View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4839-Insertion-8 (Length: 353)
Name: NF4839-Insertion-8
Description: NF4839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4839-Insertion-8 |
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Alignment Details
Target: chr1 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 8 - 335
Target Start/End: Complemental strand, 51406664 - 51406343
Alignment:
| Q |
8 |
atgtttatcataaaatctcaaactctagatagaatacgaatacagttgtcagtagagttgtactaatacgaatacaaaagttggaatacttttggttgta |
107 |
Q |
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| T |
51406664 |
atgtttatcataaaatctcaaactctaaatagaatacgaatacagttgtcagcagagttgtactaatacgaatacaaaagttggaatacttttggttgta |
51406565 |
T |
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| Q |
108 |
gttgctttgtgctttccatttatgctttgcaatggtgttctttgaagttttggtcgttttctgtattgatgagatagagatagaggtatttgttcaaggc |
207 |
Q |
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| T |
51406564 |
gttgctttgtgctttccatttatgctttgcaatggtgttctttgaagttttggtcgttttctgtattgatgagat------agaggtatttgttcaaggc |
51406471 |
T |
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| Q |
208 |
caagctctcattcaaatcacacatgagaaaacgacggtatttatttggctatatcatttaacaggataattttaagattagaaatcataatactaatacc |
307 |
Q |
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| T |
51406470 |
caagctctcattcaaatcacacatcagaaaacgacgggatttatttggctatatcatttaacgggataattttaagattagaaatcataatactaatacc |
51406371 |
T |
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| Q |
308 |
ataatgctcttgagtcttgacagtataa |
335 |
Q |
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||||||||| | |||||||||||||||| |
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| T |
51406370 |
ataatgctccttagtcttgacagtataa |
51406343 |
T |
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