View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4846-Insertion-13 (Length: 428)
Name: NF4846-Insertion-13
Description: NF4846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4846-Insertion-13 |
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Alignment Details
Target: chr8 (Bit Score: 348; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 348; E-Value: 0
Query Start/End: Original strand, 8 - 415
Target Start/End: Complemental strand, 39304463 - 39304060
Alignment:
| Q |
8 |
tgatgatgattatgattattgttgttgattgtttttaaacaatgagtttcagggttttctgtgttgaatccatttggcaaattactatgactctcatcat |
107 |
Q |
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| T |
39304463 |
tgatgatgattatgattattgttgttgattgtttttaaacaatgagtttcagggttttctgtgttgaatccatttggcaaattactatgactctcatcat |
39304364 |
T |
|
| Q |
108 |
ccattggaactaaattaatgagcttataggaaggatgttacgtgaccttacaatattacatttaaaatttacattattgtatagatatataaactgaaag |
207 |
Q |
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| T |
39304363 |
ccattggaactaaattaatgagcttat----aggatgttacgtgaccttacaatattacatttaaaatttacattattgtatagatagataaactgaaag |
39304268 |
T |
|
| Q |
208 |
tgaggcataaaaataggcaagtaagaagggttagttaggagaagtaaaagttnnnnnnnnnnnnntaggcaagtcccccggactcgttctagatgttgag |
307 |
Q |
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| T |
39304267 |
tgaggcataaaaataggcaagtaagaagggttagttaggagaagtaaaagttaaaaaaagaaaaataggcaagtcccccggactcgttctagatgttgag |
39304168 |
T |
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| Q |
308 |
tacttcatgtaactgccacgacccgatccaattccaacttagataacactattattgtcaatacaaatagaaataccctttgatgacaaattaccaaact |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39304167 |
tacttcatgtaactgccacgacccgatccaattccaacttagataacactattattgtcaatacaaatagaaataccctttgatgacaaattaccaaact |
39304068 |
T |
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| Q |
408 |
taattaac |
415 |
Q |
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| T |
39304067 |
taattaac |
39304060 |
T |
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