View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4837-Insertion-16 (Length: 405)
Name: NF4837-Insertion-16
Description: NF4837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4837-Insertion-16 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 8 - 405
Target Start/End: Complemental strand, 6512860 - 6512462
Alignment:
| Q |
8 |
ctatattcataaatagttttatttaaattcaaattatagccatacatcatatcataggttaaaatatgataatctaggtgaaaggacaaaaacagggttt |
107 |
Q |
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| T |
6512860 |
ctatattcataaatagttttatttaaattcaaattatagccatacatcatatcataggttaaaatatgataatctaggtgaaaggacaaaaacagggttt |
6512761 |
T |
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| Q |
108 |
tgttaaaatttatgatgaaaggttcannnnnnnnnn--gttgatgtgggaaggatgaatgggagataaggagaagaatacctactggaattgaggggttt |
205 |
Q |
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| T |
6512760 |
tgttaaaatttatgatgaaaggttgatttattttttttgttgatgtgagaaggatgaatgggagataaggagaagaatacctactggaattgagaggttt |
6512661 |
T |
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| Q |
206 |
agtacgaacatgaatgagaatgcaattagagttcttctttagaaggtggtccaccgcccatttcaccgcgcactggctattccgaccggtgttgatggca |
305 |
Q |
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| T |
6512660 |
ggtacgaacatgaatgagaatgcaattggagttcttctttagaaggtggtccaccgcccatttcaccgcgcactggctattccgaccggtgttgatggca |
6512561 |
T |
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| Q |
306 |
atgacggtggttttggcggcggtggcagctcctaattcattagtaatcatttgcatgaagaattaaggttagttacttttttagaaaaaataagctcttg |
405 |
Q |
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| T |
6512560 |
atgacggtggttttggcggcggtggcagctcctaattcattagtaatcatttgcatgaagaattaaggttagttacttttttaga-aaaataagctcttg |
6512462 |
T |
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