View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4834-Insertion-9 (Length: 193)

Name: NF4834-Insertion-9
Description: NF4834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4834-Insertion-9
NF4834-Insertion-9
[»] chr2 (40 HSPs)
chr2 (42-186)||(26254657-26254805)
chr2 (12-66)||(9689656-9689710)
chr2 (12-75)||(7071446-7071509)
chr2 (8-67)||(15439867-15439926)
chr2 (12-66)||(19904885-19904939)
chr2 (12-72)||(5754672-5754732)
chr2 (12-72)||(32015643-32015703)
chr2 (19-66)||(20607132-20607179)
chr2 (12-66)||(11798209-11798263)
chr2 (12-72)||(4739719-4739779)
chr2 (126-186)||(11798301-11798361)
chr2 (12-72)||(12705076-12705136)
chr2 (8-56)||(13113417-13113465)
chr2 (12-72)||(16136468-16136528)
chr2 (12-72)||(20560804-20560864)
chr2 (12-72)||(25068231-25068291)
chr2 (12-72)||(29543183-29543243)
chr2 (12-72)||(33012438-33012498)
chr2 (12-72)||(38384137-38384197)
chr2 (8-59)||(6510862-6510912)
chr2 (13-72)||(28230769-28230828)
chr2 (127-185)||(25068139-25068197)
chr2 (12-54)||(28228609-28228651)
chr2 (126-187)||(4604080-4604141)
chr2 (15-72)||(20570348-20570405)
chr2 (8-53)||(27023820-27023865)
chr2 (20-72)||(11937545-11937597)
chr2 (12-72)||(11942758-11942818)
chr2 (20-72)||(12890796-12890848)
chr2 (12-72)||(13548590-13548650)
chr2 (12-72)||(13878680-13878740)
chr2 (12-72)||(14018805-14018865)
chr2 (20-72)||(17267805-17267857)
chr2 (12-72)||(17767241-17767301)
chr2 (150-186)||(17767363-17767399)
chr2 (12-72)||(27096079-27096139)
chr2 (12-72)||(28261576-28261636)
chr2 (12-72)||(35333895-35333955)
chr2 (12-72)||(36868398-36868458)
chr2 (12-72)||(44589262-44589322)
[»] chr3 (39 HSPs)
chr3 (12-74)||(44984544-44984606)
chr3 (12-72)||(3457312-3457372)
chr3 (12-72)||(53155109-53155169)
chr3 (12-66)||(55455258-55455312)
chr3 (12-72)||(1074573-1074633)
chr3 (12-72)||(13701681-13701741)
chr3 (8-72)||(28929209-28929273)
chr3 (12-72)||(39610597-39610657)
chr3 (12-72)||(40883554-40883614)
chr3 (12-72)||(41868012-41868072)
chr3 (13-72)||(32080443-32080502)
chr3 (11-66)||(54238697-54238752)
chr3 (12-66)||(2192474-2192528)
chr3 (12-53)||(20200743-20200784)
chr3 (12-53)||(20202925-20202966)
chr3 (12-72)||(4082098-4082158)
chr3 (8-72)||(4817555-4817619)
chr3 (12-72)||(14585852-14585912)
chr3 (12-72)||(30155969-30156029)
chr3 (8-72)||(31270699-31270763)
chr3 (8-72)||(40012947-40013011)
chr3 (137-193)||(53962393-53962449)
chr3 (12-72)||(55090378-55090438)
chr3 (126-193)||(30156062-30156129)
chr3 (12-66)||(19148371-19148425)
chr3 (12-66)||(24483375-24483429)
chr3 (12-58)||(25084413-25084459)
chr3 (126-192)||(32080535-32080601)
chr3 (12-66)||(48401488-48401542)
chr3 (8-53)||(21803919-21803964)
chr3 (8-53)||(46926792-46926837)
chr3 (126-186)||(33637691-33637751)
chr3 (8-56)||(38379429-38379477)
chr3 (8-72)||(48212723-48212787)
chr3 (126-186)||(48652221-48652281)
chr3 (12-72)||(48855267-48855327)
chr3 (12-72)||(49627783-49627843)
chr3 (12-72)||(50981145-50981205)
chr3 (12-72)||(51084279-51084339)
[»] chr8 (24 HSPs)
chr8 (12-72)||(2234149-2234209)
chr8 (12-75)||(31202835-31202898)
chr8 (8-66)||(30026557-30026615)
chr8 (12-72)||(2024903-2024963)
chr8 (12-72)||(31407430-31407490)
chr8 (12-72)||(4757538-4757598)
chr8 (12-72)||(9501958-9502018)
chr8 (12-72)||(10334866-10334926)
chr8 (21-61)||(10632820-10632860)
chr8 (12-72)||(13575888-13575948)
chr8 (8-72)||(14600373-14600437)
chr8 (12-72)||(28296794-28296854)
chr8 (21-60)||(9627831-9627870)
chr8 (8-66)||(5526198-5526256)
chr8 (12-66)||(24790849-24790903)
chr8 (12-72)||(15286711-15286772)
chr8 (12-72)||(15467080-15467141)
chr8 (11-72)||(24210630-24210691)
chr8 (12-53)||(32413178-32413219)
chr8 (8-72)||(4928303-4928367)
chr8 (8-56)||(7256416-7256464)
chr8 (12-72)||(26673461-26673521)
chr8 (12-72)||(37613026-37613086)
chr8 (8-72)||(43936855-43936919)
[»] chr4 (35 HSPs)
chr4 (12-72)||(32616530-32616590)
chr4 (12-75)||(29266575-29266638)
chr4 (12-72)||(7060704-7060764)
chr4 (12-72)||(8517130-8517190)
chr4 (12-72)||(18502513-18502573)
chr4 (12-72)||(27395206-27395266)
chr4 (7-72)||(626225-626290)
chr4 (12-72)||(477692-477752)
chr4 (12-72)||(6882334-6882394)
chr4 (12-72)||(6912070-6912130)
chr4 (12-72)||(20887428-20887488)
chr4 (12-72)||(24611469-24611529)
chr4 (12-72)||(28837445-28837505)
chr4 (12-72)||(42197943-42198003)
chr4 (12-72)||(45350741-45350801)
chr4 (12-72)||(45360220-45360280)
chr4 (8-56)||(46268071-46268119)
chr4 (12-72)||(56062364-56062424)
chr4 (12-72)||(56236502-56236562)
chr4 (17-66)||(37431552-37431601)
chr4 (12-72)||(3159352-3159412)
chr4 (8-56)||(3171291-3171339)
chr4 (8-72)||(8712898-8712962)
chr4 (12-72)||(13965933-13965993)
chr4 (12-72)||(20399573-20399633)
chr4 (126-186)||(22757382-22757442)
chr4 (12-72)||(24100523-24100583)
chr4 (12-72)||(24568386-24568446)
chr4 (8-56)||(27091114-27091162)
chr4 (12-72)||(31522336-31522396)
chr4 (12-72)||(31932637-31932697)
chr4 (8-52)||(34668575-34668619)
chr4 (12-72)||(38943828-38943888)
chr4 (126-186)||(38943921-38943981)
chr4 (12-72)||(43244052-43244112)
[»] chr6 (19 HSPs)
chr6 (126-192)||(30813348-30813414)
chr6 (12-72)||(5146316-5146376)
chr6 (12-72)||(30813447-30813507)
chr6 (12-75)||(23654636-23654699)
chr6 (12-66)||(31705561-31705615)
chr6 (8-53)||(31804602-31804647)
chr6 (12-72)||(2304509-2304569)
chr6 (12-72)||(4394160-4394220)
chr6 (12-72)||(6295920-6295980)
chr6 (12-72)||(6302730-6302790)
chr6 (8-72)||(8693338-8693402)
chr6 (126-186)||(12481143-12481203)
chr6 (14-72)||(14782828-14782886)
chr6 (8-53)||(31748345-31748390)
chr6 (8-56)||(2488528-2488576)
chr6 (12-72)||(12653989-12654049)
chr6 (16-72)||(16328765-16328821)
chr6 (16-72)||(16352224-16352280)
chr6 (12-72)||(19402523-19402583)
[»] chr1 (25 HSPs)
chr1 (8-66)||(25689520-25689578)
chr1 (11-72)||(27535087-27535148)
chr1 (20-72)||(14265673-14265725)
chr1 (12-72)||(25032774-25032834)
chr1 (8-72)||(29551432-29551496)
chr1 (12-72)||(51418374-51418434)
chr1 (8-53)||(23257476-23257521)
chr1 (12-72)||(12871996-12872056)
chr1 (12-72)||(13488207-13488267)
chr1 (8-72)||(15390919-15390983)
chr1 (20-72)||(32784469-32784521)
chr1 (12-72)||(33144827-33144887)
chr1 (12-72)||(33938715-33938775)
chr1 (12-71)||(10188561-10188620)
chr1 (12-66)||(4882048-4882102)
chr1 (14-72)||(17347965-17348023)
chr1 (12-66)||(29938596-29938650)
chr1 (125-186)||(47551377-47551438)
chr1 (126-186)||(4870806-4870866)
chr1 (20-72)||(15790955-15791007)
chr1 (20-72)||(28677818-28677870)
chr1 (12-72)||(29205658-29205718)
chr1 (12-72)||(33486707-33486767)
chr1 (20-72)||(37822042-37822094)
chr1 (12-72)||(44517538-44517598)
[»] chr7 (36 HSPs)
chr7 (6-66)||(5684751-5684811)
chr7 (6-66)||(5709801-5709861)
chr7 (12-72)||(6667785-6667845)
chr7 (12-72)||(24988171-24988231)
chr7 (20-72)||(1280816-1280868)
chr7 (12-72)||(3266764-3266824)
chr7 (12-72)||(8180191-8180251)
chr7 (12-72)||(21991052-21991112)
chr7 (12-72)||(24319894-24319954)
chr7 (8-72)||(26161345-26161408)
chr7 (8-56)||(27535833-27535881)
chr7 (20-72)||(36579020-36579072)
chr7 (12-72)||(39532646-39532706)
chr7 (12-72)||(42603450-42603510)
chr7 (126-186)||(45482352-45482412)
chr7 (8-63)||(14762416-14762471)
chr7 (13-72)||(41288346-41288405)
chr7 (8-66)||(5238330-5238388)
chr7 (7-53)||(29804359-29804405)
chr7 (12-74)||(37375727-37375788)
chr7 (12-66)||(45482448-45482502)
chr7 (12-53)||(19895369-19895410)
chr7 (126-183)||(25531738-25531795)
chr7 (12-53)||(43806835-43806876)
chr7 (12-72)||(11833408-11833468)
chr7 (12-72)||(17508875-17508935)
chr7 (12-72)||(17544279-17544339)
chr7 (12-52)||(21552140-21552180)
chr7 (8-56)||(24533566-24533614)
chr7 (12-72)||(36253320-36253380)
chr7 (12-72)||(36719231-36719291)
chr7 (12-56)||(37714870-37714914)
chr7 (8-56)||(38273295-38273343)
chr7 (12-72)||(43847363-43847423)
chr7 (12-72)||(44482549-44482609)
chr7 (12-72)||(45457227-45457287)
[»] chr5 (27 HSPs)
chr5 (12-72)||(3740722-3740782)
chr5 (12-72)||(17095912-17095972)
chr5 (126-193)||(42505175-42505242)
chr5 (16-66)||(6012736-6012786)
chr5 (12-74)||(33164140-33164202)
chr5 (132-193)||(20187409-20187470)
chr5 (126-183)||(25962204-25962261)
chr5 (132-185)||(42512768-42512821)
chr5 (12-72)||(6281434-6281494)
chr5 (12-72)||(11734516-11734576)
chr5 (12-72)||(17331718-17331778)
chr5 (12-72)||(20483576-20483636)
chr5 (12-72)||(34431454-34431514)
chr5 (8-63)||(17566137-17566192)
chr5 (126-193)||(35402314-35402381)
chr5 (15-66)||(39558177-39558228)
chr5 (12-58)||(9196702-9196748)
chr5 (12-66)||(32309892-32309946)
chr5 (8-66)||(42781397-42781455)
chr5 (12-53)||(4726688-4726729)
chr5 (12-53)||(6886863-6886904)
chr5 (12-72)||(6635638-6635698)
chr5 (12-72)||(7151186-7151246)
chr5 (8-72)||(7771488-7771552)
chr5 (12-72)||(18654172-18654232)
chr5 (12-72)||(26294000-26294060)
chr5 (126-186)||(29098077-29098137)
[»] scaffold0321 (1 HSPs)
scaffold0321 (12-72)||(6800-6861)
[»] scaffold0090 (1 HSPs)
scaffold0090 (12-72)||(11239-11299)
[»] scaffold0056 (1 HSPs)
scaffold0056 (16-72)||(74554-74610)
[»] scaffold1379 (1 HSPs)
scaffold1379 (20-66)||(756-802)
[»] scaffold0536 (1 HSPs)
scaffold0536 (12-72)||(3285-3345)
[»] scaffold0294 (1 HSPs)
scaffold0294 (12-72)||(3738-3798)
[»] scaffold0155 (1 HSPs)
scaffold0155 (12-72)||(35465-35525)
[»] scaffold0001 (1 HSPs)
scaffold0001 (12-72)||(403919-403979)


Alignment Details
Target: chr2 (Bit Score: 89; Significance: 4e-43; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 26254657 - 26254805
Alignment:
Q  42 taatacaaattcaaaatcgctaaaatcaaaaggagtaaatctgcnnnnnnnnn----ctcacatatgccttcatatatccaagttaatatgttgatagca 137  Q
    ||||||||||||||||||||||||||||||| ||||||||||||             |||||||||||||||||||||||||||||||||||||||||||    
T  26254657 taatacaaattcaaaatcgctaaaatcaaaaagagtaaatctgcaaaaaaaaaaaaactcacatatgccttcatatatccaagttaatatgttgatagca 26254756  T
Q  138 taaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||    
T  26254757 taaaacgactgggtatccatgcattcatatatgactatattcaagtctc 26254805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 9689656 - 9689710
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||||||||||| |||| ||||||||||||||||||| |||||||||    
T  9689656 attcatttaaattgatagagtacatcgatataatacaaattcaaattcgctaaaa 9689710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 7071446 - 7071509
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagga 75  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||| ||||||||    
T  7071446 attcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaagga 7071509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 15439926 - 15439867
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaat 67  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||  ||||||||||    
T  15439926 atttattcatttaaattgatagattacatcgatataatacaaattcaatgtcgctaaaat 15439867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19904939 - 19904885
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||||||||| || |||| ||||||||||||||||||||| |||||||    
T  19904939 attcatttaaattgatatagtacatcgatataatacaaattcaaaattgctaaaa 19904885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 5754732 - 5754672
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||  |||| ||||||||||||||||||| ||||||||| |||||    
T  5754732 attcattcaaattgatagaatacatcgatataatacaaattcaaattcgctaaaaacaaaa 5754672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 32015703 - 32015643
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  32015703 attcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaagcaaaa 32015643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 20607132 - 20607179
Alignment:
Q  19 taaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||||||||| |||| |||||||||||||| |||||||||    
T  20607132 taaattgatagagaacatcgatacaatacaaattcaaagtcgctaaaa 20607179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 11798209 - 11798263
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||||||||||| |||| |||| ||| |||||||||| |||||||||    
T  11798209 attcatttaaattgatagagtacatcgatacaattcaaattcaaagtcgctaaaa 11798263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4739779 - 4739719
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  4739779 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 4739719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 11798301 - 11798361
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| |||||||||||||||   ||| |||||||| || |||||||||||||||||||||    
T  11798301 atgttaatagcataaaacgacaaagtacctatgcctacaaatatgactatattcaagtctc 11798361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12705136 - 12705076
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  12705136 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 12705076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 13113465 - 13113417
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    |||||||||||||||||||||||  |||| ||||||||| |||||||||    
T  13113465 atttattcatttaaattgatagaatacatcgatataatataaattcaaa 13113417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 16136528 - 16136468
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| ||||||||||||||  ||| ||||||||| |||||    
T  16136528 attcattcaaattgatagagtacatcgatataatacaaatctaaattcgctaaaaacaaaa 16136468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 20560804 - 20560864
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  20560804 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 20560864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 25068291 - 25068231
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  25068291 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 25068231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 29543243 - 29543183
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| | ||||||| |||||    
T  29543243 attcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaa 29543183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 33012498 - 33012438
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||| ||| ||||||||| |||||    
T  33012498 attcattcaaattgatagagtacatcgatacaatacaaatttaaattcgctaaaaacaaaa 33012438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 38384137 - 38384197
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || |||| |||| |||||||||||||| ||||||||| |||||    
T  38384137 attcattcaaattgataaagcacatcgatacaatacaaattcaaattcgctaaaaacaaaa 38384197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 6510912 - 6510862
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatc 59  Q
    |||||||||| ||| ||||||||| |||||||||||||||||||| ||||||    
T  6510912 atttattcatataa-ttgatagagtacattgatataatacaaatttaaaatc 6510862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 28230769 - 28230828
Alignment:
Q  13 ttcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||| |||||| ||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  28230769 ttcattcaaattgttagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 28230828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 25068197 - 25068139
Alignment:
Q  127 tgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtct 185  Q
    |||| ||||||||||||| |  |||| |||||||| || ||||||||||||||||||||    
T  25068197 tgttaatagcataaaacggcaaggtacctatgcctacaaatatgactatattcaagtct 25068139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 54
Target Start/End: Complemental strand, 28228651 - 28228609
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattca 54  Q
    ||||||| ||||||||||||||||| |||||||| ||||||||    
T  28228651 attcattcaaattgatagagaacatcgatataatgcaaattca 28228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 187
Target Start/End: Original strand, 4604080 - 4604141
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctct 187  Q
    ||||| ||||||||||||| |    ||||||||||| || ||||||||||||||||||||||    
T  4604080 atgttaatagcataaaacggcaaaatatctatgcctacaaatatgactatattcaagtctct 4604141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 15 - 72
Target Start/End: Complemental strand, 20570405 - 20570348
Alignment:
Q  15 catttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||| |  ||||||||| ||| |||||||||||||||||||| |||||    
T  20570405 catttaagttgataaaatacattgatacaattcaaattcaaaatcgctaaaaacaaaa 20570348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 27023820 - 27023865
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||||||| |||| ||||||| |||| ||||||||||||||||    
T  27023820 atttattcattcaaatcgatagagtacatcgatataatacaaattc 27023865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 11937545 - 11937597
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||| |||||||||||||  ||||||||| |||||    
T  11937545 aaattgatagagtacatcgatacaatacaaattcaatttcgctaaaaacaaaa 11937597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 11942818 - 11942758
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||| ||||||| || | ||||||||||||||||||| |||| |||| |||||    
T  11942818 attcattcaaatcgatagagtacgtcgatataatacaaattcaaattcgcaaaaaacaaaa 11942758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 12890796 - 12890848
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  12890796 aaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 12890848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13548590 - 13548650
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||||||||| || |||| |||| ||||| |||| ||||| ||||||| |||||    
T  13548590 attcatttaaattgatatagtacatcgatacaatacgaatttaaaattgctaaaaacaaaa 13548650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13878680 - 13878740
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||  ||| ||||||||| |||||    
T  13878680 attcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaacaaaa 13878740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 14018805 - 14018865
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||  ||| ||||||||| |||||    
T  14018805 attcattcaaattgatagagtacatcgatacaatacaaatcaaaattcgctaaaaacaaaa 14018865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 17267805 - 17267857
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| ||||||||| ||||||||| |||| || |||||| |||||    
T  17267805 aaattgatagagtacattgatacaatacaaatccaaattcactaaaaacaaaa 17267857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17767241 - 17767301
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| || |||||| | |  |||| |||||||||||||| |||||    
T  17767241 attcatttaaattgatagagtactttgatacattttaaatccaaaatcgctaaaaacaaaa 17767301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 17767363 - 17767399
Alignment:
Q  150 gtatctatgcctccatatatgactatattcaagtctc 186  Q
    |||||||||||| || |||||||||||||||||||||    
T  17767363 gtatctatgcctacaaatatgactatattcaagtctc 17767399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 27096139 - 27096079
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||| ||| |||| |||| |||||||||||||| || |||||| |||||    
T  27096139 attcattcaaattgatggagtacatagatacaatacaaattcaaattcactaaaaacaaaa 27096079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 28261576 - 28261636
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||| ||||| |||||    
T  28261576 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgataaaaacaaaa 28261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 35333955 - 35333895
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||| ||||| |||||    
T  35333955 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaa 35333895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 36868458 - 36868398
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| | || ||||||||| ||||| ||| ||||||||| |||||    
T  36868458 attcattcaaattgatagagtatatcgatataatataaatttaaattcgctaaaaacaaaa 36868398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 44589322 - 44589262
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||  | || |||| |||||||||||||| ||||||||| |||||    
T  44589322 attcattcaaattgatagaataaatcgatacaatacaaattcaaattcgctaaaaacaaaa 44589262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 44984544 - 44984606
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagg 74  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||| |||||| |||||||    
T  44984544 attcatttaaattgatagagtatattgatacaatacaaattcaaaatctctaaaaacaaaagg 44984606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3457372 - 3457312
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||| ||||||||| |||||    
T  3457372 attcatttaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaa 3457312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 53155109 - 53155169
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  53155109 attcatttaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 53155169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 55455312 - 55455258
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |||||||||    
T  55455312 attcattcaaattgatagagtacattgatacaatacaaattcaaattcgctaaaa 55455258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 1074573 - 1074633
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  1074573 attcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaa 1074633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13701681 - 13701741
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  13701681 attcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 13701741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 28929209 - 28929273
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||| ||| ||||| |||||    
T  28929209 atttgttcatttaaattgatagatcacatcgatataatacaaattcaaattcgttaaaaacaaaa 28929273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 39610657 - 39610597
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||| |||||| ||||||||| |||||||||||||| ||||||||| |||||    
T  39610657 attcattcaaattaatagagtacattgatacaatacaaattcaaattcgctaaaaacaaaa 39610597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 40883554 - 40883614
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||| |||||    
T  40883554 attcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaa 40883614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 41868012 - 41868072
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  41868012 attcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 41868072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 72
Target Start/End: Original strand, 32080443 - 32080502
Alignment:
Q  13 ttcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  32080443 ttcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 32080502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 66
Target Start/End: Original strand, 54238697 - 54238752
Alignment:
Q  11 tattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||| ||||||||| || ||||||||| |||||||||||||| |||||||||    
T  54238697 tattcattcaaattgataaagtacattgatacaatacaaattcaaattcgctaaaa 54238752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 2192528 - 2192474
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| |||||||||    
T  2192528 attcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaa 2192474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 20200743 - 20200784
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  20200743 attcattcaaattgatagagtacattgatataatacaaattc 20200784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 20202925 - 20202966
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  20202925 attcattcaaattgatagagtacattgatataatacaaattc 20202966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4082158 - 4082098
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  4082158 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaccaaaa 4082098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 4817555 - 4817619
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||||||||||| |||||| || |||| ||||||||| ||| ||||| |||||    
T  4817555 atttattcattcaaattgatagagtacattggtacaatataaattcaaattcgttaaaaacaaaa 4817619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 14585912 - 14585852
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||  ||| |||||||||||||| ||||||||| |||||    
T  14585912 attcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaa 14585852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 30155969 - 30156029
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  30155969 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 30156029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 31270763 - 31270699
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||| ||||||| ||||  ||| |||||||||||||| ||||||||| |||||    
T  31270763 atttattcattcaaatggatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaa 31270699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 40012947 - 40013011
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||||||||||| | || |||| ||||||||| |||| ||||||||| |||||    
T  40012947 atttattcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacaaaa 40013011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 53962449 - 53962393
Alignment:
Q  137 ataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaata 193  Q
    ||||||| || | |||||||||||| || |||||||||||||||||||| |||||||    
T  53962449 ataaaacaacagagtatctatgcctacaaatatgactatattcaagtctttgaaata 53962393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 55090378 - 55090438
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  55090378 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 55090438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 30156062 - 30156129
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaata 193  Q
    ||||| |||||||||||||||   |||| ||||||| || ||||||||||||||| ||||| ||||||    
T  30156062 atgttaatagcataaaacgacaaagtatatatgcctacaaatatgactatattcatgtctccgaaata 30156129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 19148425 - 19148371
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||| | |||| |||| |||||||||||||| |||||||||    
T  19148425 attcattcaaattgatagtgtacatcgatacaatacaaattcaaattcgctaaaa 19148371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 24483375 - 24483429
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  24483375 attcattcaaattgatagagtacatcgatagaatacaaatccaaattcgctaaaa 24483429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Complemental strand, 25084459 - 25084413
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaat 58  Q
    |||||||||||||||||||| | ||| ||| ||||||||||||||||    
T  25084459 attcatttaaattgatagagtatattaatacaatacaaattcaaaat 25084413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 32080535 - 32080601
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaat 192  Q
    ||||| ||||||||||| |||  |||| ||| |||| || ||||||||||||||||||||| |||||    
T  32080535 atgttaatagcataaaaagacaaggtacctacgcctacaaatatgactatattcaagtctccgaaat 32080601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 48401542 - 48401488
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| |||| ||||||||| |||||||||    
T  48401542 attcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaa 48401488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 21803964 - 21803919
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||||||| |||||||||||| |||| |||||||| |||||||    
T  21803964 atttattcattcaaattgatagagtacatcgatataatgcaaattc 21803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 46926837 - 46926792
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||||||| |||||||||||| |||| |||||||| |||||||    
T  46926837 atttattcattcaaattgatagagtacatcgatataatgcaaattc 46926792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 33637751 - 33637691
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| ||||||||||| | |  |||| |||||||| || |||||||||||||||||||||    
T  33637751 atgttaatagcataaaatggcaaggtacctatgcctacaaatatgactatattcaagtctc 33637691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 38379429 - 38379477
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||| ||| ||||||||| || ||||||||| ||||||||||||||    
T  38379429 atttatttattcaaattgataaagtacattgatacaatacaaattcaaa 38379477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 48212787 - 48212723
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||  ||||||||||| |||| |||  |||||||||||||| ||| ||||| |||||    
T  48212787 atttattcattccaattgatagagtacatcgatgcaatacaaattcaaagtcgttaaaaacaaaa 48212723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 48652221 - 48652281
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| ||||||||||||  |  |||| |||||||| || |||||||||||||||||||||    
T  48652221 atgttaatagcataaaacagcaaggtacctatgcctacaaatatgactatattcaagtctc 48652281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 48855327 - 48855267
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| || | ||||||||| |||| ||||||||| |||||    
T  48855327 attcattcaaattgatagagtacatcgaaacaatacaaatccaaattcgctaaaaacaaaa 48855267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 49627783 - 49627843
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||| |||| |||| ||||||||| |||||    
T  49627783 attcattcaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaacaaaa 49627843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 50981145 - 50981205
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||  ||||| |||||||| ||| ||||||||| |||||    
T  50981145 attcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaacaaaa 50981205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 51084279 - 51084339
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||  ||||| |||||||| ||| ||||||||| |||||    
T  51084279 attcattcaaattgatagagtacatcaatatagtacaaatttaaagtcgctaaaaacaaaa 51084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2234149 - 2234209
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||| |||||    
T  2234149 attcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaacaaaa 2234209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 31202898 - 31202835
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagga 75  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||| ||||||||    
T  31202898 attcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaagga 31202835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 30026557 - 30026615
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  30026557 atttattcattcaaattgatagagtatattgatacaatacaaattcaaattcgctaaaa 30026615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2024903 - 2024963
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  2024903 attcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaa 2024963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 31407430 - 31407490
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || ||||||||| |||||||||||||| ||||||||| |||||    
T  31407430 attcattcaaattgatatagtacattgatacaatacaaattcaaattcgctaaaaacaaaa 31407490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4757598 - 4757538
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| |||||||||  ||| ||||||||| |||||    
T  4757598 attcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaacaaaa 4757538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 9502018 - 9501958
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||  ||||||||| |||||    
T  9502018 attcattcaaattgatagagtacatcgatacaatacaaattcaagttcgctaaaaacaaaa 9501958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 10334926 - 10334866
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| |||  ||||||||| ||||||||| |||||    
T  10334926 attcattcaaattgatagagtacattgatacaatgtaaattcaaattcgctaaaaacaaaa 10334866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 10632820 - 10632860
Alignment:
Q  21 aattgatagagaacattgatataatacaaattcaaaatcgc 61  Q
    ||||||||||| |||||||||||||||||||||||| ||||    
T  10632820 aattgatagagtacattgatataatacaaattcaaattcgc 10632860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13575888 - 13575948
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||| |||||| || |||| ||||||||| |||||    
T  13575888 attcatttaaattgatagagtacatcgatacaatacatatccaaagtcgctaaaaacaaaa 13575948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 14600373 - 14600437
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| ||||| |||||| |||| |||| |||||||||| ||| ||||||||| |||||    
T  14600373 atttattcattcaaattaatagagtacatcgatacaatacaaatttaaattcgctaaaaacaaaa 14600437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 28296794 - 28296854
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  28296794 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 28296854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 9627870 - 9627831
Alignment:
Q  21 aattgatagagaacattgatataatacaaattcaaaatcg 60  Q
    ||||||||||| ||||||||| ||||||||||||||||||    
T  9627870 aattgatagagtacattgatacaatacaaattcaaaatcg 9627831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5526256 - 5526198
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||| |||||||||||| |||| |||| |||| || |||||| |||||||||    
T  5526256 atttattcattcaaattgatagagtacatcgatacaatataagttcaaattcgctaaaa 5526198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 24790849 - 24790903
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  24790849 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaa 24790903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 15286711 - 15286772
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatac-aaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| ||||| ||| ||||| |||| |||| ||||||||| |||||    
T  15286711 attcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaacaaaa 15286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 15467080 - 15467141
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatac-aaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| ||||| ||| ||||| |||| |||| ||||||||| |||||    
T  15467080 attcatttaaattgatagagtacatttatacaatacaaaatccaaattcgctaaaaacaaaa 15467141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 24210691 - 24210630
Alignment:
Q  11 tattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||| |||||||||||| |||| |||| |||| ||||||||| | ||||||| |||||    
T  24210691 tattcattcaaattgatagagtacatcgatacaataaaaattcaaatttgctaaaaacaaaa 24210630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 32413219 - 32413178
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||| |||||||||||| ||||||||||||| |||||||    
T  32413219 attcattcaaattgatagagtacattgatataatgcaaattc 32413178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 4928367 - 4928303
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||| || ||||||||| ||||  |||||||||||||||||| ||| ||||| |||||    
T  4928367 atttattaattcaagttgatagagtacatcaatataatacaaattcaaagtcgttaaaaacaaaa 4928303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 7256416 - 7256464
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    |||||||||||||||||||| | | |||||||| ||| |||||||||||    
T  7256416 atttattcatttaaattgatcgtgtacattgatgtaaaacaaattcaaa 7256464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 26673461 - 26673521
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| | || ||||  ||||||||| ||||| ||||||| |||||    
T  26673461 attcatttaaattgatagagtatatcgatacgatacaaatttaaaatagctaaaaacaaaa 26673521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 37613086 - 37613026
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| | || |||| |||||||||||||| ||| ||||| |||||    
T  37613086 attcattcaaattgatagagtatatcgatacaatacaaattcaaattcgttaaaaacaaaa 37613026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 43936855 - 43936919
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||  ||||||||||| | || |||| |||||||||||||| || |||||| |||||    
T  43936855 atttattcattcgaattgatagagtagatcgatacaatacaaattcaaattcactaaaaacaaaa 43936919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 32616530 - 32616590
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| ||||||||||||||||||| ||||||||| |||||    
T  32616530 attcattcaaattgatagagtacatcgatataatacaaattcaaattcgctaaaaacaaaa 32616590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 29266575 - 29266638
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagga 75  Q
    ||||||| |||||||||||| ||||||||| |||||||||||||| |||||| || ||||||||    
T  29266575 attcattcaaattgatagagtacattgatacaatacaaattcaaattcgctagaaacaaaagga 29266638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 7060764 - 7060704
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||| |||||    
T  7060764 attcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaa 7060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 8517130 - 8517190
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| ||||||||| |||||    
T  8517130 attcattcaaattgatagagtacattgatacaatacaaatccaaattcgctaaaaacaaaa 8517190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 18502513 - 18502573
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  18502513 attcatttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 18502573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 27395266 - 27395206
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||||| |||||    
T  27395266 attcattcaaattgatagagttcatcgatataatacaaattcaaattcgctaaaaacaaaa 27395206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 626225 - 626290
Alignment:
Q  7 aatttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||| ||||||| |||||||||||| |||| |||| |||||||||||||| | ||||||| |||||    
T  626225 aattcattcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaa 626290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 477692 - 477752
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||| ||||||| ||||||||| | |||||||||||| ||||||||| |||||    
T  477692 attcattcaaatcgatagagtacattgatacagtacaaattcaaattcgctaaaaacaaaa 477752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 6882394 - 6882334
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  6882394 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 6882334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 6912130 - 6912070
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||  ||| |||||||||||||| ||||||||| |||||    
T  6912130 attcattcaaattgatagagtacatcaatacaatacaaattcaaattcgctaaaaacaaaa 6912070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 20887428 - 20887488
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||| |||| |||| |||| ||||||||| |||||    
T  20887428 attcatttaaattgatagagtacatcgatacaatataaatccaaattcgctaaaaacaaaa 20887488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 24611469 - 24611529
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| |||||||||  ||| ||||||||| |||||    
T  24611469 attcattcaaattgatagagtacattgatacaatacaaatctaaattcgctaaaaacaaaa 24611529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 28837505 - 28837445
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  28837505 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 28837445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 42198003 - 42197943
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| | ||||||| |||||    
T  42198003 attcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaa 42197943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 45350741 - 45350801
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  45350741 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 45350801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 45360220 - 45360280
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  45360220 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 45360280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 46268119 - 46268071
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| ||||    
T  46268119 atttattcatttaaattgatagagtacatcgatacaatacaaatacaaa 46268071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 56062424 - 56062364
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || ||||| ||| |||||||||||||| ||||||||| |||||    
T  56062424 attcattaaaattgatatagtacattcatacaatacaaattcaaagtcgctaaaaacaaaa 56062364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 56236502 - 56236562
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||| || |||||||||||||| |||||    
T  56236502 attcattcaaattgatagagtacatcgatacaatacatatccaaaatcgctaaaaacaaaa 56236562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 37431601 - 37431552
Alignment:
Q  17 tttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||||||| | || |||| |||||||||||||||| |||||||    
T  37431601 tttaaattgatagagtatatcgatacaatacaaattcaaaattgctaaaa 37431552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3159412 - 3159352
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || |||| |||| |||||||||||||| || |||||| |||||    
T  3159412 attcattcaaattgataaagtacatcgatacaatacaaattcaaagtcactaaaaacaaaa 3159352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 3171291 - 3171339
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||||||| ||||||||| || || |||||| ||||||||||||||    
T  3171291 atttattcattcaaattgatatagtacgttgatacaatacaaattcaaa 3171339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 8712962 - 8712898
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||||||||||| |||| |||| |||||||||  ||| || |||||| |||||    
T  8712962 atttattcattcaaattgatagagtacatcgatacaatacaaatctaaattcactaaaaacaaaa 8712898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 13965993 - 13965933
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| || |||||| |||||    
T  13965993 attcattcaaattgatagagtacatcgatacaatacaaatccaaattccctaaaaacaaaa 13965933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 20399573 - 20399633
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||  |||| |||| |||||||||||||| |||| |||| |||||    
T  20399573 attcattcaaattgatagactacatcgatacaatacaaattcaaattcgccaaaagcaaaa 20399633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 22757442 - 22757382
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| ||||||||||||| ||  ||| |||||||| || ||||||||||||||| |||||    
T  22757442 atgttaatagcataaaacggctaagtacctatgcctacaaatatgactatattcatgtctc 22757382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 24100583 - 24100523
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||  ||||||||| |||||    
T  24100583 attcattcaaattgatagagtacatcgatacaatacaaatccaatttcgctaaaaacaaaa 24100523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 24568386 - 24568446
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||  |||| |||| |||| ||||||||| ||||||||| |||||    
T  24568386 attcattcaaattgatagattacatcgatacaatataaattcaaattcgctaaaaacaaaa 24568446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 27091162 - 27091114
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||||||| |||||||||||| |||| |||| ||||||||| ||||    
T  27091162 atttattcattcaaattgatagagtacatcgatacaatacaaatccaaa 27091114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 31522396 - 31522336
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||| | |||| ||||||||| |||||    
T  31522396 attcattcaaattgatagagtacatcgatacaatacaagtccaaattcgctaaaaacaaaa 31522336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 31932697 - 31932637
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || |||| || | |||||||||||||||||| ||||| |||||    
T  31932697 attcattcaaattgataaagtacatcgacacaatacaaattcaaaatcgttaaaaacaaaa 31932637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 34668619 - 34668575
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaatt 52  Q
    ||||||||||||||||||||| || |||| |||||||| ||||||    
T  34668619 atttattcatttaaattgataaagtacatcgatataatgcaaatt 34668575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 38943828 - 38943888
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| ||||  |||||||| |||||    
T  38943828 attcattcaaattgatagagtacatcgatacaatacaaatccaaatccgctaaaaacaaaa 38943888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 38943921 - 38943981
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| |||||||||||||||   |||| ||||||| || ||||||||||||||| |||||    
T  38943921 atgttaatagcataaaacgacaaagtatttatgcctacaaatatgactatattcatgtctc 38943981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 43244052 - 43244112
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||  |||| ||||||||| |||| ||||||||| |||||    
T  43244052 attcattcaaattgatagagtacaccgatacaatacaaatccaaattcgctaaaaacaaaa 43244112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 30813414 - 30813348
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaat 192  Q
    ||||| ||||||||||||| |  |||| |||||||| || |||||||||||||||||||||||||||    
T  30813414 atgttaatagcataaaacgccaaggtacctatgcctacaaatatgactatattcaagtctctgaaat 30813348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 5146376 - 5146316
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  5146376 attcattcaaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaa 5146316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 30813507 - 30813447
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  30813507 attcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 30813447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 23654699 - 23654636
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagga 75  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| ||||||||    
T  23654699 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaagga 23654636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 31705615 - 31705561
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||||||||||| |||| |||| |||||||||||||| | |||||||    
T  31705615 attcatttaaattgatagagtacatcgatacaatacaaattcaaattggctaaaa 31705561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 31804647 - 31804602
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||    
T  31804647 atttattcatttaaattgatagagtacatcgatataataaaaattc 31804602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 2304509 - 2304569
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||  |||||||||| ||| ||||||||| |||||    
T  2304509 attcatttaaattgatagagtacatcgatgcaatacaaatttaaattcgctaaaaacaaaa 2304569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 4394220 - 4394160
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||||||||| |||| | ||||||| |||||    
T  4394220 attcattcaaattgatagagtacattgatacaatacaaatccaaatttgctaaaaacaaaa 4394160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 6295920 - 6295980
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| | ||||||| |||||    
T  6295920 attcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaa 6295980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 6302730 - 6302790
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| | ||||||| |||||    
T  6302730 attcattcaaattgatagagtacatcgatacaatacaaattcaaatttgctaaaaacaaaa 6302790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 8693338 - 8693402
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||||||||||| |||| |||| ||||||||| |||| || |||||| |||||    
T  8693338 atttattcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaa 8693402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 12481143 - 12481203
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| ||||||||||||| |  |||| |||||||| || |||||||||||||||||||||    
T  12481143 atgttaatagcataaaacggcaaggtacctatgcctacaaatatgactatattcaagtctc 12481203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 14782828 - 14782886
Alignment:
Q  14 tcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  14782828 tcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 14782886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 31748390 - 31748345
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||||||| |||||||||||| |||| |||||||| |||||||    
T  31748390 atttattcattcaaattgatagagtacatcgatataatgcaaattc 31748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 2488576 - 2488528
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||||||| |||||||||||| |||| |||| ||||||||| ||||    
T  2488576 atttattcattcaaattgatagagtacatcgatacaatacaaatccaaa 2488528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 12653989 - 12654049
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||| | |||| ||||||||| |||||    
T  12653989 attcattcaaattgatagagtacatcgatacaatacaattccaaagtcgctaaaaacaaaa 12654049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16328765 - 16328821
Alignment:
Q  16 atttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||| ||||  ||| |||||||||||||| |||||| || |||||    
T  16328765 atttaaattgatagagtacatccatacaatacaaattcaaagtcgctataaacaaaa 16328821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 16352224 - 16352280
Alignment:
Q  16 atttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||| ||||| ||| |||||||||| ||| |||||| || |||||    
T  16352224 atttaaattgatagagtacattcatacaatacaaattaaaagtcgctataaacaaaa 16352280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 19402523 - 19402583
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||| ||||| |||||    
T  19402523 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaa 19402583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Original strand, 25689520 - 25689578
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||| |||||||||    
T  25689520 atttattcattcaaattgatagagtatattgatacaatacaaattcaaagtcgctaaaa 25689578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 27535148 - 27535087
Alignment:
Q  11 tattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  27535148 tattcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 27535087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 14265725 - 14265673
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| ||||||||| |||||||||||||| ||||||||| |||||    
T  14265725 aaattgatagagtacattgatacaatacaaattcaaattcgctaaaaacaaaa 14265673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 25032774 - 25032834
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  25032774 attcattcaaattgatagagtacatcgatacaatacaaattcaaagtcgctaaaaacaaaa 25032834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 29551432 - 29551496
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||||||  |||| |||| ||||||| |||||| ||||||||| |||||    
T  29551432 atttattcatttaaattgatagattacatcgatacaatacaatttcaaagtcgctaaaaacaaaa 29551496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 51418434 - 51418374
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| ||||||||||||||||||  | ||||||| |||||    
T  51418434 attcatttaaattgatagagtacatcgatataatacaaattcaagtttgctaaaaacaaaa 51418374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 23257521 - 23257476
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    |||||||||||||||||||||||| |||| |||||||| |||||||    
T  23257521 atttattcatttaaattgatagagtacatcgatataatgcaaattc 23257476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 12872056 - 12871996
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||||||||| || | ||||||||| |||||    
T  12872056 attcattcaaattgatagagtacattgatacaatacaaatccatattcgctaaaaacaaaa 12871996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 13488207 - 13488267
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  13488207 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 13488267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 15390919 - 15390983
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| || ||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  15390919 atttattcattcaacttgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 15390983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 32784521 - 32784469
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  32784521 aaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 32784469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 33144827 - 33144887
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||||||||| |  |||| |||||||||||||||||  |||||||||| |||||    
T  33144827 attcatttaaattgataaaatacatcgatataatacaaattcatgatcgctaaaaacaaaa 33144887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 33938715 - 33938775
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  33938715 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 33938775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 12 - 71
Target Start/End: Original strand, 10188561 - 10188620
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaa 71  Q
    ||||||| ||||| |||||| |||||| || |||||||||||||| ||||||||| ||||    
T  10188561 attcattcaaattaatagagtacattggtacaatacaaattcaaagtcgctaaaaacaaa 10188620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Original strand, 4882048 - 4882102
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  4882048 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaa 4882102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Complemental strand, 17348023 - 17347965
Alignment:
Q  14 tcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||| |||| ||||||||| ||||| ||| || |||||| |||||    
T  17348023 tcatttaaattgatagagtacatcgatataatataaatttaaattctctaaaaacaaaa 17347965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 29938650 - 29938596
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||| || |||||| |||| |||| |||||||||||||| |||||||||    
T  29938650 attcatttaagtttatagagtacatcgatacaatacaaattcaaagtcgctaaaa 29938596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 125 - 186
Target Start/End: Complemental strand, 47551438 - 47551377
Alignment:
Q  125 tatgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    |||||| ||||||||||| | |   |||||||||||| || |||||||||||||||||||||    
T  47551438 tatgttaatagcataaaatggcaaagtatctatgcctacaaatatgactatattcaagtctc 47551377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Original strand, 4870806 - 4870866
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| |||||||||||||||   ||||||||||||  | ||||||||||||||| |||||    
T  4870806 atgttaatagcataaaacgacaaagtatctatgcctgtaaatatgactatattcatgtctc 4870866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 15790955 - 15791007
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||| || |||| |||| |||||||||||||| ||||||||| |||||    
T  15790955 aaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 15791007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 28677818 - 28677870
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  28677818 aaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 28677870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 29205718 - 29205658
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||| |||| |||| ||||||||| |||||    
T  29205718 attcattcaaattgatagagtacatcgatacaataaaaatccaaattcgctaaaaacaaaa 29205658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 33486707 - 33486767
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||| ||||| |||||    
T  33486707 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgttaaaaacaaaa 33486767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 37822042 - 37822094
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  37822042 aaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 37822094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 44517598 - 44517538
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| || |||||| |||||    
T  44517598 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcactaaaaacaaaa 44517538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000004; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 5684811 - 5684751
Alignment:
Q  6 caatttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||||| |||||||||||| |||  |||| |||||||||||||| |||||||||    
T  5684811 caatttattcattcaaattgatagagtacaccgatacaatacaaattcaaactcgctaaaa 5684751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 5709861 - 5709801
Alignment:
Q  6 caatttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||||| |||||||||||| |||  |||| |||||||||||||| |||||||||    
T  5709861 caatttattcattcaaattgatagagtacaccgatacaatacaaattcaaactcgctaaaa 5709801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 6667845 - 6667785
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  6667845 attcattcaaattgatagagcacatcgatacaatacaaattcaaattcgctaaaaacaaaa 6667785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 24988171 - 24988231
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||  |||| |||||||||||||| |||| ||||||||| |||||    
T  24988171 attcatttaaattgatagaatacatcgatataatacaaatccaaattcgctaaaaacaaaa 24988231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 1280816 - 1280868
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  1280816 aaattgatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaa 1280868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3266824 - 3266764
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || ||||||||| |||||||||||||| ||| ||||| |||||    
T  3266824 attcattcaaattgataaagtacattgatacaatacaaattcaaattcgttaaaaacaaaa 3266764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 8180251 - 8180191
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||| ||| ||||||||| |||| ||||||||| |||||    
T  8180251 attcattcaaattgatagagtacattcatacaatacaaatccaaattcgctaaaaacaaaa 8180191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 21991112 - 21991052
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  21991112 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 21991052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 24319894 - 24319954
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| |||| |||| |||||||||  ||| ||||||||| |||||    
T  24319894 attcatttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaa 24319954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 26161408 - 26161345
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| |||||||||||| | || |||| |||||||||||||| ||||||||| |||||    
T  26161408 atttattcattcaaattgatagagtatatcgata-aatacaaattcaaattcgctaaaaacaaaa 26161345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 27535881 - 27535833
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    |||||||||||||||||||||||| |||| |||| ||||||||| ||||    
T  27535881 atttattcatttaaattgatagagtacatcgatacaatacaaatacaaa 27535833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 36579020 - 36579072
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||| ||||| |||||||| ||||||||| ||||||||| |||||    
T  36579020 aaattgatagagtacattaatataatataaattcaaattcgctaaaaacaaaa 36579072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 39532646 - 39532706
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||  |||| |||||||||||||| ||||||||| |||||    
T  39532646 attcattcaaattgatagagtacaccgatacaatacaaattcaaattcgctaaaaacaaaa 39532706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 42603450 - 42603510
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||| ||||||||| ||||||||| |||||    
T  42603450 attcattcaaattgatagagtacatcgatacaatataaattcaaattcgctaaaaacaaaa 42603510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 45482412 - 45482352
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| |||||||||||||||   |||||||| ||| || |||||||||||||||||||||    
T  45482412 atgttaatagcataaaacgacaaagtatctatacctacaaatatgactatattcaagtctc 45482352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 14762471 - 14762416
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgcta 63  Q
    ||||||||||| |||||||||||  |||||||||  ||||||||||||| ||||||    
T  14762471 atttattcattcaaattgatagattacattgatactatacaaattcaaagtcgcta 14762416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 13 - 72
Target Start/End: Complemental strand, 41288405 - 41288346
Alignment:
Q  13 ttcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||| |||||||||||| |||| |||| |||||||||||||| || |||||| |||||    
T  41288405 ttcattcaaattgatagagtacatcgatacaatacaaattcaaattcactaaaaacaaaa 41288346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 5238388 - 5238330
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||||||| ||||||| |||| ||||  ||| |||||||||||||||||| |||||    
T  5238388 atttattcattcaaattgacagagtacatccatacaatacaaattcaaaatcgttaaaa 5238330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 29804359 - 29804405
Alignment:
Q  7 aatttattcatttaaattgatagagaacattgatataatacaaattc 53  Q
    |||| ||||||| |||||||||||| |||| ||||||||||||||||    
T  29804359 aattcattcattcaaattgatagagtacatcgatataatacaaattc 29804405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 37375727 - 37375788
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagg 74  Q
    ||||||| |||||||||||| ||| ||||| ||||||||| |||| ||||||||| |||||||    
T  37375727 attcattcaaattgatagagtaca-tgatacaatacaaatccaaattcgctaaaaacaaaagg 37375788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 45482502 - 45482448
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| |||||||||    
T  45482502 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaa 45482448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 19895369 - 19895410
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||| |||||||||||| ||||||||||||| |||||||    
T  19895369 attcattcaaattgatagagtacattgatataatgcaaattc 19895410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 25531795 - 25531738
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagt 183  Q
    ||||| |||||||||| | || | |||||||||||| || ||||||||||||||||||    
T  25531795 atgttaatagcataaaccaacagagtatctatgcctacaaatatgactatattcaagt 25531738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 43806835 - 43806876
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    |||||||||||||||||||| |||| |||||||| |||||||    
T  43806835 attcatttaaattgatagagtacatcgatataatgcaaattc 43806876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 11833468 - 11833408
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||  | ||||||||| |||||    
T  11833468 attcattcaaattgatagagtacatcgatacaatacaaattcgcattcgctaaaaacaaaa 11833408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17508875 - 17508935
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||| ||||||||||||||| |||| |||| |||||||||  ||| ||||||||| |||||    
T  17508875 attcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaa 17508935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 17544339 - 17544279
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||| ||||||||||||||| |||| |||| |||||||||  ||| ||||||||| |||||    
T  17544339 attcttttaaattgatagagtacatcgatacaatacaaatctaaattcgctaaaaacaaaa 17544279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 52
Target Start/End: Original strand, 21552140 - 21552180
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaatt 52  Q
    |||||||||||||||||||| | |||||| |||||||||||    
T  21552140 attcatttaaattgatagagtatattgatgtaatacaaatt 21552180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 24533566 - 24533614
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||||| | |||||||||||| ||||  ||||||||||||||||||    
T  24533566 atttattcaatcaaattgatagagtacatcaatataatacaaattcaaa 24533614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 36253380 - 36253320
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| | ||||||| |||||    
T  36253380 attcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaacaaaa 36253320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 36719231 - 36719291
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||||||  ||| |||| ||||||||| |||| ||||||||| |||||    
T  36719231 attcattcaaattgatagagtgcatcgatacaatacaaatccaaattcgctaaaaacaaaa 36719291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 56
Target Start/End: Complemental strand, 37714914 - 37714870
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    |||||||||||||||  ||| ||||||||| ||||||||||||||    
T  37714914 attcatttaaattgaccgagcacattgatacaatacaaattcaaa 37714870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 38273343 - 38273295
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaa 56  Q
    ||||||||||||||||||| |||| ||||||||| |||| |||| ||||    
T  38273343 atttattcatttaaattgacagagtacattgatacaatataaatccaaa 38273295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 43847423 - 43847363
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| | || |||| ||||||||| |||| ||||||||| |||||    
T  43847423 attcattcaaattgatagagtatatcgatacaatacaaatccaaattcgctaaaaacaaaa 43847363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 44482549 - 44482609
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| ||||||||| |||| |||| | ||||||| |||||    
T  44482549 attcattcaaattgatagagtacatcgatataatataaatccaaatttgctaaaaacaaaa 44482609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 45457227 - 45457287
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| || | | |||||||||||| ||||||||| |||||    
T  45457227 attcattcaaattgatagagtacatcgacacagtacaaattcaaattcgctaaaaacaaaa 45457287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000004; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3740782 - 3740722
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| ||||||||| ||| |||||||||| ||||||||| |||||    
T  3740782 attcattcaaattgatagagtacattgatacaatccaaattcaaattcgctaaaaacaaaa 3740722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 17095912 - 17095972
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  17095912 attcattcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 17095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 42505175 - 42505242
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaata 193  Q
    ||||| ||||||| ||||||| | |||||||||||| || ||||||||||||| |||||| |||||||    
T  42505175 atgttaatagcatgaaacgacagagtatctatgcctacaaatatgactatattaaagtctttgaaata 42505242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 6012736 - 6012786
Alignment:
Q  16 atttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||||||| ||||| ||| |||||||||||||| |||||||||    
T  6012736 atttaaattgatagagtacattaatacaatacaaattcaaagtcgctaaaa 6012786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 33164140 - 33164202
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaagg 74  Q
    ||||||| ||||||| |||| |||| ||||||||||||||||||| | ||||||| |||||||    
T  33164140 attcattcaaattgacagagtacatcgatataatacaaattcaaatttgctaaaaacaaaagg 33164202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 20187409 - 20187470
Alignment:
Q  132 atagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaata 193  Q
    |||||||||||| || | |||||||||||| || |||| |||||||| ||||||||||||||    
T  20187409 atagcataaaaccacagagtatctatgcctacaaatattactatatttaagtctctgaaata 20187470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 25962261 - 25962204
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagt 183  Q
    ||||| |||||||||||||||   |||||||||||| || ||||||||||||||||||    
T  25962261 atgttaatagcataaaacgacaaagtatctatgcctacaaatatgactatattcaagt 25962204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 185
Target Start/End: Original strand, 42512768 - 42512821
Alignment:
Q  132 atagcataaaacgactgggtatctatgcctccatatatgactatattcaagtct 185  Q
    ||||||||||||||| | |||||||||||| || ||||||||||||| ||||||    
T  42512768 atagcataaaacgacagagtatctatgcctacaaatatgactatattaaagtct 42512821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 6281494 - 6281434
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| | || |||| |||||||||||||| ||||||||| |||||    
T  6281494 attcattcaaattgatagagtatatcgatacaatacaaattcaaattcgctaaaaacaaaa 6281434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 11734516 - 11734576
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||||||| || |||| |||| |||||||||||||| ||||||||| |||||    
T  11734516 attcattcaaattgataaagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 11734576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 17331778 - 17331718
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  17331778 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 17331718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 20483636 - 20483576
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||| |||||| |||| |||||||||||||| |||| ||||||||| |||||    
T  20483636 attcattcaaattaatagagtacatcgatataatacaaatccaaattcgctaaaaacaaaa 20483576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 34431514 - 34431454
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  34431514 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 34431454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 17566137 - 17566192
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgcta 63  Q
    ||||||||||| |||||||||||  |||||||||  ||||||||||||| ||||||    
T  17566137 atttattcattcaaattgatagattacattgatactatacaaattcaaagtcgcta 17566192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 35402381 - 35402314
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctctgaaata 193  Q
    ||||| |||||||||||| | || |||  ||||||| || ||||||||||||||||||||||| ||||    
T  35402381 atgttaatagcataaaacaattgagtagatatgcctacaaatatgactatattcaagtctctggaata 35402314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 39558177 - 39558228
Alignment:
Q  15 catttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||| ||||| |||||| ||||||||||||||||||| |||| |||||||||    
T  39558177 cattcaaattaatagagtacattgatataatacaaatccaaagtcgctaaaa 39558228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 58
Target Start/End: Original strand, 9196702 - 9196748
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaat 58  Q
    ||||||| |||||||||||| |||||||||||||| ||||| |||||    
T  9196702 attcattcaaattgatagagtacattgatataatataaatttaaaat 9196748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 66
Target Start/End: Complemental strand, 32309946 - 32309892
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| |||||||||||| |||| ||||||||| ||||||||| ||| |||||    
T  32309946 attcattcaaattgatagagtacatcgatataatataaattcaaagtcgttaaaa 32309892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 42781455 - 42781397
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    ||||||| ||| ||||||||||||  ||| |||| |||||||||||||| |||||||||    
T  42781455 atttatttattcaaattgatagagtgcatcgatacaatacaaattcaaagtcgctaaaa 42781397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 4726688 - 4726729
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    ||||||| |||||||||||| ||||||||||||| |||||||    
T  4726688 attcattcaaattgatagagtacattgatataatgcaaattc 4726729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 6886863 - 6886904
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattc 53  Q
    |||||||||||||||||||| |||| |||||||| |||||||    
T  6886863 attcatttaaattgatagagtacatcgatataatgcaaattc 6886904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 6635698 - 6635638
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||| ||||||||| ||| ||||| |||||    
T  6635698 attcattcaaattgatagagtacatcgatacaatataaattcaaattcgttaaaaacaaaa 6635638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 7151246 - 7151186
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||| ||||||| | ||||||| |||||||||||||| ||| ||||| |||||    
T  7151246 attcattaaaatcgatagagtaaattgatacaatacaaattcaaagtcgttaaaaacaaaa 7151186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 7771488 - 7771552
Alignment:
Q  8 atttattcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||||||| ||||||||| || |||| |||| |||||||||  ||| ||||||||| |||||    
T  7771488 atttattcattcaaattgatatagtacatcgatacaatacaaatctaaattcgctaaaaacaaaa 7771552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 18654232 - 18654172
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||  ||||||||| |||| |||| |||| ||||||||| |||||    
T  18654232 attcattcaaattgatagactacattgatacaatataaatccaaattcgctaaaaacaaaa 18654172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 26294060 - 26294000
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||| ||||||| || | |||| |||||||||||||| ||||||||| |||||    
T  26294060 attcattcaaatagatagagtacgtcgatacaatacaaattcaaattcgctaaaaacaaaa 26294000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 29098137 - 29098077
Alignment:
Q  126 atgttgatagcataaaacgactgggtatctatgcctccatatatgactatattcaagtctc 186  Q
    ||||| ||||||||||||| |  ||||  ||||||| || |||||||||||||||||||||    
T  29098137 atgttaatagcataaaacggcaaggtacatatgcctacaaatatgactatattcaagtctc 29098077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 6800 - 6861
Alignment:
Q  12 attcattt-aaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||| |||||||||||| |||| |||| |||||||||||||| ||||||||| |||||    
T  6800 attcatttcaaattgatagagtacatcgatacaatacaaattcaaattcgctaaaaacaaaa 6861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 11239 - 11299
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||||||| | || |||| |||| ||||| ||||||||||||| |||||    
T  11239 attcatttaaattgatagagtatatcgatacaataaaaatttaaaatcgctaaaaacaaaa 11299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 72
Target Start/End: Complemental strand, 74610 - 74554
Alignment:
Q  16 atttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    |||||||||||||||| |||| |||| ||||||||| |||| ||||||||| |||||    
T  74610 atttaaattgatagagtacatcgatacaatacaaatccaaattcgctaaaaacaaaa 74554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 756 - 802
Alignment:
Q  20 aaattgatagagaacattgatataatacaaattcaaaatcgctaaaa 66  Q
    |||||||||||  |||| ||||||||||||||||||| |||||||||    
T  756 aaattgatagaacacatcgatataatacaaattcaaattcgctaaaa 802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 3345 - 3285
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| |||| ||||| ||| ||||||||| |||||    
T  3345 attcattcaaattgatagagtacatcgatacaatataaatttaaattcgctaaaaacaaaa 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 3738 - 3798
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| ||| ||||| |||||    
T  3738 attcattcaaattgatagagtacatcgatacaatacaaatccaaattcggtaaaaacaaaa 3798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Complemental strand, 35525 - 35465
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| |||||||||||| |||| |||| ||||||||| |||| | ||||||| |||||    
T  35525 attcattcaaattgatagagtacatcgatacaatacaaatccaaatttgctaaaaacaaaa 35465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 72
Target Start/End: Original strand, 403919 - 403979
Alignment:
Q  12 attcatttaaattgatagagaacattgatataatacaaattcaaaatcgctaaaatcaaaa 72  Q
    ||||||| ||||| |||||| |||| |||| |||||||||||||| ||||| ||| |||||    
T  403919 attcattcaaattaatagagtacatcgatacaatacaaattcaaattcgctgaaaacaaaa 403979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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