View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4834_high_8 (Length: 328)
Name: NF4834_high_8
Description: NF4834
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4834_high_8 |
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Alignment Details
Target: chr3 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 126 - 317
Target Start/End: Complemental strand, 33891204 - 33891013
Alignment:
| Q |
126 |
aataacatctgtttggattggtttgttccagtttatccactgatataaagcatttgtatggcttaaaaaatagagtagccgaacttttctctctatggct |
225 |
Q |
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| T |
33891204 |
aataacatctgtttagattggtttgttccagtttatccactgatataaagcatttgtatggcttaaaaaatggagtagccgaacttttctctctatggct |
33891105 |
T |
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| Q |
226 |
caaggacacttcctcactcgtgtttatacagtgtttaatgtttctctacctcacaagccacatttcatcaaagagacatcactgcaataaca |
317 |
Q |
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| T |
33891104 |
caaggacacttcctcactcgtggttatacagtgtttaatgtttctctacctcacaagccacatttcatcaaagagacatcactgcaataaca |
33891013 |
T |
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