View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4837_high_3 (Length: 240)
Name: NF4837_high_3
Description: NF4837
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4837_high_3 |
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Alignment Details
Target: chr3 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 35445804 - 35445584
Alignment:
| Q |
1 |
taacatattcatgaatcaaacgaatctacttatacataacccgagttattaaatatgttttttaatctctatagttatctataattttactatcagtccc |
100 |
Q |
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| T |
35445804 |
taacatattcatgaatcaaacgaatctacttatacataacccgagttattaaatatgttttt-aatctctatagttatctataattttactatcagtccc |
35445706 |
T |
|
| Q |
101 |
tccctatacccacttttcagtcccaacaaattatacatgacattgacatgcttttggtctataaagagggactaaaaacatgcaactttgtaacttgtag |
200 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||| |
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| T |
35445705 |
tccctatactcacttttcagtcccaacaaattatacatgacattgacatacttttggtccataaagagggactaaaaacatgcaacattgtaacttgtag |
35445606 |
T |
|
| Q |
201 |
aaactaaaaagtaggtatagag |
222 |
Q |
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|||||||||||||||||||||| |
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| T |
35445605 |
aaactaaaaagtaggtatagag |
35445584 |
T |
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