245172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 40284070 - 40284149
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  40284070 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcac 40284149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 44503731 - 44503900
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |     |||||||||| |||||| |||||| |  ||    
T  44503731 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtgaagcaacacgtgtcactgctttacccacaactcatt 44503830  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    |||||||||| |   ||||| || ||||||| |||||||| ||| |  ||||  ||||||||||||||||    
T  44503831 ctctctccgcattttcctgctagtgacgcgcgttgtcggcacgtgtctcacacacgcccagcttggcaaa 44503900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 26244885 - 26245044
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |     | || | |||||||||||||||||||||  ||| ||||||||||||    
T  26244885 taatcagaagaattttgggtgttgaattgattattattgggatccattttactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaaga 26244984  T
Q  150 gagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  26244985 gagtgaaaaatttga-tttttattctgtgtccaaatcaaatgatccaagtttctatttgta 26245044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 38205081 - 38204997
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||| ||||||||    
T  38205081 ggtgttgataattgttgggattttggtagctaaatggataatcaaaagaattttggatggtgaattgattattattaggatccat 38204997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 40283863 - 40284022
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||| |     | || |||||||||||| |||||||||| |||| ||||||||||||    
T  40283863 taatcagaagaattttgggtgttgaattaattattattgggatccattttcctaaacaaagactaaaactttaaaagaaatgctaataataagattaaga 40283962  T
Q  150 gagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  40283963 gagtgaaaaatttga-tttttattctgtgtccaaatcaaatgatccaagtttctatttgta 40284022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 44150158 - 44150268
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||| ||| |||||||||||||||||||||||||||||| |  |  | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  44150158 tcagaagaactttgggtgttgaattgattattattgggatccatttcaataaacaaagactaaaacttcaaaagaaatgctaataataagattaagagag 44150257  T
Q  153 tgaaaaatttg 163  Q
    |||||| ||||    
T  44150258 tgaaaattttg 44150268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 158
Target Start/End: Complemental strand, 1955084 - 1954956
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  1955084 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 1954985  T
Q  130 tgttaatgataagattaagagagtgaaaa 158  Q
    || |||| |||||||||||||||||||||    
T  1954984 tgctaataataagattaagagagtgaaaa 1954956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 15056792 - 15056876
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  15056792 ggtgttgataattgttgggattttggtagttaaaagggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 15056876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 29731939 - 29732098
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| ||||||||||||    
T  29731939 taattagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaaga 29732038  T
Q  150 gagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||| |||         ||||||||||||||||||||| ||  |||||||||||    
T  29732039 gagtgaaaaatatga-ttttttttctgtgtccaaatcaaatgatcaaagtctctatttgta 29732098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 13947899 - 13947978
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  13947899 tatttgttatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgtaacgcgccacgtgtcac 13947978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 15057049 - 15057139
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||||| | |||||||    
T  15057049 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtcacaacattatcca 15057139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 23550002 - 23550111
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||  |||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  23550002 tcagaagaatttg-ggtgttgaattgattattattgggatccatttcactaatcaaagactaaaacttcaaaagaaatgctaataataagattaagagag 23550100  T
Q  153 tgaaaaatttg 163  Q
    |||||||||||    
T  23550101 tgaaaaatttg 23550111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 256 - 343
Target Start/End: Complemental strand, 31129060 - 31128973
Alignment:
Q  256 ttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    |||| |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||   |||| ||||| ||||||||||||    
T  31129060 ttgcaatgaaataattgagtccaaattattaagatgataaaaatccaagcagccaatcgtaatctgccaagtgtcccagctttatcca 31128973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 27392687 - 27392767
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  27392687 ttgataattgttgggattttggtagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 27392767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 13783798 - 13783679
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| || | ||||||||||||||||||||||||||||| ||||||||| | | |  |||||||||||||||||||||| |     ||    
T  13783798 tatttgcaatgaaataatttaatccaaattattaagaagataaaaatccaaccagccaatcatgaaagaccacgtgtcacagctttatccaaacaacctt 13783699  T
Q  353 ctctctccgcgtccccctgc 372  Q
    |||||||||||||| |||||    
T  13783698 ctctctccgcgtccacctgc 13783679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 372
Target Start/End: Complemental strand, 30529262 - 30529143
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||| ||||||||||||| ||||||| |||| || |    |||||||||||||||||||||| |     ||    
T  30529262 tatttgcaatgaaataattgagtccaaattatttagaagataaaaattcaagcagtcaattgtgaagcaccacgtgtcacagctttatccaaacaacctt 30529163  T
Q  353 ctctctccgcgtccccctgc 372  Q
    ||||||||||||||||||||    
T  30529162 ctctctccgcgtccccctgc 30529143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 44150349 - 44150408
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44150349 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 44150408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 29732149 - 29732208
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||||||||    
T  29732149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatc 29732208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 36912781 - 36912859
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  36912781 gataattgttgggattttcgtagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 36912859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 49 - 159
Target Start/End: Original strand, 44503518 - 44503628
Alignment:
Q  49 ataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaag 148  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||| |     | || | | ||||||||||||||||||| |  | |||||||||||    
T  44503518 ataatcagaagaattttgggtgttgaattgattattattgagatccatttcactaaacaaatattaaaacttcaaaagaaatgcttttaataagattaag 44503617  T
Q  149 agagtgaaaaa 159  Q
    |||||||||||    
T  44503618 agagtgaaaaa 44503628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 13497731 - 13497808
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||||||||| | |||||||| |||||||||||||||||||||||| |||  ||||||||||    
T  13497731 tatttgcaatgaaataattgagtccagaatattaagatgataaaaatccaagcagccaatcgaaacgcgccacgtgtc 13497808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 38204879 - 38204819
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  38204879 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaacgagccaatc 38204819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 45100628 - 45100568
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  45100628 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 45100568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 8449893 - 8449815
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  8449893 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 8449815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 13817264 - 13817342
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||  ||| || ||||||||| |||| |||||| ||||||||| || |||||||||||||||||    
T  13817264 gataattgttgggattttcatagttatatggataattagaaaaattttgggtgttgaaatggttattattgggatccat 13817342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 35101610 - 35101688
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  35101610 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 35101688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Complemental strand, 7511367 - 7511306
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  7511367 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagtagccaatcg 7511306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 302
Target Start/End: Complemental strand, 1633024 - 1632976
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  1633024 atttgcaatgaaataattgagtccaaattattaagaagataaaaatcca 1632976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 254 - 306
Target Start/End: Complemental strand, 43523874 - 43523822
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagca 306  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  43523874 atttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagca 43523822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 17744791 - 17744866
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    |||||||||||||||||| |||| |||||| || || |||| |||||| ||||||||| || ||||||||||||||    
T  17744791 gataattgttgggattttcgtagttaaatgaattattagaataattttgggtgttgaaatggttattattgggatc 17744866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 35932323 - 35932466
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||| ||  |||||||||  ||     |||||||||    |||||||| ||| | ||    
T  35932323 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaattcagccagccaatcacaattcaacacgtgtcagccttttatccaaaatctctt 35932422  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||  |||    ||||||||||||||||||||||    
T  35932423 ctctctccgcgtcttcctttgcgcgacgcgccttgtcggcgcgt 35932466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 396
Target Start/End: Complemental strand, 1954858 - 1954715
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaag-cagccaatcgtaacaagccacgtgtcacagc-tttatccacaatttt 350  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||| | ||||||| |  |  |||| ||| ||  |||| | |||||| ||   |    
T  1954858 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaggccagccaacc--agaaagcgacgcgtggcagcatctatccaaaacagt 1954761  T
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  1954760 ttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 1954715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 26748818 - 26748738
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgt 98  Q
    ||||||||||||||||||   || ||||||| |||| |||| || ||| ||||||||| || |||||||||||||||||||    
T  26748818 gataattgttgggattttcaaagttaaatgggtaattagaaaaaatttgggtgttgaaatggttattattgggatccatgt 26748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 207
Target Start/End: Complemental strand, 31129204 - 31129108
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    ||||||||||||||||||||| | |||  |||||||||||||||||||||| |||          ||||||||||||||||||||||||  ||||||||    
T  31129204 agactaaaacttcaaaagaaaagctaa--ataagattaagagagtgaaaaacttgggttttttttctgtgtccaaatcaaatgatccaagtctctattt 31129108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 12272069 - 12272010
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaat 312  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||| ||||    
T  12272069 tatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 12272010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 42860385 - 42860430
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaa 298  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||    
T  42860385 tatttgcaatgaaataattgggtccaaattattaagaagataaaaa 42860430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Original strand, 5736493 - 5736562
Alignment:
Q  262 tgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtca 331  Q
    ||||||| ||||||  |||||||||||| ||||||||||||  |||||||||  ||  ||||||||||||    
T  5736493 tgaaataattgagttgaaattattaagatgataaaaatccagacagccaatcagaatcagccacgtgtca 5736562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 262 - 331
Target Start/End: Complemental strand, 34954931 - 34954862
Alignment:
Q  262 tgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtca 331  Q
    ||||||| ||||||  |||||||||||| ||||||||||||  |||||||||  ||  ||||||||||||    
T  34954931 tgaaataattgagttgaaattattaagatgataaaaatccagacagccaatcagaatcagccacgtgtca 34954862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 13783877 - 13783841
Alignment:
Q  174 ctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  13783877 ctgtgtccaaatcaaatgatccaagtctctatttgta 13783841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 156; Significance: 1e-82; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 254 - 445
Target Start/End: Original strand, 45363941 - 45364132
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    ||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||    
T  45363941 atttgctatgaaataattgagttcaaattattaagaagataaaaatccaagcagtcaatcgtaacaaaccacgtgtcacagctttatccataattttttc 45364040  T
Q  354 tctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| |||||||||    
T  45364041 tctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtatcccacatgcgcccaacttggcaaacggcgtcgggccatgtgtcccct 45364132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 29524120 - 29524271
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| ||| |     | || |||    
T  29524120 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgggatacatttcactaaacaaaga 29524219  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
     ||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  29524220 ttaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttg 29524271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 45363698 - 45363849
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||| |     | || |||    
T  45363698 ggtgttgataattgttgggattttggtagctaaatgggtaatctgaagaattttgggtgttgaatttattattattgggatccatttcactaaacaaaga 45363797  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  45363798 ctaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttg 45363849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 33167432 - 33167587
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattg---attattattgggatccatgtggagtagcag 108  Q
    ||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||||||||||   |||||||||||||||||| |     | ||     
T  33167432 ggtgttgataattgttgggatttcggtagctaaatgggtaatcaaaagaattttgggtgttgaattgattattattattgggatccatttcactaaacaa 33167531  T
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33167532 agactaaaacttcaaaagaaatgttaataataagattaagagagtgaaaaatttga 33167587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 51156535 - 51156341
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||| ||||||| |     | || |||    
T  51156535 ggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattgattattattgagatccatttcactaaacaaaga 51156436  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||         ||||||||||||||||||||||||  ||||||||    
T  51156435 ctaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatga-ttttttttctgtgtccaaatcaaatgatccaagtctctattt 51156341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 8471433 - 8471627
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||| ||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||| |||||||| |     |  | |||    
T  8471433 ggtgttgataattattggggttttggtagctaaatgggtaattagaagaattttgggtgttgaattgattgttatt-ggatccatttcactaaataaaga 8471531  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||  ||||||||    
T  8471532 ctaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 8471627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 47297441 - 47297291
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagac 112  Q
    ||||||||||||||||||||||||||||| |||||  |||||||||||||||| ||||||||||||||| |||||| ||||||| |     |  | ||||    
T  47297441 gtgttgataattgttgggattttggtagccaaatgagtaatcagaagaattttgggtgttgaattgattgttattgagatccatttcactgaataaagac 47297342  T
Q  113 taaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||||||||||||||||| | |||| ||||||||||||||||||||||||||    
T  47297341 taaaacttcaaaagaaaagctaataataagattaagagagtgaaaaatttg 47297291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 16 - 159
Target Start/End: Original strand, 51523490 - 51523633
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaa 115  Q
    ||||||||||||||||||||||||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||| |     |  | |||||||    
T  51523490 ttgataattgttgggattttggtagctaaatgggtaatcataaaaattttgggtgttgaattgattattattgggatccatttcactaaataaagactaa 51523589  T
Q  116 aacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||| | |||| | ||||||||||||||||||||    
T  51523590 aacttcaaaagaaaagctaataaaaagattaagagagtgaaaaa 51523633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 17676204 - 17676127
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgg 89  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||    
T  17676204 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattgttattgg 17676127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 29524363 - 29524506
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||| ||||||||||| |    |||||||||||||||||||||| |     ||    
T  29524363 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaccagccaatcgtgaagcaccacgtgtcacagctttatccaaacaacctt 29524462  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||| || ||||| |  |||||||| |||||||||||    
T  29524463 ctctctccgcgcccacctgcaacagacgcgccctgtcggcgcgt 29524506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 2474957 - 2474780
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  2474957 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 2474858  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  2474857 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 2474780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 14 - 96
Target Start/End: Complemental strand, 18317680 - 18317598
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| || ||||||||||||||||||||    
T  18317680 tgttgataattgttgggattttggtagctaaatgggtaatcagaagaattctgggtgtttaaatgattattattgggatccat 18317598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 50 - 163
Target Start/End: Complemental strand, 45455718 - 45455605
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||||||| |||    
T  45455718 taatcaaaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagatttaga 45455619  T
Q  150 gagtgaaaaatttg 163  Q
    ||||||||||||||    
T  45455618 gagtgaaaaatttg 45455605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 31159642 - 31159726
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||| ||| ||||||||||    
T  31159642 ggtgttgataattgttgggattttggtagctaaaatgataatcggaagaattttgggtgttgaattgattgttagtgggatccat 31159726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 15 - 159
Target Start/End: Original strand, 36231138 - 36231281
Alignment:
Q  15 gttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagacta 114  Q
    |||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||||| || || |||||||||||||| |     |  | ||||||    
T  36231138 gttgataattgttgggattttggtagctaaatgggtaatttgaagaattttgggtgttgaactg-ttgttattgggatccatttcactaaataaagacta 36231236  T
Q  115 aaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||   |||| ||||||||||||||||||||||    
T  36231237 aaacttcaaaagaaaaactaataataagattaagagagtgaaaaa 36231281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 47297202 - 47297122
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||    
T  47297202 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtcaca 47297122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 48385040 - 48384956
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  48385040 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 48384956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 10265580 - 10265503
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||| ||| |||||||||||    
T  10265580 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccacgtgtc 10265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 48384781 - 48384721
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  48384781 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 48384721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 263 - 333
Target Start/End: Complemental strand, 30878230 - 30878160
Alignment:
Q  263 gaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| | || ||||||||    
T  30878230 gaaataattgagtccaaattattaagaagataaaaacccaagcagccaatcgtaacatgtcaagtgtcaca 30878160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 254 - 332
Target Start/End: Complemental strand, 51156300 - 51156222
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||| |||||||| |||||||||||||||||||||||||||  | |||||| |||||||||||||| ||||||||||    
T  51156300 atttgcaatgaaataattgagtccaaattattaagaagataaattttcaagcaaccaatcgtaacaaggcacgtgtcac 51156222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 45455513 - 45455453
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  45455513 tatttgcaatgaaataattgagtccaaattattaagaagaaaaaaatccaagcagccaatc 45455453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 265 - 343
Target Start/End: Complemental strand, 17675913 - 17675834
Alignment:
Q  265 aatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagc-tttatcca 343  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||  |||| |||| |||||||||| ||||||||    
T  17675913 aataattgagtccaaattattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtcacagcatttatcca 17675834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 31159891 - 31159950
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  31159891 atttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 31159950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 51523720 - 51523831
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||| | |||||| |||| |||||||| |||||||||| |||||||||||||||||| |  | ||||| |||||||||||| ||   |||    
T  51523720 tatttgcaatgaaaaaattgagtacaaaatattaagatgataaaaatcgaagcagccaatcgtaacatgttaagtgtcccagctttatccaaaacacttt 51523819  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  51523820 ctctctccgcgt 51523831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 33167677 - 33167767
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| || |||| |||||||||||||||||||||||||| ||||||||||| |     |||||||||||||||||||||    
T  33167677 tatttgcaatgaaataattaagtctaaattattaagaagataaaaatccaaccagccaatcgtgaagcatcacgtgtcacagctttatcca 33167767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 37822920 - 37822974
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  37822920 agactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttg 37822974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 331
Target Start/End: Original strand, 43739490 - 43739568
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtca 331  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||||||||||| |||  |||||||||||    
T  43739490 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaacgcgccacgtgtca 43739568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 52930551 - 52930477
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggat 92  Q
    |||||||||||||||||| |||| |||||||||||| |||| |||||| ||||||||| || |||||||||||||    
T  52930551 gataattgttgggattttcgtagttaaatggataattagaaaaattttgggtgttgaaatggttattattgggat 52930477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 36231383 - 36231460
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| |||||| |||| |||||||| |||||||||||||||||||||||| |||  ||||||||||    
T  36231383 tatttgcaatgaaataattgagttcaaaatattaagatgataaaaatccaagcagccaatcgaaacgcgccacgtgtc 36231460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 37823067 - 37823127
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||    
T  37823067 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatctaagcagtcaatc 37823127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 45623134 - 45623074
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  45623134 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 45623074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 12 - 91
Target Start/End: Original strand, 48407579 - 48407658
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattggga 91  Q
    ||||||||||||||||||||||||||||| |||| || ||||||||| | |||| ||||||||||| ||| ||| |||||    
T  48407579 ggtgttgataattgttgggattttggtagttaaaagggtaatcagaaaatttttgggtgttgaattaattgttagtggga 48407658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 31471401 - 31471479
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  31471401 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 31471479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 37420083 - 37420005
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  37420083 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 37420005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 45242265 - 45242343
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  45242265 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 45242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 305
Target Start/End: Complemental strand, 2474727 - 2474675
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagc 305  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||||||    
T  2474727 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaagc 2474675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 14097156 - 14097216
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||| ||||||    
T  14097156 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcaaccaatc 14097216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 29919829 - 29919889
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| || ||||||||    
T  29919829 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagtagccaatc 29919889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 210
Target Start/End: Complemental strand, 30878420 - 30878287
Alignment:
Q  75 attgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnc 174  Q
    |||||||||||||||||||||| |     || | |||||||||||||||||||||   |||| |||||||||||||||||||||| |||          |    
T  30878420 attgattattattgggatccatttcactaagtaaagactaaaacttcaaaagaaaatctaataataagattaagagagtgaaaaacttg--gtttttttc 30878323  T
Q  175 tgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||||||||  |||||||||||    
T  30878322 tgtgtccaaatcaaatgatccaagtctctatttgta 30878287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 37690901 - 37690841
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||| |||||    
T  37690901 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatc 37690841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 51494076 - 51494016
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||| |||||    
T  51494076 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagtcaatc 51494016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 8471675 - 8471752
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||||| ||| ||| |||||| |||  ||||||||||    
T  8471675 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaacagtcaatcgaaacgcgccacgtgtc 8471752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 300
Target Start/End: Complemental strand, 19578524 - 19578477
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatc 300  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||    
T  19578524 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatc 19578477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 17786458 - 17786536
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||  ||| ||||||| |||| | || |||||| ||||||||| || |||||||| ||||||||    
T  17786458 gataattgttgggattttcatagttaaatgggtaattaaaaaaattttgggtgttgaaatggttattatttggatccat 17786536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 27630199 - 27630121
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||| | |||| |||| ||||||   ||||||| || |||||||||||||||||    
T  27630199 gataattgttgggattttcgtagttaaataggtaattagaataattttgtttgttgaaatggttattattgggatccat 27630121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 36303329 - 36303387
Alignment:
Q  38 tagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||  |||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  36303329 tagctaaatgattaattagaagaattctagatgttgaaatgattattattgggatccat 36303387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 96
Target Start/End: Original strand, 48729669 - 48729727
Alignment:
Q  38 tagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||  |||| ||||||||| ||| ||||||| ||||||||||||||||||||    
T  48729669 tagctaaatgattaattagaagaattctagatgttgaaatgattattattgggatccat 48729727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 96
Target Start/End: Original strand, 48927133 - 48927174
Alignment:
Q  55 agaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||| ||||||||| ||||||||||||||||||||    
T  48927133 agaagaattttgggtgttgaaatgattattattgggatccat 48927174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 292
Target Start/End: Complemental strand, 17675952 - 17675913
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaaga 292  Q
    ||||||| |||||||| |||||||||||||||||||||||    
T  17675952 tatttgcaatgaaataattgagtccaaattattaagaaga 17675913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 2474630 - 2474584
Alignment:
Q  350 tttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  2474630 tttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 2474584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 164
Target Start/End: Original strand, 43739357 - 43739403
Alignment:
Q  118 cttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||| | |||| |||||||||||||||||||||| ||||    
T  43739357 cttcaaaagaaaagctaataataagattaagagagtgaaaaacttga 43739403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 29524285 - 29524321
Alignment:
Q  174 ctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  29524285 ctgtgtccaaatcaaatgatccaagtctctatttgta 29524321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 45363862 - 45363898
Alignment:
Q  174 ctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  45363862 ctgtgtccaaatcaaatgatccaagtctctatttgta 45363898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 147; Significance: 2e-77; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 253 - 446
Target Start/End: Complemental strand, 7762799 - 7762605
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtg-tcacagctttatccacaattttt 351  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  7762799 tatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcagtcaatcgtaacaagccacgtggtcacagctttatccacaattttt 7762700  T
Q  352 tctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtccccta 446  Q
    |||||||||  |||||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  7762699 tctctctccatgtccccctgccagcgacgcgccttgtcggcgcttatcccacacgcgcccagcttagcaaatggcgtcgcgccacgtgtccccta 7762605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 262 - 445
Target Start/End: Original strand, 17486269 - 17486453
Alignment:
Q  262 tgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttctctctccg 361  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||||    
T  17486269 tgaaataattgagtccaaattattaagaagataaaaattcaagcagccaattgtaacaaaccacgtgtcacaactttatccacaattttttctctctccg 17486368  T
Q  362 cgt-ccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    ||| ||||| |||||| ||| ||||||||||||||| | ||||| ||||||| |||||| |||||||||||||||||||||||||    
T  17486369 cgtcccccccgccagcaacgggccttgtcggcgcgtgtcccacacgcgcccaacttggcgaacggcgtcgcgccacgtgtcccct 17486453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 7763033 - 7762836
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||  |||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |   | | || |||    
T  7763033 ggtgttgataattgttgaaattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcacgaaacaaaga 7762934  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||  |||||||||||    
T  7762933 ctaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 7762836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 163
Target Start/End: Complemental strand, 17929057 - 17928907
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagac 112  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |     | || ||||    
T  17929057 gtgttgataattgttgagattttggtagctaaatggataatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagac 17928958  T
Q  113 taaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||||||||||||| |||||  ||| ||||||||||||||||||||||||||    
T  17928957 taaaacttcaaaataaatgcaaataataagattaagagagtgaaaaatttg 17928907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 210
Target Start/End: Complemental strand, 36209312 - 36209115
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagac 112  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |     | || ||||    
T  36209312 gtgttgataattgttgggatttagttagctaaatggataatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagac 36209213  T
Q  113 taaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||| |||| |||| |||||||||||||||||| | |         ||||||| ||||||||||||||||  |||||||||||    
T  36209212 taaaacttcaaaagaaatgctaataataatattaagagagtgaaaaatatcatttttttttctgtgtctaaatcaaatgatccaagtctctatttgta 36209115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 13 - 159
Target Start/End: Original strand, 6363610 - 6363756
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagac 112  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |     |  | ||||    
T  6363610 gtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaataaagac 6363709  T
Q  113 taaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||   |||| | ||||||||||||||||||||    
T  6363710 taaaacttcaaaagaaaatctaataaaaagattaagagagtgaaaaa 6363756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 4279312 - 4279510
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||||||||| || |||| |     |  | ||     
T  4279312 ggtgttgataatggttgggattttggtagctaaatgggtaatcagaataattttgggtgttgaattgattattattgtgagccatttcactaaataaagt 4279411  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| | |||| |||||||||||||||||||||| ||||         ||||||| ||||||||||||||||  |||||||||||    
T  4279412 ctaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttgatttttttttctgtgtcaaaatcaaatgatccaagtctctatttgta 4279510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 5145228 - 5145081
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||| |||||||||||||||||| | |||| | || |||||| |||||||||||||||||||||| |||| || |     |  | |||    
T  5145228 ggtgttgataattgtttggattttggtagctaaataggtaattaaaaaaattttgggtgttgaattgattattattgagatctatttcactaaataaaga 5145129  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  5145128 ctaaaacatcaaaagaaatgctaataataagattaagagagtgaaaaa 5145081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 53 - 164
Target Start/End: Original strand, 17486102 - 17486213
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| ||||  ||||||||||||||    
T  17486102 tcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaatattaagattaagagag 17486201  T
Q  153 tgaaaaatttga 164  Q
    ||||||||||||    
T  17486202 tgaaaaatttga 17486213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 7585367 - 7585190
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  7585367 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 7585268  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  7585267 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 7585190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 1308491 - 1308334
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||| ||| |     | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  1308491 tcagaagaattttgggtgttgaattgattattattgggatacatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagag 1308392  T
Q  153 tgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
     ||||| |||           ||||||||||||||||||||||||  |||||||||||    
T  1308391 ggaaaatttttgtttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 1308334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 22349763 - 22349679
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  22349763 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 22349679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 13 - 81
Target Start/End: Original strand, 39490347 - 39490415
Alignment:
Q  13 gtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgatt 81  Q
    |||||||||||||||||||||||||||||||||||  |||||||||||||||| |||||||||||||||    
T  39490347 gtgttgataattgttgggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgatt 39490415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 22349505 - 22349445
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  22349505 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 22349445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 43022150 - 43022210
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43022150 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 43022210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 17928807 - 17928748
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17928807 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 17928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2779007 - 2778929
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| |||||||||||| |||| |||||| ||||||||| |||||||||||| |||||||    
T  2779007 gataattgttgggattttcgtagttaaatggataattagaataattttgggtgttgaaatgattattattgagatccat 2778929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 360
Target Start/End: Original strand, 6363842 - 6363949
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| || ||||| ||||||| ||| |||||||| |||||||||| ||||||||||||||||||  ||| ||||| |||||||||||| ||   |||    
T  6363842 tatttgcaattaaataattgagtctaaaatattaagatgataaaaatcgaagcagccaatcgtaacataccaagtgtcccagctttatccaaaacacttt 6363941  T
Q  353 ctctctcc 360  Q
    ||||||||    
T  6363942 ctctctcc 6363949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 39490592 - 39490651
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||    
T  39490592 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatc 39490651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 31204871 - 31204793
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  31204871 gataattgttgggattttcgtagttaaatgggtaattagaataatttttggtgttgaaatggttattattgggatccat 31204793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 37245867 - 37245945
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  37245867 gataattgttgggattttcgtagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 37245945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 315
Target Start/End: Complemental strand, 5144979 - 5144918
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgt 315  Q
    |||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||    
T  5144979 atttgcaatgaaataatcgagtccaaattattaagaagataaaaatcgaagcagccaatcgt 5144918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 14383440 - 14383500
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  14383440 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 14383500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 36527281 - 36527341
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  36527281 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 36527341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 44280574 - 44280634
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  44280574 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 44280634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 13151221 - 13151142
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    ||||||| |||||||| |||||| ||||||||||||| |||||||||| ||||||||||||| |||  ||||| ||||||    
T  13151221 tatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagcagccaatcgaaacgcgccacatgtcac 13151142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 36209082 - 36209023
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||  ||||||||    
T  36209082 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaaaaagccaatc 36209023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 8855212 - 8855290
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  8855212 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 8855290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 9072828 - 9072750
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  9072828 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 9072750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 12858104 - 12858182
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  12858104 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 12858182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 30819525 - 30819447
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  30819525 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 30819447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 31185145 - 31185067
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||  ||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  31185145 gataattgttgggattttattagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 31185067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 36855262 - 36855184
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||  ||||||| |||| |||| |||||| ||||||||| |||||| |||||||||||||    
T  36855262 gataattgttgggattttcgtaattaaatgggtaattagaaaaattttgggtgttgaaatgattactattgggatccat 36855184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 254 - 307
Target Start/End: Complemental strand, 1308289 - 1308236
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcag 307  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| |||||||    
T  1308289 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcag 1308236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 9118287 - 9118348
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  9118287 tatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 9118348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 162
Target Start/End: Complemental strand, 13151337 - 13151284
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaattt 162  Q
    ||||||||||||||||||||| | |||| |||||||||||||||||||||||||    
T  13151337 agactaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaattt 13151284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 39432618 - 39432540
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||| |||||| |||| |||| || |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  39432618 gataattgttgcgattttcgtagttaaaggggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 39432540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 7585136 - 7585087
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  7585136 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 7585087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 312
Target Start/End: Complemental strand, 1072671 - 1072612
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaat 312  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||| ||||    
T  1072671 tatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagtcaat 1072612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 263 - 366
Target Start/End: Original strand, 4279562 - 4279665
Alignment:
Q  263 gaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttctctctccgc 362  Q
    |||||| |||||| |||| ||||| ||  ||||||||| ||||| | |||||||||| |||| ||||| |||| ||||||| || |  ||||||||||||    
T  4279562 gaaataattgagttcaaaatattaggataataaaaatcgaagcaactaatcgtaacatgccaagtgtcccagcattatccaaaactccttctctctccgc 4279661  T
Q  363 gtcc 366  Q
    ||||    
T  4279662 gtcc 4279665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 14151993 - 14151938
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||| |||||||||||||||| | |||| |||||||||||||||||||||| ||||    
T  14151993 agacgaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaacttga 14151938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 14151869 - 14151816
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagca 306  Q
    ||||||| |||||||| |||||| ||||||||||||| |||||||||| |||||    
T  14151869 tatttgcaatgaaataattgagttcaaattattaagatgataaaaatctaagca 14151816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 16218569 - 16218508
Alignment:
Q  34 ttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatcca 95  Q
    |||||||| ||||||| ||| ||||||||| | |||||||||  ||||||||||||||||||    
T  16218569 ttggtagcaaaatggaaaattagaagaattatgggtgttgaaaggattattattgggatcca 16218508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Complemental strand, 7585038 - 7584993
Alignment:
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||  |||| | |||||||||||||||||||||    
T  7585038 ttctctctccgcgtccaactgcaaccgacgcgccttgtcggcgcgt 7584993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 17928894 - 17928858
Alignment:
Q  174 ctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  17928894 ctgtgtccaaatcaaatgatccaagtctctatttgta 17928858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905 (Bit Score: 137; Significance: 2e-71; HSPs: 4)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 254 - 445
Target Start/End: Complemental strand, 1041 - 849
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1041 atttgcaatgaaataattgagtcaaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 942  T
Q  354 tctctccgcgtc-cccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    |||||||||||| |||| |||||| || |||||||||||||||| | ||||| |||||||||||||| |||||||||||||||||| ||||||    
T  941 tctctccgcgtccccccggccagcaacacgccttgtcggcgcgtgtcccacacgcgcccagcttggcgaacggcgtcgcgccacgtatcccct 849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 1244 - 1088
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||| ||||||||||    
T  1244 tcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataaaattaagagag 1145  T
Q  153 tgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||         ||||||||||||||||||||||||  |||||||||||    
T  1144 tgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 1088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 138 - 222
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||||||||  ||||| ||| ||||||||||    
T  138 ggtgttgataattgttggaattttggtagctaaaagggtaatcagaagaattttgggtgttgatatgattgttagtgggatccat 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1905; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 386 - 476
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| |||||||||||| ||||||||||||||||| |||||||||||||  |||| |||| |||||||| | |||||||    
T  386 tatttgcaatgaaataattgagtccaaataattaagaagataaaaattcaagcagccaatcaaaacatgccaagtgtcacaacattatcca 476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 254 - 445
Target Start/End: Complemental strand, 4219030 - 4218838
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  4219030 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcaaacaattgtaacaagccacgtgtcacagctttatccacaattttttc 4218931  T
Q  354 tctctccgcgt-ccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    ||||||||| | | |||||||||||||||||||||||||||||| | ||||| |||||||||||||  ||||||||||||||||||| |||||    
T  4218930 tctctccgcttactccctgccagcgacgcgccttgtcggcgcgtgtcccacacgcgcccagcttggtgaacggcgtcgcgccacgtgccccct 4218838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 14 - 162
Target Start/End: Complemental strand, 25670657 - 25670509
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  25670657 tgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagact 25670558  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaattt 162  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||    
T  25670557 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaaattt 25670509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 32363310 - 32363111
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |     | || |||    
T  32363310 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttaggtgttgaattgattattattgggatccatttcactaaacaaaga 32363211  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa-tttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||||| |  | |||||||||||||||||||||| || |          ||||||||||||||||||||||||  |||||||||||    
T  32363210 ctaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 32363111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 13479445 - 13479295
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||| ||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  13479445 tgttgataattgtaggggttttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaacaaagact 13479346  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||| ||||| |||| |||||||||||||||||||||||||||    
T  13479345 aaaacttcaaaataaatgctaataataagattaagagagtgaaaaatttga 13479295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 27406032 - 27405886
Alignment:
Q  17 tgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaa 116  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||| |     |  | ||||||||    
T  27406032 tgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattgttattgggatccatttcactaaataaagactaaa 27405933  T
Q  117 acttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||||||||||||| | |||| ||||||||||||||||||||||||||    
T  27405932 acttcaaaagaaaagctaataataagattaagagagtgaaaaatttg 27405886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 4219228 - 4219071
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  4219228 tcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagag 4219129  T
Q  153 tgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||         ||||||||||||||||||||||||  |||||||||||    
T  4219128 tgaaaaatttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 4219071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 25670421 - 25670342
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25670421 tatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 25670342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 9958148 - 9958260
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacag-ctttatccacaattttt 351  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||    | ||    
T  9958148 tatttgctatgaaataattgagtccaaattattaagaagataaaaattcaagcaaccaatcgtaacaagccacgtgtcacagcctttatccatttctctt 9958247  T
Q  352 tctctctccgcgt 364  Q
    |||||||||||||    
T  9958248 tctctctccgcgt 9958260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 39008768 - 39008877
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||||||||||||||||||||||||| |||||||||||||||    
T  39008768 tcagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgttaataataagattaagagag 39008867  T
Q  153 tgaaaaattt 162  Q
    ||||||||||    
T  39008868 tgaaaaattt 39008877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 42804637 - 42804485
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||| |||| || |||||||||||||||| ||||||||||||||| ||| || ||||||| |     |  | |||    
T  42804637 ggtgttgataattgttgggattttggtagttaaaagggtaatcagaagaattttgggtgttgaattgattgttagtgagatccatttcactaaataaaga 42804538  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||||||||| | |||  |||||||||||||||||||||| ||||    
T  42804537 ctaaaacttcaaaagaaaagctaacaataagattaagagagtgaaaaacttga 42804485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 254 - 333
Target Start/End: Original strand, 3455287 - 3455366
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3455287 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacatgtcaca 3455366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 13479197 - 13479118
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  13479197 tatttgctatgaaataattgagtccaaattattaagaaaataaaaattcaagcagccaatcgtaacaagccacgtgtcac 13479118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 39239010 - 39239089
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||    
T  39239010 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcataacaagccacgtgtcac 39239089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 23089794 - 23089904
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||| |  |  | || ||||||||||||||||||||||| |||| |||||||||||||||    
T  23089794 tcagaagaattttgggtgttgaattgattattattgggatccatttcaataaacaaagactaaaacttcaaaagaaatgctaataataagattaagagag 23089893  T
Q  153 tgaaaaatttg 163  Q
    |||||| ||||    
T  23089894 tgaaaattttg 23089904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 50 - 210
Target Start/End: Original strand, 39238802 - 39238961
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaaga 149  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| |     | || | |||||||||||||||||||||  ||| ||||||||||||    
T  39238802 taatcagaagaattttgggtgttgaattgattattattgggatccattttactaaacaaaaactaaaacttcaaaagaaatgcaaataataagattaaga 39238901  T
Q  150 gagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  39238902 gagtgaaaaatttga-tttttattctgtgtccaaatcaaatgatccaagtttctatttgta 39238961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 32973221 - 32973044
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  32973221 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 32973122  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  32973121 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 32973044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 30644901 - 30644784
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||||||||| |||||||||||||||  ||||||||||||| |     |  |||||    
T  30644901 ggtgttgataattgttggaattttggtagctaaatgggtaattagaagaattttgggtgttgaattgattggtattgggatccatttccctaaatagaga 30644802  T
Q  112 ctaaaacttcaaaagaaa 129  Q
    ||||||||||||||||||    
T  30644801 ctaaaacttcaaaagaaa 30644784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 27945859 - 27945987
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  27945859 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 27945958  T
Q  130 tgttaatgataagattaagagagtgaaaa 158  Q
    || |||| |||||||||||||||||||||    
T  27945959 tgctaataataagattaagagagtgaaaa 27945987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 40892029 - 40892206
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    ||||||||||| |||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  40892029 gattttggtagttaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 40892128  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  40892129 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 40892206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 253 - 422
Target Start/End: Complemental strand, 32363066 - 32362898
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |     || ||||||| ||||||||||||| |  ||    
T  32363066 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatcgtgaagcaacaagtgtcactgctttatccacaactcatt 32362967  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    || ||| | |||   ||||| |||||||||| |||||||||||| |  |||| |||||||||||| ||||    
T  32362966 ctttct-ctcgttttcctgcaagcgacgcgcgttgtcggcgcgtgtctcacacgcgcccagcttgacaaa 32362898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 29616353 - 29616269
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||  | || ||||||||||||| ||||||||||||||| ||| ||||||||||    
T  29616353 ggtgttgataattgttgggattttggtagctaaaatggtagtcagaagaattttgggtgttgaattgattgttagtgggatccat 29616269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 19241776 - 19241836
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19241776 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 19241836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 42804400 - 42804310
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||| |||| ||||||||  |||| |||| |||||||| | |||||||    
T  42804400 tatttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagtagccaatcaaaacatgccaagtgtcacaacattatcca 42804310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 29616091 - 29616031
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  29616091 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 29616031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 39008972 - 39009031
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  39008972 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagtagccaatc 39009031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 42318352 - 42318495
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||  |||||||||  ||     |||||||||    |||||||| ||| ||||    
T  42318352 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccagccagccaatcacaattcaacacgtgtcagccttttatccaaaatctttt 42318451  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||  |||    ||||||||||||||||||||||    
T  42318452 ctctctccgcgtcttcctttgcgcgacgcgccttgtcggcgcgt 42318495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 23090000 - 23090057
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaa 311  Q
    |||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  23090000 atttgcaatgaaataattgagtccaaattattaagaagataaaactccaagcagccaa 23090057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 255 - 328
Target Start/End: Complemental strand, 36572004 - 36571931
Alignment:
Q  255 tttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtg 328  Q
    ||||| |||||||| |||| |||||| |||||||| |||||||||||||||||||||||| ||| |||||||||    
T  36572004 tttgcaatgaaataattgaatccaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccacgtg 36571931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 7651442 - 7651502
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  7651442 tatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatc 7651502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 329
Target Start/End: Complemental strand, 30644652 - 30644576
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgt 329  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||||| ||| |||||||||| |||| |||||||||    
T  30644652 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaaccagccaatcgaaacacgccacgtgt 30644576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 7827328 - 7827403
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| ||||||||| |||||||||||| ||||    
T  7827328 gataattgttgggattttcgtagttaaatgggtaattagaataattttgggtgttgaaatgattattattgagatc 7827403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 25033401 - 25033479
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  25033401 gataattgttgggattttcgtagttaaatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 25033479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 311
Target Start/End: Complemental strand, 27405797 - 27405739
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaa 311  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||    
T  27405797 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaa 27405739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 31011937 - 31011859
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  31011937 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 31011859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Complemental strand, 13592517 - 13592448
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||||||||  |||| |||| |||||    
T  13592517 atgaaataattgagtccaaattattaagaagttaaaaatccgagcagccaatcaaaacatgccaagtgtc 13592448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Complemental strand, 31008005 - 31007928
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| || ||||| |||||||||||||||||| |||||||||||||||||| ||||||  |||| |||| |||||    
T  31008005 tatttgcaataaaataattgagtccaaattattaaaaagataaaaatccaagcatccaatcaaaacatgccaagtgtc 31007928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 36609830 - 36609910
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||| |||||||||||||||| ||||| ||| |||  ||||||  |||||||||||| ||||||    
T  36609830 ttgataattgttgggagtttgatagctaaatggataattagaagtattctagacgttgaaaggattattattggaatccat 36609910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 3455111 - 3455197
Alignment:
Q  74 aattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    ||||||||||||||||||||||| |     | || ||||||||||||||||||||||  |||| ||||||||||||||| |||||||    
T  3455111 aattgattattattgggatccatttcattaaacaaagactaaaacttcaaaagaaattctaattataagattaagagagggaaaaat 3455197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4580222 - 4580300
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  4580222 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 4580300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 21367801 - 21367879
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||| |||  ||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  21367801 gataattgttgggaatttaatagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 21367879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 41152733 - 41152655
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||| ||||  |||| ||||||| |||| |||| |||||||||||||||| || ||||||||| |||||||    
T  41152733 gataattgttggaatttccgtagttaaatgggtaattagaataattttaggtgttgaaatggttattattgagatccat 41152655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 27946081 - 27946130
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  27946081 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 27946130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 32972990 - 32972941
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  32972990 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 32972941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 40892252 - 40892301
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  40892252 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 40892301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 332
Target Start/End: Original strand, 4938558 - 4938625
Alignment:
Q  265 aatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||| |||||| ||||||||||||| |||||||||  ||||||||||||| |||  ||||||||||||    
T  4938558 aataattgagttcaaattattaagatgataaaaatttaagcagccaatcgaaacgcgccacgtgtcac 4938625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 14279288 - 14279349
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| |||||| ||||||||||||| ||||||||| ||| |||| |||||    
T  14279288 tatttgcaatgaaataattgagttcaaattattaagatgataaaaattcaaacagctaatcg 14279349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Complemental strand, 23648649 - 23648594
Alignment:
Q  275 tccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||||||||||||||||||||| | |||||||||||  |||| |||| |||||    
T  23648649 tccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtc 23648594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 330
Target Start/End: Original strand, 23809923 - 23809978
Alignment:
Q  275 tccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||||||||||||||||||||| | |||||||||||  |||| |||| |||||    
T  23809923 tccaaattattaagaagataaaaatacgagcagccaatcaaaacatgccaagtgtc 23809978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 96
Target Start/End: Original strand, 177392 - 177446
Alignment:
Q  42 taaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||| |||||| ||||||||| | ||||||||| | ||||||||||||||||||    
T  177392 taaattgataattagaagaattatgggtgttgaaattattattattgggatccat 177446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 396
Target Start/End: Complemental strand, 32972893 - 32972847
Alignment:
Q  350 tttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    |||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  32972893 tttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 32972847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 255 - 313
Target Start/End: Complemental strand, 34529018 - 34528960
Alignment:
Q  255 tttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||| |||||||| |||||| ||||||||||||| ||||||||| || ||||| ||||    
T  34529018 tttgcaatgaaataattgagttcaaattattaagatgataaaaattcaggcagctaatc 34528960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 159
Target Start/End: Original strand, 4938406 - 4938458
Alignment:
Q  109 agactaaaacttcaaaagaaat--gttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||||||   | |||| ||||||||||||||||||||||    
T  4938406 agactaaaacttcaaaagaaaaaagctaataataagattaagagagtgaaaaa 4938458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 27946179 - 27946224
Alignment:
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||    
T  27946179 ttctctctccgcgtccaactgtcaccgacgcgccttgtcggcgcgt 27946224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 254 - 445
Target Start/End: Original strand, 38352076 - 38352265
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  38352076 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtcacagctttatccacaa-tttttc 38352174  T
Q  354 tctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaacggcgtcgcgccacgtgtcccct 445  Q
    ||||||  ||| ||||| ||||||||||||||||||| | ||| | ||||| |||||||||||||  |||||||||||||||||||||||||    
T  38352175 tctctctacgt-cccctaccagcgacgcgccttgtcgactcgtgtcccacacgcgcccagcttggtgaacggcgtcgcgccacgtgtcccct 38352265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 32749171 - 32749366
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  32749171 ggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 32749270  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||| |||         |||||||||||||||||| |||||  ||||||||    
T  32749271 ctaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgttccaagtctctattt 32749366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 14 - 210
Target Start/End: Complemental strand, 45549238 - 45549044
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||| ||| |||||||||||||||||||||||||| |     | || |||||    
T  45549238 tgttgataattgtagggattttggtagctaaatgattaatcagaagaattttgggt-ttgaattgattattattgggatccattttactaaacaaagact 45549140  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||         |||||||||||||||||||||||||  ||||||||||    
T  45549139 aaaacttcaaaagaaatgataataataagattaagagagtgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaaatttctatttgta 45549044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 12 - 210
Target Start/End: Complemental strand, 32127104 - 32126906
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  32127104 ggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 32127005  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||  | |||| ||||||||||||||||||||||| |||         ||||||||||||||||||||||||  |||||||||||    
T  32127004 ctaaaacttcaaaagaatggctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 32126906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 12 - 207
Target Start/End: Original strand, 26815343 - 26815538
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||| |||| |||||  |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  26815343 ggtgttgataattgttgggattttgatagccaaatgagtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 26815442  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||| |||         ||||||||||||||||||||||||  ||||||||    
T  26815443 ctaaaacttcaaaagaaaggctaattataagattaagagagtgaaaaatatgatttttttttctgtgtccaaatcaaatgatccaagtctctattt 26815538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 18 - 164
Target Start/End: Original strand, 114900 - 115046
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaa 117  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |     |  | |||||||||    
T  114900 gataattgttgggattttggtagctaaatggctaatcagaagaattttagatgttgaattgattattattgggatccatttcactaaataaagactaaaa 114999  T
Q  118 cttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||| | |||| |||||||||||||||||||||| ||||    
T  115000 cttcaaaagaaaagctaataataagattaagagagtgaaaaacttga 115046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 40690543 - 40690691
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     |  | |||    
T  40690543 ggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaataaaga 40690642  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||||||||||||||||| |||| |||||||||||||||||||||||    
T  40690643 ctaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaat 40690691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 254 - 359
Target Start/End: Original strand, 20354719 - 20354824
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  20354719 atttgcaatgaaataattgagtccaaattattaagaagataaaaattcaaacaggcaatcgtaacaaaccacgtgtcacagctttatccacaattttttc 20354818  T
Q  354 tctctc 359  Q
    ||||||    
T  20354819 tctctc 20354824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 39770186 - 39770263
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39770186 tatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 39770263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 253 - 331
Target Start/End: Complemental strand, 45548998 - 45548920
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtca 331  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  45548998 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtca 45548920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 36521734 - 36521911
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  36521734 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 36521833  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  36521834 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 36521911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 163
Target Start/End: Original strand, 39769976 - 39770097
Alignment:
Q  42 taaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataa 141  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| | |||||| |     | || ||||||||||||||||||||||| |||| ||||    
T  39769976 taaatggataatcagaagaattttgggtgttgaattgattattatttgaatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataa 39770075  T
Q  142 gattaagagagtgaaaaatttg 163  Q
     ||||||| |||||||||||||    
T  39770076 aattaagatagtgaaaaatttg 39770097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 115143 - 115254
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||| |||||||||||||||||| || | ||||| |||||||||||| ||   |||    
T  115143 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcgaagcagccaatcgtaacatgctaagtgtcccagctttatccaaaacacttt 115242  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  115243 ctctctccgcgt 115254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 53 - 163
Target Start/End: Original strand, 38351874 - 38351984
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    |||||||||||||  ||||||||||||||||||||||||||||| |     | || |||||||||||| |||||||||| |||| |||||||||||||||    
T  38351874 tcagaagaattttgtgtgttgaattgattattattgggatccatttcattaaacaaagactaaaactttaaaagaaatgctaataataagattaagagag 38351973  T
Q  153 tgaaaaatttg 163  Q
    |||||||||||    
T  38351974 tgaaaaatttg 38351984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 1939783 - 1939703
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||| |  |||||||| ||||||||||||||||||||    
T  1939783 ttgataattgttgggattttggtaactaaatggataattagaagaattctgagtgttgaaatgattattattgggatccat 1939703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 40300796 - 40300712
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||| |  |||||||||||||||| ||||||||||||||| ||| || |||||||    
T  40300796 ggtgttgataattgttgggattttggtagctaaaagagtaatcagaagaattttgggtgttgaattgattgttagtgtgatccat 40300712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 42881813 - 42881897
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  42881813 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 42881897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 68 - 163
Target Start/End: Original strand, 20354533 - 20354628
Alignment:
Q  68 gtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    ||||||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  20354533 gtgttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttg 20354628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 22660092 - 22660176
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||  ||||||||||||||| || |||||||||||||||| | ||||||||||||| ||| ||||||||||    
T  22660092 ggtgttgataattgttgaaattttggtagctaaaagggtaatcagaagaattttggatgttgaattgattgttagtgggatccat 22660176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 42882057 - 42882117
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42882057 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 42882117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 27 - 159
Target Start/End: Complemental strand, 43201776 - 43201643
Alignment:
Q  27 tgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcaga--gactaaaacttcaaa 124  Q
    ||||||||||||||||||||| ||||||||||||||| |  ||||| || |||||||||||||||||||| |  | ||  | |  |||||||||||||||    
T  43201776 tgggattttggtagctaaatgaataatcagaagaattctgagtgttcaaatgattattattgggatccat-ttcactaaaaaaatgactaaaacttcaaa 43201678  T
Q  125 agaaatgttaatgataagattaagagagtgaaaaa 159  Q
    ||||| | |||| |||||||||||| |||||||||    
T  43201677 agaaaagctaataataagattaagatagtgaaaaa 43201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 25218149 - 25218072
Alignment:
Q  19 ataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||| |||| ||||||| |||| |||| |||||| ||||||||| ||||||||||||||||||||    
T  25218149 ataattgttgggattttcgtagttaaatgggtaattagaaaaattttgggtgttgaaatgattattattgggatccat 25218072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 54 - 159
Target Start/End: Original strand, 38970310 - 38970415
Alignment:
Q  54 cagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagt 153  Q
    |||||||||||| |||||||||||||||||||||| ||||||| |     |  | ||||||||||||||||||||| | |||| ||||||||||||||||    
T  38970310 cagaagaattttgggtgttgaattgattattattgagatccatttcactaaataaagactaaaacttcaaaagaaaagctaataataagattaagagagt 38970409  T
Q  154 gaaaaa 159  Q
    ||||||    
T  38970410 gaaaaa 38970415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 28317687 - 28317627
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28317687 tatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 28317627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 33508216 - 33508156
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  33508216 tatttgcaatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatc 33508156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 54 - 158
Target Start/End: Original strand, 37952038 - 37952142
Alignment:
Q  54 cagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagt 153  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| |     |  | ||||||||||||||||||||||| |||| ||||||||||||||||    
T  37952038 cagaagaattttgggtgttgaattgattgttagtgggatccatttcactaaataaagactaaaacttcaaaagaaatgctaataataagattaagagagt 37952137  T
Q  154 gaaaa 158  Q
    |||||    
T  37952138 gaaaa 37952142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 253 - 343
Target Start/End: Original strand, 22660329 - 22660418
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||  |||||  |||| |||| |||||||| | |||||||    
T  22660329 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagca-tcaatcaaaacatgccaagtgtcacaacattatcca 22660418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 37952242 - 37952302
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  37952242 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 37952302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 47159018 - 47158958
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| ||||||||||||||||| ||||||||||||||||||||||    
T  47159018 tatttgcaatgaaataattgggtccaaattattaagaaaataaaaatccaagcagccaatc 47158958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 26815590 - 26815649
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  26815590 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 26815649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 32749409 - 32749468
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  32749409 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagtcagccaatc 32749468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 137
Target Start/End: Complemental strand, 33508433 - 33508338
Alignment:
Q  42 taaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatg 137  Q
    ||||||||| |||||||||||||| ||||||||||||||| |||||||||||||| |     |  | ||||||||||||||||||||| |||||||    
T  33508433 taaatggatgatcagaagaattttgggtgttgaattgattgttattgggatccatttcactaaataaagactaaaacttcaaaagaaaagttaatg 33508338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 40690795 - 40690854
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  40690795 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 40690854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 5813491 - 5813569
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  5813491 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 5813569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 22194441 - 22194519
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  22194441 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 22194519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 255 - 328
Target Start/End: Original strand, 30567075 - 30567148
Alignment:
Q  255 tttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtg 328  Q
    ||||| |||||||| || |||||||| |||||||| ||||||||||||| |||||||||| ||| |||||||||    
T  30567075 tttgcaatgaaataattaagtccaaaatattaagatgataaaaatccaaacagccaatcgaaaccagccacgtg 30567148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 31 - 96
Target Start/End: Complemental strand, 33078649 - 33078584
Alignment:
Q  31 attttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||||| | | ||||||||||    
T  33078649 attttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattgtcagtgggatccat 33078584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 43201544 - 43201484
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||||| ||||||||||||| || ||||||||||||||||||||    
T  43201544 tatttgcaatgaaataattgagttcaaattattaagatgagaaaaatccaagcagccaatc 43201484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 30630494 - 30630416
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  30630494 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 30630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 36521966 - 36522015
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||    
T  36521966 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatcca 36522015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 33078401 - 33078338
Alignment:
Q  264 aaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgt 327  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||| |||||| ||| ||||||||    
T  33078401 aaataattgagtccaaaatattaagatgataaaaattcaagcagtcaatcgaaaccagccacgt 33078338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 38970507 - 38970586
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    ||||||| |||||||| || ||| ||||||||||||| |||||||||  || |||||||||| |||  ||||||||||||    
T  38970507 tatttgcaatgaaataatttagttcaaattattaagatgataaaaatataaacagccaatcgaaacgcgccacgtgtcac 38970586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 96
Target Start/End: Complemental strand, 47159236 - 47159189
Alignment:
Q  49 ataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  47159236 ataatcagaagaattttgggtgttgaattgattgttagtgggatccat 47159189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33379498 - 33379576
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||| |||||| |||| || |||| |||| |||| |||||| ||||||||| |  |||||||||||||||||    
T  33379498 gataattgttgagattttcgtagttagatgggtaattagaaaaattttgggtgttgaaattgttattattgggatccat 33379576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 42881945 - 42882018
Alignment:
Q  133 taatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    ||||||||||||||||||||||||||| ||||         ||||||||||||||||||||||||| ||||||||    
T  42881945 taatgataagattaagagagtgaaaaacttgatttttttt-ctgtgtccaaatcaaatgatccaaatctctattt 42882018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 298
Target Start/End: Original strand, 30720583 - 30720628
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaa 298  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||    
T  30720583 tatttgcaatgaaataattgggtccaaattattaagaagataaaaa 30720628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 37888304 - 37888373
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    |||||||| |||| |||||| |||||||| |||||||||  ||||||||||| | ||| |||||||||||    
T  37888304 atgaaataattgaatccaaaatattaagatgataaaaatttaagcagccaatagaaaccagccacgtgtc 37888373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 270 - 343
Target Start/End: Complemental strand, 40300228 - 40300155
Alignment:
Q  270 ttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatcca 343  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||  |||| | || |||||||| | |||||||    
T  40300228 ttgagtctaaattattaagaagataaaaatctaagcagtcaatcaaaacatgtcaagtgtcacaacattatcca 40300155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 3e-49; HSPs: 80)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 12 - 163
Target Start/End: Complemental strand, 49027269 - 49027118
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||||| |     | || |||    
T  49027269 ggtgttgataattgttgggattttggtagctaaatggataatcagaaaaattttgggtgttgaattgattattattaggatccatttcactaaacaaaga 49027170  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  49027169 ctaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttg 49027118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 12975049 - 12975246
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  12975049 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 12975148  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||||| |  | |||||||||||||||||||||| ||||         ||||||||||||||||||||||||  |||||||||||    
T  12975149 ctaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaacttga-ttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 12975246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 164
Target Start/End: Complemental strand, 36178330 - 36178180
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||| |     | || |||||    
T  36178330 tgttgataattgttgggattttggtagctaaatgaataatcagaagaattttaggtgttgaattgattattattgagatccattttactaaacaaagact 36178231  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||||||||| |||| ||||||| |||| ||||||||||||||    
T  36178230 aaaacttcaaaagaaatgctaataataagatcaagaaagtgaaaaatttga 36178180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 14 - 164
Target Start/End: Original strand, 51304780 - 51304930
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagact 113  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||| |     | || |||||    
T  51304780 tgttgataattgtagggattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattgggatccattttactaaacaaagact 51304879  T
Q  114 aaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  51304880 aaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatttga 51304930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 159
Target Start/End: Complemental strand, 48886682 - 48886535
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |     | || |||    
T  48886682 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgggtgttgaattgattattattggaatccatttcactaaacaaaga 48886583  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||||| |  | ||||||||||||||||||||||    
T  48886582 ctaaaacttcaaaagaaatgcttttaataagattaagagagtgaaaaa 48886535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 26162389 - 26162195
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  26162389 ggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaatttttggtgttaaattgattattattgggatccatttcactaaacaaaga 26162290  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||| | |||| ||||||||||||||||||| ||| |||         ||||||||||||||||||||||||  ||||||||    
T  26162289 ctaaaacttcaaaagaaaggctaattataagattaagagagtgaagaatatga-ttttttttctgtgtccaaatcaaatgatccaagtctctattt 26162195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 253 - 422
Target Start/End: Original strand, 12975291 - 12975460
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |  |  |||||||||| ||||||||||||| |  ||    
T  12975291 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtgaagaaacacgtgtcactgctttatccacaactcatt 12975390  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    ||||||||||||   |||||  |||| | |||||||||||||||    |||| |||||||||||||||||    
T  12975391 ctctctccgcgtattcctgcacgcgatgggccttgtcggcgcgtgcctcacacgcgcccagcttggcaaa 12975460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 12 - 207
Target Start/End: Complemental strand, 33187962 - 33187767
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||||||| |||||||||||||| |     |  | |||    
T  33187962 ggtgttgataattgttgggattttggtagctagatgggtagtcagaagaattttgggtgttgaattgatttttattgggatccatttcactaaataaaga 33187863  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||||||||||| | |||| |||||||| ||||||||||||| |||          ||||||||||||||||| ||||||  ||||||||    
T  33187862 ctaaaacttcaaaagaaaagctaataataagatttagagagtgaaaaacttggtttttttttctgtgtccaaatcaaataatccaagtctctattt 33187767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 43475635 - 43475782
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| ||| |||||| ||| |     |  | |||    
T  43475635 ggtgttgataattgttgggattttggtagctaaatgggtaatcagaagaattttgagtgttgaattgattgttagtgggattcatttcactaaataaaga 43475734  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||    
T  43475735 ctaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaa 43475782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 51999678 - 51999599
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51999678 tatttgctatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 51999599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 254 - 335
Target Start/End: Original strand, 6833081 - 6833162
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagc 335  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  6833081 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacatgccacgtgtcacagc 6833162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 42 - 210
Target Start/End: Complemental strand, 31170086 - 31169918
Alignment:
Q  42 taaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataa 141  Q
    ||||||| |||||||||||||||| | |||||||||||||||||||||||| ||| |     | || ||||||||||||||| ||||||| |||| ||||    
T  31170086 taaatgggtaatcagaagaattttggctgttgaattgattattattgggattcatttcactaaacaaagactaaaacttcaagagaaatgctaataataa 31169987  T
Q  142 gattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| ||||         ||||||||||||||||||||||||  |||||||||||    
T  31169986 gattaagagagtgaaaaacttgatttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 31169918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 253 - 422
Target Start/End: Complemental strand, 48886438 - 48886269
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||| |     |||||||||| |||||||| |||| |  ||    
T  48886438 tatttgcaatgaaataatcgagtccaaattattaagaagataaaaatccaagcagccaatcgtgaagcaacacgtgtcactgctttatcgacaactcatt 48886339  T
Q  353 ctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgtattccacatgcgcccagcttggcaaa 422  Q
    ||||||||||||   ||||| |||||||||| ||||||||| || |  |||| ||||||| |||||||||    
T  48886338 ctctctccgcgttttcctgcaagcgacgcgcgttgtcggcgtgtgtctcacacgcgcccaacttggcaaa 48886269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 20139766 - 20139850
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  20139766 ggtgttgataattgttgcgattttggtagctaaatgggtaatcagaagaattttgggtgttgaattaattattattgggatccat 20139850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 36178088 - 36178009
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36178088 tatttgctataaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacatgtcac 36178009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 51305025 - 51305104
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  51305025 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagtcacgtgtcac 51305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 30 - 207
Target Start/End: Complemental strand, 30415294 - 30415117
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  30415294 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 30415195  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    || |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  30415194 tgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 30415117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 42564155 - 42564239
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  42564155 ggtgttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 42564239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 210
Target Start/End: Original strand, 11908297 - 11908455
Alignment:
Q  53 tcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagag 152  Q
    ||||||||||| | |||||||||||||||||||||||||||||| |     |  | ||||||||||||||||||||||| |||| |||||||||||||||    
T  11908297 tcagaagaattatgggtgttgaattgattattattgggatccatttcactaaagaaagactaaaacttcaaaagaaatgctaataataagattaagagag 11908396  T
Q  153 tgaaaaattt-gannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||| |          ||||||||||||||||||||||||  |||||||||||    
T  11908397 tgaaaaatttggttttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 11908455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 61 - 210
Target Start/End: Complemental strand, 35472118 - 35471970
Alignment:
Q  61 attttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    ||||| |||||| ||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  35472118 attttgggtgttaaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaattataagattaagagagtgaaaaat 35472019  T
Q  161 ttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
     |||         ||||||||||||||||||||||||  |||||||||||    
T  35472018 atga-ttttttttctgtgtccaaatcaaatgatccaagtctctatttgta 35471970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 6045193 - 6045109
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||| |||||||||||||||||  | |||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  6045193 ggtgttgataattgtttggattttggtagctaaaatggtaatcagaagaattttgggtgttgaattgattgttagtgggatccat 6045109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 12 - 96
Target Start/End: Complemental strand, 10424517 - 10424433
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||  | |||||||||||||||| ||||| ||||||||| ||| ||||||||||    
T  10424517 ggtgttgataattgttgggattttggtagctaaaatggtaatcagaagaattttgggtgtggaattgattgttagtgggatccat 10424433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 30 - 158
Target Start/End: Original strand, 27847819 - 27847947
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || ||||| |||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  27847819 gattttggtagctaaaagggtaatctgaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 27847918  T
Q  130 tgttaatgataagattaagagagtgaaaa 158  Q
    || |||| |||||||||||||||||||||    
T  27847919 tgctaataataagattaagagagtgaaaa 27847947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 333
Target Start/End: Complemental strand, 33187715 - 33187635
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||    
T  33187715 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtcaca 33187635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 20140024 - 20140135
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||   |||| ||||| ||||||||||||    | |||    
T  20140024 tatttgcaatgaaataattgagtctaaattattaagaagataaaaatccaagcagcgaatcgtaatctgccaagtgtcccagctttatccatttatcttt 20140123  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  20140124 ctctctccgcgt 20140135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 364
Target Start/End: Complemental strand, 35540176 - 35540065
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| |||| ||| ||||| |||| |||||||||||||||||| |||| ||||| |||||||||||| ||   |||    
T  35540176 tatttgcaatgaaataattgagtccaaaatattgagatgataagaatcgaagcagccaatcgtaacatgccaagtgtcccagctttatccaaaacacttt 35540077  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  35540076 ctctctccgcgt 35540065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 253 - 364
Target Start/End: Complemental strand, 46136884 - 46136773
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||||||| |||||||| |||||||||| |||||  ||||||||||| | || ||||| |||||||||||| ||  ||||    
T  46136884 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaatcaaagcaatcaatcgtaacatgtcaagtgtcccagctttatccaaaacatttt 46136785  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  46136784 ctctctccgcgt 46136773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 261 - 333
Target Start/End: Complemental strand, 4873765 - 4873693
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| |||| ||||||||    
T  4873765 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccaagtgtcaca 4873693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 6044935 - 6044875
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6044935 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 6044875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 261 - 396
Target Start/End: Complemental strand, 31169874 - 31169739
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttctctctcc 360  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||| || |     || ||||||| ||||||||||||| |  ||||||||||    
T  31169874 atgaaataatagagtccaaattattaagaagataaaaatccaagcagccaattgtgaagcaacatgtgtcactgctttatccacaactcattctctctcc 31169775  T
Q  361 gcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
     |||   ||||| |||||| ||| ||||||||||||    
T  31169774 acgttttcctgctagcgacacgcgttgtcggcgcgt 31169739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 49086350 - 49086428
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| |||||||||||| |||| |||||| ||||||||| || |||||||||||||||||    
T  49086350 gataattgttgggattttcgtagttaaatggataattagaataattttgggtgttgaaatggttattattgggatccat 49086428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 254 - 311
Target Start/End: Original strand, 11908499 - 11908556
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaa 311  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11908499 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaa 11908556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 42564412 - 42564489
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||  |||| |||| |||||    
T  42564412 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatcaaaacatgccatgtgtc 42564489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 261 - 313
Target Start/End: Complemental strand, 10424257 - 10424205
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10424257 atgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatc 10424205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 21228333 - 21228413
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||  |||| ||||||||| | |||||||||   ||||||||||||||||||    
T  21228333 ttgataattgttgggattttggtagctaaatgcgtaattagaagaattatgggtgttgaaaaaattattattgggatccat 21228413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 32120040 - 32119980
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  32120040 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccaagcagccaatc 32119980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 51999860 - 51999768
Alignment:
Q  71 ttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttg 163  Q
    |||||||||||||||||||||||||| |     | || ||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  51999860 ttgaattgattattattgggatccatttcactaaacaaagactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaattttg 51999768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 21229464 - 21229391
Alignment:
Q  19 ataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggat 92  Q
    |||||||||| ||||||| ||||||||||| |||| ||||||||||| |||||||||  |||||||||||||||    
T  21229464 ataattgttgcgattttgatagctaaatgggtaattagaagaattttgggtgttgaaaggattattattgggat 21229391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 29702123 - 29702200
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||||||| ||||||  |||| |||| |||||    
T  29702123 tatttgcaataaaataattgagtccaaattattaagaagataaaaatccaagcatccaatcaaaacatgccaagtgtc 29702200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 54 - 206
Target Start/End: Complemental strand, 50415617 - 50415466
Alignment:
Q  54 cagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagt 153  Q
    |||||||||||| ||||||||||||||| ||| |||||||||| |     |  | ||||||||| ||||||||||||| |||| ||||||||||||||||    
T  50415617 cagaagaattttgggtgttgaattgattgttagtgggatccatttcactaaataaagactaaaatttcaaaagaaatgctaataataagattaagagagt 50415518  T
Q  154 gaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatt 206  Q
    ||||| | ||          ||||||||||||||||||||||||| |||||||    
T  50415517 gaaaattatg-gttttttttctgtgtccaaatcaaatgatccaaatctctatt 50415466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 16 - 89
Target Start/End: Original strand, 51974452 - 51974525
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgg 89  Q
    ||||||||||||| ||||||||||||||||||| |||| | ||||||| | ||||||||| |||||||||||||    
T  51974452 ttgataattgttgagattttggtagctaaatgggtaattaaaagaattctgggtgttgaaatgattattattgg 51974525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 59 - 159
Target Start/End: Original strand, 6832879 - 6832979
Alignment:
Q  59 gaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaa 158  Q
    ||||||| ||||||||||||||||||||||| |||||| |     || | ||||||| ||||||||||||| | |||| |||||||||||||||||||||    
T  6832879 gaattttgggtgttgaattgattattattggaatccatttcactcagtaaagactaatacttcaaaagaaaagctaataataagattaagagagtgaaaa 6832978  T
Q  159 a 159  Q
    |    
T  6832979 a 6832979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 37182680 - 37182620
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  37182680 tatttgcaatgaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 37182620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 44084775 - 44084835
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||  |||||||||||||||||||||||||||||||||||||||    
T  44084775 tatttgcaatgaaataattggttccaaattattaagaagataaaaatccaagcagccaatc 44084835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 35471928 - 35471869
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  35471928 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 35471869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 5844879 - 5844801
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  5844879 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 5844801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 17469629 - 17469707
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  17469629 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 17469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 25787616 - 25787538
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  25787616 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 25787538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 25829573 - 25829495
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  25829573 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 25829495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33751525 - 33751603
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  33751525 gataattgttgggattttcgtagttaaatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 33751603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 38571757 - 38571647
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttc 353  Q
    |||||| || ||||| ||||||||||| |||||||| ||||||||||||||||||||| || |||  |||||||||||   |||||||||    | ||||    
T  38571757 atttgcaataaaataattgagtccaaaatattaagatgataaaaatccaagcagccaaacgaaacgcgccacgtgtcatgcctttatccatttctctttc 38571658  T
Q  354 tctctccgcgt 364  Q
    |||||||||||    
T  38571657 tctctccgcgt 38571647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 47147486 - 47147564
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  47147486 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 47147564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 303
Target Start/End: Complemental strand, 49027029 - 49026979
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaa 303  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  49027029 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatccaa 49026979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 49822805 - 49822727
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| |||||||||||| |||||||    
T  49822805 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatgattattattgagatccat 49822727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 4874001 - 4873920
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    ||||||||||||  || ||||||||||||||| |||| ||||| |||||| ||| ||| ||||||||||| |||||||||||    
T  4874001 ggtgttgataataatttggattttggtagctagatgggtaatctgaagaactttgggtattgaattgattgttattgggatc 4873920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 261 - 330
Target Start/End: Original strand, 7008585 - 7008654
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    |||||||| ||||||||||| |||||||| |||||||||||||||||||||||  | | |||||||||||    
T  7008585 atgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcaaacccagccacgtgtc 7008654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 159
Target Start/End: Complemental strand, 35540393 - 35540272
Alignment:
Q  38 tagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaatgttaatg 137  Q
    ||||||||||  |||||| ||||||||| | |||||||||||||||||||| ||| ||| |     |  | ||| ||||||||||||||||| | ||||     
T  35540393 tagctaaatgagtaatcataagaattttggatgttgaattgattattattgagattcatttcactaaataaagattaaaacttcaaaagaaaagctaata 35540294  T
Q  138 ataagattaagagagtgaaaaa 159  Q
    ||||||||||||||||||||||    
T  35540293 ataagattaagagagtgaaaaa 35540272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 43475880 - 43475957
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| || ||||| ||||||| ||| |||||||| |||||||||||||||||||||||| ||| ||||| |||||    
T  43475880 tatttgcaataaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccatgtgtc 43475957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 302
Target Start/End: Complemental strand, 50415410 - 50415361
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  50415410 tatttgcaatgaaataattgagtccaaattattaagaagataaaaatcca 50415361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 55027224 - 55027285
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| ||||||| ||| |||||||| ||||||||||||||||||||||||    
T  55027224 tatttgcaatgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcg 55027285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 50734484 - 50734544
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| || ||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  50734484 tatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50734544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 50778371 - 50778311
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| || ||||| ||| |||||||||||||||||||||||||||| |||||||||||    
T  50778371 tatttgcaataaaataattgggtccaaattattaagaagataaaaatccgagcagccaatc 50778311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 51998846 - 51998786
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| ||| |||||||||||||||||||| ||||||| |||||||||||    
T  51998846 tatttgcaatgaaataattgggtccaaattattaagaagatcaaaatccgagcagccaatc 51998786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 21 - 96
Target Start/End: Complemental strand, 30688759 - 30688684
Alignment:
Q  21 aattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||| ||||| |||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  30688759 aattgttggaattttcgtagttaaatgggtaattagaataattttgggtgttgaaatggttattattgggatccat 30688684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 46137025 - 46136970
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    ||||||||||||||||||||||| |||| | |||||||||||||||||||| ||||    
T  46137025 agactaaaacttcaaaagaaatgctaataaaaagattaagagagtgaaaaacttga 46136970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 49406941 - 49406862
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    ||||||| |||||||| |||||| ||||||||||||| |||||||||| | |||| |||||| |||  ||||||||||||    
T  49406941 tatttgcaatgaaataattgagttcaaattattaagatgataaaaatctatgcagtcaatcgaaacgcgccacgtgtcac 49406862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 254 - 300
Target Start/End: Complemental strand, 26162149 - 26162103
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatc 300  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||    
T  26162149 atttgcaatgaaataattgagtccaaattattaagaagataaaaatc 26162103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 253 - 396
Target Start/End: Complemental strand, 30415063 - 30414920
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaag-cagccaatcgtaacaagccacgtgtcacagc-tttatccacaatttt 350  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||| | ||||||| |  |  |||| ||| ||  |||| | |||||| ||   |    
T  30415063 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaggccagccaacc--agaaagcgacgcgtggcagcatctatccaaaacagt 30414966  T
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  30414965 ttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 30414920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33936400 - 33936478
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||| || |||||||||||||||||    
T  33936400 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatggttattattgggatccat 33936478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 255 - 313
Target Start/End: Original strand, 41183730 - 41183788
Alignment:
Q  255 tttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| |||| ||||||||    
T  41183730 tttgcaatgaaataattgagtccaaattattgagaagataaaaattcaaggagccaatc 41183788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 42598271 - 42598193
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||| |||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  42598271 gataaatgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 42598193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 22 - 96
Target Start/End: Original strand, 50034506 - 50034580
Alignment:
Q  22 attgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||| |||| ||||||| || | |||| |||||| ||||||||| || |||||||||||||||||    
T  50034506 attgttgggattttcgtagttaaatgggtagttagaataattttgggtgttgaaatggttattattgggatccat 50034580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 4046586 - 4046663
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||   ||||||||||||||||||||||||||| |||||||||||  |||| |||| |||||    
T  4046586 tatttgcaatgaaataattcgatccaaattattaagaagataaaaatccgagcagccaatcaaaacatgccaagtgtc 4046663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 15007655 - 15007727
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccac 325  Q
    ||||||| |||||||| ||||||||||| |||| ||| |||||||||  ||||||||||||| ||| ||||||    
T  15007655 tatttgcaatgaaataattgagtccaaaatatttagatgataaaaattgaagcagccaatcgaaaccagccac 15007727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 50020211 - 50020287
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtg-ttgaattgattattattgggatc 93  Q
    |||||||||||| ||||| |||| ||||||| |||| |||| |||||| |||| ||||| |||||||||||||||||    
T  50020211 gataattgttggaattttcgtagttaaatgggtaattagaataattttgggtgtttgaaatgattattattgggatc 50020287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Original strand, 29701972 - 29702027
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    ||||||||||||||||||||| | |||| || ||||||||||||||||||| ||||    
T  29701972 agactaaaacttcaaaagaaaagctaataatgagattaagagagtgaaaaacttga 29702027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 109 - 164
Target Start/End: Complemental strand, 49407077 - 49407022
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttga 164  Q
    ||||||||||||||||||||| | |||| ||||||||||||| |||||||| ||||    
T  49407077 agactaaaacttcaaaagaaaagctaataataagattaagagggtgaaaaacttga 49407022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 51435839 - 51435917
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||  || |||||||||||||||||    
T  51435839 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgagatggttattattgggatccat 51435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 253 - 302
Target Start/End: Original strand, 27848051 - 27848100
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatcca 302  Q
    ||||||| |||||||| ||||||| ||| |||||||||||||||||||||    
T  27848051 tatttgcaatgaaataattgagtctaaagtattaagaagataaaaatcca 27848100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 42602083 - 42602158
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    |||||||||| |||||||  ||| ||||||| |||| |||| |||||| |||||| || || ||||||||||||||    
T  42602083 gataattgttaggattttcatagttaaatgggtaattagaataattttgggtgttaaaatggttattattgggatc 42602158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 98; Significance: 4e-48; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 12 - 210
Target Start/End: Original strand, 34242630 - 34242825
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||   ||||||||||||||| |     || | |||    
T  34242630 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttgggtgctgaattg---attattgggatccatttcactaagtaaaga 34242726  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    |||||||||||||||||| | |||| ||||||||||||||||||||||||||          ||||||||||||||||||||||||| |||||||||||    
T  34242727 ctaaaacttcaaaagaaaagctaataataagattaagagagtgaaaaatttggtttttttttctgtgtccaaatcaaatgatccaaatctctatttgta 34242825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 18642465 - 18642612
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||| |     | || |||    
T  18642465 ggtgttgataattgttgggattttggtagctaaaagtataatgagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaaga 18642564  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  18642565 ctaaaacttcaaaagaaatgctaataataagatcaagagagtgaaaaa 18642612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 26653989 - 26653810
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||| |     | || |||||||||||||||||||||    
T  26653989 gattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattggaatccattttactaaacaaagactaaaacttcaaaagaaa 26653890  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    || |||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  26653889 tgctaataataagattaagagagtgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaagtttctatttgta 26653810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 30 - 210
Target Start/End: Complemental strand, 26759958 - 26759779
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    ||||||||||||||||||  |||||||||||||||| ||||||||||||||||||||||| |||||| |     | || |||||||||||||||||||||    
T  26759958 gattttggtagctaaatgagtaatcagaagaattttgggtgttgaattgattattattggaatccattttactaaacaaagactaaaacttcaaaagaaa 26759859  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    || |||| |||||||||||||||||||||||||||         ||||||||||||||||||||||||   ||||||||||    
T  26759858 tgctaataataagattaagagagtgaaaaatttga-ttttttttctgtgtccaaatcaaatgatccaagtttctatttgta 26759779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 8222322 - 8222406
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  8222322 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttgggcgttgaattgattgttattgggatccat 8222406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 26653762 - 26653683
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26653762 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcac 26653683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 253 - 332
Target Start/End: Complemental strand, 26759730 - 26759651
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcac 332  Q
    |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  26759730 tatttgctatgaaataattgagtccaaattattaagaaaataaaaatccaagcagccaatcgtaacaagccacgtgtcac 26759651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 12502119 - 12502203
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||| ||||| ||||||||    
T  12502119 ggtgttgataattgttgggattttggtagctaaatggataagcagaataattttgggtgttgaattgattgttatttggatccat 12502203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 7540426 - 7540506
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||  |||||||||||||||||||    
T  7540426 ttgataattgttgggattttggtagctaaatggataattagaagaattatgggtgttgaaaggattattattgggatccat 7540506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 30 - 207
Target Start/End: Original strand, 34841714 - 34841891
Alignment:
Q  30 gattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagagactaaaacttcaaaagaaa 129  Q
    |||||||||||||||| || |||||||||||||||| ||||||| ||||||| ||| |||||||||| |     |  | |||||||||||||||||||||    
T  34841714 gattttggtagctaaaagggtaatcagaagaattttgggtgttggattgattgttagtgggatccatttcactaattaaagactaaaacttcaaaagaaa 34841813  T
Q  130 tgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |  |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  34841814 ttctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 34841891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 253 - 333
Target Start/End: Original strand, 34242864 - 34242943
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcaca 333  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  34242864 tatttgcaatgaaataatt-agtccaaattattaagaagataaaaatccaagcagtcaatcgtaacatgccacgtgtcaca 34242943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 12513235 - 12513320
Alignment:
Q  14 tgttgataattgttgggattttggtagctaa---atggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    ||||||||||||||||||||||| |||||||   |||| |||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12513235 tgttgataattgttgggattttgatagctaataaatgggtaatcagaagaattttagatgttgaattgattgttattgggatccat 12513320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 24115260 - 24115342
Alignment:
Q  14 tgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||| |||||||||||||||||| | || ||||||||||| | ||||||||| ||||||||||||||||||||    
T  24115260 tgttgataattgtttggattttggtagctaaataggtattcagaagaattctgggtgttgaaatgattattattgggatccat 24115342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 24348944 - 24349004
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  24348944 tatttgcaatgaaataattgaatccaaattattaagaagataaaaatccaagcagccaatc 24349004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 330
Target Start/End: Original strand, 10886698 - 10886775
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtc 330  Q
    ||||||| |||||||| ||| |||||||||||||||||||||| |||||||||||||||||  |||| |||| |||||    
T  10886698 tatttgcaatgaaataattgggtccaaattattaagaagataacaatccaagcagccaatcaaaacatgccatgtgtc 10886775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 24348785 - 24348837
Alignment:
Q  109 agactaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaatt 161  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  24348785 agactaaaacttcaaaagaaatgctaataataagattaagagagtgaaaaatt 24348837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 261 - 364
Target Start/End: Original strand, 8222581 - 8222684
Alignment:
Q  261 atgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaattttttctctctcc 360  Q
    |||||||| ||||||||||| |||||||| ||||||||| |||||||||||||| |||| ||||| ||||  | |||||||||    | |||||||||||    
T  8222581 atgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaacacgccacatgtcctatctttatccatttctctttctctctcc 8222680  T
Q  361 gcgt 364  Q
    ||||    
T  8222681 gcgt 8222684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 6377338 - 6377260
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  6377338 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 6377260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17958206 - 17958128
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  17958206 gataattgttgggattttcgtagttatatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 17958128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 323
Target Start/End: Original strand, 30446724 - 30446794
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagcc 323  Q
    ||||||| |||||||| ||||||||||| |||||||| ||||||||| |||||||||||||| ||| ||||    
T  30446724 tatttgcaatgaaataattgagtccaaaatattaagatgataaaaattcaagcagccaatcgaaaccagcc 30446794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 34328613 - 34328691
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| ||||||| |||| |||| |||||| | ||||||| || |||||||||||||||||    
T  34328613 gataattgttgggattttcgtagttaaatgggtaattagaataattttggttgttgaaatggttattattgggatccat 34328691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 253 - 396
Target Start/End: Original strand, 34841945 - 34842088
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaag-cagccaatcgtaacaagccacgtgtcacagc-tttatccacaatttt 350  Q
    ||||||| |||||||| ||||||||||| ||||||||||||||||||||| | ||||||| |  |  |||| ||| || ||||| | |||||| ||   |    
T  34841945 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaggccagccaacc--agaaagcgacgcgtgacagcatctatccaaaacagt 34842042  T
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||| ||| ||  ||||||||||||||||||||    
T  34842043 ttctctctccgcgtccctctgtcacagacgcgccttgtcggcgcgt 34842088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 253 - 314
Target Start/End: Original strand, 12502373 - 12502434
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcg 314  Q
    ||||||| |||||||| ||||||||||||||||||||| | ||||||||||||| |||||||    
T  12502373 tatttgcaatgaaataattgagtccaaattattaagaataaaaaaatccaagcaaccaatcg 12502434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 304
Target Start/End: Original strand, 8668902 - 8668953
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaag 304  Q
    ||||||| |||||||| ||||||||||| |||||||||||||||||||||||    
T  8668902 tatttgcaatgaaataattgagtccaaagtattaagaagataaaaatccaag 8668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 253 - 312
Target Start/End: Original strand, 12513483 - 12513542
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaat 312  Q
    ||||||| |||||||| ||||||| ||| ||||||||||| |||||||||||||||||||    
T  12513483 tatttgcaatgaaataattgagtctaaaatattaagaagaaaaaaatccaagcagccaat 12513542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 253 - 313
Target Start/End: Original strand, 8675163 - 8675223
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    ||||||| |||||||| |||||||||||||||||| |||||||||||| |  |||||||||    
T  8675163 tatttgcaatgaaataattgagtccaaattattaaaaagataaaaatctagccagccaatc 8675223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 634895 - 634973
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||  |  |||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  634895 gataattgttgggattttcgtatttttatgggtaattagaaaaattttgggtgttgaaatggttattattgggatccat 634973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 29951934 - 29951856
Alignment:
Q  18 gataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||||||||| |||| || |||| |||| |||| | |||| ||||||||| |  |||||||||||||||||    
T  29951934 gataattgttgggattttcgtagttatatgggtaattagaaaatttttgggtgttgaaatagttattattgggatccat 29951856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 93
Target Start/End: Original strand, 10886487 - 10886530
Alignment:
Q  50 taatcagaagaattttaggtgttgaattgattattattgggatc 93  Q
    |||||||||||||||| ||||||||||||||| ||| |||||||    
T  10886487 taatcagaagaattttgggtgttgaattgattgttagtgggatc 10886530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 8668765 - 8668850
Alignment:
Q  122 aaaagaaatgttaatgataagattaagagagtgaaaaatttgannnnnnnnnctgtgtccaaatcaaatgatccaaacctctattt 207  Q
    |||||||||| |||| ||||||||||||||||||||| | ||          ||||||||||||||||||||||||  ||||||||    
T  8668765 aaaagaaatgctaataataagattaagagagtgaaaattatggtttttttttctgtgtccaaatcaaatgatccaagtctctattt 8668850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 396
Target Start/End: Original strand, 8669000 - 8669045
Alignment:
Q  351 ttctctctccgcgtccccctgccagcgacgcgccttgtcggcgcgt 396  Q
    ||||||||||||||||  ||| || |||||||||||||||||||||    
T  8669000 ttctctctccgcgtccaactgtcaccgacgcgccttgtcggcgcgt 8669045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 24348859 - 24348895
Alignment:
Q  174 ctgtgtccaaatcaaatgatccaaacctctatttgta 210  Q
    ||||||||||||||||||||||||  |||||||||||    
T  24348859 ctgtgtccaaatcaaatgatccaagtctctatttgta 24348895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1454 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold1454
Description:

Target: scaffold1454; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 12 - 159
Target Start/End: Original strand, 489 - 636
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||||| |     | || |||    
T  489 ggtgttgataattgttgggattttggtagctaaaagtataatgagaagaattttgggtgttgaattgattattattgggatccatttcactaaacaaaga 588  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaa 159  Q
    |||||||||||||||||||| |||| ||||||| ||||||||||||||    
T  589 ctaaaacttcaaaagaaatgctaataataagatcaagagagtgaaaaa 636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 81; Significance: 6e-38; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 12 - 160
Target Start/End: Original strand, 106054 - 106202
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  106054 ggtgttgataattgttgggattttgatagccaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 106153  T
Q  112 ctaaaacttcaaaagaaatgttaatgataagattaagagagtgaaaaat 160  Q
    |||||||||||||||||  | |||| |||||||||||||||||||||||    
T  106154 ctaaaacttcaaaagaatggctaattataagattaagagagtgaaaaat 106202  T

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Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Original strand, 106298 - 106357
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  106298 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 106357  T

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Target: scaffold0021 (Bit Score: 76; Significance: 6e-35; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 254 - 364
Target Start/End: Complemental strand, 109832 - 109721
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacag-ctttatccacaatttttt 352  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    | |||    
T  109832 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagcctttatccatttctcttt 109733  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  109732 ctctctccgcgt 109721  T

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Target: scaffold0021; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 110064 - 109945
Alignment:
Q  12 ggtgttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccatgtggagtagcagaga 111  Q
    |||||||||||||||||| |||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||| |     | || |||    
T  110064 ggtgttgataattgttggaattttgatagctaaatgggtaatcagaagaattttgggtgttaaattgattattattgggatccatttcactaaacaaaga 109965  T
Q  112 ctaaaacttcaaaagaaatg 131  Q
    ||||||||||||||||||||    
T  109964 ctaaaacttcaaaagaaatg 109945  T

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Target: scaffold1183 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 253 - 364
Target Start/End: Original strand, 112 - 223
Alignment:
Q  253 tatttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatcgtaacaagccacgtgtcacagctttatccacaatttttt 352  Q
    ||||||| |||||||| ||||||| |||||||||||| |||||||||||||| ||||||||||||   |||| ||||| ||||||||||||    | |||    
T  112 tatttgcaatgaaataattgagtcaaaattattaagatgataaaaatccaagaagccaatcgtaatctgccaagtgtctcagctttatccaattatcttt 211  T
Q  353 ctctctccgcgt 364  Q
    ||||||||||||    
T  212 ctctctccgcgt 223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 88
Target Start/End: Complemental strand, 166247 - 166175
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattg 88  Q
    ||||||||||||||||||||||||| |||||||||||| || |||||||| |||||||||  |||||||||||    
T  166247 ttgataattgttgggattttggtagttaaatggataattagcagaattttgggtgttgaaaggattattattg 166175  T

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Target: scaffold0015 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 254 - 313
Target Start/End: Complemental strand, 83522 - 83463
Alignment:
Q  254 atttgctatgaaatagttgagtccaaattattaagaagataaaaatccaagcagccaatc 313  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||  |||||||||    
T  83522 atttgcaatgaaataattgagtccaaattattaagaagataaaaatccagccagccaatc 83463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 96
Target Start/End: Complemental strand, 6578 - 6498
Alignment:
Q  16 ttgataattgttgggattttggtagctaaatggataatcagaagaattttaggtgttgaattgattattattgggatccat 96  Q
    |||||||||||| | ||||| |||| ||||||| |||| |||| |||||| ||||||||| || |||||||||||||||||    
T  6578 ttgataattgtttgaattttcgtagttaaatgggtaattagaataatttttggtgttgaaatgtttattattgggatccat 6498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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