View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4836_high_8 (Length: 329)
Name: NF4836_high_8
Description: NF4836
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4836_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 1 - 321
Target Start/End: Original strand, 2157710 - 2158030
Alignment:
| Q |
1 |
caaattaattgaatcttccatgtttgattccagtgagatatttgcaaaacagactgaactgtgtatcatgcattttctcctgcatcattttttgaatatt |
100 |
Q |
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| T |
2157710 |
caaattaattgaatcttccatgtttgattccagtgagatatttgcaaaacagactgaactgtgtatcatgcattttctcctgcatcattttttgaatatt |
2157809 |
T |
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| Q |
101 |
ggtttcttctgcaattcttttctatataaacatcaatgcttaaaaatatccatgtatcaattcaactatggaaagcctacttccttgcatttttatgcat |
200 |
Q |
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| T |
2157810 |
ggtttcttctgcaattcttttctatataaacatcaatgcttaaaaatatccatgtatcaattcaactatggaaagcctacttccttgcatttttatgcat |
2157909 |
T |
|
| Q |
201 |
agtatcaaccaaactattgagtgaggttatatttatattttgtctcaataggattctgtgtttggtggtatatattttgatgtttgttttatattctcag |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2157910 |
agtatcaaccaaactattgagtgaggttatatttatattttgtctcaataggattctgtgtttggtggtatatattttgatgtttgttttatattctcag |
2158009 |
T |
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| Q |
301 |
tgaagatgagtaatctctgct |
321 |
Q |
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|||||||||||||||| |||| |
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| T |
2158010 |
tgaagatgagtaatctttgct |
2158030 |
T |
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