View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4839-Insertion-9 (Length: 373)
Name: NF4839-Insertion-9
Description: NF4839
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4839-Insertion-9 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 7 - 373
Target Start/End: Original strand, 42656750 - 42657111
Alignment:
| Q |
7 |
acaaaccacataaacctatgtaaaaaataacaccatctaatttttaagacaaaataaaggacaattaaaatatggaagatgaatataccttaatgattct |
106 |
Q |
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| T |
42656750 |
acaaaccacataaacctatgtaaaaaataacaccatctaatttttaagacaaaataaagaacaattaaaatatggaagatgaatataccttaatgattct |
42656849 |
T |
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| Q |
107 |
gtggaacttaacgttgtcgtaataacctctacgagatagttcaatgaagttcctagaagttctaggtgcatacttgtagtacaactaaaaacccnnnnnn |
206 |
Q |
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| T |
42656850 |
gtggaacttaacgttgtcgtaataacctctacgagatagttcaatgaagttcctagaagttctaggtgcatgcttgtagtacaactaaaaaccc-aaaaa |
42656948 |
T |
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| Q |
207 |
nnnnnnnnntgttaaaaccctaattccgtctgtatctgggtttaagaacgaacgaattnnnnnnnnnnnnnnnnnnnnnnnttacctcgacggtgaatga |
306 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
42656949 |
aaaaaaaattgttaaaaccctaat----tctgtatctgggtttaagaacgaacgaatttaaaaagtaaaataaaataaaaattacctcgacggtgaatga |
42657044 |
T |
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| Q |
307 |
acccatggaagtttctagagtaacctccggagcaccaccctctgcgcttgcccacatttttctctca |
373 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
42657045 |
acccatggaagtttctagagtaacctccggagcaccaccttctgcgcttgcccacatttttctctca |
42657111 |
T |
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