View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4845-Insertion-3 (Length: 753)

Name: NF4845-Insertion-3
Description: NF4845
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4845-Insertion-3
NF4845-Insertion-3
[»] chr7 (29 HSPs)
chr7 (189-745)||(45145724-45146276)
chr7 (8-162)||(45145540-45145693)
chr7 (623-753)||(13352749-13352878)
chr7 (623-753)||(21675076-21675204)
chr7 (623-748)||(14935946-14936069)
chr7 (623-748)||(15363539-15363662)
chr7 (627-709)||(9723200-9723279)
chr7 (627-709)||(33560442-33560521)
chr7 (623-709)||(45150354-45150437)
chr7 (627-708)||(20582955-20583033)
chr7 (623-709)||(31501988-31502070)
chr7 (627-709)||(14268246-14268326)
chr7 (683-753)||(17923335-17923407)
chr7 (623-694)||(34240561-34240629)
chr7 (623-709)||(9251230-9251313)
chr7 (623-694)||(13448211-13448279)
chr7 (622-697)||(39285585-39285656)
chr7 (623-705)||(9318940-9319019)
chr7 (627-709)||(48357413-48357492)
chr7 (622-709)||(9612131-9612215)
chr7 (622-709)||(9839702-9839786)
chr7 (627-678)||(12759825-12759874)
chr7 (622-658)||(21537223-21537259)
chr7 (627-678)||(45451531-45451580)
chr7 (627-705)||(49047022-49047098)
chr7 (623-658)||(14942768-14942803)
chr7 (623-658)||(15370361-15370396)
chr7 (658-709)||(16914327-16914377)
chr7 (627-709)||(46474741-46474820)
[»] scaffold0022 (2 HSPs)
scaffold0022 (623-709)||(67358-67441)
scaffold0022 (623-694)||(132629-132697)
[»] chr6 (24 HSPs)
chr6 (623-707)||(15004289-15004370)
chr6 (623-714)||(33537705-33537793)
chr6 (625-709)||(17082522-17082603)
chr6 (625-709)||(18506730-18506811)
chr6 (625-753)||(25654957-25655085)
chr6 (623-709)||(18628928-18629013)
chr6 (623-709)||(17547052-17547135)
chr6 (623-705)||(21932003-21932082)
chr6 (627-714)||(116445-116529)
chr6 (627-709)||(22461492-22461571)
chr6 (623-709)||(23223548-23223631)
chr6 (627-709)||(32352796-32352875)
chr6 (622-709)||(22582142-22582226)
chr6 (622-709)||(22584932-22585016)
chr6 (622-709)||(22589763-22589847)
chr6 (653-745)||(15079051-15079145)
chr6 (657-709)||(22848864-22848915)
chr6 (623-680)||(19854906-19854961)
chr6 (653-705)||(14128953-14129003)
chr6 (621-680)||(16596893-16596950)
chr6 (627-709)||(15889111-15889190)
chr6 (622-709)||(25920400-25920483)
chr6 (653-709)||(14153103-14153157)
chr6 (660-709)||(33325548-33325596)
[»] chr8 (37 HSPs)
chr8 (623-714)||(33610368-33610456)
chr8 (623-753)||(22723914-22724043)
chr8 (623-709)||(17502952-17503034)
chr8 (627-748)||(23350997-23351116)
chr8 (623-709)||(24240380-24240462)
chr8 (627-709)||(31590784-31590863)
chr8 (628-709)||(23223340-23223418)
chr8 (626-709)||(45464503-45464583)
chr8 (623-753)||(23157599-23157724)
chr8 (622-709)||(29307260-29307345)
chr8 (626-709)||(33172995-33173074)
chr8 (626-709)||(23159002-23159082)
chr8 (627-709)||(25296986-25297066)
chr8 (627-709)||(25759006-25759086)
chr8 (627-709)||(23218649-23218727)
chr8 (623-709)||(24908575-24908658)
chr8 (623-709)||(24910796-24910879)
chr8 (627-709)||(26012260-26012339)
chr8 (623-709)||(33529250-33529332)
chr8 (653-709)||(18040931-18040986)
chr8 (653-709)||(21258858-21258914)
chr8 (623-709)||(23151169-23151250)
chr8 (655-709)||(27232439-27232491)
chr8 (628-709)||(22745502-22745579)
chr8 (627-709)||(39446086-39446167)
chr8 (627-703)||(19330733-19330806)
chr8 (627-678)||(22221707-22221756)
chr8 (627-678)||(22228049-22228098)
chr8 (660-723)||(22735194-22735257)
chr8 (627-714)||(24968668-24968751)
chr8 (653-709)||(26696027-26696082)
chr8 (627-705)||(38534497-38534573)
chr8 (627-705)||(5855380-5855455)
chr8 (636-753)||(23150634-23150752)
chr8 (627-709)||(41506249-41506325)
chr8 (627-703)||(31193675-31193747)
chr8 (627-714)||(37651823-37651907)
[»] chr4 (21 HSPs)
chr4 (623-709)||(15212958-15213041)
chr4 (626-709)||(7185209-7185289)
chr4 (623-709)||(49072483-49072566)
chr4 (653-747)||(37956330-37956425)
chr4 (627-709)||(13589467-13589546)
chr4 (627-714)||(14902053-14902139)
chr4 (623-709)||(47467720-47467803)
chr4 (623-680)||(12133006-12133061)
chr4 (627-709)||(10375304-10375383)
chr4 (627-709)||(30231846-30231925)
chr4 (623-722)||(13438392-13438488)
chr4 (653-709)||(18493457-18493513)
chr4 (623-694)||(40904319-40904387)
chr4 (653-705)||(41916146-41916197)
chr4 (623-709)||(19560154-19560236)
chr4 (627-705)||(27961798-27961873)
chr4 (627-709)||(15012636-15012713)
chr4 (644-676)||(6942880-6942912)
chr4 (627-678)||(13722451-13722500)
chr4 (627-705)||(18277203-18277278)
chr4 (627-676)||(31635416-31635463)
[»] chr5 (25 HSPs)
chr5 (623-711)||(21215808-21215893)
chr5 (627-709)||(37984192-37984271)
chr5 (627-709)||(3674711-3674790)
chr5 (624-709)||(11762870-11762951)
chr5 (627-709)||(21110545-21110623)
chr5 (627-709)||(23233906-23233985)
chr5 (653-709)||(26559195-26559252)
chr5 (623-678)||(5450190-5450243)
chr5 (627-709)||(3420372-3420451)
chr5 (627-709)||(16834694-16834772)
chr5 (627-709)||(19874530-19874609)
chr5 (624-698)||(23418065-23418136)
chr5 (623-709)||(24084657-24084739)
chr5 (622-709)||(6457420-6457503)
chr5 (653-709)||(11966127-11966182)
chr5 (637-703)||(5621168-5621231)
chr5 (627-709)||(23467280-23467359)
chr5 (653-714)||(19349884-19349944)
chr5 (653-709)||(22662030-22662086)
chr5 (627-678)||(1167588-1167637)
chr5 (627-709)||(433279-433357)
chr5 (627-709)||(7729268-7729347)
chr5 (627-705)||(16596318-16596393)
chr5 (627-676)||(23980886-23980933)
chr5 (627-676)||(24224779-24224826)
[»] chr1 (15 HSPs)
chr1 (623-709)||(25094653-25094735)
chr1 (627-709)||(22828765-22828844)
chr1 (627-725)||(16646760-16646856)
chr1 (623-709)||(5470363-5470445)
chr1 (623-709)||(18851790-18851872)
chr1 (627-709)||(17609698-17609777)
chr1 (654-709)||(36355612-36355666)
chr1 (627-709)||(38033023-38033102)
chr1 (623-709)||(52401394-52401476)
chr1 (624-709)||(20839158-20839239)
chr1 (653-753)||(33398141-33398241)
chr1 (623-694)||(75801-75870)
chr1 (29-65)||(42664653-42664689)
chr1 (658-709)||(19603966-19604016)
chr1 (629-678)||(22402463-22402511)
[»] chr3 (35 HSPs)
chr3 (625-709)||(38375065-38375146)
chr3 (622-709)||(8605638-8605721)
chr3 (627-705)||(17758070-17758145)
chr3 (627-705)||(19059390-19059465)
chr3 (627-709)||(39657369-39657448)
chr3 (621-705)||(9590086-9590166)
chr3 (627-709)||(43426910-43426988)
chr3 (623-709)||(25103360-25103442)
chr3 (623-695)||(9150135-9150204)
chr3 (622-709)||(18970709-18970793)
chr3 (653-705)||(12487124-12487176)
chr3 (626-705)||(13300796-13300872)
chr3 (626-705)||(13311452-13311528)
chr3 (623-709)||(17586277-17586359)
chr3 (623-709)||(33368330-33368412)
chr3 (627-709)||(40939971-40940050)
chr3 (623-698)||(10913680-10913752)
chr3 (627-709)||(15521788-15521868)
chr3 (653-705)||(31411040-31411091)
chr3 (623-709)||(11403397-11403480)
chr3 (627-677)||(12348666-12348714)
chr3 (637-703)||(21166455-21166518)
chr3 (623-709)||(40038299-40038382)
chr3 (660-709)||(14081352-14081400)
chr3 (623-698)||(11514887-11514959)
chr3 (628-703)||(34560625-34560697)
chr3 (653-709)||(38810333-38810388)
chr3 (627-678)||(50111424-50111473)
chr3 (627-709)||(11328306-11328386)
chr3 (627-705)||(17140335-17140410)
chr3 (627-658)||(19947530-19947561)
chr3 (628-709)||(12559563-12559641)
chr3 (631-676)||(13836455-13836498)
chr3 (660-709)||(11060330-11060378)
chr3 (627-753)||(17192336-17192461)
[»] chr2 (20 HSPs)
chr2 (626-709)||(19660725-19660805)
chr2 (622-709)||(11010475-11010558)
chr2 (625-709)||(19667370-19667451)
chr2 (627-709)||(43646685-43646762)
chr2 (623-709)||(16292194-16292277)
chr2 (623-704)||(24841705-24841782)
chr2 (627-714)||(19433147-19433231)
chr2 (623-714)||(24278554-24278642)
chr2 (627-709)||(68818-68897)
chr2 (627-709)||(9638202-9638281)
chr2 (623-709)||(24885483-24885568)
chr2 (653-709)||(723237-723292)
chr2 (623-709)||(25595815-25595897)
chr2 (627-676)||(23836066-23836113)
chr2 (627-709)||(16446573-16446652)
chr2 (627-714)||(7322355-7322438)
chr2 (627-709)||(22579221-22579303)
chr2 (627-709)||(24086774-24086854)
chr2 (627-694)||(4447473-4447539)
chr2 (623-680)||(29115167-29115221)
[»] scaffold0808 (1 HSPs)
scaffold0808 (653-748)||(1596-1691)
[»] scaffold1932 (1 HSPs)
scaffold1932 (623-698)||(758-829)
[»] scaffold0357 (1 HSPs)
scaffold0357 (623-737)||(7180-7293)
[»] scaffold0561 (1 HSPs)
scaffold0561 (627-709)||(2316-2395)
[»] scaffold0162 (1 HSPs)
scaffold0162 (623-709)||(6397-6480)
[»] scaffold0385 (1 HSPs)
scaffold0385 (621-709)||(11998-12082)
[»] scaffold0165 (1 HSPs)
scaffold0165 (625-705)||(30757-30834)
[»] scaffold0032 (1 HSPs)
scaffold0032 (623-709)||(103941-104025)
[»] scaffold0406 (1 HSPs)
scaffold0406 (627-709)||(14809-14888)
[»] scaffold0149 (1 HSPs)
scaffold0149 (658-709)||(32743-32793)
[»] scaffold0057 (1 HSPs)
scaffold0057 (623-709)||(6641-6720)
[»] scaffold0049 (1 HSPs)
scaffold0049 (623-709)||(32793-32876)
[»] scaffold0006 (1 HSPs)
scaffold0006 (627-709)||(196651-196730)
[»] scaffold0601 (1 HSPs)
scaffold0601 (625-709)||(247-328)
[»] scaffold0130 (1 HSPs)
scaffold0130 (623-703)||(26372-26448)
[»] scaffold0610 (1 HSPs)
scaffold0610 (653-709)||(9434-9489)
[»] scaffold0387 (1 HSPs)
scaffold0387 (623-709)||(327-411)
[»] scaffold0342 (1 HSPs)
scaffold0342 (653-709)||(13138-13193)
[»] scaffold0025 (1 HSPs)
scaffold0025 (622-709)||(86324-86408)
[»] scaffold0117 (1 HSPs)
scaffold0117 (627-753)||(10846-10972)
[»] scaffold0095 (1 HSPs)
scaffold0095 (627-709)||(33048-33129)
[»] scaffold0634 (1 HSPs)
scaffold0634 (623-703)||(6211-6287)
[»] scaffold0120 (1 HSPs)
scaffold0120 (622-678)||(22337-22391)
[»] scaffold0669 (1 HSPs)
scaffold0669 (623-674)||(2898-2947)
[»] scaffold0193 (1 HSPs)
scaffold0193 (653-709)||(5393-5448)
[»] scaffold0123 (1 HSPs)
scaffold0123 (653-709)||(11745-11800)
[»] scaffold0116 (1 HSPs)
scaffold0116 (627-678)||(30927-30976)
[»] scaffold0083 (1 HSPs)
scaffold0083 (627-678)||(15676-15725)
[»] scaffold0016 (1 HSPs)
scaffold0016 (623-678)||(165050-165103)
[»] scaffold1092 (1 HSPs)
scaffold1092 (628-678)||(2544-2592)
[»] scaffold0876 (1 HSPs)
scaffold0876 (627-705)||(605-679)
[»] scaffold0700 (1 HSPs)
scaffold0700 (627-709)||(3295-3374)
[»] scaffold0317 (1 HSPs)
scaffold0317 (722-753)||(11916-11947)
[»] scaffold0302 (1 HSPs)
scaffold0302 (623-658)||(16711-16746)
[»] scaffold0151 (1 HSPs)
scaffold0151 (627-705)||(21740-21814)
[»] scaffold0148 (1 HSPs)
scaffold0148 (627-677)||(38356-38404)
[»] scaffold0080 (1 HSPs)
scaffold0080 (627-709)||(23085-23163)
[»] scaffold0047 (1 HSPs)
scaffold0047 (623-658)||(19343-19378)
[»] scaffold0028 (1 HSPs)
scaffold0028 (623-709)||(80381-80463)
[»] scaffold0009 (1 HSPs)
scaffold0009 (627-709)||(70256-70335)
[»] scaffold0452 (1 HSPs)
scaffold0452 (624-658)||(2202-2236)
[»] scaffold0138 (1 HSPs)
scaffold0138 (623-676)||(21781-21832)
[»] scaffold0035 (2 HSPs)
scaffold0035 (627-676)||(108821-108868)
scaffold0035 (627-676)||(117322-117369)
[»] scaffold0012 (1 HSPs)
scaffold0012 (622-652)||(180314-180344)
[»] scaffold0058 (1 HSPs)
scaffold0058 (653-714)||(69653-69713)


Alignment Details
Target: chr7 (Bit Score: 352; Significance: 0; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 189 - 745
Target Start/End: Original strand, 45145724 - 45146276
Alignment:
Q  189 aaatcataagttcattaaccatttttcctcaattaagcttgttgttagctttgtaannnnnnnncttggttcaaagcaaaggttttatcaattgcaatga 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||  ||||        
T  45145724 aaatcataagttcattaaccatttttcctcaattaagcttgttgttagctttgtaattttttttcttggttcaaagcaaaggttttatcagctgca---- 45145819  T
Q  289 ttcaacccctctctactcactttttctgannnnnnnnn-attgttcccatcttgtgccatgcatttcttgttttgcaatatttatttataattaatgttg 387  Q
    |||||||||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45145820 ttcaacccctctctactcactttttctgattttttttttattgttcccatcttgtgccatgcatttcttgttttgcaatatttatttataattaatgttg 45145919  T
Q  388 tgcaatgtgccacatccgaaattaagaacggcaaccctgagatgttgatgctttaaattgtgtttcgattaactaaacaaaactcaacttgaccacgtac 487  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45145920 tgcaatgtgccacatctgaaattaagaacggcaaccctgagatgttgatgctttaaattgtgtttcgattaactaaacaaaactcaacttgaccacgtac 45146019  T
Q  488 ggcgtaacgctcgaatgatgtatgcaagannnnnnnnnnnatgattggaatttgaaccccgaaccttacatgcattgtctataccaactgcgttaaactc 587  Q
    ||||||||| |||||||||||||||||||           ||||| ||||||| |||| ||||| || |||||||||||||||||| | | |||||||||    
T  45146020 ggcgtaacgttcgaatgatgtatgcaagatttttttttttatgatcggaatttaaacctcgaactttgcatgcattgtctataccagccgagttaaactc 45146119  T
Q  588 acaattcataaaacacttgattaaacccaaagtttcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaaca 687  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  |||||    
T  45146120 acaattcataaaacatttgattaaacctaaagtttcattaaaatgcatccaatgataaataat--cacacacaagcacatataaacacatatt-aaaaca 45146216  T
Q  688 attaaaaataaatctagcgaaattcg-actattac-actctcccccctaaaaagaatttt 745  Q
    |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  45146217 attaaaaataaatctagcgaaaatcgaactattacaactctcccccctaaaaagaatttt 45146276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 8 - 162
Target Start/End: Original strand, 45145540 - 45145693
Alignment:
Q  8 attttgataacactttgaaatttcaacaaaatcacgatgctaccgtgattttgtcaaatttcgtgtgattctaaacatacacctaatatttcggagacaa 107  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||  |||||    
T  45145540 attttgataacactttgaaatttcaacaaaatcacgatgctaccatgattttgtcaa-tttcgtgtgattctaaacatacacctaatatttcgtggacaa 45145638  T
Q  108 aaggttatgaccggtctaatttcattctactatgtagtctttattcaatgtactc 162  Q
    |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  45145639 aaggttatgaccagtctaatttcattctactatgtagtctttatccaatgtactc 45145693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 623 - 753
Target Start/End: Original strand, 13352749 - 13352878
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    |||||||||||| |||||||||||||||  ||| |||||||||||||||||| |||||  ||||||||||||||||||||||| ||| || |  | ||||    
T  13352749 cattaaaatgcacccaatgataaataat--cacgcacaagcacatataaacaaatatt-aaaacaattaaaaataaatctagcaaaaatcgggatgttac 13352845  T
Q  722 -actctcccccctaaaaagaattttcgctctcg 753  Q
     ||||| ||||||||||||||||||||| ||||    
T  13352846 aactctaccccctaaaaagaattttcgccctcg 13352878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 623 - 753
Target Start/End: Complemental strand, 21675204 - 21675076
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcg-aaattcgactattac 721  Q
    |||||||||||| |||||| ||||||||||||  |||||||||||||||||||| |||  |||||||||||||||| ||||||| ||||| | || ||||    
T  21675204 cattaaaatgcacccaatggtaaataatcaca--cacaagcacatataaacacacatt-aaaacaattaaaaataattctagcgaaaattgggctgttac 21675108  T
Q  722 -actctcccccctaaaaagaattttcgctctcg 753  Q
     |||||||||||| |||||||||||||| ||||    
T  21675107 aactctcccccct-aaaagaattttcgccctcg 21675076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 623 - 748
Target Start/End: Original strand, 14935946 - 14936069
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    |||||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||  |||||||| |||||||||||||||||| || | |||||||    
T  14935946 cattaaaatgcacccaatgataaataat--cacacacaaacacata-aaacacatatt-aaaacaatt-aaaataaatctagcgaaaatcgggctattac 14936040  T
Q  722 -actct-cccccctaaaaagaattttcgc 748  Q
     ||||| ||||||||||||||||||||||    
T  14936041 aactctccccccctaaaaagaattttcgc 14936069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 623 - 748
Target Start/End: Original strand, 15363539 - 15363662
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    |||||||||||| |||||||||||||||  ||||||||| |||||| |||||||||||  |||||||| |||||||||||||||||| || | |||||||    
T  15363539 cattaaaatgcacccaatgataaataat--cacacacaaacacata-aaacacatatt-aaaacaatt-aaaataaatctagcgaaaatcgggctattac 15363633  T
Q  722 -actct-cccccctaaaaagaattttcgc 748  Q
     ||||| ||||||||||||||||||||||    
T  15363634 aactctccccccctaaaaagaattttcgc 15363662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 9723279 - 9723200
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||||||||||||| |||||||  ||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  9723279 aaaatgcacccaatgataaataataacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctagcgaaa 9723200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 33560442 - 33560521
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||  |||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  33560442 aaaatgcactcaatgataaatattcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 33560521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 45150354 - 45150437
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||| ||||||| |||| |  ||||||||||||||||||  |||||||||||||||||||||||||||    
T  45150354 cattaaaatgcacccaatgataagtaatcacgcacaaa--cacatataaacacatatta-aaacaattaaaaataaatctagcgaaa 45150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 627 - 708
Target Start/End: Complemental strand, 20583033 - 20582955
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaa 708  Q
    |||||||| |||| ||||||||||||||||||  |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  20583033 aaaatgcacccaacgataaataatcacacaca--agcacataaaaacacatatta-aaacaattaaaaataaatctagcgaa 20582955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 31501988 - 31502070
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||| |||||| |||||||||||  |||||||| |||||||||||  |||||||||||||||||||||||||||    
T  31501988 cattaaaatgcacccaacgataaaaaatcacacaca--agcacata-aaacacatatta-aaacaattaaaaataaatctagcgaaa 31502070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 14268326 - 14268246
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    ||||| || |||||||||||||||||||||||  ||||||||||||||||||||  |||||||| ||||||||||||| |||||    
T  14268326 aaaatacacccaatgataaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaaataaatctaacgaaa 14268246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 683 - 753
Target Start/End: Original strand, 17923335 - 17923407
Alignment:
Q  683 aaacaattaaaaataaatctagcgaaattcga-ctattaca-ctctcccccctaaaaagaattttcgctctcg 753  Q
    |||||||||||| |||||||||||||| |||  |||||||| |||||||||||||||||||||||||| ||||    
T  17923335 aaacaattaaaattaaatctagcgaaaatcgggctattacaactctcccccctaaaaagaattttcgccctcg 17923407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 694
Target Start/End: Complemental strand, 34240629 - 34240561
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    |||||||||||| |||||||| ||||||||||||||  ||||||||||||||||||||  ||||||||||||    
T  34240629 cattaaaatgcacccaatgatgaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaa 34240561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 9251230 - 9251313
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| | || ||||||||||  |||||||||||||||| ||||| |||||  |||||||||||||||| ||||||||||    
T  9251230 cattaaaatgcaccgaacgataaataat--cacacacaagcacataaaaacatatatt-aaaacaattaaaaataattctagcgaaa 9251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 694
Target Start/End: Complemental strand, 13448279 - 13448211
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    |||||||||||| |||| ||||||||||||||  |||||||||||| |||||||||||  ||||||||||||    
T  13448279 cattaaaatgcacccaacgataaataatcaca--cacaagcacataaaaacacatatt-aaaacaattaaaa 13448211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 697
Target Start/End: Complemental strand, 39285656 - 39285585
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaata 697  Q
    |||| |||||||| |||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||||||||    
T  39285656 tcataaaaatgcacccaatgataaataatcaca--cacaagcacatat-aacacatatt-aaaacaattaaaaata 39285585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 705
Target Start/End: Complemental strand, 9319019 - 9318940
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||||||| | || ||||||||||||||  |||||||||||| ||||| |||||  |||||||||||||||| ||||||    
T  9319019 cattaaaatgcacctaacgataaataatcaca--cacaagcacataaaaacatatatt-aaaacaattaaaaataattctagc 9318940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 48357413 - 48357492
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| | |||||||| ||||||||||||  |||||| ||||||||||| |  |||| ||||||||||||||||||||||    
T  48357413 aaaatgcacctaatgataattaatcacacaca--agcacaaataaacacataata-aaacgattaaaaataaatctagcgaaa 48357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 9612131 - 9612215
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||| |||||||| |||||||  ||||||||||  |||||||||| ||||||||||| |  || |||||||||||||||||| |||||    
T  9612131 tcatcaaaatgcacccaatgaagaataatcaca--cacaagcacaaataaacacataat-aaagcaattaaaaataaatctaacgaaa 9612215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 9839702 - 9839786
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||| |||||||| |||||||  ||||||||||  |||||||||| ||||||||||| |  || |||||||||||||||||| |||||    
T  9839702 tcatcaaaatgcacccaatgaagaataatcaca--cacaagcacaaataaacacataat-aaagcaattaaaaataaatctaacgaaa 9839786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 12759825 - 12759874
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||||||    
T  12759825 aaaatgcacccaatgatgaataatcaca--cacaagcacatataaacacata 12759874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 622 - 658
Target Start/End: Complemental strand, 21537259 - 21537223
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacaca 658  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21537259 tcattaaaatgcacccaatgataaataatcacacaca 21537223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 45451580 - 45451531
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  45451580 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacata 45451531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 49047098 - 49047022
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagc 705  Q
    |||||||| |||||||| ||| ||||||||||  |||||||||||||||||| |  |||||||| |||||||||||||||    
T  49047098 aaaatgcacccaatgatgaatgatcacacaca--agcacatataaacacataat-aaaacaattaaaaaataaatctagc 49047022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 658
Target Start/End: Original strand, 14942768 - 14942803
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacaca 658  Q
    |||||||||||| |||||||||||||||||||||||    
T  14942768 cattaaaatgcacccaatgataaataatcacacaca 14942803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 658
Target Start/End: Original strand, 15370361 - 15370396
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacaca 658  Q
    |||||||||||| |||||||||||||||||||||||    
T  15370361 cattaaaatgcacccaatgataaataatcacacaca 15370396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 709
Target Start/End: Complemental strand, 16914377 - 16914327
Alignment:
Q  658 acaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  16914377 acaagcacaaataaacacataata-aaacaattaaaaataaatctagcgaaa 16914327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 46474741 - 46474820
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||| || ||||||||||||| |||||  ||||||||||||||||||||| ||  |||||| ||||||||| | ||||||||    
T  46474741 aaaatacacccaatgataaatattcaca--cacaagcacatataaacacatgtt-aaaacaactaaaaataattatagcgaaa 46474820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 64; Significance: 1e-27; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 67441 - 67358
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  67441 cattaaaatgcatccaatgataaataatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 67358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 694
Target Start/End: Original strand, 132629 - 132697
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    |||||||||||| |||| ||||||||||  |||||||||||||||| |||||||||||  ||||||||||||    
T  132629 cattaaaatgcacccaacgataaataat--cacacacaagcacataaaaacacatatt-aaaacaattaaaa 132697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 5e-24; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 623 - 707
Target Start/End: Complemental strand, 15004370 - 15004289
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcga 707  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  15004370 cattaaaatgcacccaatgataaataatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagcga 15004289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 623 - 714
Target Start/End: Complemental strand, 33537793 - 33537705
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||||||| | |||||||||||||||||||||  ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  33537793 cattaaaatgcacctaatgataaataatcacacaca--agcacatataaacacatatta-aaacaattaaaaataaatctagcgaaaatcga 33537705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 625 - 709
Target Start/End: Complemental strand, 17082603 - 17082522
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| ||||||| |||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  17082603 ttaaaatgcacccaatgacaaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 17082522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 625 - 709
Target Start/End: Complemental strand, 18506811 - 18506730
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| |||||||||||||||||| ||||  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  18506811 ttaaaatgcacccaatgataaataatcacgcaca--agcacatataaacacatatta-aaacaattaaaaataaatctagcgaaa 18506730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 625 - 753
Target Start/End: Original strand, 25654957 - 25655085
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac-a 722  Q
    ||||||| || |||||||||||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||| ||| || | || |||| |    
T  25654957 ttaaaatacacccaatgataaataatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagcaaaaatcgggctgttacaa 25655053  T
Q  723 ctctcccc-cctaaaaagaattttcgctctcg 753  Q
    |||||||| | |||||||||||||||| ||||    
T  25655054 ctctcccctcgtaaaaagaattttcgcactcg 25655085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 18629013 - 18628928
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt--aaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||  ||||||||  |||||||||||||||||||    
T  18629013 cattaaaatgcacccaatgataaataatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaaaataaatctagcgaaa 18628928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 17547135 - 17547052
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| | |||||| ||||||||||||||  ||||||||||| ||||||||  |||||||||||||||||||||||||||    
T  17547135 cattaaaatgcaccaaatgatgaataatcacacaca--agcacatataagcacatatta-aaacaattaaaaataaatctagcgaaa 17547052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 705
Target Start/End: Original strand, 21932003 - 21932082
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||| ||||||| |||||||||| ||||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21932003 cattgaaatgcacccaatgataattaatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagc 21932082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 116529 - 116445
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||| |||||||||||||||||||  ||||||||| ||||||||| ||||  |||||||||||||||| |||||||||| ||||    
T  116529 aaaatgcacccaatgataaataatcaca--cacaagcacgtataaacacgtatt-aaaacaattaaaaataattctagcgaaaatcga 116445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 22461571 - 22461492
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| || ||||||||||||||||||  ||||||||||||||||||||  |||| ||||||||||| ||||||||||    
T  22461571 aaaatgcatcaaacgataaataatcacacaca--agcacatataaacacatatt-aaaacgattaaaaataattctagcgaaa 22461492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 23223548 - 23223631
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||  ||||| ||| ||||||||||||||||||  |||||||||||||||| |||| |||||    
T  23223548 cattaaaatgcaaccaatgataaataat--cacacccaaacacatataaacacatatt-aaaacaattaaaaataattctaacgaaa 23223631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 32352796 - 32352875
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| | ||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  32352796 aaaatgcaccaaatgataaatattcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatatagcgaaa 32352875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 709
Target Start/End: Complemental strand, 22582226 - 22582142
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| |||| ||||||||||  |||| ||||||||||| |||||||||||  ||| |||||| ||||||||||||||||    
T  22582226 tcattaaaatgcacccaacgataaataat--cacatacaagcacataaaaacacatatt-aaaagaattaagaataaatctagcgaaa 22582142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 709
Target Start/End: Complemental strand, 22585016 - 22584932
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| |||| ||||||||||  |||| ||||||||||| |||||||||||  ||| |||||| ||||||||||||||||    
T  22585016 tcattaaaatgcacccaacgataaataat--cacatacaagcacataaaaacacatatt-aaaagaattaagaataaatctagcgaaa 22584932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 622 - 709
Target Start/End: Complemental strand, 22589847 - 22589763
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| |||| ||||||||||  |||| ||||||||||| |||||||||||  ||| |||||| ||||||||||||||||    
T  22589847 tcattaaaatgcacccaacgataaataat--cacatacaagcacataaaaacacatatt-aaaagaattaagaataaatctagcgaaa 22589763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 653 - 745
Target Start/End: Complemental strand, 15079145 - 15079051
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac-actct-cccccctaaaaagaatttt 745  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||||||||||||||| || | || |||| ||||| |||||||||||||||||||    
T  15079145 cacacacaagcacatataaccacataata-aaacaattaaaaataaatctagcgaaaatcgggctgttacaactctccccccctaaaaagaatttt 15079051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 657 - 709
Target Start/End: Original strand, 22848864 - 22848915
Alignment:
Q  657 cacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||| |||||    
T  22848864 cacaagcacatataaacacatatt-aaaacaattaaaaataaatctaacgaaa 22848915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 19854906 - 19854961
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatatt 680  Q
    |||||||||||| |||| ||||||||||  ||||||||| ||||||||||||||||||    
T  19854906 cattaaaatgcacccaacgataaataat--cacacacaaacacatataaacacatatt 19854961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 705
Target Start/End: Original strand, 14128953 - 14129003
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||||||| ||| |||||||||||  |||||||||||||||||||||||    
T  14128953 cacacacaagcatatagaaacacatatt--aaacaattaaaaataaatctagc 14129003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 621 - 680
Target Start/End: Complemental strand, 16596950 - 16596893
Alignment:
Q  621 ttcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatatt 680  Q
    |||||||||||||| |||||||||||||||  ||| || ||||||||| |||||||||||    
T  16596950 ttcattaaaatgcacccaatgataaataat--cacgcagaagcacataaaaacacatatt 16596893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 15889190 - 15889111
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||   |||||| |||| ||||| |||||||||  |||||||||||||||| |||| |||||    
T  15889190 aaaatgcacccaatgataaataat--tacacacgagcatatatacacacatatt-aaaacaattaaaaataattctaacgaaa 15889111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 25920400 - 25920483
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaac-aattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| ||||||| |||||||  |||||||||||||||| ||| ||||||   |||| |||||||||||| |||| |||||    
T  25920400 tcattaaaatgcacccaatgacaaataat--cacacacaagcacataaaaatacatat---aaactaattaaaaataattctaacgaaa 25920483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 14153103 - 14153157
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| ||| |||||| ||||  ||||||||||||||||||||| |||||    
T  14153103 cacacacaagcatataaaaacacttatt--aaacaattaaaaataaatctaacgaaa 14153157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 709
Target Start/End: Original strand, 33325548 - 33325596
Alignment:
Q  660 aagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||| |  |||||| ||||||||||||||||||||    
T  33325548 aagcacatataaacacataata-aaacaaataaaaataaatctagcgaaa 33325596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 2e-23; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 623 - 714
Target Start/End: Complemental strand, 33610456 - 33610368
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||||||| |||||||||||||||||||  |||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||    
T  33610456 cattaaaatgcacccaatgataaataatcaca--cacaagcatatataaacacatatt-aaaacaattaaaaataaatctagcgaaaatcga 33610368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 623 - 753
Target Start/End: Original strand, 22723914 - 22724043
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga-ctattac 721  Q
    ||||| |||||| |||||||||||||||||| ||||  |||||||| |||||||||||  ||| |||||||||||| |||||||||| |||  || ||||    
T  22723914 cattagaatgcacccaatgataaataatcacgcaca--agcacatacaaacacatatta-aaataattaaaaataagtctagcgaaaatcgggctgttac 22724010  T
Q  722 a-ctctcccccctaaaaagaattttcgctctcg 753  Q
    | |||||||||||||||||||||||||| ||||    
T  22724011 aactctcccccctaaaaagaattttcgccctcg 22724043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 17502952 - 17503034
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||| || |||||||||||||||| |  |||||||| |||||||||||  |||||||||||||||||||||||||||    
T  17502952 cattaaaatgcatctaacgataaataatcacacaaa--agcacataaaaacacatatt--aaacaattaaaaataaatctagcgaaa 17503034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 627 - 748
Target Start/End: Original strand, 23350997 - 23351116
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac-act 724  Q
    |||||||| ||||||| |||||||||||||||  ||||| ||||| ||||||||  ||||||||||||||||||||||||||| || | || |||| |||    
T  23350997 aaaatgcacccaatgacaaataatcacacaca--agcacttataaccacatatta-aaacaattaaaaataaatctagcgaaaatcgggctgttacaact 23351093  T
Q  725 ctcccccctaaaaagaattttcgc 748  Q
    || |||||||||||||||||||||    
T  23351094 ct-ccccctaaaaagaattttcgc 23351116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 24240380 - 24240462
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  24240380 cattaaaatgcacccaatgataaataat--cacacacaagcacataaaaacacatatt-aaaacaatt-aaaataaatctagcgaaa 24240462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 31590784 - 31590863
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||| |  |||||||||| |||||||||||||||||  |||||||||||||||| ||||||||||    
T  31590784 aaaatgcatccaatgataaatatt--cacacacaagtacatataaacacatatt-aaaacaattaaaaataattctagcgaaa 31590863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 628 - 709
Target Start/End: Complemental strand, 23223418 - 23223340
Alignment:
Q  628 aaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||| |||||||||| |||||||||| |  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  23223418 aaatgcacccaatgataattaatcacacaaa--agcacatataaacacatatta-aaacaattaaaaataaatctagcgaaa 23223340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 626 - 709
Target Start/End: Complemental strand, 45464583 - 45464503
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||| ||| ||||||||| |||||||||  || |||||||||||||||||  |||||||||||||||||||||||||||    
T  45464583 taaaatgcacccagtgataaatattcacacaca--agtacatataaacacatatta-aaacaattaaaaataaatctagcgaaa 45464503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 753
Target Start/End: Complemental strand, 23157724 - 23157599
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    |||||||| ||| |||||||||||||||||||  |||||| |||||||||| |||||   |||||||| |||||||||||||||||| || | || ||||    
T  23157724 cattaaaacgcacccaatgataaataatcaca--cacaagtacatataaactcatat--aaaacaatt-aaaataaatctagcgaaaatcgggctgttac 23157630  T
Q  722 actctcccccctaaaaagaattttcgctctcg 753  Q
    | ||| ||||||||||||||||| ||| ||||    
T  23157629 aatct-ccccctaaaaagaatttccgccctcg 23157599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 29307260 - 29307345
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    ||||||| ||||| |||||||||||||||  |||||||||||||||||||||| |||||  |||||||| ||||||||||||| |||||    
T  29307260 tcattaagatgcacccaatgataaataat--cacacacaagcacatataaacaaatatt-aaaacaattaaaaaataaatctaacgaaa 29307345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 626 - 709
Target Start/End: Original strand, 33172995 - 33173074
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||| ||||||||| |||||||||   |||||||||||||||||||||||  |||||||||||||||| |||| |||||    
T  33172995 taaaatgcacccaatgatatataatcaca---acaagcacatataaacacatatt-aaaacaattaaaaataattctaacgaaa 33173074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 709
Target Start/End: Original strand, 23159002 - 23159082
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||| ||||||||||||||||  ||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  23159002 taaaatgcacccaatgataaataatcttacac--aagcacatataaacacataat-aaaacaattaaaaataaatctaacgaaa 23159082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 25296986 - 25297066
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||  ||||||||| |||||||||||||||| |  |||||||| |||||||||||||||||||    
T  25296986 aaaatgcacccaatgataaataat--cacacacaaacacatataaacacataat-aaaacaattaaaaaataaatctagcgaaa 25297066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 25759006 - 25759086
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||  ||||||||| |||||||||||||||| |  |||||||| |||||||||||||||||||    
T  25759006 aaaatgcacccaatgataaataat--cacacacaaacacatataaacacataat-aaaacaattaaaaaataaatctagcgaaa 25759086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 23218649 - 23218727
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||   |||||| ||||||||||||||||||||  |||||||||||||| ||||||||||||    
T  23218649 aaaatgcacccaatgataaataat--tacacacgagcacatataaacacatatt-aaaacaattaaaaat-aatctagcgaaa 23218727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 24908575 - 24908658
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||| |||||| |||||||||||||||  |||||| ||| |||||||||||||||||  ||| ||||||||||||||||| |||||    
T  24908575 cattataatgcacccaatgataaataat--cacacataaggacatataaacacatatt-aaaataattaaaaataaatctaacgaaa 24908658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 24910796 - 24910879
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||| |||||| |||||||||||||||  |||||| ||| |||||||||||||||||  ||| ||||||||||||||||| |||||    
T  24910796 cattataatgcacccaatgataaataat--cacacataaggacatataaacacatatt-aaaataattaaaaataaatctaacgaaa 24910879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 26012260 - 26012339
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||| ||||  |||||||||||||| ||||||||||| |  ||||||||||||||||||||| |||||    
T  26012260 aaaatgcacccaatgataattaat--cacacacaagcacaaataaacacataat-aaaacaattaaaaataaatctaacgaaa 26012339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 33529250 - 33529332
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||| |||||||| |  ||||||||||||||||||  ||||||||| |||||||| ||||||||    
T  33529250 cattaaaatgca-ccaatgataaataaccacacacaaa--cacatataaacacatatt-aaaacaattataaataaatatagcgaaa 33529332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 18040986 - 18040931
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||    
T  18040986 cacacacaagcacatataaatacatatt-aaaacaattaaaaataattctagcgaaa 18040931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 21258914 - 21258858
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||| |||||||| |  |||||||||||||||||||| ||||||    
T  21258914 cacacacaagcacatatgaacacataataaaaacaattaaaaataaatcttgcgaaa 21258858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 23151250 - 23151169
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||| ||||||||||||||  |||||| |||||||||| |||||   |||||||| ||||||||||||||||||    
T  23151250 cattaaaatgcacccaacgataaataatcaca--cacaagtacatataaactcatat--aaaacaatt-aaaataaatctagcgaaa 23151169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 655 - 709
Target Start/End: Complemental strand, 27232491 - 27232439
Alignment:
Q  655 cacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||| |||||||||||  |||||||||||||||||||||| ||||    
T  27232491 cacacaagcacataaaaacacatatt--aaacaattaaaaataaatctagtgaaa 27232439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 628 - 709
Target Start/End: Original strand, 22745502 - 22745579
Alignment:
Q  628 aaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||| ||||||||||||||||| |||||  |||||||| | ||||||| |  |||||||||||||||||||||||||||    
T  22745502 aaatgcacccaatgataaataatcagacaca--agcacata-agacacataata-aaacaattaaaaataaatctagcgaaa 22745579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 39446167 - 39446086
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||| ||| ||| ||||||||||    |||||||||||||||| |  |||||||||||||||||||||||||||    
T  39446167 aaaatgcacccaaggatgaatgatcacacacaagcacacatataaacacataata-aaacaattaaaaataaatctagcgaaa 39446086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 703
Target Start/End: Complemental strand, 19330806 - 19330733
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    ||||||||  ||||||||||||||||| ||||  |||||||| |||||||||||  |||||||||||| ||||||||    
T  19330806 aaaatgcactcaatgataaataatcacgcaca--agcacatagaaacacatatt-aaaacaattaaaactaaatcta 19330733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 22221756 - 22221707
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  22221756 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacata 22221707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 22228098 - 22228049
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  22228098 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacata 22228049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 723
Target Start/End: Complemental strand, 22735257 - 22735194
Alignment:
Q  660 aagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga-ctattacac 723  Q
    ||||||||||||||||||| |  ||||||||||||||||||||| ||||| |||| |||||||||    
T  22735257 aagcacatataaacacataata-aaacaattaaaaataaatctaacgaaaatcgagctattacac 22735194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 24968751 - 24968668
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    ||||||||  ||||||||||||||   ||||||||  |||||||||||||||||  |||||||| |||||||||||||||||| ||||    
T  24968751 aaaatgcactcaatgataaataat--aacacacaacaacatataaacacatatt-aaaacaatt-aaaataaatctagcgaaaatcga 24968668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 26696082 - 26696027
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| ||||||||||||||| |  |||||||| ||||||||||||||||||    
T  26696082 cacacacaagtacatataaacacataataaaaacaatt-aaaataaatctagcgaaa 26696027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 38534497 - 38534573
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagc 705  Q
    ||||||||||||||||| ||| ||  ||||||||| |||||||||||||||| |  |||||||| |||||||||||||||    
T  38534497 aaaatgcatccaatgatgaatgat--cacacacaaacacatataaacacataat-aaaacaattaaaaaataaatctagc 38534573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 5855380 - 5855455
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||| ||| |||||||||| |||||| |||||  |||||| ||||||||||| |  |||||||||||||||||||||||    
T  5855380 aaaacgcacccaatgataattaatcaaacaca--agcacaaataaacacataata-aaacaattaaaaataaatctagc 5855455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 636 - 753
Target Start/End: Original strand, 23150634 - 23150752
Alignment:
Q  636 ccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaattc-gactattac-actct-ccccc 731  Q
    |||||||||||| |||| ||||  ||||||||||||||||||| |  |||||||| ||||||||||||| | ||| || | || |||| ||||| |||||    
T  23150634 ccaatgataaatgatcatacac--aagcacatataaacacataat-aaaacaattaaaaaataaatctaaccaaaatcgggctgttacaactctcccccc 23150730  T
Q  732 ctaaaaagaattttcgctctcg 753  Q
    ||||||||||||||||| ||||    
T  23150731 ctaaaaagaattttcgccctcg 23150752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 41506325 - 41506249
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||| ||||||||  |||||||||| |||||||||||    ||| |||||||||||| |||| |||||    
T  41506325 aaaatgcacccaatgataattaatcaca--cacaagcacaaataaacacata----aaataattaaaaataattctaacgaaa 41506249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 703
Target Start/End: Complemental strand, 31193747 - 31193675
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    |||||||| |||||||||| ||||||||  ||||||||||||||| |||||| |  |||||||| ||||||||||||    
T  31193747 aaaatgcacccaatgataattaatcaca--cacaagcacatataatcacataat-aaaacaatt-aaaataaatcta 31193675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 37651907 - 37651823
Alignment:
Q  627 aaaatgcatccaatgataaa-taatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||| ||||||||||| ||||||||||||  |||||| ||||||||||| |  |||||||| |||||||||||| ||||| ||||    
T  37651907 aaaatgcacccaatgataaaataatcacacaca--agcacaaataaacacataat-aaaacaatt-aaaataaatctaacgaaaatcga 37651823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 8e-23; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 15213041 - 15212958
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||| ||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  15213041 cattaaaatgcacccaatgataattaatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 15212958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 626 - 709
Target Start/End: Complemental strand, 7185289 - 7185209
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||| || |||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  7185289 taaaatacacccaatgataaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 7185209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 49072483 - 49072566
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||  ||| |||||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  49072483 cattaaaatgcacccaatgataaataat--cacgcacaagcagatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 49072566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 653 - 747
Target Start/End: Complemental strand, 37956425 - 37956330
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa-ttcgactattaca-ctctcccccctaaaaagaattttcg 747  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||||||| ||| || | || ||||| |||||||||||||||||||||||||    
T  37956425 cacacacaagcacatataaacacgtatta-aaacaattaaaaataaatctagcaaaaattgggctgttacaactctcccccctaaaaagaattttcg 37956330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 13589546 - 13589467
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||||||||||||| |||||||  ||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  13589546 aaaatgcacccaatgataaataataacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctagcgaaa 13589467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 714
Target Start/End: Original strand, 14902053 - 14902139
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatta--aaaataaatctagcgaaattcga 714  Q
    |||||||||||||| |||||||||  ||||||||||||||||||||||||||||  |||||||||  |||||||||||||||||| ||||    
T  14902053 aaaatgcatccaataataaataat--cacacacaagcacatataaacacatatt-aaaacaattaataaaataaatctagcgaaaatcga 14902139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 47467803 - 47467720
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| || | ||||||||||||||||||  |||||||| |||||||||||  |||||||||||||||| ||||||||||    
T  47467803 cattaaaatgcacccgacgataaataatcacacaca--agcacataaaaacacatatt-aaaacaattaaaaataattctagcgaaa 47467720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 623 - 680
Target Start/End: Complemental strand, 12133061 - 12133006
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatatt 680  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  12133061 cattaaaatgcacccaatgataaataatcaca--cacaagcacatataaacacatatt 12133006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 10375304 - 10375383
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||| | ||||||||||||| |||||  ||||||||||||||||||||||||  |||||||||||||||| |||| |||||    
T  10375304 aaaatgtacccaatgataaatattcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataattctaacgaaa 10375383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 30231925 - 30231846
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| ||| ||||||||||  |||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  30231925 aaaatgcacccaatgatgaatgatcacacaca--agcacatataaacacataat-aaaacaattaaaaataaatctagtgaaa 30231846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 722
Target Start/End: Complemental strand, 13438488 - 13438392
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    ||||||||||||  ||||||||||||||||||  ||||||||| || |||||||||||  |||||||| ||||||| |||||||||| || |||||||||    
T  13438488 cattaaaatgcactcaatgataaataatcaca--cacaagcacttaaaaacacatatt-aaaacaatt-aaaataattctagcgaaaatcggactattac 13438393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 18493513 - 18493457
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||||||| |  ||  |||||||||||||||||||||||    
T  18493513 cacacacaagcacatataaacacataataaaagtaattaaaaataaatctagcgaaa 18493457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 694
Target Start/End: Complemental strand, 40904387 - 40904319
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    ||||||||||||  ||||||||||||||||||  |||||||||||| |||||||||||  ||||||||||||    
T  40904387 cattaaaatgcacacaatgataaataatcaca--cacaagcacataaaaacacatatt-aaaacaattaaaa 40904319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 705
Target Start/End: Complemental strand, 41916197 - 41916146
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  41916197 cacacacaagcacatataaacacatatt-aaaacaattaaaaataattctagc 41916146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 19560154 - 19560236
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||  ||||||||||||||   |||||| |||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  19560154 cattaaaatgcactcaatgataaataat--tacacacgagcacatataaatacatatt-aaaacaattaaaaat-aatctagcgaaa 19560236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 27961798 - 27961873
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||| ||| |||| ||||  ||||||||||||||||||| |  |||||||||||||||||||||||    
T  27961798 aaaatgcacccaatgatgaatgatcatacac--aagcacatataaacacataat-aaaacaattaaaaataaatctagc 27961873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 15012713 - 15012636
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||  |||| ||||||||||| ||||| || |   ||||||||||||||||||||| |||||    
T  15012713 aaaatgcacccaatgataaataat--cacatacaagcacataaaaacatattt---aaacaattaaaaataaatctaacgaaa 15012636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 644 - 676
Target Start/End: Complemental strand, 6942912 - 6942880
Alignment:
Q  644 aaataatcacacacacaagcacatataaacaca 676  Q
    |||||||||||||||||||||||||||||||||    
T  6942912 aaataatcacacacacaagcacatataaacaca 6942880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 13722500 - 13722451
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  13722500 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacata 13722451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 18277203 - 18277278
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||||| |||||||| |||  || ||| ||||||||||| |  |||||||||||||||||||||||    
T  18277203 aaaatgcacccaatgataattaatcacataca--agtacaaataaacacataata-aaacaattaaaaataaatctagc 18277278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 31635463 - 31635416
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    |||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  31635463 aaaatgcacccaatgataaataatcaca--cacaagcacaaataaacaca 31635416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 623 - 711
Target Start/End: Complemental strand, 21215893 - 21215808
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaatt 711  Q
    |||||||||||| |||||| ||||||||||||||||  |||||||| |||||||||||  |||||||||||||||||||||||||||||    
T  21215893 cattaaaatgcacccaatggtaaataatcacacaca--agcacataaaaacacatatta-aaacaattaaaaataaatctagcgaaatt 21215808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 37984192 - 37984271
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||||||||||||||||||| |  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  37984192 aaaatgcacccaatgataaataatcacacata--agcacatataaacacatattt-aaacaattaaaaataaatctagcgaaa 37984271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 3674711 - 3674790
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||| ||||||||||  |||||||||||||||||| |  |||||||||||||||||||||||||||    
T  3674711 aaaatgcacccaatgataaatgatcacacaca--agcacatataaacacataata-aaacaattaaaaataaatctagcgaaa 3674790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 624 - 709
Target Start/End: Complemental strand, 11762951 - 11762870
Alignment:
Q  624 attaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||| |||||||||||||||||||  |||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  11762951 attaaaatgcacccaatgataaataatcaca--cacaagcacatagaaacacatatt-aaaacaatt-aaaataaatctagcgaaa 11762870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 21110545 - 21110623
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||| |  |||||||||| ||||||||||||||| |  |||||||||||||||||||||||||||    
T  21110545 aaaatgcatccaatgataaatatt--cacacacaag-acatataaacacataat-aaaacaattaaaaataaatctagcgaaa 21110623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 23233985 - 23233906
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||| ||||||| |||||||||  ||||||||||||||||||||  |||||||||||||||| |||| |||||    
T  23233985 aaaatgcatccaataataaatattcacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctaacgaaa 23233906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 26559252 - 26559195
Alignment:
Q  653 cacacacaagcacatataaacacatat-tggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  26559252 cacacacaagcacatataaacacatatattaaaacaattaaaaataaatctagcgaaa 26559195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 678
Target Start/End: Complemental strand, 5450243 - 5450190
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  5450243 cattaaaatgcacccaatgataaataatcaca--cacaagcacatataaacacata 5450190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 3420451 - 3420372
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||| |  ||||||||| ||  ||||||||||||||  |||||||||||||||||||||| ||||    
T  3420451 aaaatgcatccaatgataaatatt--cacacacaaacatgtataaacacatatt-aaaacaattaaaaataaatctagtgaaa 3420372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 16834772 - 16834694
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||||||  ||||||||||||| ||||||||||  |||||||||||||||  ||||||||||    
T  16834772 aaaatgcacccaatgataaataatcaca--cacaagcacatat-aacacatatt-aaaacaattaaaaatatttctagcgaaa 16834694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 19874530 - 19874609
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||| |||||||||||||||||  ||||||||| ||||||||||||||||||  ||| |||||||||||| || |||||||    
T  19874530 aaaatgtatccaatgataaataat--cacacacaaacacatataaacacatatt-aaaataattaaaaataattccagcgaaa 19874609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 698
Target Start/End: Original strand, 23418065 - 23418136
Alignment:
Q  624 attaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataa 698  Q
    ||||||||||| |||||| ||||||| ||||  ||||||||||||||||||||||||  ||||||||||||||||    
T  23418065 attaaaatgcacccaatggtaaataaccaca--cacaagcacatataaacacatatt-aaaacaattaaaaataa 23418136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 24084657 - 24084739
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||  ||| |||||||||||||||||||||| |  ||| |||| ||||||||||||||||||    
T  24084657 cattaaaatgcacccaatgataaataat--cacgcacaagcacatataaacacataat-aaaataatt-aaaataaatctagcgaaa 24084739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 6457420 - 6457503
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| | || ||||||||||  |||||||||||||||| |||||||||||  |||||||||||||||| |||| |||||    
T  6457420 tcattaaaatgcaccaaacgataaataat--cacacacaagcacata-aaacacatatt-aaaacaattaaaaataattctaacgaaa 6457503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 11966127 - 11966182
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||| ||||    
T  11966127 cacacacaagcacatataaacacatatt-aaaacaattaaaaataattctagtgaaa 11966182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 637 - 703
Target Start/End: Complemental strand, 5621231 - 5621168
Alignment:
Q  637 caatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    |||||||||||| ||||||| |  ||||||||||||||||||||  |||||||||||||||||||||    
T  5621231 caatgataaatattcacacaga--agcacatataaacacatatt-aaaacaattaaaaataaatcta 5621168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 23467280 - 23467359
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| ||| |||| ||||  ||||||||||||||||||| |  ||||||||||||||||||||| |||||    
T  23467280 aaaatgcacccaatgatgaatgatcatacac--aagcacatataaacacataat-aaaacaattaaaaataaatctaacgaaa 23467359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 714
Target Start/End: Original strand, 19349884 - 19349944
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    ||||||||||||||||||||| |||| |  |||||||| |||||||||||||||||| ||||    
T  19349884 cacacacaagcacatataaactcataata-aaacaattcaaaataaatctagcgaaaatcga 19349944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 22662086 - 22662030
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||    
T  22662086 cacacacaagcacatataaacacataat-aaaacaattaaaaaataaatctagcgaaa 22662030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 1167637 - 1167588
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    ||||||||||||||||| ||||||||||  ||||| ||||||||||||||||    
T  1167637 aaaatgcatccaatgatgaataatcaca--cacaaacacatataaacacata 1167588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 433279 - 433357
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||  ||||||| ||||||||||||||  ||||||||||| ||| || |  |||||||||||||||||||||||||||    
T  433279 aaaatgcactcaatgatgaataatcacacaca--agcacatataa-cacgtaata-aaacaattaaaaataaatctagcgaaa 433357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 7729268 - 7729347
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| |||| |||||||||  |||||| ||||||||| | |  ||| |||||||||||||||||||||||    
T  7729268 aaaatgcacccaatgatgaatattcacacaca--agcacaaataaacacacaata-aaataattaaaaataaatctagcgaaa 7729347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 16596318 - 16596393
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||||||||| || ||| ||  ||||||||| ||||||||||||| ||||  ||||| |||||||||||||||||    
T  16596318 aaaatgcatccaataatgaatgat--cacacacaaacacatataaacacgtatt-aaaacagttaaaaataaatctagc 16596393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 23980933 - 23980886
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    ||||||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  23980933 aaaatgcatccaatgatgaataatcaca--cacaaacacatataaacaca 23980886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 24224826 - 24224779
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    |||||||| |||||||||||||||||||  |||||||||| |||||||||    
T  24224826 aaaatgcacccaatgataaataatcaca--cacaagcacaaataaacaca 24224779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 53; Significance: 5e-21; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 25094653 - 25094735
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||  |||||||||||||||| | ||||||||    
T  25094653 cattaaaatgcatccaatgataaataat--cacacacaagcacaaataaacacatatt--aaacaattaaaaataattatagcgaaa 25094735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 22828844 - 22828765
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||| ||| |||||||||| |  |||||||||||||||| |  |||||||||||||||||||||||||||    
T  22828844 aaaatgcatccaatgatgaatgatcacacacaaa--cacatataaacacataata-aaacaattaaaaataaatctagcgaaa 22828765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 725
Target Start/End: Original strand, 16646760 - 16646856
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattacactc 725  Q
    |||||||| ||||| ||||||||||||| |||  ||||||||||||||||||||  ||| |||||||||||||||||| |||| || |||| ||||||||    
T  16646760 aaaatgcacccaatcataaataatcacagaca--agcacatataaacacatatt-aaaataattaaaaataaatctagggaaaatcggactgttacactc 16646856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 5470445 - 5470363
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||| ||||||  |||||||||||||||| ||||| |||||  |||||||||||||||| || |||||||    
T  5470445 cattaaaatgcatccaatgat-aataat--cacacacaagcacataaaaacatatatt-aaaacaattaaaaataactccagcgaaa 5470363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 18851872 - 18851790
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| | |||||||||| ||||| ||||  || | ||||||||||||||||  ||||||||||||||| ||||||||||    
T  18851872 cattaaaatgcagcaaatgataaattatcacgcaca--agtatatataaacacatattg--aacaattaaaaataattctagcgaaa 18851790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 17609698 - 17609777
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||| ||||| ||||||  |||||| ||||||||||| |  |||||||||||||||||||| ||||||    
T  17609698 aaaatgcacccaatgataattaatcgcacaca--agcacaaataaacacataata-aaacaattaaaaataaatctcgcgaaa 17609777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 654 - 709
Target Start/End: Complemental strand, 36355666 - 36355612
Alignment:
Q  654 acacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||  ||||  |||||||||||||||||||||||||||    
T  36355666 acacacaagcacatataaacatgtatta-aaacaattaaaaataaatctagcgaaa 36355612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 38033102 - 38033023
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||  ||||||||||||||||||  ||||| ||||||||||||| || |  |||||||||||||||||| ||||||||    
T  38033102 aaaatgcactcaatgataaataatcaca--cacaaacacatataaacacgtact-aaaacaattaaaaataaatttagcgaaa 38033023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 52401394 - 52401476
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||| ||||||||||  ||| |||||||||||| ||||||||| |  ||||||||||||||||||||| |||||    
T  52401394 cattaaaatgcacccaacgataaataat--cacgcacaagcacata-aaacacata-tcaaaacaattaaaaataaatctaacgaaa 52401476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 709
Target Start/End: Original strand, 20839158 - 20839239
Alignment:
Q  624 attaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||| ||||| |||||||||  |||||||||||||||| |||||||||||  ||| |||| ||||||| ||||||||||    
T  20839158 attaaaatgcacccaatcataaataat--cacacacaagcacataaaaacacatatt-aaaataatt-aaaataattctagcgaaa 20839239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 653 - 753
Target Start/End: Original strand, 33398141 - 33398241
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac-actctcccccctaaaaagaattttcgctc 750  Q
    |||||||||||||||||| |||||||||  |||||||||| ||||| |||||||||| || |  | |||| ||||| ||||||||||||||||||||| |    
T  33398141 cacacacaagcacatatatacacatatt-aaaacaattaagaataattctagcgaaaatcgggatgttacaactct-ccccctaaaaagaattttcgccc 33398238  T
Q  751 tcg 753  Q
    |||    
T  33398239 tcg 33398241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 694
Target Start/End: Complemental strand, 75870 - 75801
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    ||||||||||||  |||||||||||||| |||||||  |||||||| |||||| ||||  ||||||||||||    
T  75870 cattaaaatgcactcaatgataaataattacacaca--agcacatagaaacacgtatttaaaacaattaaaa 75801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 65
Target Start/End: Complemental strand, 42664689 - 42664653
Alignment:
Q  29 ttcaacaaaatcacgatgctaccgtgattttgtcaaa 65  Q
    ||||||||||||||| |||||||||||||||||||||    
T  42664689 ttcaacaaaatcacggtgctaccgtgattttgtcaaa 42664653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 658 - 709
Target Start/End: Original strand, 19603966 - 19604016
Alignment:
Q  658 acaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||| |||||||||||||||| |  |||||||||||||||||||||||||||    
T  19603966 acaatcacatataaacacataata-aaacaattaaaaataaatctagcgaaa 19604016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 629 - 678
Target Start/End: Complemental strand, 22402511 - 22402463
Alignment:
Q  629 aatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||| |||||||| ||||||||||||||||| |||||| |||||||||    
T  22402511 aatgcacccaatgatgaataatcacacacacaaacacata-aaacacata 22402463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 625 - 709
Target Start/End: Complemental strand, 38375146 - 38375065
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||  ||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  38375146 ttaaaatgcactcaatgataaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctagcgaaa 38375065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 8605638 - 8605721
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  8605638 tcattaaaatgcacccaatgataaataat--cacacacaagcacataaaaacacatatt-aaaacaatt-aaaataaatctagcgaaa 8605721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 17758145 - 17758070
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||||||    
T  17758145 aaaatgcacccaatgataaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctagc 17758070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 19059465 - 19059390
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||||||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||||||    
T  19059465 aaaatgcacccaatgataaataatcacacaca--agcacatataaacacatatt-aaaacaattaaaaataattctagc 19059390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 39657369 - 39657448
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| ||| ||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  39657369 aaaatgcacccaatgatgaatgatcaca--cacaagcacatataaacacatatt-aaaacaattaaaaataaatctagcgaaa 39657448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 621 - 705
Target Start/End: Complemental strand, 9590166 - 9590086
Alignment:
Q  621 ttcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||  ||| |||| ||||||||||||||    
T  9590166 ttcattaaaatgcatccaatgataaataatcaca--cacaagcacatgtaaacacatatt-aaaataatt-aaaataaatctagc 9590086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 43426988 - 43426910
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| | |||||||||||||||||| ||  ||||||||||||||||||||  |||||||||||||||| ||||||||||    
T  43426988 aaaatgcaccaaatgataaataatcacacgca--agcacatataaacacatatt--aaacaattaaaaataattctagcgaaa 43426910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 25103442 - 25103360
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||| ||||| |||||||||||||||||||  |||||||||||| |||||||||||  |||||||| ||||||||||||||||||    
T  25103442 cattaatatgcacccaatgataaataatcaca--cacaagcacataaaaacacatatt-aaaacaatt-aaaataaatctagcgaaa 25103360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 623 - 695
Target Start/End: Original strand, 9150135 - 9150204
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaa 695  Q
    ||||||||| || |||||||||||||||  ||||||||||||||||||||||||||||  |||||||||||||    
T  9150135 cattaaaatacacccaatgataaataat--cacacacaagcacatataaacacatatt-aaaacaattaaaaa 9150204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 18970709 - 18970793
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    ||||||||||||||| ||||| |||||||  |||||||||||||||| |||||||||||  |||||||| |||||||||||||||||||    
T  18970709 tcattaaaatgcatctaatgacaaataat--cacacacaagcacata-aaacacatatt-aaaacaattaaaaaataaatctagcgaaa 18970793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 653 - 705
Target Start/End: Complemental strand, 12487176 - 12487124
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||    
T  12487176 cacacacaagcacatataaacacataataaaaacaattaaaaataaatctagc 12487124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 705
Target Start/End: Complemental strand, 13300872 - 13300796
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    ||||||||| |||||| | ||||||||||||||  ||||||| ||||||||||||  |||||||||||||||||||||||    
T  13300872 taaaatgcacccaatggttaataatcacacaca--agcacatgtaaacacatatt-aaaacaattaaaaataaatctagc 13300796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 626 - 705
Target Start/End: Complemental strand, 13311528 - 13311452
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    ||||||||| |||||| | ||||||||||||||  ||||||| ||||||||||||  |||||||||||||||||||||||    
T  13311528 taaaatgcacccaatggttaataatcacacaca--agcacatgtaaacacatatt-aaaacaattaaaaataaatctagc 13311452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 17586359 - 17586277
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| ||||  |||||||||||||  |||||||||||| |||||||||||  |||||||||||||||| ||||||||||    
T  17586359 cattaaaatgcacccaacaataaataatcaca--cacaagcacata-aaacacatatt-aaaacaattaaaaataattctagcgaaa 17586277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 33368412 - 33368330
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||| ||||||||||||  |||||| ||||||||||| |  ||||||||||||||||||||| |||||    
T  33368412 cattaaaatgcacccaatgataa-taatcacacaca--agcacaaataaacacataata-aaacaattaaaaataaatctaacgaaa 33368330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 40939971 - 40940050
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| ||| ||||||  |||||||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  40939971 aaaatgcacccaatgatgaatgatcaca--cacaagcacatataaacacataat-aaaacaattaaaaataaatctagtgaaa 40940050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 698
Target Start/End: Original strand, 10913680 - 10913752
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataa 698  Q
    |||||||||||| ||||||| |||||||  |||||||||||| || ||||||||||||  ||||||||||||||||    
T  10913680 cattaaaatgcacccaatgaaaaataat--cacacacaagcatatgtaaacacatatt-aaaacaattaaaaataa 10913752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 15521788 - 15521868
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    ||||||||| ||||||||| ||||  |||||||||||||| |||||| ||||||  |||||||| |||||||||||||||||||    
T  15521788 aaaatgcattcaatgataattaat--cacacacaagcacaaataaacgcatatt-aaaacaattaaaaaataaatctagcgaaa 15521868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 705
Target Start/End: Complemental strand, 31411091 - 31411040
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    ||||||||||||||||||||||||||||  |||||||||||||||| ||||||    
T  31411091 cacacacaagcacatataaacacatatt-aaaacaattaaaaataattctagc 31411040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 11403397 - 11403480
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||  |||||| ||| ||||||||||| |||||  |  ||||||||||| ||||||||||||    
T  11403397 cattaaaatgcacccaatgataaataat--cacacagaagaacatataaacatatatt-aaggcaattaaaaattaatctagcgaaa 11403480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 677
Target Start/End: Complemental strand, 12348714 - 12348666
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacat 677  Q
    ||||||||||||||||| ||||||||||  |||||||||||||||||||||    
T  12348714 aaaatgcatccaatgatgaataatcaca--cacaagcacatataaacacat 12348666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 637 - 703
Target Start/End: Complemental strand, 21166518 - 21166455
Alignment:
Q  637 caatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    |||||||||||| ||||||| |  ||||||||||||||||||||  |||||||||||||||||||||    
T  21166518 caatgataaatattcacacaga--agcacatataaacacatatt-aaaacaattaaaaataaatcta 21166455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 40038382 - 40038299
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||   ||||||||||||| ||||| |||||||  ||||||| |||| ||||| ||||||||    
T  40038382 cattaaaatgcaaccaatgataaataat--aacacacaagcacacataaatacatatt-aaaacaatcaaaattaaatttagcgaaa 40038299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 709
Target Start/End: Original strand, 14081352 - 14081400
Alignment:
Q  660 aagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||||    
T  14081352 aagcacatataaacacataata-aaacaattaaaaataaatctagcgaaa 14081400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 698
Target Start/End: Complemental strand, 11514959 - 11514887
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataa 698  Q
    |||||||||||| | |||||||||||||||||  ||||| |||||||||| | |||||  ||||||||||||||||    
T  11514959 cattaaaatgcaccaaatgataaataatcaca--cacaaacacatataaatatatatt-aaaacaattaaaaataa 11514887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 628 - 703
Target Start/End: Original strand, 34560625 - 34560697
Alignment:
Q  628 aaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    ||||||| |||||||||| ||||||||| ||  |||||||| ||||||||| |  |||||||||||||||||||||    
T  34560625 aaatgcacccaatgataattaatcacactca--agcacataaaaacacataata-aaacaattaaaaataaatcta 34560697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 38810388 - 38810333
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| ||||||||||||| |  ||||||||||||||||||||| |||||    
T  38810388 cacacacaagcatatataaacacataata-aaacaattaaaaataaatctaacgaaa 38810333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Complemental strand, 50111473 - 50111424
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||||    
T  50111473 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacata 50111424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 11328386 - 11328306
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| | |||||||| |||  |||||| ||||||||| | |  ||| |||||||||||||||||||||||    
T  11328386 aaaatgcaaccaatgatgactaatcacataca--agcacaaataaacacacaataaaaataattaaaaataaatctagcgaaa 11328306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 17140335 - 17140410
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||| ||| ||||||  |||||||| ||||||||||||| |  |||||||||||||||||| ||||    
T  17140335 aaaatgcacccaatgatgaatgatcaca--cacaagcaaatataaacacataat-aaaacaattaaaaataaatatagc 17140410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 658
Target Start/End: Original strand, 19947530 - 19947561
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacaca 658  Q
    ||||||||||||||||||||||||||||||||    
T  19947530 aaaatgcatccaatgataaataatcacacaca 19947561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 628 - 709
Target Start/End: Complemental strand, 12559641 - 12559563
Alignment:
Q  628 aaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||| |||||||  |||||||||| |||  |||||||||||||||||| |  ||| |||| ||||||||||||||||||    
T  12559641 aaatgcacccaatgacgaataatcacataca--agcacatataaacacataataaaaaaaatt-aaaataaatctagcgaaa 12559563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 631 - 676
Target Start/End: Original strand, 13836455 - 13836498
Alignment:
Q  631 tgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||    
T  13836455 tgcatccaatgatgaataat--cacacacaagcacatataaacaca 13836498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 709
Target Start/End: Complemental strand, 11060378 - 11060330
Alignment:
Q  660 aagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||| |  |||||||||||||||||||||| ||||    
T  11060378 aagcacatataaacacataata-aaacaattaaaaataaatctagtgaaa 11060330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 627 - 753
Target Start/End: Original strand, 17192336 - 17192461
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcg-aaattcgactattac-act 724  Q
    ||||||||  ||||||||| ||||  ||||||||| |||| ||||||||| | |  ||| |||||||||||| |||| || ||||| | ||||||| |||    
T  17192336 aaaatgcactcaatgataattaat--cacacacaaccacaaataaacacacaat-aaaataattaaaaataattctaacgaaaattaggctattactact 17192432  T
Q  725 ctcccccctaaaaagaattttcgctctcg 753  Q
    ||||| | |||||||||||||||| ||||    
T  17192433 ctccctcataaaaagaattttcgccctcg 17192461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 1e-18; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 709
Target Start/End: Original strand, 19660725 - 19660805
Alignment:
Q  626 taaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||| |||||||||||||||  ||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||    
T  19660725 taaaatgcacccaatgataaataat--cacacacaagcacatataaatgcatatt-aaaacaattaaaaataaatctagcgaaa 19660805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 11010475 - 11010558
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| |||||||||||||||  ||| |||||| ||||||||||||||||||  |||||||||||||||  |||||||||    
T  11010475 tcattaaaatgcacccaatgataaataat--cacgcacaagtacatataaacacatattg--aacaattaaaaataatcctagcgaaa 11010558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 625 - 709
Target Start/End: Original strand, 19667370 - 19667451
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| |||||||||| ||||  ||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||||    
T  19667370 ttaaaatgcacccaatgataattaat--cacacacaagcacatataagcacatatt-aaaacaagtaaaaataaatctagcgaaa 19667451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 43646685 - 43646762
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||||||   |  |||||||||||||||||||||||||||    
T  43646685 aaaatgcacccaatgataaataat--cacacacaagcacatataaacaca---ttaaaacaattaaaaataaatctagcgaaa 43646762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 16292277 - 16292194
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||| ||||||||||||||  |||||||||||| |||||||| ||  |||||||| ||||||||||||||||||    
T  16292277 cattaaaatgcacccaacgataaataatcaca--cacaagcacataaaaacacatgtt-aaaacaattgaaaataaatctagcgaaa 16292194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 623 - 704
Target Start/End: Original strand, 24841705 - 24841782
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctag 704  Q
    ||||||| ||||||||||||||||||||  |||||||||||||||| |||||||||||  |||||||| |||||||||||||    
T  24841705 cattaaattgcatccaatgataaataat--cacacacaagcacataaaaacacatatt-aaaacaatt-aaaataaatctag 24841782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 627 - 714
Target Start/End: Complemental strand, 19433231 - 19433147
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    ||||||||||||||||| ||| ||||||||||  ||||| ||||| |||||| |  ||||||||||||||||||||||||||| ||||    
T  19433231 aaaatgcatccaatgatgaatgatcacacaca--agcacctataagcacataata-aaacaattaaaaataaatctagcgaaaatcga 19433147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 714
Target Start/End: Original strand, 24278554 - 24278642
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||||||| |||| ||||||||||  |||||||||| ||||| |||||||||||  |||||||||||||||| || ||||||| ||||    
T  24278554 cattaaaatgcacccaacgataaataat--cacacacaagtacataaaaacacatatt-aaaacaattaaaaataattcaagcgaaaatcga 24278642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 68818 - 68897
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||| ||| ||||||||||  ||||||| |||||||||| |  |||||||||||||||||||||||||||    
T  68818 aaaatgcacccaatgatgaatgatcacacaca--agcacatttaaacacataata-aaacaattaaaaataaatctagcgaaa 68897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 9638202 - 9638281
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||| |||||||||  |||||||||| |||||||||||||||||  |||||||||||||||| | ||||||||    
T  9638202 aaaatgcacccaataataaataat--cacacacaagtacatataaacacatatt-aaaacaattaaaaataattttagcgaaa 9638281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 24885483 - 24885568
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||| ||||||     | ||||||||||||| |  |||||||||||||||||||||||||||    
T  24885483 cattaaaatgcacccaatgataaataatcgcacacaagcatatatataaacacataata-aaacaattaaaaataaatctagcgaaa 24885568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 723237 - 723292
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||| || |  |||||||||||||||||||||||||||    
T  723237 cacacacaagcacatataaacacgtaata-aaacaattaaaaataaatctagcgaaa 723292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 25595815 - 25595897
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||| ||||||||||||||||  |||||| || || |||||||||||||||  |||||||| ||||||| ||||||||||    
T  25595815 cattaaaatgcgtccaatgataaataat--cacacataaacagatataaacacatatt-aaaacaatt-aaaataattctagcgaaa 25595897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 23836113 - 23836066
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    ||||||||||||||||| ||||||||||  ||||||||||||||||||||    
T  23836113 aaaatgcatccaatgatgaataatcaca--cacaagcacatataaacaca 23836066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 16446573 - 16446652
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaa-ttaaaaataaatctagcgaaa 709  Q
    ||||||||  |||||||||||| |||||  ||||||||| |||||||||||||   |||||| |||||||||||||||||||||    
T  16446573 aaaatgcacacaatgataaatattcaca--cacaagcacgtataaacacatat--aaaacaatttaaaaataaatctagcgaaa 16446652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 714
Target Start/End: Original strand, 7322355 - 7322438
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||| ||| || |  |||||||||||| |||||||||||||| ||||    
T  7322355 aaaatgcacccaatgatgaataatcacacaca--agcacatataa-cacgtaata-aaacaattaaaattaaatctagcgaaaatcga 7322438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 22579303 - 22579221
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt---aaaaataaatctagcgaaa 709  Q
    ||||||||||||||||| ||| || |||||||  |||||||||||||||||| |  ||||||||   |||||||||||||||||||    
T  22579303 aaaatgcatccaatgatgaatgattacacaca--agcacatataaacacataat-aaaacaattaaaaaaaataaatctagcgaaa 22579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 24086854 - 24086774
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||| ||||||||  |||||||||| |||||| ||||||  ||| |||| |||||||||||||||||||    
T  24086854 aaaatgcacccaatgataattaatcaca--cacaagcacaaataaacgcatatt-aaaataattaaaaaataaatctagcgaaa 24086774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 694
Target Start/End: Complemental strand, 4447539 - 4447473
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaa 694  Q
    |||||||||| |||||| ||||||||||||||||| |||||| |||||| ||||  ||| ||||||||    
T  4447539 aaaatgcatcaaatgatgaataatcacacacacaaacacata-aaacacttattaaaaataattaaaa 4447473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 680
Target Start/End: Original strand, 29115167 - 29115221
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatatt 680  Q
    |||||||||||| | |||||||||||||  |||||||||||||||| |||||||||||    
T  29115167 cattaaaatgcacctaatgataaataat--cacacacaagcacata-aaacacatatt 29115221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 653 - 748
Target Start/End: Complemental strand, 1691 - 1596
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcgactatta-cactct-cccccctaaaaagaattttcgc 748  Q
    |||||| ||||||||||||||||||| |  ||||||||||||||||||||||||||||| | || |||  ||||| ||||||||||||||||||||||    
T  1691 cacacagaagcacatataaacacataat--aaacaattaaaaataaatctagcgaaattgggctgttataactctccccccctaaaaagaattttcgc 1596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1932 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold1932
Description:

Target: scaffold1932; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 623 - 698
Target Start/End: Complemental strand, 829 - 758
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataa 698  Q
    |||||||||||||||||||| |||||||||||  |||||||||||||||||||||||   ||||||||||||||||    
T  829 cattaaaatgcatccaatgacaaataatcaca--cacaagcacatataaacacatat--aaaacaattaaaaataa 758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 46; Significance: 8e-17; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 623 - 737
Target Start/End: Original strand, 7180 - 7293
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattc-gactattac 721  Q
    |||||||||||| |||| ||||||||||  |||||||||||||||| ||||||||| |  |||||||||||||||| |||||||||| || | || ||||    
T  7180 cattaaaatgcacccaacgataaataat--cacacacaagcacataaaaacacataat-aaaacaattaaaaataactctagcgaaaatcgggctgttac 7276  T
Q  722 -actctcccccctaaaa 737  Q
     ||||||||||||||||    
T  7277 aactctcccccctaaaa 7293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 2395 - 2316
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||  |||||||||||||||| ||||||||||    
T  2395 aaaatgcacccaatgataaatattcacacacaaa--cacatataaacacatatt-aaaacaattaaaaataattctagcgaaa 2316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 6480 - 6397
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||||||  |||||||||||||||||||||| |  |||| ||||||||||||| | ||||||    
T  6480 cattaaaatgcacccaatgataaataatcaca--cacaagcacatataaacacataat-aaaactattaaaaataaatttggcgaaa 6397  T

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Target: scaffold0385 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 709
Target Start/End: Complemental strand, 12082 - 11998
Alignment:
Q  621 ttcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||  ||||||||||||||  ||| |||||||||||||||| |||||||  |||||||||||||| ||||||||||||    
T  12082 ttcattaaaatgcactcaatgataaataat--cacgcacaagcacatataaagacatatt-aaaacaattaaaaat-aatctagcgaaa 11998  T

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Target: scaffold0165 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 625 - 705
Target Start/End: Original strand, 30757 - 30834
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||||| |||| ||||||||||  |||||||||||||||| |||||||||||  |||||||||||||| ||||||||    
T  30757 ttaaaatgcacccaacgataaataat--cacacacaagcacataaaaacacatatt-aaaacaattaaaaattaatctagc 30834  T

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Target: scaffold0032 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 104025 - 103941
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||| ||||||||  ||||||||||||||||||| ||||  ||| |||| |||||||||||||||||||    
T  104025 cattaaaatgcacccaatgataattaatcaca--cacaagcacatataaacacttatt-aaaataattaaaaaataaatctagcgaaa 103941  T

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Target: scaffold0406 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0406
Description:

Target: scaffold0406; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 14809 - 14888
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| | ||||||||||| |||||  ||||||||||||||||||||||||  ||||||||||||| || ||||||||||    
T  14809 aaaatgcaccaaatgataaatattcaca--cacaagcacatataaacacatatt-aaaacaattaaaaaaaattctagcgaaa 14888  T

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Target: scaffold0149 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 658 - 709
Target Start/End: Complemental strand, 32793 - 32743
Alignment:
Q  658 acaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32793 acaagcacatataaacacatatta-aaacaattaaaaataaatctagcgaaa 32743  T

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Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 6641 - 6720
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| |||||||||||||||||||       |||||||||||||||||||  ||||||||||||||||||||| |||||    
T  6641 cattaaaatgcacccaatgataaataatcacag------gcacatataaacacatatta-aaacaattaaaaataaatctatcgaaa 6720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 32876 - 32793
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||  | |||||||||||||||||||||||  ||||||||||||||||||||  || ||||||||||||| |||| |||||    
T  32876 cattaaaatatacccaatgataaataatcacacaca--agcacatataaacacatatt-aaatcaattaaaaataattctaccgaaa 32793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 196730 - 196651
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| ||||||||||  |||||||||||  |||||| ||||||||||| |  |||||||||||||||||||||||||||    
T  196730 aaaatgcacccaatgataataaatcacacaca--agcacaaataaacacataata-aaacaattaaaaataaatctagcgaaa 196651  T

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Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 625 - 709
Target Start/End: Complemental strand, 328 - 247
Alignment:
Q  625 ttaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||| |||||||||||||||||||  |||||||||||||| ||| ||| |  |||||||||| ||||| ||||||||||    
T  328 ttaaaatgcacccaatgataaataatcaca--cacaagcacatatatacaaata-taaaaacaattaataataattctagcgaaa 247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 703
Target Start/End: Complemental strand, 26448 - 26372
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    |||||||||| | |||| ||||||||||||||  |||||||||||| |||||||||||  |||||||||||||||||||||    
T  26448 cattaaaatgtacccaacgataaataatcaca--cacaagcacata-aaacacatatt-aaaacaattaaaaataaatcta 26372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Complemental strand, 9489 - 9434
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||||||||||||| |  |||||| ||||||||||||||||||||    
T  9489 cacacacaagcacatataaacacataat-aaaacaaataaaaataaatctagcgaaa 9434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 623 - 709
Target Start/End: Complemental strand, 411 - 327
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaatt-aaaaataaatctagcgaaa 709  Q
    |||||||||| |||||| ||||||||||||  |||| ||||||||| |||||||||||  |||||||| ||||||||||||| |||||    
T  411 cattaaaatgtatccaacgataaataatca--cacaaaagcacatagaaacacatatt-aaaacaattaaaaaataaatctaacgaaa 327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0342 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 13138 - 13193
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||    
T  13138 cacacacaagcacatataaacacgtatt-aaaacaattagaaataaatctagcgaaa 13193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 86324 - 86408
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||| ||||||| |||| ||| ||||||||||||||  |||||||| ||||||||| |  ||||||||||||||||||||| |||||    
T  86324 tcatttaaatgcacccaacgatgaataatcacacaca--agcacataaaaacacataata-aaacaattaaaaataaatctaacgaaa 86408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 627 - 753
Target Start/End: Complemental strand, 10972 - 10846
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc--gaaattcgactattac-ac 723  Q
    |||||||| |||||||| ||||||||||||||  |||||||||||||||| | |  ||  |||| ||||||||||||||   ||||| | |  |||| ||    
T  10972 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacacacaataaaagtaatt-aaaataaatctagctaaaaattgggccgttacaac 10876  T
Q  724 tctcccccctaaaaagaattttcgctctcg 753  Q
    ||||||||||||||||||||||||| ||||    
T  10875 tctcccccctaaaaagaattttcgccctcg 10846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 33129 - 33048
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||| ||| ||| ||||||||||    |||||||||||||||| |  |||||||||||||||||||||||||||    
T  33129 aaaatgcacccaaggatgaatgatcacacacaagcacacatataaacacataata-aaacaattaaaaataaatctagcgaaa 33048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 623 - 703
Target Start/End: Original strand, 6211 - 6287
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatcta 703  Q
    |||||||||| | |||| ||||||||||  |||||||| ||||||| |||||||||||  |||||||||||||||||||||    
T  6211 cattaaaatgtacccaacgataaataat--cacacacatgcacata-aaacacatatt-aaaacaattaaaaataaatcta 6287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 622 - 678
Target Start/End: Original strand, 22337 - 22391
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||| |||||||| |||||||| ||||||||||  ||||||||||||||||||||||    
T  22337 tcatgaaaatgcacccaatgatgaataatcaca--cacaagcacatataaacacata 22391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0669 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0669
Description:

Target: scaffold0669; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 674
Target Start/End: Complemental strand, 2947 - 2898
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaaca 674  Q
    |||||||||||| |||||||||||||||||||  ||||| ||||||||||||    
T  2947 cattaaaatgcacccaatgataaataatcaca--cacaaacacatataaaca 2898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 5393 - 5448
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||||||| ||||||||| ||||  ||||||||||||||||||||| |||||    
T  5393 cacacacaagcacgtataaacacgtatta-aaacaattaaaaataaatctaacgaaa 5448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 653 - 709
Target Start/End: Original strand, 11745 - 11800
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||||||  ||||||||| |  |||||||||||||||||||||||||||    
T  11745 cacacacaagcacattcaaacacataata-aaacaattaaaaataaatctagcgaaa 11800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 30927 - 30976
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||||||    
T  30927 aaaatgcacccaatgatgaataatcaca--cacaagcacatataaacacata 30976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 627 - 678
Target Start/End: Original strand, 15676 - 15725
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    |||||||| |||||||| ||||||||||  ||||||||||||||||||||||    
T  15676 aaaatgcacccaatgatgaataatcaca--cacaagcacatataaacacata 15725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 623 - 678
Target Start/End: Original strand, 165050 - 165103
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    ||||||||||||| ||||||| ||||||  ||||||||| ||||||||||||||||    
T  165050 cattaaaatgcattcaatgatgaataat--cacacacaaacacatataaacacata 165103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1092 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1092
Description:

Target: scaffold1092; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 628 - 678
Target Start/End: Complemental strand, 2592 - 2544
Alignment:
Q  628 aaatgcatccaatgataaataatcacacacacaagcacatataaacacata 678  Q
    ||||||| ||||||| |||||||||||||||  ||||||||||||||||||    
T  2592 aaatgcacccaatgacaaataatcacacaca--agcacatataaacacata 2544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0876 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0876
Description:

Target: scaffold0876; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Original strand, 605 - 679
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| |||||||||||||||  |||||||||||||||| ||||||||| |  ||| |||| ||||||||||||||    
T  605 aaaatgcacccaatgataaataat--cacacacaagcacata-aaacacataataaaaataatt-aaaataaatctagc 679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 3295 - 3374
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    ||||||||  ||||||||||||||  |||||||||||||| ||||||||||| |  || |||||||||||| ||||| |||||    
T  3295 aaaatgcacacaatgataaataat--cacacacaagcacaaataaacacataat-aaaccaattaaaaatagatctaacgaaa 3374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 722 - 753
Target Start/End: Complemental strand, 11947 - 11916
Alignment:
Q  722 actctcccccctaaaaagaattttcgctctcg 753  Q
    ||||||||||||||||||||||||||||||||    
T  11947 actctcccccctaaaaagaattttcgctctcg 11916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 658
Target Start/End: Original strand, 16711 - 16746
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacaca 658  Q
    |||||||||||| |||||||||||||||||||||||    
T  16711 cattaaaatgcacccaatgataaataatcacacaca 16746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 705
Target Start/End: Complemental strand, 21814 - 21740
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagc 705  Q
    |||||||| || |||||||||||| |||||||  ||||||||||| ||| ||||  |||||||||||||||||||||||    
T  21814 aaaatgcaccccatgataaataataacacaca--agcacatataa-cacctatta-aaacaattaaaaataaatctagc 21740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 677
Target Start/End: Original strand, 38356 - 38404
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacat 677  Q
    |||||||||||||||||||||| |  |||||||||||||||| ||||||||    
T  38356 aaaatgcatccaatgataaatatt--cacacacaagcacataaaaacacat 38404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Complemental strand, 23163 - 23085
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||| | |||||||||||||||||||  |||||||||| ||||||||||| |  |||||||| |||||||||||| |||||    
T  23163 aaaatgtacccaatgataaataatcaca--cacaagcacaaataaacacataat-aaaacaatt-aaaataaatctaacgaaa 23085  T

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Target: scaffold0047 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 658
Target Start/End: Complemental strand, 19378 - 19343
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacaca 658  Q
    |||||||||||| |||||||||||||||||||||||    
T  19378 cattaaaatgcacccaatgataaataatcacacaca 19343  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 623 - 709
Target Start/End: Original strand, 80381 - 80463
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||||||| | |||||||||||||  ||||||||||||||||||||  ||||||  ||||||||  ||||||||||| |||||    
T  80381 cattaaaatgcaccgaatgataaataat--cacacacaagcacatataaatgcatatt-aaaacaatt-caaataaatctaacgaaa 80463  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 627 - 709
Target Start/End: Original strand, 70256 - 70335
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaa 709  Q
    |||||||| |||||||||| ||||  |||||||||||||| ||||||||| | |  ||| |||||||||||||| ||||||||    
T  70256 aaaatgcacccaatgataattaat--cacacacaagcacaaataaacacacaat-aaaataattaaaaataaatatagcgaaa 70335  T

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Target: scaffold0452 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 624 - 658
Target Start/End: Complemental strand, 2236 - 2202
Alignment:
Q  624 attaaaatgcatccaatgataaataatcacacaca 658  Q
    |||||||||||||||||||||| ||||||||||||    
T  2236 attaaaatgcatccaatgataattaatcacacaca 2202  T

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Target: scaffold0138 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 623 - 676
Target Start/End: Complemental strand, 21832 - 21781
Alignment:
Q  623 cattaaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    |||||||||||| |||||||||| ||||||||  |||||||||||| |||||||    
T  21832 cattaaaatgcacccaatgataattaatcaca--cacaagcacataaaaacaca 21781  T

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Target: scaffold0035 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 108868 - 108821
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||    
T  108868 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacaca 108821  T

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Target: scaffold0035; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 627 - 676
Target Start/End: Complemental strand, 117369 - 117322
Alignment:
Q  627 aaaatgcatccaatgataaataatcacacacacaagcacatataaacaca 676  Q
    |||||||| |||||||| ||||||||||||||  ||||||||||||||||    
T  117369 aaaatgcacccaatgatgaataatcacacaca--agcacatataaacaca 117322  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 652
Target Start/End: Complemental strand, 180344 - 180314
Alignment:
Q  622 tcattaaaatgcatccaatgataaataatca 652  Q
    |||||||||||||||||||||||||||||||    
T  180344 tcattaaaatgcatccaatgataaataatca 180314  T

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Target: scaffold0058 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 653 - 714
Target Start/End: Complemental strand, 69713 - 69653
Alignment:
Q  653 cacacacaagcacatataaacacatattggaaacaattaaaaataaatctagcgaaattcga 714  Q
    ||||||||||||||||||| |||||| |  ||||||| |||||||||||||| |||| ||||    
T  69713 cacacacaagcacatataaccacataat-aaaacaatgaaaaataaatctagagaaaatcga 69653  T

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