View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4845-Insertion-1 (Length: 1000)

Name: NF4845-Insertion-1
Description: NF4845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4845-Insertion-1
NF4845-Insertion-1
[»] chr5 (48 HSPs)
chr5 (150-1000)||(32203277-32204125)
chr5 (8-147)||(1138589-1138728)
chr5 (8-147)||(20476461-20476600)
chr5 (9-146)||(12744857-12744994)
chr5 (8-152)||(15855873-15856017)
chr5 (8-147)||(16472985-16473124)
chr5 (8-147)||(35420614-35420753)
chr5 (8-135)||(21261973-21262100)
chr5 (9-147)||(4266013-4266151)
chr5 (9-147)||(13754293-13754431)
chr5 (9-147)||(33629347-33629487)
chr5 (15-147)||(21259732-21259864)
chr5 (8-147)||(37552310-37552449)
chr5 (9-147)||(43539138-43539276)
chr5 (9-146)||(12807942-12808079)
chr5 (9-145)||(19976292-19976429)
chr5 (8-113)||(24397282-24397387)
chr5 (14-147)||(1456025-1456157)
chr5 (62-162)||(21591200-21591300)
chr5 (62-162)||(21595317-21595417)
chr5 (41-145)||(32623219-32623323)
chr5 (8-104)||(37655197-37655292)
chr5 (9-126)||(5144459-5144575)
chr5 (8-118)||(35276323-35276434)
chr5 (9-80)||(12191423-12191494)
chr5 (9-87)||(735307-735385)
chr5 (15-145)||(35806972-35807102)
chr5 (56-148)||(1384330-1384421)
chr5 (96-152)||(2255580-2255636)
chr5 (8-104)||(8364675-8364771)
chr5 (8-78)||(1164866-1164937)
chr5 (96-147)||(24397364-24397415)
chr5 (63-137)||(2529066-2529140)
chr5 (8-90)||(2538426-2538508)
chr5 (15-118)||(18236503-18236608)
chr5 (9-57)||(10132313-10132361)
chr5 (9-69)||(42522900-42522960)
chr5 (48-147)||(780796-780895)
chr5 (96-147)||(1138561-1138612)
chr5 (76-147)||(2268703-2268774)
chr5 (96-147)||(15855845-15855896)
chr5 (96-147)||(35420730-35420781)
chr5 (96-145)||(8364748-8364797)
chr5 (96-145)||(16472959-16473008)
chr5 (96-147)||(4265984-4266035)
chr5 (104-147)||(17583365-17583408)
chr5 (96-147)||(20476433-20476484)
chr5 (97-146)||(25751570-25751619)
[»] chr2 (48 HSPs)
chr2 (150-1000)||(40453522-40454370)
chr2 (150-291)||(40458077-40458218)
chr2 (8-147)||(3116906-3117045)
chr2 (9-147)||(45408656-45408794)
chr2 (8-147)||(16705763-16705902)
chr2 (8-147)||(24101834-24101973)
chr2 (8-147)||(2818696-2818835)
chr2 (8-147)||(9933572-9933710)
chr2 (8-145)||(12850546-12850683)
chr2 (9-147)||(1923982-1924121)
chr2 (8-147)||(9281349-9281488)
chr2 (9-147)||(34490487-34490625)
chr2 (8-147)||(7737094-7737234)
chr2 (7-147)||(29229363-29229506)
chr2 (7-147)||(29342663-29342806)
chr2 (8-147)||(27920602-27920741)
chr2 (9-147)||(22269753-22269891)
chr2 (8-149)||(34455915-34456056)
chr2 (20-147)||(42713779-42713907)
chr2 (20-147)||(6605777-6605903)
chr2 (9-147)||(43475975-43476115)
chr2 (8-119)||(23835906-23836018)
chr2 (372-802)||(40092161-40092591)
chr2 (8-147)||(20892914-20893053)
chr2 (9-126)||(9850781-9850897)
chr2 (7-142)||(7116399-7116534)
chr2 (9-135)||(39242997-39243123)
chr2 (83-147)||(10552986-10553050)
chr2 (96-160)||(22269711-22269775)
chr2 (96-147)||(16705735-16705786)
chr2 (28-118)||(40362533-40362622)
chr2 (96-144)||(2818671-2818719)
chr2 (96-147)||(1924099-1924150)
chr2 (96-147)||(3116878-3116929)
chr2 (96-147)||(9281465-9281516)
chr2 (96-147)||(20892886-20892937)
chr2 (96-147)||(23835878-23835929)
chr2 (96-147)||(24101950-24102001)
chr2 (96-147)||(34455887-34455938)
chr2 (96-147)||(34490458-34490509)
chr2 (92-147)||(43858548-43858603)
chr2 (96-147)||(7737066-7737117)
chr2 (96-147)||(9933687-9933738)
chr2 (96-147)||(45408627-45408678)
chr2 (9-74)||(17434755-17434821)
chr2 (8-89)||(22346434-22346516)
chr2 (110-147)||(6605740-6605777)
chr2 (96-149)||(43475944-43475997)
[»] chr8 (35 HSPs)
chr8 (276-938)||(39745115-39745776)
chr8 (9-150)||(40891044-40891185)
chr8 (8-147)||(38520048-38520187)
chr8 (8-147)||(38629504-38629643)
chr8 (8-145)||(29780963-29781100)
chr8 (8-147)||(15882230-15882370)
chr8 (8-147)||(17426630-17426771)
chr8 (8-147)||(12234496-12234636)
chr8 (15-136)||(4261989-4262110)
chr8 (8-148)||(37114268-37114408)
chr8 (9-145)||(24741827-24741963)
chr8 (8-147)||(8210353-8210492)
chr8 (7-145)||(35467200-35467337)
chr8 (8-147)||(23940806-23940946)
chr8 (8-147)||(24211280-24211419)
chr8 (8-147)||(33100647-33100786)
chr8 (372-802)||(12462518-12462948)
chr8 (7-145)||(38405167-38405305)
chr8 (23-145)||(14834676-14834795)
chr8 (9-145)||(33390679-33390813)
chr8 (19-126)||(11828619-11828733)
chr8 (15-147)||(40393760-40393891)
chr8 (8-89)||(10778687-10778768)
chr8 (62-147)||(38515588-38515673)
chr8 (95-147)||(8210325-8210377)
chr8 (96-147)||(23940923-23940974)
chr8 (8-74)||(4035771-4035837)
chr8 (96-147)||(15882202-15882253)
chr8 (96-147)||(17426748-17426799)
chr8 (109-152)||(24211409-24211452)
chr8 (96-147)||(37114240-37114291)
chr8 (96-147)||(12234468-12234519)
chr8 (96-147)||(29781077-29781128)
chr8 (28-78)||(1568638-1568688)
chr8 (115-152)||(26261497-26261534)
[»] chr1 (73 HSPs)
chr1 (276-938)||(27513926-27514587)
chr1 (276-938)||(9717361-9718022)
chr1 (9-150)||(14387014-14387155)
chr1 (7-147)||(19954913-19955053)
chr1 (8-152)||(5189499-5189643)
chr1 (14-147)||(27240926-27241059)
chr1 (8-147)||(9978053-9978193)
chr1 (8-147)||(2854534-2854673)
chr1 (8-147)||(3607731-3607870)
chr1 (8-147)||(23698504-23698643)
chr1 (8-147)||(42561297-42561436)
chr1 (8-147)||(48954216-48954355)
chr1 (8-147)||(15324656-15324796)
chr1 (8-147)||(1387808-1387947)
chr1 (8-147)||(19796983-19797122)
chr1 (9-147)||(47940572-47940711)
chr1 (8-147)||(50627161-50627300)
chr1 (10-147)||(27670175-27670313)
chr1 (8-147)||(40647146-40647287)
chr1 (8-147)||(51276697-51276836)
chr1 (8-147)||(27926253-27926393)
chr1 (8-147)||(51789599-51789736)
chr1 (9-145)||(27928302-27928438)
chr1 (8-147)||(26208454-26208594)
chr1 (8-147)||(50162540-50162680)
chr1 (9-120)||(6079415-6079526)
chr1 (18-126)||(48645037-48645145)
chr1 (8-145)||(957618-957756)
chr1 (9-126)||(4299415-4299535)
chr1 (8-147)||(2125072-2125211)
chr1 (372-535)||(8189570-8189733)
chr1 (7-89)||(9895282-9895364)
chr1 (9-147)||(21930411-21930547)
chr1 (9-104)||(29598354-29598449)
chr1 (23-145)||(50856325-50856450)
chr1 (17-86)||(28243997-28244066)
chr1 (55-147)||(36880588-36880680)
chr1 (15-145)||(22338988-22339118)
chr1 (40-145)||(49284298-49284403)
chr1 (593-757)||(8189791-8189955)
chr1 (9-118)||(28431733-28431844)
chr1 (14-104)||(2302439-2302529)
chr1 (7-145)||(16518302-16518443)
chr1 (11-89)||(39015253-39015331)
chr1 (96-147)||(5189471-5189522)
chr1 (96-147)||(9978170-9978221)
chr1 (19-90)||(18651309-18651380)
chr1 (96-147)||(19797099-19797150)
chr1 (96-147)||(49285093-49285144)
chr1 (94-147)||(362473-362526)
chr1 (96-147)||(2854650-2854701)
chr1 (96-147)||(3607847-3607898)
chr1 (96-147)||(4299513-4299564)
chr1 (96-147)||(14387133-14387184)
chr1 (96-147)||(15324628-15324679)
chr1 (96-147)||(23698620-23698671)
chr1 (96-147)||(27241042-27241093)
chr1 (96-147)||(27926370-27926421)
chr1 (28-135)||(35547714-35547821)
chr1 (9-52)||(36880320-36880363)
chr1 (96-147)||(42561413-42561464)
chr1 (96-147)||(47940689-47940740)
chr1 (96-147)||(48954332-48954383)
chr1 (96-147)||(50162657-50162708)
chr1 (96-147)||(50627133-50627184)
chr1 (97-147)||(25297966-25298016)
chr1 (282-335)||(2700975-2701028)
chr1 (19-60)||(16755266-16755307)
chr1 (96-147)||(19955029-19955080)
chr1 (96-147)||(51276813-51276864)
chr1 (96-147)||(51789713-51789764)
chr1 (8-46)||(49285078-49285116)
chr1 (96-145)||(22339102-22339151)
[»] chr4 (52 HSPs)
chr4 (276-938)||(56389683-56390344)
chr4 (7-147)||(13204406-13204546)
chr4 (8-147)||(1298942-1299081)
chr4 (8-147)||(20435142-20435281)
chr4 (8-147)||(530671-530810)
chr4 (8-147)||(21048707-21048845)
chr4 (8-147)||(18417687-18417826)
chr4 (9-147)||(42274494-42274633)
chr4 (8-147)||(27434640-27434779)
chr4 (7-147)||(24915796-24915940)
chr4 (15-147)||(4552822-4552954)
chr4 (8-147)||(24969543-24969685)
chr4 (15-147)||(32318722-32318854)
chr4 (15-147)||(55107561-55107693)
chr4 (9-147)||(4688249-4688388)
chr4 (8-147)||(28809848-28809988)
chr4 (9-147)||(35360707-35360844)
chr4 (14-147)||(23928570-23928702)
chr4 (9-147)||(3422431-3422569)
chr4 (41-152)||(55049397-55049508)
chr4 (9-118)||(4895003-4895113)
chr4 (8-86)||(52824269-52824347)
chr4 (8-137)||(2272397-2272525)
chr4 (8-144)||(24294497-24294636)
chr4 (9-145)||(16995559-16995694)
chr4 (8-122)||(56552091-56552205)
chr4 (62-145)||(9355557-9355640)
chr4 (32-149)||(36030939-36031048)
chr4 (96-152)||(37525061-37525117)
chr4 (96-147)||(530787-530838)
chr4 (96-147)||(18417659-18417710)
chr4 (96-147)||(20435258-20435309)
chr4 (76-147)||(43486202-43486273)
chr4 (8-82)||(52587382-52587454)
chr4 (96-147)||(52824241-52824292)
chr4 (678-763)||(3275773-3275858)
chr4 (96-145)||(3422547-3422596)
chr4 (678-763)||(28600894-28600979)
chr4 (96-145)||(47465102-47465151)
chr4 (96-147)||(1298914-1298965)
chr4 (96-147)||(4552787-4552838)
chr4 (10-145)||(19600944-19601079)
chr4 (96-147)||(24969662-24969713)
chr4 (96-147)||(42274611-42274662)
chr4 (9-98)||(19591252-19591341)
chr4 (23-118)||(1051203-1051296)
chr4 (16-104)||(23481966-23482054)
chr4 (96-147)||(23928685-23928736)
chr4 (96-147)||(55107526-55107577)
chr4 (7-36)||(42020203-42020232)
chr4 (62-127)||(42906862-42906927)
chr4 (23-120)||(47465014-47465110)
[»] chr3 (82 HSPs)
chr3 (8-149)||(12838107-12838248)
chr3 (8-147)||(21969159-21969298)
chr3 (8-147)||(21991595-21991734)
chr3 (7-147)||(3970493-3970633)
chr3 (8-147)||(45487829-45487968)
chr3 (7-147)||(13078165-13078305)
chr3 (8-147)||(22101194-22101334)
chr3 (8-147)||(26906484-26906623)
chr3 (8-147)||(36278758-36278897)
chr3 (8-147)||(22176138-22176278)
chr3 (8-147)||(25446279-25446418)
chr3 (9-147)||(4072275-4072414)
chr3 (8-147)||(25488343-25488482)
chr3 (8-147)||(25561041-25561180)
chr3 (8-147)||(36657435-36657574)
chr3 (15-147)||(10254605-10254738)
chr3 (8-147)||(8831770-8831910)
chr3 (8-147)||(10441260-10441399)
chr3 (8-147)||(32237396-32237535)
chr3 (8-147)||(36822762-36822901)
chr3 (8-147)||(45712905-45713044)
chr3 (9-147)||(12789637-12789775)
chr3 (8-147)||(50099462-50099603)
chr3 (15-147)||(10117552-10117680)
chr3 (8-117)||(43150510-43150619)
chr3 (15-147)||(10017151-10017278)
chr3 (8-147)||(43639083-43639223)
chr3 (9-147)||(26977721-26977859)
chr3 (15-147)||(55340295-55340428)
chr3 (8-147)||(39850346-39850486)
chr3 (9-147)||(26976844-26976982)
chr3 (9-147)||(44611384-44611521)
chr3 (9-149)||(44920647-44920786)
chr3 (8-150)||(404074-404216)
chr3 (40-147)||(35368795-35368902)
chr3 (9-144)||(46664207-46664342)
chr3 (15-145)||(1476555-1476685)
chr3 (23-147)||(13723990-13724114)
chr3 (8-84)||(36329245-36329321)
chr3 (372-535)||(8018414-8018577)
chr3 (9-145)||(42105387-42105523)
chr3 (8-145)||(5529921-5530059)
chr3 (15-119)||(37536907-37537011)
chr3 (15-145)||(297541-297669)
chr3 (8-104)||(157013-157110)
chr3 (9-78)||(38125250-38125319)
chr3 (17-146)||(37506130-37506258)
chr3 (96-150)||(43639200-43639254)
chr3 (23-145)||(46222032-46222153)
chr3 (45-147)||(46679328-46679430)
chr3 (48-145)||(49984001-49984098)
chr3 (96-147)||(21969275-21969326)
chr3 (96-147)||(21991711-21991762)
chr3 (96-147)||(38125297-38125348)
chr3 (96-147)||(39850463-39850514)
chr3 (96-147)||(45487801-45487852)
chr3 (96-145)||(26976960-26977009)
chr3 (96-147)||(404046-404097)
chr3 (96-147)||(4072392-4072443)
chr3 (96-147)||(5529893-5529944)
chr3 (96-147)||(10017116-10017167)
chr3 (96-147)||(10254570-10254621)
chr3 (96-147)||(12789608-12789659)
chr3 (96-147)||(25488459-25488510)
chr3 (96-147)||(25561013-25561064)
chr3 (96-147)||(26906456-26906507)
chr3 (96-147)||(32237512-32237563)
chr3 (96-147)||(35368551-35368602)
chr3 (96-147)||(36278874-36278925)
chr3 (96-147)||(36657551-36657602)
chr3 (96-147)||(36822878-36822929)
chr3 (96-147)||(43150482-43150533)
chr3 (96-146)||(45713021-45713071)
chr3 (96-145)||(1476669-1476718)
chr3 (96-145)||(8831744-8831793)
chr3 (96-149)||(12838077-12838130)
chr3 (96-152)||(13078281-13078337)
chr3 (96-147)||(3970609-3970660)
chr3 (96-147)||(10117517-10117568)
chr3 (96-147)||(10441376-10441427)
chr3 (9-72)||(24435620-24435683)
chr3 (96-142)||(44611499-44611545)
[»] chr6 (33 HSPs)
chr6 (8-147)||(885415-885554)
chr6 (9-147)||(15546663-15546801)
chr6 (8-147)||(21379943-21380082)
chr6 (8-147)||(8091092-8091231)
chr6 (8-147)||(11687145-11687284)
chr6 (9-147)||(13172576-13172713)
chr6 (8-140)||(3369015-3369147)
chr6 (8-147)||(14393591-14393733)
chr6 (17-147)||(7808648-7808778)
chr6 (7-147)||(13439724-13439865)
chr6 (8-145)||(29609031-29609168)
chr6 (9-145)||(20501737-20501872)
chr6 (8-147)||(4890482-4890622)
chr6 (8-147)||(18998119-18998258)
chr6 (8-144)||(4238882-4239020)
chr6 (9-147)||(17279555-17279693)
chr6 (7-118)||(31764356-31764467)
chr6 (72-126)||(6433751-6433805)
chr6 (96-147)||(21380059-21380110)
chr6 (91-147)||(6433692-6433748)
chr6 (96-152)||(11687261-11687317)
chr6 (20-112)||(30905018-30905110)
chr6 (96-147)||(885387-885438)
chr6 (96-147)||(4890599-4890650)
chr6 (96-147)||(7808611-7808662)
chr6 (9-79)||(4179097-4179166)
chr6 (48-147)||(17367066-17367158)
chr6 (7-122)||(7187593-7187706)
chr6 (96-152)||(20501703-20501759)
chr6 (96-147)||(3368987-3369038)
chr6 (96-147)||(8091064-8091115)
chr6 (11-80)||(7441753-7441820)
chr6 (96-145)||(29609005-29609054)
[»] chr7 (55 HSPs)
chr7 (8-153)||(24836050-24836195)
chr7 (7-147)||(3953044-3953184)
chr7 (7-147)||(35339280-35339420)
chr7 (8-145)||(30259070-30259207)
chr7 (8-147)||(34052309-34052448)
chr7 (8-147)||(20184240-20184380)
chr7 (8-152)||(31231611-31231757)
chr7 (8-147)||(38883251-38883390)
chr7 (14-147)||(45997510-45997643)
chr7 (19-146)||(30594734-30594861)
chr7 (8-147)||(10936472-10936611)
chr7 (7-152)||(9285711-9285856)
chr7 (7-152)||(9289778-9289923)
chr7 (9-147)||(40358146-40358287)
chr7 (8-147)||(25742437-25742572)
chr7 (9-147)||(37093799-37093937)
chr7 (8-147)||(39617843-39617983)
chr7 (9-147)||(48103399-48103534)
chr7 (372-802)||(4245721-4246151)
chr7 (7-147)||(24123757-24123899)
chr7 (14-147)||(12142228-12142362)
chr7 (7-145)||(29277867-29278004)
chr7 (19-136)||(31521538-31521655)
chr7 (48-147)||(39143714-39143813)
chr7 (9-118)||(33749674-33749784)
chr7 (8-103)||(7955011-7955106)
chr7 (8-74)||(35665691-35665757)
chr7 (8-147)||(47237435-47237569)
chr7 (8-89)||(38528470-38528553)
chr7 (96-147)||(35665734-35665785)
chr7 (9-90)||(40596745-40596825)
chr7 (96-147)||(10936588-10936639)
chr7 (96-147)||(31231734-31231785)
chr7 (96-147)||(38528530-38528581)
chr7 (97-147)||(33721829-33721879)
chr7 (8-45)||(38528420-38528457)
chr7 (98-147)||(39143826-39143875)
chr7 (96-152)||(34052276-34052332)
chr7 (96-147)||(20184357-20184408)
chr7 (96-147)||(35665635-35665686)
chr7 (96-147)||(38883223-38883274)
chr7 (15-88)||(1072271-1072342)
chr7 (40-145)||(10398381-10398486)
chr7 (19-60)||(28723567-28723608)
chr7 (96-147)||(24836022-24836073)
chr7 (96-152)||(29277835-29277891)
chr7 (9-118)||(38989102-38989213)
chr7 (109-152)||(17101705-17101748)
chr7 (96-147)||(30259184-30259235)
chr7 (96-147)||(30594695-30594746)
chr7 (96-147)||(47237546-47237597)
chr7 (96-147)||(48103370-48103421)
chr7 (109-147)||(17101656-17101694)
chr7 (15-52)||(4453193-4453230)
chr7 (55-104)||(44148724-44148773)
[»] scaffold0122 (2 HSPs)
scaffold0122 (8-147)||(45864-46003)
scaffold0122 (96-147)||(45836-45887)
[»] scaffold0107 (2 HSPs)
scaffold0107 (8-147)||(51093-51232)
scaffold0107 (96-147)||(51065-51116)
[»] scaffold0188 (2 HSPs)
scaffold0188 (9-147)||(7117-7255)
scaffold0188 (96-147)||(7088-7139)
[»] scaffold0653 (1 HSPs)
scaffold0653 (7-152)||(3390-3535)
[»] scaffold0086 (1 HSPs)
scaffold0086 (8-147)||(48156-48295)
[»] scaffold0163 (2 HSPs)
scaffold0163 (8-147)||(1941-2081)
scaffold0163 (96-147)||(2058-2109)
[»] scaffold0118 (1 HSPs)
scaffold0118 (15-147)||(14479-14611)
[»] scaffold0137 (1 HSPs)
scaffold0137 (14-147)||(10152-10284)
[»] scaffold0595 (2 HSPs)
scaffold0595 (8-147)||(5731-5876)
scaffold0595 (96-147)||(5703-5754)
[»] scaffold0018 (1 HSPs)
scaffold0018 (31-139)||(138287-138395)
[»] scaffold0006 (1 HSPs)
scaffold0006 (8-74)||(72346-72412)
[»] scaffold0069 (1 HSPs)
scaffold0069 (96-147)||(26407-26458)
[»] scaffold0013 (1 HSPs)
scaffold0013 (15-104)||(94207-94298)


Alignment Details
Target: chr5 (Bit Score: 796; Significance: 0; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 796; E-Value: 0
Query Start/End: Original strand, 150 - 1000
Target Start/End: Complemental strand, 32204125 - 32203277
Alignment:
Q  150 aaacatatatacaacttctgttcctaatgtctctccttaataacaggaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 249  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32204125 aaacatatatacagcttctgttcctaatgtctctccttaataacagaaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 32204026  T
Q  250 aatatctcttcctagaataacaacagttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgtt 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32204025 aatatctcttcctagaataacaacagttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgtt 32203926  T
Q  350 aaacaccttgctcgatactcctttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttg 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32203925 aaacaccttgctcgatactcctttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttg 32203826  T
Q  450 atgaaatgtctatcaatttcaacatgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatag 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32203825 atgaaatgtctatcaatttcaacatgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatag 32203726  T
Q  550 cttcttttggctcaaaacccaagtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttga 649  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32203725 cttcttttggctcaaaacccaagtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctacttcagcacttga 32203626  T
Q  650 tctagctactactggctgcttcttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacct 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32203625 tctagctactactggctgcttcttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacct 32203526  T
Q  750 gcccaatcggcatctgtgtatccttctaccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctct 849  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32203525 gcccaatcggcatctgtgtatccttctaccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctct 32203426  T
Q  850 ctacaacatccatatgaggcttacgcggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgagagagataaacca 949  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  32203425 ctacaacatccatatgaggcttacgcggatcat-gcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgagagagataaatca 32203327  T
Q  950 gc-tcccaaccaagctttgggtacctccctttatctgtggatggttgagttt 1000  Q
    || |||||||||| |||| ||||||||||||||||||| |||| ||||||||    
T  32203326 gcttcccaaccaaacttt-ggtacctccctttatctgt-gatgtttgagttt 32203277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 1138589 - 1138728
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| ||    
T  1138589 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaa 1138688  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||  ||||||||||||||||||||    
T  1138689 ccatacgaaaagcagctatggaattgtacctaagttttct 1138728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 20476461 - 20476600
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||  ||||||| ||| || |||||||||||||||||||||||||||| |||||||||||||| ||    
T  20476461 cttttcgtatggttcttaactaaaaatacatatttttgtgatataacaaattttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 20476560  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  20476561 ccatacgaaaagcacctaaggaattgtacctaagttttct 20476600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 12744857 - 12744994
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||  |||||||||| |||||     
T  12744857 tttttgtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagtcaaaaat 12744956  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttc 146  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  12744957 catacgaaaaacacctaaggaattgtacctaagttttc 12744994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 15855873 - 15856017
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  15855873 cttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 15855972  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
     ||||||||||||| |||| |||||||||||||||||||| ||||    
T  15855973 ccatacgaaaagcatctaaggaattgtacctaagttttctccaaa 15856017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 16472985 - 16473124
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  16472985 cttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 16473084  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  16473085 ccatacgaaaagcatctaaggaattgtacctaagttttct 16473124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 35420753 - 35420614
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  35420753 cttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 35420654  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  35420653 ccatacgaaaagcatctaaggaattgtacctaagttttct 35420614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 21261973 - 21262100
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||| |||||||||||||| ||    
T  21261973 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattgtggatttgaggaaatcatgatgaatttagttaagaa 21262072  T
Q  108 acatacgaaaagcacctaatgaattgta 135  Q
     ||||| ||||||  |||| ||||||||    
T  21262073 ccatacaaaaagctgctaaggaattgta 21262100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 4266013 - 4266151
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||| |||||||   ||||||||||||| ||     
T  4266013 ttttcgtatggttcttaactaaaaatacatattttttggatgtaacaaactttaagaaaattatggatttgaagaaatcacggtgaatttagttaagaac 4266112  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| ||||||| |||||||||| |||||||||    
T  4266113 catacgaaaaacacctaaggaattgtaccgaagttttct 4266151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 13754431 - 13754293
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||| |||||||||||| ||  ||||||||||||| ||     
T  13754431 ttttcgtatggttcttaactaaaaatacatatttttttgatatagcaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaagaat 13754332  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| ||| ||| ||||||||||||||||||||    
T  13754331 catacgaaaaacacataaggaattgtacctaagttttct 13754293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 33629487 - 33629347
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatat--tttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||| ||||| |||||||||||||||| ||||  ||||||||||||| |||||| |||||||||||||||||||| |||||||| ||||||||||||| |    
T  33629487 ttttcgtatgattcttaactaaaaatatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatagtgaatttagttaaga 33629388  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||| |||||||| ||| ||||||||||||||||||||    
T  33629387 accataccaaaagcacataaggaattgtacctaagttttct 33629347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 21259864 - 21259732
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||  ||||||||||||||  ||||||||  ||| || ||||||    
T  21259864 tatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgattttgaggaaatcatggtgaatttaactaagaaccatacg 21259765  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||| ||| ||||||||| ||||||||||    
T  21259764 aaaagcacataaagaattgtacgtaagttttct 21259732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 37552449 - 37552310
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||||||||||||||| |||||||||||||||||||| | ||||| |||||| |||||||||||| |||||||||| ||||  ||||||||||||| ||    
T  37552449 ctttttgtatggttcttgactaaaaatacatatttttttgttataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaagaa 37552350  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     | ||| ||||||||  |||||||||||||||||||||||    
T  37552349 ccgtacaaaaagcacggaatgaattgtacctaagttttct 37552310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 43539138 - 43539276
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||||||| || ||||||  ||||||||||||||  |     
T  43539138 ttttcgtatggttctgaactataaatacatattttttggatataacaaactttgagaaaattatggatttaagaaaatcacgatgaatttagttaaggac 43539237  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| ||||||| ||||||||||||| ||||||    
T  43539238 catacgaaaaacacctaaggaattgtacctaaattttct 43539276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 12807942 - 12808079
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||| |||||| || |||||||||||||| ||||||||||  |||||||||| || ||     
T  12807942 ttttcgtatggtttttaactaaaaatacatattttttagatataacaaactttgaaaaaattatggatttaaggaaatcatggtgaatttagtcaagaat 12808041  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttc 146  Q
    |||||||||| ||| ||| |||||||||||||||||||    
T  12808042 catacgaaaaacacttaaggaattgtacctaagttttc 12808079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 19976292 - 19976429
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| ||||||||||||||||||||||| |||||| |||||||| |||||||| ||||||||||||||||||||||||||||  | |||||| | || ||    
T  19976292 ttttcgtatggttcttaactaaaaatacgtatttttttggatatgataaactttgagaaaattatggatttgaggaaatcatggtaaatttaatcaataa 19976391  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
      ||||||||||||||||| ||||||||||||| ||||    
T  19976392 ctatacgaaaagcacctaaggaattgtacctaaatttt 19976429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 24397387 - 24397282
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| |    
T  24397387 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcat-gtgaatttagttaaga 24397289  T
Q  107 aacatac 113  Q
    | |||||    
T  24397288 accatac 24397282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 1456157 - 1456025
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||| | | ||||||||||||  || ||||     
T  1456157 gtatggttcttgactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaattacagtgaatttagttatgaaccatat 1456058  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||  ||| |||||||||| |||||||||    
T  1456057 aaaaagcaggtaaggaattgtacc-aagttttct 1456025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 21591300 - 21591200
Alignment:
Q  62 gagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaacatatatac 161  Q
    ||||||||||||||||||||||||||||  ||||||||||| | || |||||||||||||| ||| |||||||||||||||||||| |||| || |||||    
T  21591300 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctccaaaaatttatac 21591201  T
Q  162 a 162  Q
    |    
T  21591200 a 21591200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 21595417 - 21595317
Alignment:
Q  62 gagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaacatatatac 161  Q
    ||||||||||||||||||||||||||||  ||||||||||| | || |||||||||||||| ||| |||||||||||||||||||| |||| || |||||    
T  21595417 gagaaaattatggatttgaggaaatcatggtgaatttagttcacaaccatacgaaaagcacttaaggaattgtacctaagttttctccaaaaatttatac 21595318  T
Q  162 a 162  Q
    |    
T  21595317 a 21595317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 32623323 - 32623219
Alignment:
Q  41 tttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaa 140  Q
    ||||| ||||||| |||||| |||||||||||||||||   ||||||||| ||||||||||||| || |||||||||| ||||||| |||||||||||||    
T  32623323 tttttagatataacaaactttgagaaaattatggatttacagaaatcatagtgaatttagttaagaaccatacgaaaaacacctaaggaattgtacctaa 32623224  T
Q  141 gtttt 145  Q
    |||||    
T  32623223 gtttt 32623219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 37655292 - 37655197
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||||||||||||||||||||||||||||||||||||| | ||||| |||||| |||||||||||| |||||||||| ||||  |||||||||||||    
T  37655292 ctttttgtatggttcttaactaaaaatacatatttttt-gttataacaaactttgagaaaattatgaatttgaggaagtcatggtgaatttagttaa 37655197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 9 - 126
Target Start/End: Original strand, 5144459 - 5144575
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||||||| | || ||||||||||||||| ||||| |||||||||||| ||| |||||||||||| |||| | |||||||| |||||||||||||||||     
T  5144459 tttttgtacgttttttaactaaaaatacacatttt-tggatataataaccttagagaaaattatgaatttaaagaaatcatgatgaatttagttaaaaat 5144557  T
Q  109 catacgaaaagcacctaa 126  Q
    |||| ||||| |||||||    
T  5144558 cataggaaaaacacctaa 5144575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 8 - 118
Target Start/End: Complemental strand, 35276434 - 35276323
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttg-gatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||||||| ||||||| ||||||||||| |||||||  ||||||||||||||  ||||||||||||||||||  |||||||  | |||||||||| ||    
T  35276434 ctttttgtatagttcttacctaaaaatacacatttttttagatataataaactttaagaaaattatggatttgataaaatcatggtaaatttagttataa 35276335  T
Q  107 aacatacgaaaa 118  Q
    | ||||| ||||    
T  35276334 accatacaaaaa 35276323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 12191423 - 12191494
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttga 80  Q
    |||||||||||||||||| ||||| |||||||||||||||||||| ||||||  |||||| ||| |||||||    
T  12191423 tttttgtatggttcttaaataaaattacatattttttggatataacaaactttaagaaaactatagatttga 12191494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 87
Target Start/End: Original strand, 735307 - 735385
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatc 87  Q
    ||||| |||| ||||||| ||||||||||||||| ||| |||||| |||||| |||||||||||| |||||| ||||||    
T  735307 tttttttatgattcttaattaaaaatacatatttcttgaatataacaaactttgagaaaattatgaatttgatgaaatc 735385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 15 - 145
Target Start/End: Original strand, 35806972 - 35807102
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||  | |||||||  |||||||| |||||||  ||||||||| | | || |||||     
T  35806972 tatggttcttaactaaaaatacatcttttttgaatataacaaactttaaaaaaattaaagatttgagaaaatcatggtgaatttaggttagaaccataca 35807071  T
Q  115 aaaagcacctaatgaattgtacctaagtttt 145  Q
    |||| || ||||  |||| ||||||| ||||    
T  35807072 aaaatcatctaagaaattttacctaaatttt 35807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 148
Target Start/End: Complemental strand, 1384421 - 1384330
Alignment:
Q  56 aacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttctt 148  Q
    ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||  ||| || || |||||||  |||| ||||||| |||||||    
T  1384421 aactttgagaaaattatagatttgaggaaatcataataaatttagttaaaaactatatgataa-cacctaagaaattttacctaaattttctt 1384330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 2255580 - 2255636
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || || ||||||||||||||| |||||||||||||||||||||||||    
T  2255580 tttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttcttcaaa 2255636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 8364771 - 8364675
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||||||||||||||||||||||||||| |  |||||| || |||| |||||| |||| ||||||  |||| || |||||||  |||||||||||||    
T  8364771 ctttttgtatggttcttaactaaaaatataatttttttagacataacaaactttgagagaattataaatttaagaaaatcatggtgaatttagttaa 8364675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 78
Target Start/End: Complemental strand, 1164937 - 1164866
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggattt 78  Q
    ||||| ||||||||||||| |||||||| ||||||||| |||||||||||||||  | ||||||||||||||    
T  1164937 cttttcgtatggttcttaattaaaaataaatatttttttggatataataaacttttaaaaaattatggattt 1164866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 24397364 - 24397415
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  24397364 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24397415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 2529066 - 2529140
Alignment:
Q  63 agaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacc 137  Q
    |||||||||||||||| |||||||||   ||||||||||||| || || |||||||||||||||  |||||||||    
T  2529066 agaaaattatggatttaaggaaatcacggtgaatttagttaagaaccacacgaaaagcacctaagaaattgtacc 2529140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 2538426 - 2538508
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcata 90  Q
    |||||||||| ||||| |||| |||||||| ||||| ||| ||||| |||||  |||||||||||||||||||  ||||||||    
T  2538426 ctttttgtatcgttctcaacttaaaatacacattttctggttataacaaactctgagaaaattatggatttgaaaaaatcata 2538508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 118
Target Start/End: Original strand, 18236503 - 18236608
Alignment:
Q  15 tatggttcttaactaaaaataca--tattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacata 112  Q
    |||| |||||| |||||||||||  | |||||||||||||| |||||| || ||||||||| |||| || ||||||  | |||||||||||| || ||||    
T  18236503 tatgattcttagctaaaaatacaatttttttttggatataacaaactttgaaaaaattatgtatttaagaaaatcacgacgaatttagttaagaaccata 18236602  T
Q  113 cgaaaa 118  Q
    ||||||    
T  18236603 cgaaaa 18236608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 10132313 - 10132361
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaa 57  Q
    |||||||||||||||||| |||||||| || ||||||||||||||||||    
T  10132313 tttttgtatggttcttaattaaaaatatatcttttttggatataataaa 10132361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 69
Target Start/End: Complemental strand, 42522960 - 42522900
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaat 69  Q
    ||||||| |||||||||||||||||||||| || ||| ||||||| |||||| ||||||||    
T  42522960 tttttgtttggttcttaactaaaaatacatcttatttagatataacaaactttgagaaaat 42522900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 780895 - 780796
Alignment:
Q  48 atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| ||||||  |||||||||||||||| ||||||||||  |||||||| | || |  ||||||||||| | |||| ||||| ||||||| ||||||    
T  780895 atataacaaactttaagaaaattatggatttaaggaaatcatggtgaatttaatcaagagtcatacgaaaagaatctaaggaattctacctaacttttct 780796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 1138612 - 1138561
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||| || ||||||||||||||||||||    
T  1138612 tttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttct 1138561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 76 - 147
Target Start/End: Original strand, 2268703 - 2268774
Alignment:
Q  76 tttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| | ||||||||||||| || ||||| ||||||| ||||  |||| ||||||||||||||    
T  2268703 tttgaggaaatcacagtgaatttagttaagaaccatacaaaaagcatctaagaaattatacctaagttttct 2268774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 15855896 - 15855845
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  15855896 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 15855845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 35420730 - 35420781
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  35420730 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 35420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 8364748 - 8364797
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||    
T  8364748 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagtttt 8364797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 16473008 - 16472959
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||    
T  16473008 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagtttt 16472959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 4266035 - 4265984
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| |||||||  |||||||||||||||||||    
T  4266035 tttagttaagaaccatacgaaaaacacctaagaaattgtacctaagttttct 4265984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 147
Target Start/End: Original strand, 17583365 - 17583408
Alignment:
Q  104 aaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||| ||||||||||||||||||  |||||||||||||||||||    
T  17583365 aaaaccatacgaaaagcacctaagaaattgtacctaagttttct 17583408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 20476484 - 20476433
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||  ||||||||||||||||||||    
T  20476484 tttagttaagaaccatacgaaaagcatctagagaattgtacctaagttttct 20476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 25751570 - 25751619
Alignment:
Q  97 ttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttc 146  Q
    |||||||| || || |||||||||||||||  ||||||||||||||||||    
T  25751570 ttagttaagaaccacacgaaaagcacctaaaaaattgtacctaagttttc 25751619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 780; Significance: 0; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 780; E-Value: 0
Query Start/End: Original strand, 150 - 1000
Target Start/End: Original strand, 40453522 - 40454370
Alignment:
Q  150 aaacatatatacaacttctgttcctaatgtctctccttaataacaggaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 249  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40453522 aaacatatatacagcttctgttcctaatgtctctccttaataacatgaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 40453621  T
Q  250 aatatctcttcctagaataacaacagttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgtt 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40453622 aatatctcttcctagaataacaacagttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgtt 40453721  T
Q  350 aaacaccttgctcgatactcctttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttg 449  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40453722 aaacaccttgcttgatactcctttagtgagcatatcagttaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttg 40453821  T
Q  450 atgaaatgtctatcaatttcaacatgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatag 549  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40453822 atgaaatgtctatcaatttcaacatgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatag 40453921  T
Q  550 cttcttttggctcaaaacccaagtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttga 649  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  40453922 cttcttttggctcaaaacccaagtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactcttcttcagcacttga 40454021  T
Q  650 tctagctactactggctgcttcttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacct 749  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40454022 tctagctactactggctgcttcttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacct 40454121  T
Q  750 gcccaatcggcatctgtgtatccttctaccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctct 849  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40454122 gcccaatcggcatctgtgtatccttctaccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctct 40454221  T
Q  850 ctacaacatccatatgaggcttacgcggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgagagagataaacca 949  Q
    ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  40454222 ctacatcatccatatgaggcttacgcggatcat-gcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgagagagataaatca 40454320  T
Q  950 gc-tcccaaccaagctttgggtacctccctttatctgtggatggttgagttt 1000  Q
    || |||||||||| ||||  |||||||||||||||||| |||| ||||||||    
T  40454321 gcttcccaaccaaacttt-tgtacctccctttatctgt-gatgtttgagttt 40454370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 138; E-Value: 1e-71
Query Start/End: Original strand, 150 - 291
Target Start/End: Original strand, 40458077 - 40458218
Alignment:
Q  150 aaacatatatacaacttctgttcctaatgtctctccttaataacaggaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 249  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40458077 aaacatatatacagcttctgttcctaatgtctctccttaataacaggaggctttaaaactaaaaattaaatcacagctatacaaatcaattgataccaaa 40458176  T
Q  250 aatatctcttcctagaataacaacagttgacttattttaaca 291  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  40458177 aatatctcttcctagaataacaacagttgacttattttaaca 40458218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 3116906 - 3117045
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||| ||    
T  3116906 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcataatgaatttagttaagaa 3117005  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||  ||||||||||||||||||||    
T  3117006 ccatacgaaaagcagctatggaattgtacctaagttttct 3117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 45408656 - 45408794
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  | |||||| |||| ||     
T  45408656 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaac 45408755  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  45408756 catacgaaaagcacctaaggaattgtacctaagttttct 45408794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 16705763 - 16705902
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||| |||||| |||||||| ||||||||||||||||    
T  16705763 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgagaaaatcatagtgaatttagttaaaaa 16705862  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||| ||||||    
T  16705863 ccatacgaaaagcacctaaggaattgtacctaaattttct 16705902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 24101973 - 24101834
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |  |||||||||| ||    
T  24101973 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtatatttagttaagaa 24101874  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  24101873 ccatacgaaaagcacctaaggaattgtacctaagttttct 24101834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 2818696 - 2818835
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||  ||||||||||||| ||    
T  2818696 cttttcgtatgattcttaactaaaaatacatattttttggatatatcaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 2818795  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||| ||||||| ||||||||||||||||||||    
T  2818796 ccatacgaaaaacacctaaagaattgtacctaagttttct 2818835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 9933710 - 9933572
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||| ||    
T  9933710 cttttcgtatggttcttaactaaaaatacatattttttagatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 9933611  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| |||||||| |||||||||||||||||||||||||    
T  9933610 ccataggaaaagca-ctaatgaattgtacctaagttttct 9933572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 12850683 - 12850546
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  | ||||||||||||||    
T  12850683 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttagttaaaaa 12850584  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
     ||||| ||||| |||||| ||||||||||||| ||||    
T  12850583 ccatacaaaaagtacctaaggaattgtacctaaatttt 12850546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 1924121 - 1923982
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||||| ||    
T  1924121 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 1924022  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  1924021 ccatacgaaaagcacctaagaaattgtacctaagttttct 1923982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 9281488 - 9281349
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  9281488 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 9281389  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| |||||| |||||| |||||||||| |||||||||    
T  9281388 ccatatgaaaagtacctaaggaattgtaccaaagttttct 9281349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 34490487 - 34490625
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |   ||||||||| ||     
T  34490487 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaac 34490586  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  34490587 catacgaaaagcacctaaggaattgtacctaagttttct 34490625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 7737094 - 7737234
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||||  | ||||||||||| |    
T  7737094 cttttggtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggctttgaggaaatcatggtaaatttagttaaga 7737193  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  7737194 atcatacgaaaagcacctaaggaattgtacctaagttttct 7737234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 29229506 - 29229363
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaac-ttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||     
T  29229506 acttttcgtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaag 29229407  T
Q  106 aaacatacg--aaaagcacctaatgaattgtacctaagttttct 147  Q
    || ||||||  |||||||| |||  |||||||||||||||||||    
T  29229406 aatcatacgaaaaaagcacataagtaattgtacctaagttttct 29229363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 29342806 - 29342663
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaac-ttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| |||||||     
T  29342806 acttttcgtatggttcttaactaaaaatacatattttttggatataataaacttttgagaaaattatggatttgaggaaatcatgatgaatatagttaag 29342707  T
Q  106 aaacatacg--aaaagcacctaatgaattgtacctaagttttct 147  Q
    || ||||||  |||||||| |||  |||||||||||||||||||    
T  29342706 aatcatacgaaaaaagcacataagtaattgtacctaagttttct 29342663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 27920602 - 27920741
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||| |||||||||||| |||||||||||||||||||| |||||| || |||||||||||||||||||||||||  ||||||||||||| ||    
T  27920602 cttttcgtatgggtcttaactaaaactacatattttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtgaatttagttaagaa 27920701  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| ||||  |||||||||||||||||||    
T  27920702 ccatacgaaaagcagctaaaaaattgtacctaagttttct 27920741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 22269753 - 22269891
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||| || ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |   ||||||||| ||     
T  22269753 ttttcgtatgatttttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgttttttttagttaagaac 22269852  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| |||| ||||||||| ||||||||||    
T  22269853 catacgaaaagcatctaaggaattgtacgtaagttttct 22269891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 34455915 - 34456056
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||| || ||||||||| |||  ||    
T  34455915 cttttcgtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatagatttgaggaaattatgatgaatttaattaggaa 34456014  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttcttc 149  Q
     |||||||||| ||| |||  |||||||||||| ||||||||    
T  34456015 ccatacgaaaaacacataagaaattgtacctaaattttcttc 34456056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 20 - 147
Target Start/End: Complemental strand, 42713907 - 42713779
Alignment:
Q  20 ttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaa 118  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||  ||||||||||||| || ||||||||||    
T  42713907 ttcttaactaaaaatacatatttttttggatataataaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 42713808  T
Q  119 gcacctaatgaattgtacctaagttttct 147  Q
     ||||||| ||||| || |||| ||||||    
T  42713807 acacctaaggaattatatctaaattttct 42713779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 20 - 147
Target Start/End: Original strand, 6605777 - 6605903
Alignment:
Q  20 ttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaag 119  Q
    |||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||  | ||||||| ||| || ||||| |||||    
T  6605777 ttcttaactaaaaatacatattatttggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttag-taagaaccatacaaaaag 6605875  T
Q  120 cacctaatgaattgtacctaagttttct 147  Q
    ||||||| ||||||||||||||||||||    
T  6605876 cacctaaagaattgtacctaagttttct 6605903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 43475975 - 43476115
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttt--ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||| |||||||| | ||||||||||| |||||||  ||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||| |    
T  43475975 ttttcgtatggttttaaactaaaaatatatattttttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaga 43476074  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||| ||||||| ||||| ||||||| ||||||    
T  43476075 accatacgaaaaacacctaaggaattatacctaaattttct 43476115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 119
Target Start/End: Original strand, 23835906 - 23836018
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||  | ||||| |||||||    
T  23835906 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaattttgttaaaa 23836005  T
Q  107 aacatacgaaaag 119  Q
    | |||||||||||    
T  23836006 accatacgaaaag 23836018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 372 - 802
Target Start/End: Complemental strand, 40092591 - 40092161
Alignment:
Q  372 ttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaa 471  Q
    ||||| ||||||||||| | |||||| || ||| |||||||||||||  ||||  | ||||| ||||  || || ||||||||||| ||||||||||| |    
T  40092591 ttagtaagcatatcagcaagttgttgttctgattttacaaacggaaatgcaataataccagcttcaatcttttctttgatgaaatgcctatcaatttcca 40092492  T
Q  472 catgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaa 571  Q
    | |||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| || |   |||| || || | | | ||| | || |     
T  40092491 cgtgttttgtgcgatcatgttggacagggttatgagcaatctctatggcagatttattgtcacagtaaagcttcattgcatcctcttgttcacatccaag 40092392  T
Q  572 gtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttc 671  Q
     ||    || |   |||| | ||||| ||||||||| ||||| | |||||| || || || |||||||| |||||||||||||| |||||| | || ||     
T  40092391 atcctttaaaaggtttttaatccatagcagttcacatattcctactgccatccccctgaattctgcttcggcacttgatctagcaactacttgttgtttt 40092292  T
Q  672 ttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatc 771  Q
    ||||||||||||||||| |  |||||||| |||||||| || || ||||  |||||  |||| ||||| || || || |||||||| ||||| || || |    
T  40092291 ttactcctccaagttactaaatttcctcccacaaaagttaagtagcctgcagtagactttctgtcatccgcagatccggcccaatcagcatcggtataac 40092192  T
Q  772 cttctaccctcaagtgaccattgtttgagaa 802  Q
    |||| ||  | | |||||||| |||||||||    
T  40092191 cttcgactttgaggtgaccatggtttgagaa 40092161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 20892914 - 20893053
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttt-tggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||| ||||| ||  |   ||||||||| |    
T  20892914 cttttcgtatggttcttaactaaaaatacatatttttatggatataacaaactttgagaaaattatggatttgatgaaattattgtatttttagttaaga 20893013  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||| || |||||||||||    
T  20893014 atcatacgaaaagcacctaaggaattata-ctaagttttct 20893053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 9850897 - 9850781
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||||||||| || |||||||  | ||||||||||| ||     
T  9850897 ttttcgtatggttcttaactaaaaatacatattttttg-atataacaaattttgagaaaattatggatttaagaaaatcatggtaaatttagttaagaac 9850799  T
Q  109 catacgaaaagcacctaa 126  Q
    ||||||||||||||||||    
T  9850798 catacgaaaagcacctaa 9850781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 7116399 - 7116534
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| |||||||||| |||||||||||||  ||| ||||||| || || ||| ||||||||||||||||||| ||||| ||  | |||||| |||| |    
T  7116399 acttttcgtatggttctcaactaaaaatacacctttgttggatagaacaatctttgagaaaattatggatttgatgaaattatggtaaatttatttaaga 7116498  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagt 142  Q
    | |||||||||| || ||||  ||||||||||||||    
T  7116499 accatacgaaaaacatctaagaaattgtacctaagt 7116534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 39243123 - 39242997
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||||||||||||||| ||||||||||||  | | |||||||||| |||||| || ||||| ||  |||||| |||||||  || ||||||||||| ||     
T  39243123 tttttgtatggttcttgactaaaaatacacctatgttggatataacaaactttgataaaatcataaatttgatgaaatcacgataaatttagttaagaat 39243024  T
Q  109 catacgaaaagcacctaatgaattgta 135  Q
    ||||||||||  ||||||  |||||||    
T  39243023 catacgaaaaatacctaagaaattgta 39242997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 83 - 147
Target Start/End: Original strand, 10552986 - 10553050
Alignment:
Q  83 aaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||  ||||||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  10552986 aaatcatggtgaatttagttaagaatcatacgaaaaacacctaaggaattgtacctaagttttct 10553050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 160
Target Start/End: Complemental strand, 22269775 - 22269711
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaacatatata 160  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||| || | |||||||    
T  22269775 tttagttaaaaatcatacgaaaaacacctaaggaattgtacctaagttttctccatatatatata 22269711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 16705786 - 16705735
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  16705786 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 16705735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 118
Target Start/End: Original strand, 40362533 - 40362622
Alignment:
Q  28 taaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaa 118  Q
    |||||||||| || ||||| |||||| |||||  |||||||||||| ||||||| |||||||  ||||||||||||| || ||||||||||    
T  40362533 taaaaatacacatgttttgaatataacaaactatgagaaaattatg-atttgagaaaatcatggtgaatttagttaagaaccatacgaaaa 40362622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 144
Target Start/End: Complemental strand, 2818719 - 2818671
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttt 144  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||    
T  2818719 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttt 2818671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 1924099 - 1924150
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  1924099 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 1924150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 3116929 - 3116878
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||| || ||||||||||||||||||||    
T  3116929 tttagttaagaaccatacgaaaagcaccaaaagaattgtacctaagttttct 3116878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 9281465 - 9281516
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  9281465 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 9281516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 20892937 - 20892886
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  20892937 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 20892886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 23835929 - 23835878
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  23835929 tttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttct 23835878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 24101950 - 24102001
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  24101950 tttagttaagaaccatacgaaaagcacctaaggaattgtacttaagttttct 24102001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 34455938 - 34455887
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||||||    
T  34455938 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 34455887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 34490509 - 34490458
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  34490509 tttagttaagaaccatacgaaaaacacctaaagaattgtacctaagttttct 34490458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 147
Target Start/End: Original strand, 43858548 - 43858603
Alignment:
Q  92 tgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| || ||||||||||| |||||| ||||||||||||| ||||||    
T  43858548 tgaatttagttaagaaccatacgaaaagtacctaaggaattgtacctaaattttct 43858603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 7737117 - 7737066
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| ||||||||||||  |||||||||||||||||||    
T  7737117 tttagttaagaatcataccaaaagcacctaagaaattgtacctaagttttct 7737066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 9933687 - 9933738
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||| ||||||    
T  9933687 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaaattttct 9933738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 45408678 - 45408627
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||| ||||||| ||||||||||||||||||||    
T  45408678 tttagttaagaaccatacaaaaaacacctaaggaattgtacctaagttttct 45408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 74
Target Start/End: Complemental strand, 17434821 - 17434755
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatgg 74  Q
    |||| ||||| |||||||||||| | | ||||||||| |||||||| |||||| |||||||||||||    
T  17434821 ttttcgtatgattcttaactaaataaatatatttttttggatataacaaactttgagaaaattatgg 17434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 22346516 - 22346434
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataa-taaacttcgagaaaattatggatttgaggaaatcat 89  Q
    ||||| |||||||| |||||||||||||||| |||||||| | |||  ||||||  ||||||||||| |||||| || |||||    
T  22346516 cttttcgtatggtttttaactaaaaatacatcttttttggttttaacaaaactttcagaaaattatgaatttgatgatatcat 22346434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 147
Target Start/End: Complemental strand, 6605777 - 6605740
Alignment:
Q  110 atacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  6605777 atacgaaaagcacataaggaattgtacctaagttttct 6605740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 43475997 - 43475944
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttc 149  Q
    ||||||| |||| |||||||||| ||||| | ||||||||| ||||||||||||    
T  43475997 tttagtttaaaaccatacgaaaatcacctgaggaattgtacataagttttcttc 43475944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 276 - 938
Target Start/End: Complemental strand, 39745776 - 39745115
Alignment:
Q  276 ttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgttaaacaccttgctcgatactcctttag 375  Q
    ||||||||| |||||||||||  |||| ||||||||||||| ||||||||||||||||||| ||  || |||||||||||  |||| |  |||||||| |    
T  39745776 ttgacttatcttaacacccccactcaaattggtgcatggatatcacacattcccaacttgaataatgactcgttaaacactctgcttgtcactcctttgg 39745677  T
Q  376 tgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaacatg 475  Q
    |||| | ||| ||||| ||  | || ||||||||||| |||||   ||||   ||||| ||||| || || |||||||||||||||||||| || |||||    
T  39745676 tgagaacatcggctaactgcagttccgatcttacaaagggaaaggaaattactccagcttcaagcttttctttgatgaaatgtctatcaatctctacatg 39745577  T
Q  476 ttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaagtct 575  Q
    |||||| | ||||||||||||||||||||| |||||  |||| || |||||||||||||| ||||| ||||||||||| ||||| | ||||||||  |||    
T  39745576 ttttgttctatcatgttggacaggattatgagcaattgctattgctgatgtattatcacagtacaacctcatagcttcctttggtttaaaacccatatct 39745477  T
Q  576 gacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttcttac 675  Q
    ||||| ||| ||  |||||| || |||||||| |  ||||||||||| ||||||||||||||||||||||| ||||| ||||| || || || || ||||    
T  39745476 gacaaaacatttcgtacccacaaaagttcacataccccaagtgccatgcctctaaactctgcttcagcactagatcttgctaccaccggttgttttttac 39745377  T
Q  676 tcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatccttc 775  Q
    ||||||| |||||||| |||||||||||||| || || || || |||||||| |||||||||| |  ||| ||||||||||| ||||| ||||| |||||    
T  39745376 tcctccaggttacaagatttcctcctacaaacgtaaagtaaccagaggtagaccttctatcattttttgaccctgcccaatcagcatcggtgtacccttc 39745277  T
Q  776 taccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctctctacaacatccatatgaggcttacgc 875  Q
     |||   ||||  ||||  |||||||| || |||||||| || ||||| || ||||||||||| || |||||||| |||||||||||||||||||| ||     
T  39745276 aacctctaagtttccatgatttgagaataaaattccttttccaggagtagacttcaaatatctcaaaatcctctcaacaacatccatatgaggcttgcgt 39745177  T
Q  876 ggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgaga 938  Q
    ||||||| ||||||| ||||| |||||||| |||||||| || || || || |||||||||||    
T  39745176 ggatcat-gcataaattgactaacaacatttactgcataggtaatatcaggacgtgtatgaga 39745115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 9 - 150
Target Start/End: Original strand, 40891044 - 40891185
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| ||     
T  40891044 ttttcgtacggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 40891143  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttcttca 150  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  40891144 catacgaaaagcacctaaggaattgtacctaagttttcttca 40891185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 38520048 - 38520187
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||||||||    
T  38520048 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaaaaa 38520147  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||||| ||| ||||||||||||||||||||    
T  38520148 acatacgaaaagcacttaaggaattgtacctaagttttct 38520187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 38629504 - 38629643
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  ||||||||||||| ||    
T  38629504 cttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 38629603  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||| ||||||| ||||||||||||||||||||    
T  38629604 ccatacgaaaaacacctaaggaattgtacctaagttttct 38629643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 29781100 - 29780963
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  | ||||||||||||||    
T  29781100 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaattatggtaaatttagttaaaaa 29781001  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
     |||||||||||||||||| ||||||||||||| ||||    
T  29781000 ccatacgaaaagcacctaaggaattgtacctaaatttt 29780963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 15882230 - 15882370
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||  ||||| ||||| |||||||||||||| |||||||  ||||||||||||| |    
T  15882230 ctttttgtatggttcttaactaaaaatacatatttttttggatataactaactttgagaatattatggatttgagaaaatcatggtgaatttagttaaga 15882329  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  15882330 accatacgaaaagcacctaaggaattgtacctaagttttct 15882370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 17426771 - 17426630
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt--ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    ||||| |||||||||||||||||||||  |||||||||  |||||||| |||||| ||||||||||| ||||||||||||||||  |||||||||||||     
T  17426771 cttttcgtatggttcttaactaaaaatgtatattttttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtgaatttagttaag 17426672  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    || |||||||||||||||||||||||||||||||||||||||    
T  17426671 aaccatacgaaaagcacctaatgaattgtacctaagttttct 17426630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 12234496 - 12234636
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaa-cttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||||||||||  ||||||||||||| |    
T  12234496 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaaactttgagaaaattatgaatttgaggaaatcatcgtgaatttagttaata 12234595  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||||||||||| ||||  |||||||||||||||||||    
T  12234596 accatacgaaaagcatctaagaaattgtacctaagttttct 12234636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 4262110 - 4261989
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||||||||||| ||||||||||||||||||| |||||| |||||| |||||||||||||| |||||||||||||| ||||||||||||| || ||||||    
T  4262110 tatggttcttaattaaaaatacatattttttgaatataacaaactttgagaaaattatggacttgaggaaatcatagtgaatttagttaagaaccatacg 4262011  T
Q  115 aaaagcacctaatgaattgtac 136  Q
    |||||||||||| |||||||||    
T  4262010 aaaagcacctaaagaattgtac 4261989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 8 - 148
Target Start/End: Original strand, 37114268 - 37114408
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||  ||||||||||||| ||    
T  37114268 cttttcgtatggttcttaattaaaaatacatattttttggatataataaactttgagaaaattatggatttaagaaaatcatggtgaatttagttaagaa 37114367  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttctt 148  Q
     ||||| |||| || |||| ||||||||||||| |||||||    
T  37114368 ccatacaaaaaacatctaaagaattgtacctaaattttctt 37114408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 24741963 - 24741827
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||||||||||||||||||||||  | | ||| ||||||||||||  |||||||| |||||||||||||||||||  ||||||||||||| ||     
T  24741963 ttttcgtatggttcttaactaaaaatacacctatgttgcatataataaactctgagaaaatcatggatttgaggaaatcatggtgaatttagttaagaac 24741864  T
Q  109 catacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||||||||||| ||||||||||||||||||    
T  24741863 catacgaaaagcacctaaggaattgtacctaagtttt 24741827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 8210353 - 8210492
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||| |||||||||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||| ||||| ||    
T  8210353 cttttcgtatgattcttaactaaatatatatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttggttaagaa 8210452  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||| |||| || |||| ||||||||| ||||||||||    
T  8210453 tcatacaaaaaacatctaaggaattgtacttaagttttct 8210492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 35467200 - 35467337
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||| |||||||||||||||||||||| |||||||||  ||| ||||||  |||||||||||||||| | |||||||| |||||||||||||| |    
T  35467200 actttttgtgtggttcttaactaaaaatacatcttttttggag-taacaaactttaagaaaattatggatttaaagaaatcatgatgaatttagttaaga 35467298  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    | |||||||||||||| ||| ||||||||| ||||||||    
T  35467299 accatacgaaaagcacataaggaattgtacgtaagtttt 35467337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 23940946 - 23940806
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttgga-tataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||| |||||||||||||||||||||||  | ||||| |||||| |||||||||| |||||||||||||||||  ||||||||||||| |    
T  23940946 cttttcgtatggtttttaactaaaaatacatatttttttaaatataacaaactttgagaaaattacggatttgaggaaatcatggtgaatttagttaaga 23940847  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||| |||  ||||||||| |||||||||    
T  23940846 atcatacgaaaagcacttaagaaattgtaccgaagttttct 23940806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 24211419 - 24211280
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||| || ||||||||||||||| ||||||| |||||  |||||||||||||| || ||||||| |   |||||||| |||| ||    
T  24211419 cttttcgtatggttcttaaatagaaatacatattttttagatataacaaactatgagaaaattatggaattaaggaaattacggtgaatttaattaagaa 24211320  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  24211319 ccatacgaaaagcacctaaagaattgtacctaagttttct 24211280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 33100786 - 33100647
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||| |||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| |   |   ||||||||| ||    
T  33100786 cttttcgtacggttcttaactaaaaaaacatatttttttgatataacaaactttgagaaaattatggatttgaggaaataacggtatttttagttaagaa 33100687  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  33100686 ccatacgaaaagcacctaagaaattgtacctaagttttct 33100647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 372 - 802
Target Start/End: Complemental strand, 12462948 - 12462518
Alignment:
Q  372 ttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaa 471  Q
    ||||| ||||||||||| | |||||| || ||| |||||||||||||  ||||  | ||||| ||||  || || ||||||||||| ||||||||||| |    
T  12462948 ttagtaagcatatcagcaagttgttgttctgattttacaaacggaaatgcaataataccagcttcaatcttttctttgatgaaatgcctatcaatttcca 12462849  T
Q  472 catgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaa 571  Q
    | |||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| || |   |||| || || | | | ||| | || |     
T  12462848 cgtgttttgtgcgatcatgttggacagggttatgagcaatctctatggcagatttattgtcacagtaaagcttcattgcatcctcttgttcacatccaag 12462749  T
Q  572 gtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttc 671  Q
     ||    || |   |||| | ||||| ||||||||| ||||| | |||||| || || || |||||||| |||||||||||||| |||||| | || ||     
T  12462748 atcctttaaaaggtttttaatccatagcagttcacatattcctactgccatccccctgaattctgcttcggcacttgatctagcaactacttgttgtttt 12462649  T
Q  672 ttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatc 771  Q
    ||||||||||||||||| |  |||||||| |||||||| || || ||||  |||||  |||| ||||| || || || |||||||| ||||| || || |    
T  12462648 ttactcctccaagttactaaatttcctcccacaaaagttaagtagcctgcagtagactttctgtcatccgcagatccggcccaatcagcatcggtataac 12462549  T
Q  772 cttctaccctcaagtgaccattgtttgagaa 802  Q
    |||| ||  | | |||||||| |||||||||    
T  12462548 cttcgactttgaggtgaccatggtttgagaa 12462518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 38405167 - 38405305
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| |||||| |||||||||| | |||| || ||||||| ||||||||||||||     
T  38405167 actttttgtatggttcttaactaaaaatacatctttttttggatataacaaactttgagaaaattacgaatttaagaaaatcattatgaatttagttaag 38405266  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    || ||||| |||| ||| |||  ||||||| |||||||||    
T  38405267 aaccatacaaaaaacacataagaaattgta-ctaagtttt 38405305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 14834795 - 14834676
Alignment:
Q  23 ttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcac 122  Q
    |||||||||||||||| ||||||| |||||| |||||| ||   ||||||| |||| || |||||||  ||||||||||||| || ||||||||||||||    
T  14834795 ttaactaaaaatacatcttttttgtatataacaaactttga---aattatgaatttaagaaaatcatggtgaatttagttaagaaccatacgaaaagcac 14834699  T
Q  123 ctaatgaattgtacctaagtttt 145  Q
     ||| ||||||||| ||||||||    
T  14834698 gtaaggaattgtacgtaagtttt 14834676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 33390679 - 33390813
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||||| ||| |||||||||||||||||||  ||| ||| |||||  ||||| ||||||||| || ||||||||||||| | |  ||||||| ||||||     
T  33390679 tttttgcatgattcttaactaaaaatacat--tttgtggttataacgaactttgagaaaattgtgaatttgaggaaatcgtgagtaatttagctaaaaac 33390776  T
Q  109 catacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||| ||||||||||||| ||| || |||||||||||    
T  33390777 catatgaaaagcacctaaggaaatgcacctaagtttt 33390813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 19 - 126
Target Start/End: Complemental strand, 11828733 - 11828619
Alignment:
Q  19 gttcttaactaaaaatacatattttttg-------gatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacat 111  Q
    |||||||||||||||||||||||||||        ||||||| |||||| |||||||| |||||||||||||||| ||  ||||||||||||| || |||    
T  11828733 gttcttaactaaaaatacatattttttttttgttagatataacaaactttgagaaaataatggatttgaggaaattatggtgaatttagttaagaaccat 11828634  T
Q  112 acgaaaagcacctaa 126  Q
    ||||||| |||||||    
T  11828633 acgaaaaacacctaa 11828619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 40393760 - 40393891
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||| ||||||||||||||||||||||||| |||||||| ||| || ||||||||||   |||||||||||| ||  ||||||||| ||| || ||||      
T  40393760 tatgattcttaactaaaaatacatatttttgggatataacaaattttgagaaaatta-aaatttgaggaaattatggtgaatttagctaagaaccataat 40393858  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||  |||||| | ||||||||||    
T  40393859 aaaagcacctaagaaattgtgcttaagttttct 40393891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Original strand, 10778687 - 10778768
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcat 89  Q
    ||||| ||||||||||||||||||||||||| |||| ||| ||||| |||||| ||||| ||| || |||||||||||||||    
T  10778687 cttttcgtatggttcttaactaaaaatacattttttgtggctataacaaactttgagaagattgtgaatttgaggaaatcat 10778768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 147
Target Start/End: Original strand, 38515588 - 38515673
Alignment:
Q  62 gagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||||||||||||||||||  |   |||| ||||||| || |||||| ||| |||| ||||||||||||||||||||    
T  38515588 gagaaaattatggatttgaggaaatcattgtatttttaattaaaaaccacacgaaatgcatctaaggaattgtacctaagttttct 38515673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 95 - 147
Target Start/End: Complemental strand, 8210377 - 8210325
Alignment:
Q  95 atttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  8210377 atttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 8210325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 23940923 - 23940974
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| |||||||||||||||||| |||||||| |||||||||||    
T  23940923 tttagttaaaaaccatacgaaaagcacctaaggaattgtaactaagttttct 23940974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 4035771 - 4035837
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatgg 74  Q
    ||||| ||||||| |||||||||||||| ||||||||||||||||| ||| || |||||||| ||||    
T  4035771 cttttcgtatggtacttaactaaaaatatatattttttggatataacaaattttgagaaaatcatgg 4035837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 15882253 - 15882202
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  15882253 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 15882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 17426748 - 17426799
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  17426748 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttct 17426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 24211409 - 24211452
Alignment:
Q  109 catacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  24211409 catacgaaaagcacctaaggaattgtacctaagttttctccaaa 24211452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 37114291 - 37114240
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||||||    
T  37114291 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 37114240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 12234519 - 12234468
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||| || ||||| ||||||||||||||    
T  12234519 tttagttaagaaccatacgaaaagcacccaaagaattatacctaagttttct 12234468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 29781077 - 29781128
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| |||||| |||||||||||||    
T  29781077 tttagttaagaaccatacgaaaagcatctaaggaattggacctaagttttct 29781128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 28 - 78
Target Start/End: Complemental strand, 1568688 - 1568638
Alignment:
Q  28 taaaaatacatattttttggatataataaacttcgagaaaattatggattt 78  Q
    |||||||||||||||| ||| ||||||||| ||  ||||||||||||||||    
T  1568688 taaaaatacatattttatggttataataaattttaagaaaattatggattt 1568638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 26261534 - 26261497
Alignment:
Q  115 aaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||| |||| |||||||||||||||||||||||||    
T  26261534 aaaagcatctaaggaattgtacctaagttttcttcaaa 26261497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 215; Significance: 1e-117; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-117
Query Start/End: Original strand, 276 - 938
Target Start/End: Original strand, 27513926 - 27514587
Alignment:
Q  276 ttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgttaaacaccttgctcgatactcctttag 375  Q
    ||||||||| |||||||||||  |||||||||||||||||| ||||||||||||||||||| ||  || || ||||||||  | || |  |||||||| |    
T  27513926 ttgacttatcttaacacccccactcaagttggtgcatggatatcacacattcccaacttgaataatgactcattaaacactcttcttgtcactcctttgg 27514025  T
Q  376 tgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaacatg 475  Q
    |||| | ||| ||||| ||  | || ||||||||||| |||||   ||||   ||||| ||||| || || |||||||||||||||||||| || |||||    
T  27514026 tgagaacatcggctaactgcagttccgatcttacaaagggaaaggaaattactccagcttcaagcttttctttgatgaaatgtctatcaatctctacatg 27514125  T
Q  476 ttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaagtct 575  Q
    |||||| | ||||||||||||| ||||||| |||||  |||| || |||||||||||||||||||| ||||||||||| ||||| | ||||||||  |||    
T  27514126 ttttgttctatcatgttggacaagattatgagcaattgctattgctgatgtattatcacaatacaacctcatagcttcctttggtttaaaacccatatct 27514225  T
Q  576 gacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttcttac 675  Q
    ||||| ||| ||  |||||| || |||||||| |  ||||||||||| ||||||||||||||||||||||| ||||| ||||| || || || || ||||    
T  27514226 gacaaaacatttcgtacccacaaaagttcacataccccaagtgccatgcctctaaactctgcttcagcactagatcttgctaccaccggttgttttttac 27514325  T
Q  676 tcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatccttc 775  Q
    ||||||| |||||||| |||||||||||||| || || || || |||||||| |||||||||| |  ||| ||||||||||| ||||| ||||| |||||    
T  27514326 tcctccaggttacaagatttcctcctacaaacgtaaagtaaccagaggtagaccttctatcattttttgaccctgcccaatcagcatcggtgtacccttc 27514425  T
Q  776 taccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctctctacaacatccatatgaggcttacgc 875  Q
     |||   ||||  ||||  |||||||| || |||||||| || ||||| || ||||||||||| || |||||||| |||||||||||||||||||| ||     
T  27514426 aacctctaagtttccatgatttgagaataaaattccttttccaggagtagacttcaaatatctcaaaatcctctcaacaacatccatatgaggcttgcgt 27514525  T
Q  876 ggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgaga 938  Q
    ||||||| ||||||| ||||| |||||||| |||||||| || || || || |||||||||||    
T  27514526 ggatcat-gcataaattgactaacaacatttactgcataggtaatatcaggacgtgtatgaga 27514587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 276 - 938
Target Start/End: Original strand, 9717361 - 9718022
Alignment:
Q  276 ttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgttaaacaccttgctcgatactcctttag 375  Q
    ||||||||| |||||||||||  |||| ||||||||||||| ||||||||||||||||||| ||  || || ||||||||  |||| |  |||||||| |    
T  9717361 ttgacttatcttaacacccccactcaatttggtgcatggatatcacacattcccaacttgaataatgactcattaaacactctgcttgtcactcctttgg 9717460  T
Q  376 tgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaacatg 475  Q
    |||| | ||| ||||| ||  | || ||||||||||| |||||   ||||   ||||| ||| | || || |||||||||||||||||||| || |||||    
T  9717461 tgagaacatcggctaactgcagttccgatcttacaaagggaaaggaaattactccagcttcacgcttttctttgatgaaatgtctatcaatctctacatg 9717560  T
Q  476 ttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaagtct 575  Q
    |||||| | ||||||||||||||||||||| |||||  |||| || |||||||||||||| ||||| ||||||||||| ||||| | ||||||||  |||    
T  9717561 ttttgttctatcatgttggacaggattatgagcaattgctattgctgatgtattatcacagtacaacctcatagcttcctttggtttaaaacccatatct 9717660  T
Q  576 gacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttcttac 675  Q
    ||||| ||| ||  |||||| || |||||||| |  ||||||||||| ||||||||||||||||||||||| ||||| ||||| || || || || ||||    
T  9717661 gacaaaacatttcgtacccacaaaagttcacataccccaagtgccatgcctctaaactctgcttcagcactagatcttgctaccaccggttgttttttac 9717760  T
Q  676 tcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatccttc 775  Q
    ||||||| |||||||| ||||||||||||||  | || || || |||||||| |||||||||| |  ||| ||||||||||| ||||| ||||| |||||    
T  9717761 tcctccaggttacaagatttcctcctacaaacataaagtaaccagaggtagaccttctatcattttttgaccctgcccaatcagcatcggtgtacccttc 9717860  T
Q  776 taccctcaagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctctctacaacatccatatgaggcttacgc 875  Q
     |||   ||||  ||||  |||||||| || |||||||| |  ||||| || ||||||||||| || |||||||| ||| |||||||||||||||| ||     
T  9717861 aacctctaagtttccatgatttgagaataaaattccttttctaggagtagacttcaaatatctcaaaatcctctcaacagcatccatatgaggcttgcgt 9717960  T
Q  876 ggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgaga 938  Q
    ||||||| ||||||| ||||| |||||||| |||||||| || || || || |||||||||||    
T  9717961 ggatcat-gcataaattgactaacaacatttactgcataggtaatatcaggacgtgtatgaga 9718022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 2e-52
Query Start/End: Original strand, 9 - 150
Target Start/End: Complemental strand, 14387155 - 14387014
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| ||     
T  14387155 ttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 14387056  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttcttca 150  Q
    ||||||||| ||| |||| |||||||||||||||||||||||    
T  14387055 catacgaaatgcatctaaggaattgtacctaagttttcttca 14387014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 19955053 - 19954913
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| |    
T  19955053 actttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 19954954  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |  ||||||||||||| ||| ||||||||||||||||||||    
T  19954953 actatacgaaaagcacataaggaattgtacctaagttttct 19954913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 8 - 152
Target Start/End: Original strand, 5189499 - 5189643
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| ||    
T  5189499 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 5189598  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
     ||||||||||||| |||| ||||||||||||| |||||||||||    
T  5189599 ccatacgaaaagcatctaaggaattgtacctaaattttcttcaaa 5189643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 27241059 - 27240926
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| || |||||    
T  27241059 gtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaaccatac 27240960  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| ||||||||||||||||||||    
T  27240959 gaaaagcacctaaggaattgtacctaagttttct 27240926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 9978193 - 9978053
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  9978193 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 9978094  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||| ||| ||||||||||||| ||||||    
T  9978093 atcatacgaaaagcacataaggaattgtacctaaattttct 9978053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 2854673 - 2854534
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  2854673 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 2854574  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||| | |||| ||||||||||||||||||||    
T  2854573 ccatacgaaaagtatctaaggaattgtacctaagttttct 2854534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 3607870 - 3607731
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||    
T  3607870 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 3607771  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||| ||||||||||||  |||| ||||||| ||||||    
T  3607770 ccatacaaaaagcacctaagaaattctacctaaattttct 3607731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 23698643 - 23698504
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  23698643 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 23698544  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||| | |||| ||||||||||||||||||||    
T  23698543 ccatacgaaaagtatctaaggaattgtacctaagttttct 23698504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 42561436 - 42561297
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||  ||||||||||||| ||    
T  42561436 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaa 42561337  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||| |||| |||||    
T  42561336 ccatacgaaaagcacctaaggaattgtacttaagatttct 42561297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 48954355 - 48954216
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  48954355 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 48954256  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| |||||| |||||| ||||||||||||||||||||    
T  48954255 ccatatgaaaagtacctaaggaattgtacctaagttttct 48954216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 15324656 - 15324796
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  15324656 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 15324755  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||| ||| ||||||||| ||| ||||||    
T  15324756 accatacgaaaagcacataaggaattgtacataaattttct 15324796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 1387808 - 1387947
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  |   ||||||||| ||    
T  1387808 cttttcgtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatgaatttgaggaaatcatggtatctttagttaagaa 1387907  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||| ||||||    
T  1387908 ccatacgaaaagcacctaaggaattgtacctaaattttct 1387947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 19797122 - 19796983
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||||  |   ||||||||||||    
T  19797122 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgaggaaatcatggtatttttagttaaaaa 19797023  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  19797022 ccatacgaaaagcacctaagaaattgtacctaagttttct 19796983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 47940711 - 47940572
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||||| ||    
T  47940711 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 47940612  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  47940611 ccatacgaaaagcacctaagaaattgtacctaagttttct 47940572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 50627161 - 50627300
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  50627161 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 50627260  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||  ||| ||||||||||||||||||||    
T  50627261 ccatacgaaaagcatataaggaattgtacctaagttttct 50627300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 27670175 - 27670313
Alignment:
Q  10 ttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaac 109  Q
    ||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  27670175 ttttgtatgattcttaactaaaaatacatattttttgaatataaaaaactttgagaaaattatggatttaaggaaatcatgatgaatttagttaaaaacc 27670274  T
Q  110 atacgaaaagcacctaatgaattgt-acctaagttttct 147  Q
    ||||||||||||| ||| |||||||  ||||||||||||    
T  27670275 atacgaaaagcacataaggaattgtgccctaagttttct 27670313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 40647146 - 40647287
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttgg--atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    ||||| || |||||||||||||||||||||||||||||    |||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||||    
T  40647146 cttttcgtgtggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaa 40647245  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    || |||||||||||||||||| ||||||||||||||||||||    
T  40647246 aatcatacgaaaagcacctaaggaattgtacctaagttttct 40647287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 51276836 - 51276697
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||| |||||||||||| ||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||    
T  51276836 cttttcgtatggttcttagctaaaaatacattttttttttatataataaactttgagaaaattatggatttgaggaaatcataatgaatttagttaagaa 51276737  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||   |||| ||||||| ||||||    
T  51276736 ccatacgaaaagcacctatgaaattatacctaaattttct 51276697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 27926393 - 27926253
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt--ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||| |||||| |||||||||||||||| |||||||||| | |||||||||||||     
T  27926393 cttttcgtatggttcttaactaaaaatacatattttttttggatataacaaactttgagaaaattatggatt-gaggaaatcacagtgaatttagttaag 27926295  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    || |||||||||||||| ||| ||||| ||||||||||||||    
T  27926294 aaccatacgaaaagcacataaggaattatacctaagttttct 27926253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 51789736 - 51789599
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||| ||||  ||||| ||||||| | |||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  51789736 cttttcgtatggttcttaactaaaaacacat--tttttagatataacatactttgagaaaattatggaattgaggaaatcatggtgaatttagttaaaaa 51789639  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||| ||||||| ||||||||||||||||||||    
T  51789638 ccatacgaaaatcacctaaggaattgtacctaagttttct 51789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 27928438 - 27928302
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||| | ||||||||||||| ||    
T  27928438 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatt-gaggaaatcacagtgaatttagttaagaa 27928340  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
     ||||| |||||||| ||| |||||||| |||||||||    
T  27928339 ccatacaaaaagcacataaggaattgtatctaagtttt 27928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 26208454 - 26208594
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| ||||| ||  ||||||||||| | |    
T  26208454 cttttcgtatggttctcaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaattatggtgaatttagttcaga 26208553  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||| ||| ||||||||||    
T  26208554 accatacgaaaagcacctaaggaattatacataagttttct 26208594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 50162680 - 50162540
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||| |||||||| ||||||   |||||||| ||||||    
T  50162680 ctttttgtatggttcttaactaaaattacatatttttttggatataacaaactttgagaaaattatagatttgagaaaatcacggtgaatttaattaaaa 50162581  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||| ||||  |||||| ||||||||||||||||||||    
T  50162580 accatacaaaaaatacctaaggaattgtacctaagttttct 50162540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 6079415 - 6079526
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||| ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| ||     
T  6079415 ttttcgtacggttcttcactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaac 6079514  T
Q  109 catacgaaaagc 120  Q
    ||||||||||||    
T  6079515 catacgaaaagc 6079526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 48645145 - 48645037
Alignment:
Q  18 ggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaa 117  Q
    |||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| || |||||||||    
T  48645145 ggttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaagcatacgaaa 48645046  T
Q  118 agcacctaa 126  Q
    |||||||||    
T  48645045 agcacctaa 48645037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 957618 - 957756
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttg-gatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| ||||||||||||| ||||||||||||  ||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| |    
T  957618 cttttcgtatgattcttaactaaaattacatattttttttgatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaga 957717  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    | |||||||||| |||||||  ||||||| |||||||||    
T  957718 atcatacgaaaaacacctaagaaattgtatctaagtttt 957756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 4299535 - 4299415
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt---ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||| ||||||||||||||||||||||||||||||||   |||||||| |||||| ||||||||||||||||||||||||| ||  |||||||||||||     
T  4299535 ttttcgtatggttcttaactaaaaatacatatttttttttggatataacaaactttgagaaaattatggatttgaggaaataatggtgaatttagttaag 4299436  T
Q  106 aaacatacgaaaagcacctaa 126  Q
    |  ||||||||||| ||||||    
T  4299435 agccatacgaaaagtacctaa 4299415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 2125211 - 2125072
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||| |||||| |||||||||||  |||| |  |||||||  ||||||||||||| ||    
T  2125211 cttttcgtatagttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattataaatttaaaaaaatcatggtgaatttagttaagaa 2125112  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||| |||  ||||||| |||| ||||||    
T  2125111 ccatacgaaaagcacataagaaattgtaactaaattttct 2125072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 372 - 535
Target Start/End: Original strand, 8189570 - 8189733
Alignment:
Q  372 ttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaa 471  Q
    ||||| ||||||||||| | |||||| || ||| |||||||||||||  ||||  | ||||| ||||  || || ||||||||||| ||||||||||| |    
T  8189570 ttagtaagcatatcagcaagttgttgttctgattttacaaacggaaatgcaataataccagcttcaatcttttctttgatgaaatgcctatcaatttcca 8189669  T
Q  472 catgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcaca 535  Q
    | |||||||| ||||||||||||| ||| ||||| |||||||||||||||||| |||| |||||    
T  8189670 cgtgttttgtgcgatcatgttggagagggttatgagcaatctctatggcagatttattgtcaca 8189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 7 - 89
Target Start/End: Original strand, 9895282 - 9895364
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcat 89  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||    
T  9895282 acttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatgtatttgaggaaatcat 9895364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 21930411 - 21930547
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacata-ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||||||| |||||||||||||| ||||||  |||||||||||||||| | |||   ||  ||||||||||||| ||    
T  21930411 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttaagaaaattatggatttaaagaa---atggtgaatttagttaagaa 21930507  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||| |||||||  |||||||||||| ||||||    
T  21930508 ccatacgaaaaacacctaagtaattgtacctaaattttct 21930547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 9 - 104
Target Start/End: Original strand, 29598354 - 29598449
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||| |||||||| | |||||||||||||||||||||  |||||| |||||| ||||||||||||||||| ||||||||||| |||||||||||||    
T  29598354 ttttcgtatggttatcaactaaaaatacatatttttttaatataacaaactttgagaaaattatggatttaaggaaatcatagtgaatttagttaa 29598449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 50856450 - 50856325
Alignment:
Q  23 ttaactaaaaatacatat---tttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaag 119  Q
    |||| |||||||||||||   ||||||||||||| ||| || |||||||||||||| |||||||||| ||  ||||||||| ||| || |||||||||||    
T  50856450 ttaagtaaaaatacatatatttttttggatataacaaattttgagaaaattatggacttgaggaaataatggtgaatttagctaagaatcatacgaaaag 50856351  T
Q  120 cacctaatgaattgtacctaagtttt 145  Q
    ||||||| ||||| ||||||||||||    
T  50856350 cacctaaagaattttacctaagtttt 50856325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 17 - 86
Target Start/End: Original strand, 28243997 - 28244066
Alignment:
Q  17 tggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaat 86  Q
    |||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||| |||||||    
T  28243997 tggttcttaactaaaaatacatcttttttggatataacaaactttgagaaaattatggatttaaggaaat 28244066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 55 - 147
Target Start/End: Original strand, 36880588 - 36880680
Alignment:
Q  55 aaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| ||||||||||||||||||||||||||||  |   ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  36880588 aaactttgagaaaattatggatttgaggaaatcatggtatttttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 36880680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 22339118 - 22338988
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||||||||||||||||||||||  ||| ||||||| || | |||| |||||||| |||||||||| ||||||||  ||| ||||||||| || ||  ||    
T  22339118 tatggttcttaactaaaaatacacctttgttggatagaacagactttgagaaaatgatggatttgatgaaatcatggtgagtttagttaagaaccaatcg 22339019  T
Q  115 aaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||| || | |||||||||| |||||||    
T  22339018 aaaagcaacttaggaattgtacccaagtttt 22338988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 40 - 145
Target Start/End: Complemental strand, 49284403 - 49284298
Alignment:
Q  40 ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtaccta 139  Q
    |||||||||||||| |||||| || |||||||||||||| || |||||||  ||||||||||||| || ||||| |||| || ||||  |||||||||||    
T  49284403 ttttttggatataacaaactttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaaccatacaaaaaacaactaagaaattgtaccta 49284304  T
Q  140 agtttt 145  Q
    ||||||    
T  49284303 agtttt 49284298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 593 - 757
Target Start/End: Original strand, 8189791 - 8189955
Alignment:
Q  593 ccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttcttactcctccaagttacaagg 692  Q
    ||||| ||||||||| ||||| | |||||| || || || |||||||| |||||||||||||| |||||| | || || ||||||||||||||||| |      
T  8189791 ccatagcagttcacatattcctactgccatccccctgaattctgcttcggcacttgatctagcaactacttgttgttttttactcctccaagttactaaa 8189890  T
Q  693 tttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatc 757  Q
    |||||||| ||||||||||| || ||||  |||||  |||| ||||| || || || ||||||||    
T  8189891 tttcctcccacaaaagtgaagtagcctgcagtagactttctgtcatccgcagatccggcccaatc 8189955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 28431844 - 28431733
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttt--ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||| ||| ||||||||||||| |  ||||  |||||||||||||| ||  | |||||||| ||||||| |||||||| ||||||||||||||||    
T  28431844 tttttgtatagtttttaactaaaaatataccttttgtttggatataataaattttaaaaaaattatagatttgaagaaatcatgatgaatttagttaaaa 28431745  T
Q  107 aacatacgaaaa 118  Q
    | ||||||||||    
T  28431744 atcatacgaaaa 28431733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 14 - 104
Target Start/End: Original strand, 2302439 - 2302529
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||||||||||||||||| ||||| ||| |||||| ||   ||||| |||||||||||| |||||||||||||||  ||||||| |||||    
T  2302439 gtatggttcttaactaaaattacatctttcttggatgtagcgaactttgagaaaattatgaatttgaggaaatcatggtgaattttgttaa 2302529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 16518443 - 16518302
Alignment:
Q  7 actttttgtatggttcttaactaaaaa-tacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaat--ttagtta 103  Q
    |||||| |||||||||||||  ||||| || || ||||||||||| || |||||  |||||||||||| | ||||| |||| ||  |||||  |||||||    
T  16518443 acttttcgtatggttcttaataaaaaaatagatcttttttggatacaacaaactatgagaaaattatgtaattgagaaaattatggtgaatatttagtta 16518344  T
Q  104 aaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||| ||||| ||||||||||||  ||||| |||||||||||    
T  16518343 aaaaccataccaaaagcacctaagaaattgcacctaagtttt 16518302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 39015331 - 39015253
Alignment:
Q  11 tttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcat 89  Q
    |||||||||||||||||| ||||||||  |||| ||| |||||  ||||| ||||||||||||||||||| ||||||||    
T  39015331 tttgtatggttcttaacttaaaatacactttttgtggttataacgaactttgagaaaattatggatttgaagaaatcat 39015253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 5189522 - 5189471
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  5189522 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 5189471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 9978170 - 9978221
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  9978170 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 9978221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 90
Target Start/End: Complemental strand, 18651380 - 18651309
Alignment:
Q  19 gttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcata 90  Q
    |||||||| ||||||||||| |||||| | ||||| ||| || |||||||||||||||||| ||||||||||    
T  18651380 gttcttaaataaaaatacattttttttagttataacaaattttgagaaaattatggatttggggaaatcata 18651309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 19797099 - 19797150
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  19797099 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 19797150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 49285093 - 49285144
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  49285093 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 49285144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 94 - 147
Target Start/End: Original strand, 362473 - 362526
Alignment:
Q  94 aatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||| || |||||||||||||||||| ||||||||||||| ||||||    
T  362473 aatttagttaagaatcatacgaaaagcacctaaagaattgtacctaaattttct 362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 2854650 - 2854701
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  2854650 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 2854701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 3607847 - 3607898
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  3607847 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 3607898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 4299513 - 4299564
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  4299513 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 4299564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 14387133 - 14387184
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  14387133 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 14387184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 15324679 - 15324628
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  15324679 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 15324628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 23698620 - 23698671
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  23698620 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 23698671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 27241042 - 27241093
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||| ||||||||||| ||||||||||||||||||||    
T  27241042 tttagttaagaaccatacgcaaagcacctaacgaattgtacctaagttttct 27241093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 27926370 - 27926421
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||| ||||||||||    
T  27926370 tttagttaagaaccatacgaaaagcacctaaggaattgtacataagttttct 27926421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 28 - 135
Target Start/End: Complemental strand, 35547821 - 35547714
Alignment:
Q  28 taaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaat 127  Q
    ||||||||||| |||||||||||||  ||||||  |||||||||||||||| | ||||| ||  ||| ||||||||| || ||||  |||||||| |||     
T  35547821 taaaaatacattttttttggatatatcaaacttatagaaaattatggatttaaagaaattatggtgattttagttaagaaccatataaaaagcacataag 35547722  T
Q  128 gaattgta 135  Q
     |||||||    
T  35547721 aaattgta 35547714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 36880320 - 36880363
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatata 52  Q
    |||| ||||||||| |||||||||||||||||||||||||||||    
T  36880320 ttttcgtatggttcctaactaaaaatacatattttttggatata 36880363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 42561413 - 42561464
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  42561413 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 42561464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 47940689 - 47940740
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  47940689 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 47940740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 48954332 - 48954383
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  48954332 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 48954383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 50162657 - 50162708
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  50162657 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 50162708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 50627184 - 50627133
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  50627184 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 50627133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 25297966 - 25298016
Alignment:
Q  97 ttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  25297966 ttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 25298016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 282 - 335
Target Start/End: Original strand, 2700975 - 2701028
Alignment:
Q  282 tattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttg 335  Q
    ||||| |||||||||| |||||||||||||| |||||||  |||||||||||||    
T  2700975 tatttcaacaccccccctcaagttggtgcatagatgtcaatcattcccaacttg 2701028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 16755266 - 16755307
Alignment:
Q  19 gttcttaactaaaaatacatattttttggatataataaactt 60  Q
    |||||||||||||||||||||| |||||||||||| ||||||    
T  16755266 gttcttaactaaaaatacatatgttttggatataacaaactt 16755307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 19955029 - 19955080
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| ||||| |||||| ||||||||||||||||||||    
T  19955029 tttagttaagaaccatacaaaaagtacctaaggaattgtacctaagttttct 19955080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 51276813 - 51276864
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||| ||| || ||||||||||||||||||  |||||||||||||||||||    
T  51276813 tttagctaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 51276864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 51789713 - 51789764
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||  ||| ||||||||||||||||||||    
T  51789713 tttagttaagaaccatacgaaaagcatttaaggaattgtacctaagttttct 51789764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 49285116 - 49285078
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttg 46  Q
    ||||| ||||||||||||||||||||||||||| |||||    
T  49285116 cttttcgtatggttcttaactaaaaatacatatcttttg 49285078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 22339102 - 22339151
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || |||| ||||||||||||| |||||| |||||||||||    
T  22339102 tttagttaagaaccatatgaaaagcacctaaagaattgcacctaagtttt 22339151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 52)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 276 - 938
Target Start/End: Original strand, 56389683 - 56390344
Alignment:
Q  276 ttgacttattttaacaccccccttcaagttggtgcatggatgtcacacattcccaacttgagtagagattcgttaaacaccttgctcgatactcctttag 375  Q
    ||||||||| |||||||||||  |||| ||||||||||||| ||||||||||||||||||| ||  || |||||||||||  |||| |  |||||||| |    
T  56389683 ttgacttatcttaacacccccactcaaattggtgcatggatatcacacattcccaacttgaataatgactcgttaaacactctgcttgtcactcctttgg 56389782  T
Q  376 tgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaacatg 475  Q
    |||| | ||| ||||| ||  | || ||||||||||| |||||   ||||   ||||| ||||| || || |||||||||||||||||||| || |||||    
T  56389783 tgagaacatcggctaactgcagttccgatcttacaaagggaaaggaaattactccagcttcaagcttttctttgatgaaatgtctatcaatctctacatg 56389882  T
Q  476 ttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaagtct 575  Q
    |||||| | ||||||||||||||||||||| |||||  |||| || |||||||||||||| ||||| ||||||||||| ||||| | ||||| ||  |||    
T  56389883 ttttgttctatcatgttggacaggattatgagcaattgctattgctgatgtattatcacagtacaacctcatagcttcctttggtttaaaactcatatct 56389982  T
Q  576 gacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttcttac 675  Q
    ||||| ||| ||  |||||| || |||||||| |  ||||||| ||| ||||||||||||||||||||||| ||||| | ||| || || || || ||||    
T  56389983 gacaaaacatttcgtacccacaaaagttcacataccccaagtgtcatgcctctaaactctgcttcagcactagatcttgttaccaccggttgttttttac 56390082  T
Q  676 tcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatccttc 775  Q
    ||||||| |||||||| |||||||||||||| || || || || |||||||| |||||||||| |  ||| ||||||||||| ||||| ||||| ||||     
T  56390083 tcctccaggttacaagatttcctcctacaaatgtaaagtaaccagaggtagaccttctatcattttttgaccctgcccaatcagcatcggtgtaccctt- 56390181  T
Q  776 taccctc-aagtgaccattgtttgagaacaatattcctttacctggagtggatttcaaatatcttaatatcctctctacaacatccatatgaggcttacg 874  Q
    || |||| ||||  ||||  |||||||| || |||||||| || ||||| || ||||||||||| || |||||||| |||||||||||||||||||| ||    
T  56390182 taacctctaagtttccatgatttgagaataaaattccttttccaggagtagacttcaaatatctcaaaatcctctcaacaacatccatatgaggcttgcg 56390281  T
Q  875 cggatcatggcataaactgactcacaacattcactgcataagtgatgtctggtcgtgtatgaga 938  Q
     ||||||| ||||||| ||||| |||||||| |||||||| || || || || |||||||||||    
T  56390282 tggatcat-gcataaattgactaacaacatttactgcataggtaatatcaggacgtgtatgaga 56390344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 13204406 - 13204546
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||    
T  13204406 actttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaa 13204505  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||||||||| || ||| ||||||||||||||||||||    
T  13204506 accatacgaaaagtacataaggaattgtacctaagttttct 13204546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 1298942 - 1299081
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| ||    
T  1298942 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 1299041  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| ||||||||||||| ||||||||||||||||||||    
T  1299042 ccataagaaaagcacctaaggaattgtacctaagttttct 1299081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 20435281 - 20435142
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  20435281 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaggaaatcatgatgaatttagttaagaa 20435182  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||  ||||||||||    
T  20435181 ccatacgaaaagcatctaaggaattgtatataagttttct 20435142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 530810 - 530671
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| ||  ||||||||||||| ||    
T  530810 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgatggtgaatttagttaagaa 530711  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||| |||||||||||| ||||||||||||||||||||    
T  530710 ccatacaaaaagcacctaaggaattgtacctaagttttct 530671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21048845 - 21048707
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||| ||    
T  21048845 cttttcgtatggttcttaactaaaaatacatattttttg-atataacaaacttcgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 21048747  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  21048746 ccatacgaaaagcatctaacgaattgtacctaagttttct 21048707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 18417687 - 18417826
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||| |||| ||    
T  18417687 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttaattaagaa 18417786  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||| |||||||||||| ||||||||||||||||||||    
T  18417787 ccatacaaaaagcacctaaggaattgtacctaagttttct 18417826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 42274633 - 42274494
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| ||    
T  42274633 ttttcgtatggttcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 42274534  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  42274533 ccatacgaaaagcatctaaggaattgtacctaagttttct 42274494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 27434640 - 27434779
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||| |||||||||||||||||||| |||||||||||||| |||||| |||||||||||| |||||||||||| ||  | ||||||||||| ||    
T  27434640 ctttttgtatagttcttaactaaaaatacattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtaaatttagttaagaa 27434739  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||| ||||||||||    
T  27434740 ccatacgaaaagcacctaaggaattgtacttaagttttct 27434779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 24915940 - 24915796
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatatt-----ttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagt 101  Q
    |||||||| ||||||||||||||||||||||||||     |||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||    
T  24915940 actttttg-atggttcttaactaaaaatacatattattttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagt 24915842  T
Q  102 taaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||| || |||||||||||||||||| ||||||||||||||||||||    
T  24915841 taagaaccatacgaaaagcacctaaggaattgtacctaagttttct 24915796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 4552822 - 4552954
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    ||||||| ||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| || |||||     
T  4552822 tatggtttttaactaaaaataaatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaaccataca 4552921  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||  ||| ||||||||||||||||||||    
T  4552922 gaaagcatataaggaattgtacctaagttttct 4552954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 24969685 - 24969543
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt---ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||| |||| |||||||||||||||||||| ||||||   |||||||| |||||| |||||||||||| |||||||||||||||  |||||||||||||    
T  24969685 cttttcgtatagttcttaactaaaaatacatttttttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaa 24969586  T
Q  105 aaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     || |||||||||||||||||| ||||||||||||||||||||    
T  24969585 gaaccatacgaaaagcacctaaagaattgtacctaagttttct 24969543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 32318854 - 32318722
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||| ||||||| |||||||| ||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  ||||||||||||| || ||||||    
T  32318854 tatgattcttaattaaaaatatatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtgaatttagttaagaaccatacg 32318755  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||| ||| ||||||||||||||||||||    
T  32318754 aaaagcacataaggaattgtacctaagttttct 32318722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 55107561 - 55107693
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||| |||||||||||||||  | |||||||| || || |||||     
T  55107561 tatggttcttaactaaaaatacatattatttggatataacaaactttgagaaaattatgcatttgaggaaatcatggtaaatttagtaaagaaccataca 55107660  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| ||||||||||||||||||||    
T  55107661 aaaagcacctaaggaattgtacctaagttttct 55107693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 4688388 - 4688249
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| ||||||||||||| |||||||||||||||||| |||||||| |||||| ||||||||| || |||||||||||||| | ||||||||||||| ||    
T  4688388 ttttcgtatggttcttaattaaaaatacatatttttttggatataacaaactttgagaaaattgtgaatttgaggaaatcacagtgaatttagttaagaa 4688289  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  4688288 ccatacgaaaagcacctaagaaattgtacctaagttttct 4688249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 28809988 - 28809848
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatg-aatttagttaaaa 106  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||  || |||||||||||||    
T  28809988 cttttggtatggttcttaactagaaatacatattttttggatataacaaattttgagaaaattatggatttgagaaaatcatggtgaaatttagttaaaa 28809889  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |  |||| ||||||||||||  |||||||||||||||||||    
T  28809888 acaataccaaaagcacctaagaaattgtacctaagttttct 28809848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 35360707 - 35360844
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||| ||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| ||     
T  35360707 ttttcgtatggttcttaactaaaaatacatattttttagatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaac 35360806  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| || ||||  ||||||| |||||||||||    
T  35360807 catacgaaaaacaactaaaaaattgta-ctaagttttct 35360844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 23928702 - 23928570
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||| |||||||||||||||| || |||||||||||||| ||| || ||||||||||||||||||||||||||||  ||||||||||||| || |||||    
T  23928702 gtatgattcttaactaaaaatatattttttttggatataacaaattttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaatcatac 23928603  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||| || |||| ||||||||||||||||||||    
T  23928602 gaaaaaca-ctaaggaattgtacctaagttttct 23928570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 3422569 - 3422431
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||| ||||||||||||| || |||||  |||| ||||||||| |||||||||||||||||||| |||||||| | |||||| |||| ||     
T  3422569 ttttcgtatggtttttaactaaaaatatatctttttacgatacaataaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaac 3422470  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||  |||||||||||||||||||    
T  3422469 tatacgaaaagcacctaagaaattgtacctaagttttct 3422431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 41 - 152
Target Start/End: Complemental strand, 55049508 - 55049397
Alignment:
Q  41 tttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaa 140  Q
    ||||||||||||| |||||| || |||||||||| ||||||||||||||| ||||||||||||| ||  ||||||||||||||||| ||||||||| |||    
T  55049508 tttttggatataacaaactttgaaaaaattatgggtttgaggaaatcatagtgaatttagttaagaactatacgaaaagcacctaaggaattgtacataa 55049409  T
Q  141 gttttcttcaaa 152  Q
    ||||||| ||||    
T  55049408 gttttctccaaa 55049397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 4895003 - 4895113
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa-aaa 107  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||  | ||||||||||| |||    
T  4895003 tttttgtatagttcttaactaaaaatacatattttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaagaaa 4895102  T
Q  108 acatacgaaaa 118  Q
     ||||||||||    
T  4895103 ccatacgaaaa 4895113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 52824269 - 52824347
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaat 86  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  52824269 cttttcgtatggttcttaactaaaaatacatattttttagatataataaactttgagaaaattatggatttgaggaaat 52824347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 137
Target Start/End: Original strand, 2272397 - 2272525
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||| |||||||||||||||||| ||||  ||||||||||| || |||||| || |||||||||||||| ||||||||||  ||||||||| ||| ||    
T  2272397 ctttttatatggttcttaactaaaa-tacaatttttttggatagaacaaactttgataaaattatggatttaaggaaatcatggtgaatttagctaagaa 2272495  T
Q  108 acatacgaaaagcacctaatgaattgtacc 137  Q
     |||||||||||||| ||||||||||||||    
T  2272496 ccatacgaaaagcacataatgaattgtacc 2272525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 24294497 - 24294636
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||| ||||||| |||||||||||||||||| ||||||| |||||| |||||||||| | |||||||||||| ||  ||||||||||||| ||    
T  24294497 cttttcgtatgattcttaattaaaaatacatatttttttgatataacaaactttgagaaaattacgaatttgaggaaattatggtgaatttagttaagaa 24294596  T
Q  108 acatacgaaa---agcacctaatgaattgtacctaagttt 144  Q
     |||||||||   | ||||||| |||||||||||||||||    
T  24294597 ccatacgaaaaacaccacctaaggaattgtacctaagttt 24294636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 16995694 - 16995559
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||| |||||||| ||||||| |||||| ||||||| |||||  || ||||| |||| |||||| |||||||  |||||||| |||||||     
T  16995694 ttttcgtatggtttttaactaacaatacatcttttttagatataacaaactctgaaaaaatgatgggtttgagaaaatcatgttgaatttaattaaaaac 16995595  T
Q  109 catacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||| |||| || ||||||||||||||||||    
T  16995594 catacgaaaaacacc-aaggaattgtacctaagtttt 16995559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 8 - 122
Target Start/End: Original strand, 56552091 - 56552205
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||| |||||||||||||  ||  |||| ||||| |||||| ||||||||||||||||||||||||||||  | |||||| |||| ||    
T  56552091 ctttttgtatggttctcaactaaaaatacactttccttggttataacaaactttgagaaaattatggatttgaggaaatcatggttaatttatttaagaa 56552190  T
Q  108 acatacgaaaagcac 122  Q
     ||||||| ||||||    
T  56552191 ccatacgataagcac 56552205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 9355640 - 9355557
Alignment:
Q  62 gagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||||||||||| ||||||||||  ||||||||||||| || |||| ||||||||||||| |||||||||  |||||||    
T  9355640 gagaaaattatggatttaaggaaatcatggtgaatttagttaagaaccatatgaaaagcacctaaggaattgtacggaagtttt 9355557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 32 - 149
Target Start/End: Complemental strand, 36031048 - 36030939
Alignment:
Q  32 aatacatattttttgg-atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaa 130  Q
    ||||||||||||||   |||||| |||||| |||||||||||||||||||||         ||||||||||||| ||||||||||||||||| ||| |||    
T  36031048 aatacatatttttttttatataacaaactttgagaaaattatggatttgagg---------tgaatttagttaagaaacatacgaaaagcacgtaaggaa 36030958  T
Q  131 ttgtacctaagttttcttc 149  Q
    |||||||||| ||||||||    
T  36030957 ttgtacctaacttttcttc 36030939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 37525061 - 37525117
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || || ||||||||||||||| |||||||||||||||||||||||||    
T  37525061 tttagttaagaaccacacgaaaagcacctaaagaattgtacctaagttttcttcaaa 37525117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 530787 - 530838
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  530787 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 530838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 18417710 - 18417659
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  18417710 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 18417659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 20435258 - 20435309
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  20435258 tttagttaagaaccatacgaaaagcacctaaagaattgtacctaagttttct 20435309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 43486273 - 43486202
Alignment:
Q  76 tttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| |||||||  ||||||||||||| || |||| |||||| |||||| ||||||||||||||||||||    
T  43486273 tttgagaaaatcatggtgaatttagttaagaaccataggaaaagtacctaaggaattgtacctaagttttct 43486202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 52587454 - 52587382
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgagg 82  Q
    ||||| |||||||||||||||||| |||  || ||||| ||||||| |||||| |||||||||||||||||||||    
T  52587454 cttttcgtatggttcttaactaaatata--taattttttgatataacaaactttgagaaaattatggatttgagg 52587382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 52824292 - 52824241
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  52824292 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 52824241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 678 - 763
Target Start/End: Original strand, 3275773 - 3275858
Alignment:
Q  678 ctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatc 763  Q
    ||||| || |||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||   || || ||||||||||||||    
T  3275773 ctccatgtaacaaggttacctcctacaaaggtgaagtaacctgaagtagatcttctatcatctatagatccagcccaatcggcatc 3275858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 3422547 - 3422596
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  3422547 tttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 3422596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 678 - 763
Target Start/End: Complemental strand, 28600979 - 28600894
Alignment:
Q  678 ctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatc 763  Q
    ||||| || |||||||| ||||||||||| ||||| || ||||| ||||||||||||||||||   || || ||||||||||||||    
T  28600979 ctccatgtaacaaggttacctcctacaaaggtgaagtaacctgaagtagatcttctatcatctatagatccagcccaatcggcatc 28600894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 47465102 - 47465151
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||||||||    
T  47465102 tttagttaaaaatcatatgaaaagcacctaaagaattgtacctaagtttt 47465151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 1298965 - 1298914
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  1298965 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 1298914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 4552838 - 4552787
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| |||| ||||||||| ||| ||||||||||||||||||||    
T  4552838 tttagttaaaaaccatatgaaaagcacttaaggaattgtacctaagttttct 4552787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 19601079 - 19600944
Alignment:
Q  10 ttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaac 109  Q
    ||||||||| ||||||| |||||||||| |||||||  | |||| |||||| || || ||||||||||| |  |||||||   ||||||| ||||||| |    
T  19601079 ttttgtatgattcttaattaaaaatacacattttttttaaataacaaactttgaaaatattatggatttaacaaaatcatggcgaatttaattaaaaacc 19600980  T
Q  110 atacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||  ||||  |||||| |||||||| |||| ||||    
T  19600979 atataaaaattacctaaagaattgtatctaaatttt 19600944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 24969662 - 24969713
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| ||  ||||||||||||||||| ||||||||||||||||||||    
T  24969662 tttagttaagaactatacgaaaagcacctaaggaattgtacctaagttttct 24969713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 42274611 - 42274662
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  42274611 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 42274662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 98
Target Start/End: Original strand, 19591252 - 19591341
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaattt 98  Q
    |||||||||  ||||||||||||||||||| |   ||| |||||||||| || |||||| |||| |||||||  ||| ||||||||||||    
T  19591252 tttttgtattattcttaactaaaaatacatctagattgcatataataaattttgagaaagttatagatttgaataaagcataatgaattt 19591341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 118
Target Start/End: Complemental strand, 1051296 - 1051203
Alignment:
Q  23 ttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaa 118  Q
    |||||||||||||  ||| |||||||||| | ||||||  ||||||||||  |||||| ||||||||||| |||||| |||| ||  |||||||||    
T  1051296 ttaactaaaaata--tatcttttggatattacaaactttaagaaaattataaatttgaagaaatcataataaatttaattaagaattatacgaaaa 1051203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 23482054 - 23481966
Alignment:
Q  16 atggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||||||||||||||| |||||| ||||||  |||||| ||| || ||||||||||| ||||| |  | |||||||| |||||| ||||    
T  23482054 atggttcttaactaaatatacatcttttttatatataacaaattttgagaaaattatagatttaaaaacatcataataaatttaattaa 23481966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 23928685 - 23928736
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||| ||||||||||| ||||||||| ||||||||||    
T  23928685 tttagttaagaatcatacgcaaagcacctaaggaattgtacataagttttct 23928736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 55107577 - 55107526
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||| ||||||||| ||| ||||||||||||||||||||    
T  55107577 tttagttaagaaccatatgaaaagcacataaggaattgtacctaagttttct 55107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 36
Target Start/End: Complemental strand, 42020232 - 42020203
Alignment:
Q  7 actttttgtatggttcttaactaaaaatac 36  Q
    ||||||||||||||||||||||||||||||    
T  42020232 actttttgtatggttcttaactaaaaatac 42020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 127
Target Start/End: Original strand, 42906862 - 42906927
Alignment:
Q  62 gagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaat 127  Q
    ||||||| | ||||||||| ||||||||||  ||||||||||  || |||| ||||||||||||||    
T  42906862 gagaaaactgtggatttgaagaaatcataagtaatttagttaggaaccataggaaaagcacctaat 42906927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 120
Target Start/End: Complemental strand, 47465110 - 47465014
Alignment:
Q  23 ttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagc 120  Q
    ||||||||||||| || || ||| || |||| ||||||  | ||||||||| |||| || ||||||  |||||||||||||||||  |||||||||||    
T  47465110 ttaactaaaaatatatcttgtttagagataacaaactttaaaaaaattatgaatttaag-aaatcacgatgaatttagttaaaaattatacgaaaagc 47465014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 7e-55; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 7e-55
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 12838107 - 12838248
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||||||    
T  12838107 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaaaa 12838206  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttcttc 149  Q
     |||||||||| ||||||| ||||||||| ||||||||||||    
T  12838207 ccatacgaaaaacacctaaagaattgtacataagttttcttc 12838248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21969298 - 21969159
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| ||    
T  21969298 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 21969199  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  21969198 ccatacgaaaagcacctaaggaattgtacctaagttttct 21969159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21991734 - 21991595
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| ||    
T  21991734 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaagaa 21991635  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  21991634 ccatacgaaaagcacctaaggaattgtacctaagttttct 21991595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 2e-49
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 3970633 - 3970493
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| |    
T  3970633 acttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 3970534  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| |||||| |||||||||||||    
T  3970533 accatacgaaaagcacctaaggaattgcacctaagttttct 3970493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 45487829 - 45487968
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||||  ||||||||||||| ||    
T  45487829 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 45487928  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  45487929 ccatacgaaaagcacctaaggaattgtacctaagttttct 45487968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 13078305 - 13078165
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||  ||||||||||||| |    
T  13078305 acttttcgtatgattcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcatggtgaatttagttaaga 13078206  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| |||||| |||||||||||||    
T  13078205 accatacgaaaagcacctaaggaattgcacctaagttttct 13078165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 22101194 - 22101334
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  22101194 cttttcgtatggttcttaactaaaaatacatattttgttggatataacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 22101293  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||| | ||| ||||||||||||||||||||    
T  22101294 accatacgaaaagctcataaggaattgtacctaagttttct 22101334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 26906484 - 26906623
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  26906484 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 26906583  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||| | |||| ||||||||||||||||||||    
T  26906584 ccatacgaaaagtatctaaggaattgtacctaagttttct 26906623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 36278897 - 36278758
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  36278897 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 36278798  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||| | |||| ||||||||||||||||||||    
T  36278797 ccatacgaaaagtatctaaggaattgtacctaagttttct 36278758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 22176138 - 22176278
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||| |    
T  22176138 cttttcgtatggttcttaactaaaaatacatattttgttggatattacaaactttgagaaaattatggatttgaggaaatcatagtgaatttagttaaga 22176237  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||| |||||||| ||| ||||||||||||||||||||    
T  22176238 accatacaaaaagcacataaggaattgtacctaagttttct 22176278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 9e-45
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 25446279 - 25446418
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| |    
T  25446279 cttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 25446378  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| |||||||| |||||||||||    
T  25446379 accatacgaaaagcacctaaggaattgta-ctaagttttct 25446418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 4072414 - 4072275
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||||| ||    
T  4072414 ttttcgtatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagttaagaa 4072315  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  4072314 ccatacgaaaagcacctaagaaattgtacctaagttttct 4072275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 25488482 - 25488343
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||  ||||||||||||| ||    
T  25488482 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaa 25488383  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
      ||||||||||||||||| ||||||||| |||| |||||    
T  25488382 ctatacgaaaagcacctaaggaattgtacttaagatttct 25488343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 25561041 - 25561180
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||| ||||||||  ||||||||||||| ||    
T  25561041 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatatgaagaaatcatggtgaatttagttaagaa 25561140  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
      ||||||||||||||||| ||||||||| |||| |||||    
T  25561141 ctatacgaaaagcacctaaggaattgtacttaagatttct 25561180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 36657574 - 36657435
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  36657574 cttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 36657475  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  36657474 ccatacgaaaagcatctaaggaattgtacctaagttttct 36657435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 10254605 - 10254738
Alignment:
Q  15 tatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| || ||||||||||||||||| ||||||| |||||||||||||| || |||||    
T  10254605 tatggttcttaactaaaaatacatatttttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaatttagttaagaaccatac 10254704  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| ||||||||||||| ||||||    
T  10254705 gaaaagcacctaaggaattgtacctaaattttct 10254738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 8831770 - 8831910
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||| ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| ||||||||  ||||||||||||| |    
T  8831770 cttttcgtatggttctaaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttagttaaga 8831869  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||||||||||||||||  |||||||||||||||||||    
T  8831870 accatacgaaaagcacctaaaaaattgtacctaagttttct 8831910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 10441399 - 10441260
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  10441399 cttttggtacggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 10441300  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||| |||||||||||| ||||||||| ||||||||||    
T  10441299 tcataccaaaagcacctaaggaattgtacttaagttttct 10441260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 32237535 - 32237396
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| |||| |||||||  | ||||||||||| ||    
T  32237535 cttttcgtatggttcttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatctgagaaaatcatggtaaatttagttaagaa 32237436  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||| ||||||| ||||||||||||||||||||    
T  32237435 ccatacgaaaaacacctaaggaattgtacctaagttttct 32237396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 36822901 - 36822762
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||  |   ||||||||| ||    
T  36822901 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatctgaggaaatcatggtatttttagttaagaa 36822802  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  36822801 ccatacgaaaagcagctaaggaattgtacctaagttttct 36822762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 45713044 - 45712905
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||| ||||||||||||||  ||||||||||||| ||    
T  45713044 cttttcgtatggttctaaactaaaaatacatattttttggatataacaaactttgataaaattatggctttgaggaaatcatggtgaatttagttaagaa 45712945  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | | |  |||||||||||| ||||||||||||||||||||    
T  45712944 aaaaaaaaaaagcacctaaggaattgtacctaagttttct 45712905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 12789637 - 12789775
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||| |||||||||||||||  |||||||| |||| ||     
T  12789637 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatgaatttgaggaaatcatggtgaatttaattaagaac 12789736  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||| |||||||||||| ||||| |||| |||||||||    
T  12789737 catacaaaaagcacctaaggaattctaccaaagttttct 12789775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 50099462 - 50099603
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt--ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    ||||| |||||||| |||| ||||||||||||||||  |||||||||| |||||| |||||||||||| |||||||||||| ||  |||||||||||||     
T  50099462 cttttcgtatggtttttaattaaaaatacatattttttttggatataacaaactttgagaaaattatgaatttgaggaaattatggtgaatttagttaag 50099561  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    || |||||||||||||||||| ||||||||||||||||||||    
T  50099562 aaccatacgaaaagcacctaaggaattgtacctaagttttct 50099603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 10117552 - 10117680
Alignment:
Q  15 tatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| ||||     ||||||||||||| || |||||    
T  10117552 tatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaat-----tgaatttagttaagaaccatac 10117646  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||| ||||||||||||| ||||||    
T  10117647 gaaaagcacctaaggaattgtacctaaattttct 10117680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 43150510 - 43150619
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||| ||||||||||||| ||    
T  43150510 cttttcgtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatagtgaatttagttaagaa 43150609  T
Q  108 acatacgaaa 117  Q
     |||||||||    
T  43150610 tcatacgaaa 43150619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 10017151 - 10017278
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||| ||||||| ||||||| ||     || ||||||    
T  10017151 tatggttcttaactaaaaatacatattttttggatataacaaactttgaaaaaattatggatttgagaaaatcatgatgaattaag-----aaccatacg 10017245  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| ||||||||||||| ||||||    
T  10017246 aaaagcacctaaggaattgtacctaaattttct 10017278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 43639223 - 43639083
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| |||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||||||||| ||||||||  ||||||| ||||| |    
T  43639223 cttttcgtatgattcttaactaaaaatatatatttttttggatataacaaactttgagaaaattatggatttgaagaaatcatggtgaatttggttaaga 43639124  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||| || |||||||||||    
T  43639123 atcatacgaaaagcacctaaggaattataactaagttttct 43639083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 26977721 - 26977859
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||| |||||||||||||||| |||||  |||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||     
T  26977721 ttttcgtatggtttttaactaaaaatacatctttttatgatacaataaactttgagaaaattatggatttgaggaaatcatactaaatttagttaagaac 26977820  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||| |||||| | ||||  |||||||||||||||||||    
T  26977821 catatgaaaagtatctaagaaattgtacctaagttttct 26977859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 15 - 147
Target Start/End: Complemental strand, 55340428 - 55340295
Alignment:
Q  15 tatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||| |||||||  ||||| ||||||| || |||||    
T  55340428 tatggttcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatatagttaagaatcatac 55340329  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||| ||| |||  |||||||||||| ||||||    
T  55340328 gaaaaacacataagaaattgtacctaaattttct 55340295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 39850486 - 39850346
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaactt-cgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| |||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||  |   ||||||||| |    
T  39850486 cttttcgtatgattcttaactaaaaatatatattttttggatataacaaacttgtgagaaaattatggatttgaggaaatcatggtatttttagttaaga 39850387  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||| ||||||| |||| |||||||||||||||    
T  39850386 accatacgaaaaacacctaaggaatagtacctaagttttct 39850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 26976982 - 26976844
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||| ||||||||||||| || |||||  |||| ||||||||| |||||||||||||||||||| |||||||| | |||||| |||| ||     
T  26976982 ttttcgtatggtttttaactaaaaatatatctttttacgatacaataaactttgagaaaattatggatttgagaaaatcatactaaatttaattaagaac 26976883  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||  |||||||||||||||||||    
T  26976882 tatacgaaaagcacctaagaaattgtacctaagttttct 26976844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 44611521 - 44611384
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||| |||||| |||||||||||| |||||| ||||||||  ||||||||||||| ||     
T  44611521 tttttgtatggtttttaactaaaaatatatatttttttgatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttagttaagaac 44611422  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| ||||| |||||| |||||||| |||||||||||    
T  44611421 tatacaaaaagtacctaaggaattgta-ctaagttttct 44611384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 9 - 149
Target Start/End: Complemental strand, 44920786 - 44920647
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||| |||||||  | ||||||||||| ||     
T  44920786 tttttttatagttcttaactaaaaatacatattttttggatataataaactttgagaaaattataaatttgagaaaatcattgtaaatttagttaagaac 44920687  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttcttc 149  Q
    |||| |||||||| |||| ||||||||  ||| ||||||||    
T  44920686 cataagaaaagca-ctaaggaattgtatttaaattttcttc 44920647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 150
Target Start/End: Original strand, 404074 - 404216
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| || ||||||||||||| ||||||| |||||||||| |||||| ||||||||||| || |||||||||||||  ||||||||||||| |    
T  404074 cttttcgtatgatttttaactaaaaataaatatttttttggatataacaaactttgagaaaattatagacttgaggaaatcatggtgaatttagttaaga 404173  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttcttca 150  Q
    | |||||| |||||| |||| |||||||| ||||||||||||||    
T  404174 accatacggaaagcatctaaagaattgta-ctaagttttcttca 404216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 40 - 147
Target Start/End: Original strand, 35368795 - 35368902
Alignment:
Q  40 ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtaccta 139  Q
    |||||||||||||| |||||| |||||||||||||||||||| |||||||  |||||||||||||||| |||||||||| ||| |||  |||||||||||    
T  35368795 ttttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaaaaaccatacgaaaaacacataagaaattgtaccta 35368894  T
Q  140 agttttct 147  Q
    ||||||||    
T  35368895 agttttct 35368902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 9 - 144
Target Start/End: Original strand, 46664207 - 46664342
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||| |||||||||||||||||||||||||||  |||||| |||||| |||||||||||| |||||||||||| || ||   |||  |||||||     
T  46664207 ttttcgtatagttcttaactaaaaatacatatttttttaatataacaaactttgagaaaattatgaatttgaggaaattatgatattttttattaaaaat 46664306  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttt 144  Q
    |||||||||||||||||| ||||||||| |||||||    
T  46664307 catacgaaaagcacctaaagaattgtacataagttt 46664342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 1476685 - 1476555
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||||||||||||||||||||||  |||||| || |||| |||||| |||| |||||||||||| ||||||||||  ||||||||| | | || |||||     
T  1476685 tatggttcttaactaaaaatacaatttttttagagataacaaactttgagagaattatggatttaaggaaatcatggtgaatttaggttagaaccatacc 1476586  T
Q  115 aaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||||| ||||||||||||||||||    
T  1476585 aaaagcacctaaggaattgtacctaagtttt 1476555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 23 - 147
Target Start/End: Complemental strand, 13724114 - 13723990
Alignment:
Q  23 ttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagca 121  Q
    ||||||||||||||||||||||| |||||||| |||||| |||||||||||| |||||| ||||||||  ||||||||| ||| || ||||| |||||||    
T  13724114 ttaactaaaaatacatatttttttggatataacaaactttgagaaaattatgaatttgaagaaatcatggtgaatttag-taagaaccatacaaaaagca 13724016  T
Q  122 cctaatgaattgtacctaagttttct 147  Q
    |||||  |||||||||||||||||||    
T  13724015 cctaagaaattgtacctaagttttct 13723990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 36329321 - 36329245
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaa 84  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  36329321 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaa 36329245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 372 - 535
Target Start/End: Complemental strand, 8018577 - 8018414
Alignment:
Q  372 ttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaa 471  Q
    ||||| ||||||||||| | |||||| || ||| |||||||||||||  ||||  | ||||| ||||  || ||  |||||||||| ||||||||||| |    
T  8018577 ttagtaagcatatcagcaagttgttgttctgattttacaaacggaaattcaataataccagcttcaatcttttctctgatgaaatgcctatcaatttcca 8018478  T
Q  472 catgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcaca 535  Q
    | |||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||| |||||    
T  8018477 cgtgttttgtgcgatcatgttggacagggttatgagcaatctctatggcagatttattgtcaca 8018414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 42105523 - 42105387
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||||||||||||||||||||||||||||  |||||| || |||| |||||| |||| |||||||||||| || ||||||   ||||||||||||| ||     
T  42105523 tttttgtatggttcttaactaaaaatacaatttttttagagataacaaactttgagagaattatggatttaagaaaatcacggtgaatttagttaagaac 42105424  T
Q  109 catacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||| |||||| |||||   |||||||||||||||||    
T  42105423 cataagaaaagtacctatgaaattgtacctaagtttt 42105387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 5529921 - 5530059
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacata-ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||  |||||| ||||||||||| ||||| | ||||||||  |   ||||||||| |    
T  5529921 cttttcgtatggttcttaactaaaaatacatatttttttggatatatcaaactttgagaaaattatagatttaaagaaatcatggtatttttagttaata 5530020  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    | |||||||||||||| |||  |||||||||||| ||||    
T  5530021 accatacgaaaagcacttaagaaattgtacctaaatttt 5530059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 15 - 119
Target Start/End: Original strand, 37536907 - 37537011
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    ||||||||||| |||||| |||||||||||| | ||||| |||||| |||||||||||||||| |||||||| ||||  ||||||||||| || |||||     
T  37536907 tatggttcttatctaaaattacatatttttttgttataacaaactttgagaaaattatggattagaggaaattataaataatttagttaagaaccataca 37537006  T
Q  115 aaaag 119  Q
    |||||    
T  37537007 aaaag 37537011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 15 - 145
Target Start/End: Complemental strand, 297669 - 297541
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||| ||||||||||||||  |||| |||||| |||||| |||||  ||||||||||||||||| || ||||  || | ||||||| ||| || ||||||    
T  297669 tatgattcttaactaaaaa--cataatttttgaatataacaaactatgagaaaattatggatttcagaaaattgtagtaaatttagctaagaaccatacg 297572  T
Q  115 aaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || ||||||||||||||||||    
T  297571 aaaagcaccaaaggaattgtacctaagtttt 297541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 8 - 104
Target Start/End: Complemental strand, 157110 - 157013
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttgg-atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||| |||| ||||||| |||||||||||||||||||   |||||| |||||| ||||||||||||||||||||||||| || || |||||||||||    
T  157110 cttttggtatagttcttagctaaaaatacatatttttttttatataacaaactttgagaaaattatggatttgaggaaattatgataaatttagttaa 157013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 38125319 - 38125250
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggattt 78  Q
    |||| ||||||||||||||||||||||||||||||||| |||||| ||||||  ||||||||||||||||    
T  38125319 ttttcgtatggttcttaactaaaaatacatattttttgtatataacaaactttaagaaaattatggattt 38125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 37506258 - 37506130
Alignment:
Q  17 tggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaa 116  Q
    |||||||||||||||||||||| ||||||||| |||| |||||| |||||||||||| |||| || |||||||  | ||||||||||| || ||||  ||    
T  37506258 tggttcttaactaaaaatacattttttttggagataacaaactttgagaaaattatgaatttaagaaaatcat-gtaaatttagttaagaaccatagaaa 37506160  T
Q  117 aagcacctaatgaattgtacctaagttttc 146  Q
    || ||| ||| || ||| || |||||||||    
T  37506159 aaacacttaaggagttgcacttaagttttc 37506130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 96 - 150
Target Start/End: Original strand, 43639200 - 43639254
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttca 150  Q
    ||||||||| || |||||||||||||||||| |||||||||||||||||||||||    
T  43639200 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttcttca 43639254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 145
Target Start/End: Complemental strand, 46222153 - 46222032
Alignment:
Q  23 ttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcac 122  Q
    ||||||||||| |||  |||||||| ||||  |||||  |||||||||||| |||| || |||||||  |||||||||||||||| |||||||||| |||    
T  46222153 ttaactaaaaacacaccttttttggttatac-aaactaagagaaaattatgaatttaagaaaatcatggtgaatttagttaaaaaccatacgaaaaacac 46222055  T
Q  123 ctaatgaattgtacctaagtttt 145  Q
    ||||  ||||||| ||| |||||    
T  46222054 ctaagaaattgtaactaggtttt 46222032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 45 - 147
Target Start/End: Original strand, 46679328 - 46679430
Alignment:
Q  45 tggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttt 144  Q
    ||||| ||| |||||| ||||||||||||||||||||||||| ||  ||||||||||||| || | ||  ||||||| | || ||||||||| |||||||    
T  46679328 tggatttaacaaactttgagaaaattatggatttgaggaaattatggtgaatttagttaagaaccgtataaaaagcatccaaggaattgtacttaagttt 46679427  T
Q  145 tct 147  Q
    |||    
T  46679428 tct 46679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 48 - 145
Target Start/End: Original strand, 49984001 - 49984098
Alignment:
Q  48 atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||| || || |||||||||||||| || |||||||  ||||||||||||| || | ||||||||| ||||||  |||| ||||||||||||    
T  49984001 atataataaattttgaaaaaattatggatttaagaaaatcatggtgaatttagttaagaatcgtacgaaaagtacctaaaaaattatacctaagtttt 49984098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 21969275 - 21969326
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  21969275 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 21969326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 21991711 - 21991762
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  21991711 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 21991762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 38125297 - 38125348
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  38125297 tttagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 38125348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 39850463 - 39850514
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  39850463 tttagttaagaatcatacgaaaagcacctaaggaattgtacctaagttttct 39850514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 45487852 - 45487801
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  45487852 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 45487801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 26976960 - 26977009
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    |||||||||||| |||||||||| ||||||| ||||||||||||||||||    
T  26976960 tttagttaaaaaccatacgaaaaacacctaaagaattgtacctaagtttt 26977009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 404097 - 404046
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| ||||||||||||||||||  |||||||| ||||||||||    
T  404097 tttagttaaaaatcatacgaaaagcacctaagaaattgtacgtaagttttct 404046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 4072392 - 4072443
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  4072392 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 4072443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 5529944 - 5529893
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  5529944 tttagttaagaaccatacgaaaagcacctaagaaattgtacctaagttttct 5529893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 10017167 - 10017116
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||||||||    
T  10017167 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttct 10017116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 10254621 - 10254570
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||||||||    
T  10254621 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagttttct 10254570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 12789659 - 12789608
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||||||||||    
T  12789659 tttagttaagaaccatacgaaaaacacctaaggaattgtacctaagttttct 12789608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 25488459 - 25488510
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  25488459 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 25488510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 25561064 - 25561013
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  25561064 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 25561013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 26906507 - 26906456
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  26906507 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 26906456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 32237512 - 32237563
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||| |||| || |||||||||||||||||| ||||||||||||||||||||    
T  32237512 tttaattaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 32237563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 35368602 - 35368551
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||| ||| ||||||||||||||||||||    
T  35368602 tttagttaagaaccatacgaaaagcacataaggaattgtacctaagttttct 35368551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 36278874 - 36278925
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  36278874 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 36278925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 36657551 - 36657602
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  36657551 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 36657602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 36822878 - 36822929
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  36822878 tttagttaagaaccatacgaaaagcacctaaaaaattgtacctaagttttct 36822929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 43150533 - 43150482
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| |||||||||||||||| | |||||| |||||||||||||    
T  43150533 tttagttaaaaaccatacgaaaagcacctgaggaattgcacctaagttttct 43150482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 146
Target Start/End: Original strand, 45713021 - 45713071
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttc 146  Q
    ||||||| | || |||||||||||||||||| |||||||||||||||||||    
T  45713021 tttagtttagaaccatacgaaaagcacctaaggaattgtacctaagttttc 45713071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 1476669 - 1476718
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || |||| ||||||||||||| ||||||||||||||||||    
T  1476669 tttagttaagaaccatatgaaaagcacctaaggaattgtacctaagtttt 1476718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 8831793 - 8831744
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||| | || |||||||||||||||||| ||||||||||||||||||    
T  8831793 tttagtttagaaccatacgaaaagcacctaaggaattgtacctaagtttt 8831744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 96 - 149
Target Start/End: Complemental strand, 12838130 - 12838077
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttc 149  Q
    ||||||||| || ||||| |||||||||||| ||||||||| ||||||||||||    
T  12838130 tttagttaagaaccatacaaaaagcacctaaggaattgtacataagttttcttc 12838077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 13078281 - 13078337
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || ||||||||||| ||||||  ||||||||||||||||||| ||||    
T  13078281 tttagttaagaatcatacgaaaagtacctaagaaattgtacctaagttttctccaaa 13078337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 3970609 - 3970660
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| ||||||  |||||||||||||||||||    
T  3970609 tttagttaagaaccatacgaaaagtacctaagaaattgtacctaagttttct 3970660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 10117568 - 10117517
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||| ||||||||||||| ||| ||||||||||||||||    
T  10117568 tttagttaagaaccatatgaaaagcacctaaggaactgtacctaagttttct 10117517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 10441376 - 10441427
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || | ||| |||||||||||| ||||||||||||||||||||    
T  10441376 tttagttaagaaccgtaccaaaagcacctaaggaattgtacctaagttttct 10441427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 24435620 - 24435683
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattat 72  Q
    |||||||||||||||||||| |||||| |||||||||   | | |||||||| |||||||||||    
T  24435620 tttttgtatggttcttaacttaaaatatatattttttatttgtgataaactttgagaaaattat 24435683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 142
Target Start/End: Original strand, 44611499 - 44611545
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagt 142  Q
    |||||||||||| ||||| |||| ||||||| |||||||||||||||    
T  44611499 tttagttaaaaaccatacaaaaaacacctaaggaattgtacctaagt 44611545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 1e-53; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 1e-53
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 885415 - 885554
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| |||||||||||||| ||    
T  885415 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatgatgaatttagttaagaa 885514  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| ||||||||||||| ||||||||||||||||||||    
T  885515 tcataggaaaagcacctaaggaattgtacctaagttttct 885554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 15546663 - 15546801
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  | |||||| |||| ||     
T  15546663 tttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtaaatttaattaagaac 15546762  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  15546763 catacgaaaagcacctaaggaattgtacctaagttttct 15546801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 21380082 - 21379943
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||| |||||||||||||||  ||||||||||||| ||    
T  21380082 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaacattgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaa 21379983  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  21379982 ccatacgaaaagcacctaaggaattgtacctaagttttct 21379943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 8091092 - 8091231
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||   ||||||||||||| ||    
T  8091092 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaagaa 8091191  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||||||||  |||||||||||||||||||    
T  8091192 ccatacgaaaagcacctaagcaattgtacctaagttttct 8091231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 11687284 - 11687145
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  11687284 cttttcgtatggttcttaactaaaaatacatatttttttgatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 11687185  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  11687184 ccatacgaaaagcatctaaggaattgtacctaagttttct 11687145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 13172713 - 13172576
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| || |||||||||||||| ||     
T  13172713 ttttcgtatggttcttaagtaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatgat-atgaatttagttaagaac 13172615  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| || |||  ||||||||||||||||||||    
T  13172614 catacgaaaaacatctagagaattgtacctaagttttct 13172576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 3369015 - 3369147
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||| |||||||||||||||  ||||||||||||  ||    
T  3369015 cttttcgtatggttcttaactaaaaatacatattttttgaatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaggaa 3369114  T
Q  108 acatacgaaaagcacctaatgaattgtacctaa 140  Q
      ||||||||||||||||| |||||||||||||    
T  3369115 cgatacgaaaagcacctaacgaattgtacctaa 3369147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 14393591 - 14393733
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattt---tttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||| ||||| |||||||||||||||||||||||   ||||||||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||    
T  14393591 cttttcgtatgattcttaactaaaaatacatatttctttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaa 14393690  T
Q  105 aaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     || ||||| |||||||||||| ||||| ||||||||||||||    
T  14393691 gaaccatacaaaaagcacctaaggaattatacctaagttttct 14393733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 17 - 147
Target Start/End: Original strand, 7808648 - 7808778
Alignment:
Q  17 tggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaa 116  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||  |   ||||||||| || ||||||||    
T  7808648 tggtttttaactaaaaatacatattttttggatataacaaactttgagaaaattatagatttgaggaaatcatggtatttttagttaagaaccatacgaa 7808747  T
Q  117 aagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||| ||||||||||||||||||||    
T  7808748 aagcacctaaggaattgtacctaagttttct 7808778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 13439724 - 13439865
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatatttt-ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||     
T  13439724 acttttcgtatggttcttagctaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 13439823  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    || |||||||||| |||||    |||||||||||||||||||    
T  13439824 aaccatacgaaaaacacctgcgtaattgtacctaagttttct 13439865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 29609031 - 29609168
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| || |||||||||||||||||||||| ||||||||| |||| |||||| ||||||||||||||||| |||||||||   ||||||||||||||||    
T  29609031 cttttcgtgtggttcttaactaaaaatacatcttttttggagataacaaactttgagaaaattatggatttaaggaaatcacggtgaatttagttaaaaa 29609130  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
     ||||||||||||| |||| ||||||||| ||||||||    
T  29609131 ccatacgaaaagcatctaaggaattgtacgtaagtttt 29609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 9 - 145
Target Start/End: Original strand, 20501737 - 20501872
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||  |   ||||||||| ||     
T  20501737 ttttcgtatggttcttaactaaaaatacatattttttggatataacaaacttcgagaaaattatggatttgaagaaatcatggtatttttagttaagaac 20501836  T
Q  109 catacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||||||||||||  ||||||| |||||||||    
T  20501837 catacgaaaagcacctaagaaattgta-ctaagtttt 20501872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 4890622 - 4890482
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||||||||||||||||||  |||||||||| |||||||| |||||| |||||||||||| |||||||||||||||  | ||||||||||| |    
T  4890622 cttttcgtatggttcttaactaaaaacgcatatttttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtaaatttagttaaga 4890523  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||| |||||||  |||||||||||||||||||    
T  4890522 accatacgaaaaacacctaagaaattgtacctaagttttct 4890482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 18998258 - 18998119
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttg-gatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||||||||||| ||||||||||||||||||  ||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||| ||     
T  18998258 cttttcgtatggttcttaattaaaaatacatattttttttgatataacaaactttgagaaaattatggattcgaggaaatcatggtgaatttagtt-aag 18998160  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||| |||||||| ||||||| ||||||||||||||||||||    
T  18998159 aacgtacgaaaaacacctaaggaattgtacctaagttttct 18998119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 8 - 144
Target Start/End: Original strand, 4238882 - 4239020
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttt--ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||||||||||||||| || ||||||||||||||||  |||||||||| |||||| |||||||||| ||||||||| |||||||  |||||||| ||||     
T  4238882 ctttttgtatggttctcaattaaaaatacatattttttttggatataacaaactttgagaaaattaaggatttgagaaaatcatggtgaatttaattaag 4238981  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttt 144  Q
    || ||||| ||||||||  || |||||||||||||||||    
T  4238982 aaccatacaaaaagcacagaaggaattgtacctaagttt 4239020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 17279555 - 17279693
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatat---aataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    |||| ||||||||||||| ||||||||||||||||||| ||||   || |||||| || ||||||||| |||||| |||||||| ||||||||||||||     
T  17279555 ttttcgtatggttcttaattaaaaatacatattttttgaatataacaacaaactttgataaaattatgaatttgaagaaatcatgatgaatttagttaag 17279654  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||  |||||||   |||||||  |||||||||||||||||||    
T  17279655 aactatacgaa---cacctaagaaattgtacctaagttttct 17279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 7 - 118
Target Start/End: Complemental strand, 31764467 - 31764356
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| |||| ||||||||||||| |||||||||||||||||| || |||||| |||||||||||| ||||||| |||| ||  ||||||||||||| |    
T  31764467 acttttcgtatagttcttaactaaagatacatattttttggatacaacaaactttgagaaaattatgaatttgagaaaataatggtgaatttagttaaga 31764368  T
Q  107 aacatacgaaaa 118  Q
    | ||||| ||||    
T  31764367 accatacaaaaa 31764356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 6433751 - 6433805
Alignment:
Q  72 tggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaa 126  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||||||||||    
T  6433751 tggatttgaggaaatcatagtgaatttagttaagaaccatacgaaaagcacctaa 6433805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 21380059 - 21380110
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  21380059 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 21380110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 147
Target Start/End: Complemental strand, 6433748 - 6433692
Alignment:
Q  91 atgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||||| || ||||||||||||||||||  |||| ||||||||||||||    
T  6433748 atgaatttagttaagaaccatacgaaaagcacctaagaaattatacctaagttttct 6433692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Original strand, 11687261 - 11687317
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || ||||||||||||| |||| |||||||||||||||||||| ||||    
T  11687261 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttctccaaa 11687317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 30905018 - 30905110
Alignment:
Q  20 ttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacata 112  Q
    ||||||||||||| | || | |||||  |||||| |||||| ||||||||||| |||||||| | ||||  ||||||||||||||||| ||||    
T  30905018 ttcttaactaaaattgcacaatttttttatataaaaaactttgagaaaattatagatttgagtagatcacgatgaatttagttaaaaaccata 30905110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 885438 - 885387
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  885438 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 885387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 4890599 - 4890650
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||| ||||||    
T  4890599 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaaattttct 4890650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 7808662 - 7808611
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| || ||||||| ||||||| ||||||||||||||||||||    
T  7808662 tttagttaaaaaccaaacgaaaaacacctaaggaattgtacctaagttttct 7808611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 9 - 79
Target Start/End: Complemental strand, 4179166 - 4179097
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttg 79  Q
    |||| ||||||||||||||||||| ||||||||||||||  ||| ||||||  |||||||||||| |||||    
T  4179166 ttttcgtatggttcttaactaaaactacatattttttgg-catactaaactatgagaaaattatgaatttg 4179097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 17367158 - 17367066
Alignment:
Q  48 atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| |||||| |||||||||||| |||||| ||||||||        ||||||| || ||||||||||| || ||| ||||||||||||||||||||    
T  17367158 atataacaaactttgagaaaattatgaatttgatgaaatcatc-------tagttaagaatcatacgaaaagaacataaggaattgtacctaagttttct 17367066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 7 - 122
Target Start/End: Original strand, 7187593 - 7187706
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||| |||| |||||||||||| | |||||  | |||||||||||| ||||||| |||| ||||||| |||||||  |  |||||||||| |    
T  7187593 acttttcgtatgattctaaactaaaaatactttttttt--gttataataaactttgagaaaaatatgaatttgagtaaatcatggtttatttagttaata 7187690  T
Q  107 aacatacgaaaagcac 122  Q
    |  |||| ||||||||    
T  7187691 actatacaaaaagcac 7187706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 20501759 - 20501703
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || |||||||||| ||||||| |||||||| ||||||||||| ||||    
T  20501759 tttagttaagaaccatacgaaaaacacctaaggaattgtaactaagttttctccaaa 20501703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 3369038 - 3368987
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| |||||||||  |||||||||    
T  3369038 tttagttaagaaccatacgaaaagcacctaaggaattgtactcaagttttct 3368987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 8091115 - 8091064
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| |||||||| |||| ||||||    
T  8091115 tttagttaagaaccatacgaaaagcacctaaggaattgtatctaaattttct 8091064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 7441753 - 7441820
Alignment:
Q  11 tttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttga 80  Q
    |||||||||||||||||| |||||| | ||||||  | |||||||||||| |||||||| ||| ||||||    
T  7441753 tttgtatggttcttaactcaaaatatagattttt--gttataataaactttgagaaaatgatgaatttga 7441820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 96 - 145
Target Start/End: Complemental strand, 29609054 - 29609005
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    ||||||||| || || ||||||||||| ||| ||||||||||||||||||    
T  29609054 tttagttaagaaccacacgaaaagcacttaaagaattgtacctaagtttt 29609005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 107; Significance: 4e-53; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 8 - 153
Target Start/End: Original strand, 24836050 - 24836195
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| ||    
T  24836050 cttttcgtatggttctnaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaa 24836149  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttcttcaaac 153  Q
     |||||||||||||||||| |||||||||||||||||||| |||||    
T  24836150 ccatacgaaaagcacctaaggaattgtacctaagttttctccaaac 24836195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 3953184 - 3953044
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||  |||||||||||||||    
T  3953184 actttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaaa 3953085  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||||||||| || ||| ||||||||||||||||||||    
T  3953084 accatacgaaaagtacataaggaattgtacctaagttttct 3953044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 35339420 - 35339280
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||| |||||||| |||||||||||||| |    
T  35339420 acttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgagaaaattatggatttgaagaaatcatgatgaatttagttaaga 35339321  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  35339320 accatacgaaaagcacctaaggaattgtacctaagttttct 35339280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 4e-50
Query Start/End: Original strand, 8 - 145
Target Start/End: Complemental strand, 30259207 - 30259070
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| ||    
T  30259207 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 30259108  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
     |||| ||||||||||||| ||||||||||||||||||    
T  30259107 ccataggaaaagcacctaaggaattgtacctaagtttt 30259070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 6e-49
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 34052309 - 34052448
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||  ||||||||| ||| ||    
T  34052309 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagctaagaa 34052408  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||||||||||||| ||||||||||||||||||||    
T  34052409 ccatacgaaaagcacctaaggaattgtacctaagttttct 34052448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 4e-47
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 20184380 - 20184240
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| ||||| |||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| |    
T  20184380 cttttcgtatgattcttaactaaaaatacatatttttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaaga 20184281  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||||||||||||| ||||||||||||||||||||    
T  20184280 atcatacgaaaagcacctaaggaattgtacctaagttttct 20184240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 152
Target Start/End: Complemental strand, 31231757 - 31231611
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttgga--tataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaa 105  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||| |||||| ||||||||||||||||||||||||||||  |||||||||||||     
T  31231757 cttttcgtatggttcttaactaaaaatacatattttttggacatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaag 31231658  T
Q  106 aaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    || ||||| |||||||||||| |||||||||||||||||||| ||||    
T  31231657 aaccatacaaaaagcacctaaggaattgtacctaagttttctccaaa 31231611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 38883251 - 38883390
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||   ||||||||| ||    
T  38883251 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatgatatttttagttaagaa 38883350  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     ||||||||||||| |||| ||||||||||||||||||||    
T  38883351 ccatacgaaaagcatctaaggaattgtacctaagttttct 38883390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 14 - 147
Target Start/End: Complemental strand, 45997643 - 45997510
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||| || |||||    
T  45997643 gtatggttcttaactaaaaatacatattttttggatataataaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatac 45997544  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||||||| ||   |||||||||||||||||||    
T  45997543 aaaaagcacatatgaaattgtacctaagttttct 45997510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 19 - 146
Target Start/End: Original strand, 30594734 - 30594861
Alignment:
Q  19 gttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaa 118  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  30594734 gttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaatcatggtgaatttagttaagaaccatacgaaaa 30594833  T
Q  119 gcacctaatgaattgtacctaagttttc 146  Q
    ||| |||| |||||||||||||| ||||    
T  30594834 gcatctaaggaattgtacctaagctttc 30594861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 10936611 - 10936472
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||| ||||||||||| ||||  ||||||||||||| ||    
T  10936611 cttttcgtatggttcttaactaaaaatacatattttttggttataacaaactttgagaaaattatagatttgaggaagtcatggtgaatttagttaagaa 10936512  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     | |||||||||||||||| ||||||||| ||||||||||    
T  10936511 ccgtacgaaaagcacctaaggaattgtacataagttttct 10936472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 9285856 - 9285711
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||  |||||||||||||||  |||||||| |||| |    
T  9285856 acttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaaga 9285757  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    | ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  9285756 accatacaaaaagcaccaaatgaattgtacctaagttttctccaaa 9285711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 9289923 - 9289778
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||  |||||||||||||||  |||||||| |||| |    
T  9289923 acttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaaga 9289824  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    | ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  9289823 accatacaaaaagcaccaaatgaattgtacctaagttttctccaaa 9289778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 40358146 - 40358287
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||||||||||||||||||| |||||||||| ||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||||| ||     
T  40358146 ttttcgtatggttcttaactaaaaatgcatatttttttgatataacaaactttgagaaaattatgaatttgaggaaatcatggtgaatttagttaagaat 40358245  T
Q  109 catacgaaaagcaccta---atgaattgtacctaagttttct 147  Q
    |||| ||||||||||||   | ||||||||||||||||||||    
T  40358246 cataggaaaagcacctaaggaggaattgtacctaagttttct 40358287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 25742572 - 25742437
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    |||||||||||||| ||    
T  25742572 cttttcgtatggttgttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgaggaaat----atgaatttagttaagaa 25742477  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| ||||| |||||||  |||||||| ||||||||||    
T  25742476 ccataggaaaaacacctaagaaattgtacataagttttct 25742437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 37093799 - 37093937
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||| ||||||| |||||||| ||||||||||||||||| |||||| |||||||||||  |||||||||||||||  ||||||||||||||||     
T  37093799 ttttcgtatgattcttaattaaaaatatatattttttggatataacaaactttgagaaaattataaatttgaggaaatcatggtgaatttagttaaaaac 37093898  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||| ||||||  ||||||| |||| ||||||    
T  37093899 catacgaaaagtacctaagaaattgtatctaaattttct 37093937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 39617983 - 39617843
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt-ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    ||||| |||| ||||||||||||||||| ||||||||| |||||||| |||||| |||||||||||||||| |||||||||||  ||||||||||||| |    
T  39617983 cttttcgtatagttcttaactaaaaataaatatttttttggatataacaaactttgagaaaattatggattggaggaaatcatggtgaatttagttaaga 39617884  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | |||||||| | || ||||  |||||||||||||||||||    
T  39617883 accatacgaagaacatctaagaaattgtacctaagttttct 39617843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 48103399 - 48103534
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||| |||||||||||||||||||||||||||||||||| |||||| ||||  ||||||||||||||||||||   | |||||||||||| ||     
T  48103399 ttttcgtatgattcttaactaaaaatacatattttttggatataacaaactttgagattattatggatttgaggaaatc---acgaatttagttaagaac 48103495  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||| |||||||||||| ||||||||  ||||||||||    
T  48103496 catacaaaaagcacctaaagaattgtagataagttttct 48103534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 372 - 802
Target Start/End: Complemental strand, 4246151 - 4245721
Alignment:
Q  372 ttagtgagcatatcagctaattgttgctcagatcttacaaacggaaaaacaattgtcccagcgtcaagtttctccttgatgaaatgtctatcaatttcaa 471  Q
    ||||| ||||||||||| | |||||| || ||| |||||||||||||  ||||  | ||||| ||||  || || ||||||||||| ||||||||||| |    
T  4246151 ttagtaagcatatcagcaagttgttgttctgattttacaaacggaaatgcaataataccagcttcaatcttttctttgatgaaatgcctatcaatttcca 4246052  T
Q  472 catgttttgtccgatcatgttggacaggattatgtgcaatctctatggcagatgtattatcacaatacaaactcatagcttcttttggctcaaaacccaa 571  Q
    | |||||||| ||||||||||||||||| ||||| |||||||||||||||||| |||| ||||| || |   |||| || || | | | ||| | || |     
T  4246051 cgtgttttgtgcgatcatgttggacagggttatgagcaatctctatggcagatttattgtcacagtaaagcttcattgcatcctcttgttcacatccaag 4245952  T
Q  572 gtctgacaacacactttttacccataacagttcacacattccaagtgccatacctctaaactctgcttcagcacttgatctagctactactggctgcttc 671  Q
     ||    || |   |||| | ||||| ||||||||| ||||| | |||||| || || || |||||||| |||||||||||||| |||||| | || ||     
T  4245951 atcctttaaaaggtttttaatccatagcagttcacatattcctactgccatccccctgaattctgcttcggcacttgatctagcaactacttgttgtttt 4245852  T
Q  672 ttactcctccaagttacaaggtttcctcctacaaaagtgaaatatcctgaggtagatcttctatcatctgctgaacctgcccaatcggcatctgtgtatc 771  Q
    ||||||||||||||||| |  |||||||| |||||||| || || ||||  |||||  |||| ||||| || || || |||||||| ||||| || || |    
T  4245851 ttactcctccaagttactaaatttcctcccacaaaagttaagtagcctgcagtagactttctgtcatccgcagatccggcccaatcagcatcggtataac 4245752  T
Q  772 cttctaccctcaagtgaccattgtttgagaa 802  Q
    |||| ||  | | |||||||| |||||||||    
T  4245751 cttcgactttgaggtgaccatggtttgagaa 4245721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 24123899 - 24123757
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatatttttt--ggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||||| ||||||||||||| ||||||||||||||||||  |||||||| |||||| ||||||||||||||||||||||||||||| |   ||||||||     
T  24123899 acttttcgtatggttcttaattaaaaatacatattttttttggatataacaaactttgagaaaattatggatttgaggaaatcatagtatttttagttag 24123800  T
Q  105 aaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     || ||||| ||||| || ||| ||||||||||||| ||||||    
T  24123799 gaaccatacaaaaagtacataaggaattgtacctaaattttct 24123757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 12142228 - 12142362
Alignment:
Q  14 gtatggttcttaactaaaaatacatat-tttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacata 112  Q
    |||||||||||||||||||||| |||| ||||||||||||| || ||| |||||||||||||||||||| |||||||  ||||||||||||| ||  |||    
T  12142228 gtatggttcttaactaaaaatatatatatttttggatataacaatctttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaactata 12142327  T
Q  113 cgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| ||| ||| |||||||||| || ||||||    
T  12142328 cgaaaaacacataaggaattgtacccaaattttct 12142362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 29277867 - 29278004
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||||||||||||||||||||||||||||  | ||||||||| || ||| || ||||||||| ||||||| ||||||||||  |||||||||||||||    
T  29277867 actttttgtatggttcttaactaaaaatacac-tgttttggatacaacaaagtttgagaaaattttggatttaaggaaatcatggtgaatttagttaaaa 29277965  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagtttt 145  Q
    | |||||| |||  |  ||| ||||||||||||||||||    
T  29277966 atcatacggaaaatatataaggaattgtacctaagtttt 29278004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 31521655 - 31521538
Alignment:
Q  19 gttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaa 118  Q
    ||||||||||||||||  |||||||||||||||||||||||| || ||||||||| ||||||| |||||||  | ||||||||||| || ||||||||||    
T  31521655 gttcttaactaaaaatgaatattttttggatataataaactttgaaaaaattatgaatttgagaaaatcatggtaaatttagttaagaaccatacgaaaa 31521556  T
Q  119 gcacctaatgaattgtac 136  Q
    ||| ||||  ||||||||    
T  31521555 gcatctaagaaattgtac 31521538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 48 - 147
Target Start/End: Complemental strand, 39143813 - 39143714
Alignment:
Q  48 atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||| |||||| ||||| ||||||||||||||||||| ||  |||||||||| || || ||||||||||||| | |||||||||||||||||||||||    
T  39143813 atataacaaactttgagaatattatggatttgaggaaattatggtgaatttagtcaagaaccatacgaaaagcatccaatgaattgtacctaagttttct 39143714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 9 - 118
Target Start/End: Original strand, 33749674 - 33749784
Alignment:
Q  9 tttttgtatggttcttaactaaaaata-catattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||| ||||| |||||||||||||||| |||  ||||| |||||||||||||| |||||||||||| |||| |||||||||| |||||||||||||| ||    
T  33749674 ttttcgtatgattcttaactaaaaatatcattatttttagatataataaactttgagaaaattatgaatttaaggaaatcatgatgaatttagttaagaa 33749773  T
Q  108 acatacgaaaa 118  Q
     ||||| ||||    
T  33749774 ccatacaaaaa 33749784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 8 - 103
Target Start/End: Original strand, 7955011 - 7955106
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagtta 103  Q
    ||||||||||||||||||||||||||||||| ||||||  |||||| |||||  ||||| ||||| |||||| ||||||||| || ||||||||||    
T  7955011 ctttttgtatggttcttaactaaaaatacattttttttttatataaaaaactcagagaagattatagatttgtggaaatcatgataaatttagtta 7955106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 35665757 - 35665691
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatgg 74  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||| |||||||| ||||    
T  35665757 cttttcgtatggtttttaactaaaaatacatattttttggatataacaaactttgagaaaatcatgg 35665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 47237569 - 47237435
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttgg---atataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||| ||||||||||||||||||||||||| ||||||     |||||| |||||| |||||||||||||||| ||||||||       |||||||||||    
T  47237569 cttttcgtatggttcttaactaaaaatacatttttttttttttatataacaaactttgagaaaattatggattcgaggaaat-------aatttagttaa 47237477  T
Q  105 aaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     || |||| ||||||||||| | ||||| ||||||||||||||    
T  47237476 gaaccataggaaaagcacct-aggaattatacctaagttttct 47237435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 38528553 - 38528470
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatt--ttttggatataataaacttcgagaaaattatggatttgaggaaatcat 89  Q
    ||||| ||||||||||||||||||||||||||||  ||||  |||||| |||||| |||||||||||||||| |||||| ||||    
T  38528553 cttttcgtatggttcttaactaaaaatacatattttttttttatataacaaactttgagaaaattatggattcgaggaattcat 38528470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 35665734 - 35665785
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  35665734 tttagttaaaaaccatacgaaaagcacctaaggaattgtacctaagttttct 35665785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 90
Target Start/End: Complemental strand, 40596825 - 40596745
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcata 90  Q
    |||||||||||||||||||||||||||||  |||||| | ||||| |||||| || ||||||||||||| |||||| |||||    
T  40596825 tttttgtatggttcttaactaaaaatacaactttttttgttataacaaactttga-aaaattatggattcgaggaagtcata 40596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 10936588 - 10936639
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  10936588 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 10936639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 31231734 - 31231785
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  31231734 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 31231785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 38528530 - 38528581
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  38528530 tttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 38528581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 33721879 - 33721829
Alignment:
Q  97 ttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  33721879 ttagttaagaaccatacgaaaagcacctaaggaattgtacctaagttttct 33721829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 38528420 - 38528457
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatatttttt 45  Q
    ||||||||||||||||||||||||||||||||||||||    
T  38528420 ctttttgtatggttcttaactaaaaatacatatttttt 38528457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 98 - 147
Target Start/End: Original strand, 39143826 - 39143875
Alignment:
Q  98 tagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||| || |||||||||| ||||||||||||||||||||||||||||    
T  39143826 tagttaagaaccatacgaaaaacacctaatgaattgtacctaagttttct 39143875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 34052332 - 34052276
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || |||||||||||||||||| ||| |||||||||||||||| ||||    
T  34052332 tttagttaagaaccatacgaaaagcacctaaggaaatgtacctaagttttctccaaa 34052276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 20184357 - 20184408
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  20184357 tttagttaagaatcatacgaaaagcagctaaggaattgtacctaagttttct 20184408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 35665686 - 35665635
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||  |||||||||||||||||||    
T  35665686 tttagttaagaaccatacgaaaagcacctaagcaattgtacctaagttttct 35665635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 38883274 - 38883223
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||| |||| ||||||||||||||||||||    
T  38883274 tttagttaagaaccatacgaaaagcatctaaggaattgtacctaagttttct 38883223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 1072271 - 1072342
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatca 88  Q
    |||||||||||| ||||||||||| ||||||  |||||| |||||  ||| ||||||| |||||||||||||||    
T  1072271 tatggttcttaattaaaaatacatttttttt--atataacaaactcagaggaaattatagatttgaggaaatca 1072342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 10398381 - 10398486
Alignment:
Q  40 ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaattgtaccta 139  Q
    |||||| | ||||| |||||| ||||| |||||| |||||||||||||||    ||||||||||| || ||||| |||||||  ||| ||| || |||||    
T  10398381 tttttttgttataacaaactttgagaagattatgtatttgaggaaatcatggataatttagttaagaaccatacaaaaagcatataaggaaatgcaccta 10398480  T
Q  140 agtttt 145  Q
    ||||||    
T  10398481 agtttt 10398486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 28723567 - 28723608
Alignment:
Q  19 gttcttaactaaaaatacatattttttggatataataaactt 60  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  28723567 gttcttaactaaaaatacacattttatggatataataaactt 28723608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 24836073 - 24836022
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||| | || ||||||||||||||||||  |||||||||||||||||||    
T  24836073 tttagttnagaaccatacgaaaagcacctaagcaattgtacctaagttttct 24836022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 96 - 152
Target Start/End: Complemental strand, 29277891 - 29277835
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||| || ||||| ||||| |||||| |||||||||||||||||||| ||||    
T  29277891 tttagttaagaaccatacaaaaagtacctaaagaattgtacctaagttttctccaaa 29277835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 118
Target Start/End: Complemental strand, 38989213 - 38989102
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacata--ttttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||| |||||||| |||||| |||||||| |  | | || ||||||| |||||| ||||||||||| ||||| || |||| || || |||||||||||||    
T  38989213 ttttcgtatggttattaactgaaaatacacacctatattagatataacaaactttgagaaaattatagatttaagaaaattatgataaatttagttaaaa 38989114  T
Q  107 aacatacgaaaa 118  Q
    |  |||||||||    
T  38989113 actatacgaaaa 38989102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 152
Target Start/End: Original strand, 17101705 - 17101748
Alignment:
Q  109 catacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    ||||||||||||||||||  ||||||||||||||||||| ||||    
T  17101705 catacgaaaagcacctaagaaattgtacctaagttttctccaaa 17101748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 30259184 - 30259235
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| ||||||||| || ||||||||||||||||||||    
T  30259184 tttagttaagaaccatacaaaaagcacccaaggaattgtacctaagttttct 30259235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 30594746 - 30594695
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| ||  || |||||||||||||| ||||||||||||||||||||    
T  30594746 tttagttaagaactatgcgaaaagcacctaaggaattgtacctaagttttct 30594695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 47237546 - 47237597
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||| |  |||||||||||||||||||    
T  47237546 tttagttaagaaccatacgaaaagcaccttagaaattgtacctaagttttct 47237597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 48103421 - 48103370
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| |||||||  |||||||||||||||||||    
T  48103421 tttagttaagaatcatacgaaaaacacctaagaaattgtacctaagttttct 48103370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 17101694 - 17101656
Alignment:
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  17101694 catacgaaaagcacctaagaaattgtacctaagttttct 17101656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 52
Target Start/End: Complemental strand, 4453230 - 4453193
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatata 52  Q
    ||||||||||||||||||||||| |||||| |||||||    
T  4453230 tatggttcttaactaaaaatacacatttttcggatata 4453193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 55 - 104
Target Start/End: Original strand, 44148724 - 44148773
Alignment:
Q  55 aaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    |||||| ||||||||||||||||| ||||||||| | |||||||| ||||    
T  44148724 aaactttgagaaaattatggatttaaggaaatcacagtgaatttaattaa 44148773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 45864 - 46003
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| ||    
T  45864 ctttttgtatggttcttaactaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 45963  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| ||||||||||||| ||||||||||||||||||||    
T  45964 ccataagaaaagcacctaaggaattgtacctaagttttct 46003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 45887 - 45836
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||| |||||||||||| ||||||||||||||||||||    
T  45887 tttagttaagaaccatacaaaaagcacctaaggaattgtacctaagttttct 45836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 92; Significance: 4e-44; HSPs: 2)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 92; E-Value: 4e-44
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 51093 - 51232
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||| |||| ||||||||||| ||||||||||||| ||    
T  51093 cttttcgtatggttcttaactaaaaatatatattttttggatataacaaactttgagaaaattatgaatttaaggaaatcatagtgaatttagttaagaa 51192  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
     |||| |||||| |||||| ||||||||||||||||||||    
T  51193 ccatatgaaaagtacctaaggaattgtacctaagttttct 51232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 51116 - 51065
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||    
T  51116 tttagttaagaaccatacgaaaaggacctaaggaattgtacctaagttttct 51065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 7117 - 7255
Alignment:
Q  9 tttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaa 108  Q
    |||| ||||| |||||||||||||||| |||| |||||||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||| ||     
T  7117 ttttcgtatgattcttaactaaaaatatatatattttggatataacaaactttgagaaaattatggatttgaggaaatcatgatgaatttagttaagaac 7216  T
Q  109 catacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    |||||||||||||||||| |||| |||||||| ||||||    
T  7217 catacgaaaagcacctaaggaatcgtacctaaattttct 7255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 7139 - 7088
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||| ||||||| ||||||||||||| ||||||    
T  7139 tttagttaagaatcatacgaaaaacacctaaggaattgtacctaaattttct 7088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0653 (Bit Score: 86; Significance: 1e-40; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 7 - 152
Target Start/End: Complemental strand, 3535 - 3390
Alignment:
Q  7 actttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| || ||||||||  |||||||||||||||  |||||||| |||| |    
T  3535 acttttcgtatggttcttaaataaaaatacatattttttggatataacaaactttgataaaattataaatttgaggaaatcatggtgaatttaattaaga 3436  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttcttcaaa 152  Q
    | ||||| ||||||||| ||||||||||||||||||||||| ||||    
T  3435 accatacaaaaagcaccaaatgaattgtacctaagttttctccaaa 3390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 84; Significance: 2e-39; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 48156 - 48295
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaa 107  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||  ||||||||||||| ||    
T  48156 cttttcgtatggtttttaattaaaaatacatattttttggatataacaaactttgagaaaattatggatttgagaaaatcatggtgaatttagttaagaa 48255  T
Q  108 acatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
      |||||||||||| |||| |||||||| |||||||||||    
T  48256 ctatacgaaaagcatctaaggaattgtatctaagttttct 48295  T

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Target: scaffold0163 (Bit Score: 73; Significance: 8e-33; HSPs: 2)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 2081 - 1941
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttg-gatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaa 106  Q
    |||||| |||||||||||||||||||||| ||||||||  ||||||| |||||| | ||||||||||||||||||||||||||  ||||||||||||| |    
T  2081 ctttttatatggttcttaactaaaaatacgtatttttttagatataacaaactttgtgaaaattatggatttgaggaaatcatggtgaatttagttaaga 1982  T
Q  107 aacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    | ||||| ||||||||||||  |||| ||||||| ||||||    
T  1981 accatacaaaaagcacctaaacaattatacctaaattttct 1941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 147
Target Start/End: Original strand, 2058 - 2109
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||  |||||||||||| ||||||||||||||||||||    
T  2058 tttagttaagaaccatataaaaagcacctaaggaattgtacctaagttttct 2109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 69; Significance: 2e-30; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 15 - 147
Target Start/End: Original strand, 14479 - 14611
Alignment:
Q  15 tatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacg 114  Q
    |||||| |||||||||||||||||||| ||||||||||| | |||| ||||||||||||||| ||| ||| | ||  ||||||||||||| ||  |||||    
T  14479 tatggtacttaactaaaaatacatattatttggatataacagactttgagaaaattatggatatgacgaagtaatggtgaatttagttaagaacgatacg 14578  T
Q  115 aaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || ||||||||||||||||||||    
T  14579 aaaagcacccaaggaattgtacctaagttttct 14611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 66; Significance: 1e-28; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 14 - 147
Target Start/End: Original strand, 10152 - 10284
Alignment:
Q  14 gtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatac 113  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||||| |||| |||||||  |||||||| |||| ||  ||||    
T  10152 gtatggttcttaactaaaaatatatatttt-tggatataacaaactttgagaaaattatggatgtgagaaaatcatggtgaatttacttaagaattatac 10250  T
Q  114 gaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| |||  |||||||||||| ||||||    
T  10251 gaaaagcacataagaaattgtacctaaattttct 10284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 65; Significance: 5e-28; HSPs: 2)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 65; E-Value: 5e-28
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 5731 - 5876
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaactt-cgagaaaat---tatggatttgaggaaatcataatgaatttagtta 103  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||| || | | |  ||   ||||||||||||||||||||  ||||||||||||    
T  5731 cttttcgtatggttcttaactaaaaatacatattttttggatataacaaattttctaaattatggatatggatttgaggaaatcatggtgaatttagtta 5830  T
Q  104 aaaaacatacgaaaagcacctaatg--aattgtacctaagttttct 147  Q
    | || |||||||||||||||||| |  |||||||||||||||||||    
T  5831 agaaccatacgaaaagcacctaaggaaaattgtacctaagttttct 5876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595; HSP #2
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 5754 - 5703
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||| ||||||||    
T  5754 tttagttaagaaccatacgaaaagcacctaaagaattgtaccttagttttct 5703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 1e-25; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 31 - 139
Target Start/End: Complemental strand, 138395 - 138287
Alignment:
Q  31 aaatacatattttttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaaaaaacatacgaaaagcacctaatgaa 130  Q
    |||||||| |||||||||||||||||||||  | |||| ||||||||| || ||||||| |||||||||||||| || |||||||||||| ||||| |||    
T  138395 aaatacatcttttttggatataataaactttaaaaaaaatatggatttaagaaaatcatgatgaatttagttaagaatcatacgaaaagctcctaaggaa 138296  T
Q  131 ttgtaccta 139  Q
    |||||||||    
T  138295 ttgtaccta 138287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 47; Significance: 3e-17; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 8 - 74
Target Start/End: Complemental strand, 72412 - 72346
Alignment:
Q  8 ctttttgtatggttcttaactaaaaatacatattttttggatataataaacttcgagaaaattatgg 74  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| |||||  |||||||||||||    
T  72412 cttttcgtatggtttttaactaaaaatacatattttttggatataacaaactctgagaaaattatgg 72346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 40; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 96 - 147
Target Start/End: Complemental strand, 26458 - 26407
Alignment:
Q  96 tttagttaaaaaacatacgaaaagcacctaatgaattgtacctaagttttct 147  Q
    ||||||||| || |||||||||||||||||| ||||||||||||||||||||    
T  26458 tttagttaataaccatacgaaaagcacctaaggaattgtacctaagttttct 26407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 94207 - 94298
Alignment:
Q  15 tatggttcttaactaaaaatacatatttt--ttggatataataaacttcgagaaaattatggatttgaggaaatcataatgaatttagttaa 104  Q
    ||||||| |||||||||||||||  ||||  |||||||||| |||||  ||||||||| |||||||||  |||||||  |||||||||||||    
T  94207 tatggtttttaactaaaaatacaccttttcattggatataacaaactatgagaaaattttggatttgataaaatcatggtgaatttagttaa 94298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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