View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4845-Insertion-12 (Length: 210)
Name: NF4845-Insertion-12
Description: NF4845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4845-Insertion-12 |
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Alignment Details
Target: chr1 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 209
Target Start/End: Complemental strand, 30421700 - 30421499
Alignment:
| Q |
8 |
aactaaactaaagataacttttttactctcaatacttttcaaatcaccatccttcgacaaacttttcagctctttctccaattgagccttcgttttcttc |
107 |
Q |
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| T |
30421700 |
aactaaactaaagataacttttttactctcagtacttttcaaatcacaatccttcgacaaacttttcagctctttctccaattgagccttcgttttcttc |
30421601 |
T |
|
| Q |
108 |
aaactcctcaacctatcggcagcaagaacacgttgaagttccgaaccaccaccctcatcaatcccttcctccaaattctcattctcctcacattcttcac |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30421600 |
aaactcctcaacctatcggcagcaagaacacgttgaagttccgaaccaccaccctcatcaatcccttcctccaaattctcattctcctcacattcttcac |
30421501 |
T |
|
| Q |
208 |
tt |
209 |
Q |
| |
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|| |
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|
| T |
30421500 |
tt |
30421499 |
T |
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