View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4846-Insertion-3 (Length: 815)

Name: NF4846-Insertion-3
Description: NF4846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4846-Insertion-3
NF4846-Insertion-3
[»] chr3 (61 HSPs)
chr3 (302-815)||(30727364-30727880)
chr3 (7-213)||(30727964-30728175)
chr3 (362-491)||(29067284-29067413)
chr3 (362-491)||(28745770-28745899)
chr3 (365-491)||(39427905-39428031)
chr3 (362-491)||(8156130-8156260)
chr3 (363-491)||(3449292-3449419)
chr3 (361-491)||(20756038-20756168)
chr3 (380-491)||(22494781-22494892)
chr3 (361-487)||(22137277-22137403)
chr3 (362-466)||(15806531-15806634)
chr3 (367-491)||(17064326-17064450)
chr3 (371-487)||(21963438-21963554)
chr3 (371-487)||(21985874-21985990)
chr3 (360-491)||(24649688-24649820)
chr3 (362-466)||(27676356-27676460)
chr3 (362-491)||(24620200-24620332)
chr3 (460-528)||(8592194-8592262)
chr3 (468-543)||(28746050-28746124)
chr3 (362-491)||(25870367-25870505)
chr3 (460-542)||(3041489-3041570)
chr3 (460-542)||(8560239-8560320)
chr3 (460-542)||(19348819-19348900)
chr3 (460-542)||(22971075-22971155)
chr3 (362-462)||(17796377-17796477)
chr3 (362-462)||(17796486-17796586)
chr3 (362-462)||(19104817-19104917)
chr3 (362-462)||(19104926-19105026)
chr3 (471-543)||(39428184-39428255)
chr3 (435-491)||(42696920-42696976)
chr3 (468-543)||(20766682-20766756)
chr3 (384-466)||(10872971-10873053)
chr3 (460-542)||(18014257-18014338)
chr3 (470-528)||(22355861-22355919)
chr3 (362-491)||(22356052-22356182)
chr3 (366-462)||(17796272-17796368)
chr3 (366-462)||(19104712-19104808)
chr3 (460-528)||(24619992-24620060)
chr3 (468-543)||(3449091-3449165)
chr3 (460-543)||(17064573-17064655)
chr3 (484-543)||(24649530-24649588)
chr3 (460-543)||(28136028-28136110)
chr3 (460-543)||(41671445-41671527)
chr3 (466-507)||(8560351-8560392)
chr3 (471-520)||(13006102-13006151)
chr3 (468-529)||(27676710-27676771)
chr3 (460-528)||(29067543-29067610)
chr3 (470-529)||(13286220-13286279)
chr3 (468-507)||(18014187-18014226)
chr3 (468-507)||(19348749-19348788)
chr3 (468-507)||(21553786-21553825)
chr3 (363-441)||(28135723-28135801)
chr3 (470-507)||(8592293-8592330)
chr3 (460-529)||(10872509-10872578)
chr3 (361-454)||(13005926-13006019)
chr3 (460-489)||(20756223-20756252)
chr3 (460-489)||(25870221-25870250)
chr3 (460-529)||(27090708-27090777)
chr3 (460-489)||(28745977-28746006)
chr3 (460-489)||(29067478-29067507)
chr3 (460-489)||(39428104-39428133)
[»] chr8 (46 HSPs)
chr8 (362-487)||(5922049-5922174)
chr8 (364-489)||(15294672-15294797)
chr8 (364-489)||(15475041-15475166)
chr8 (362-491)||(45403029-45403158)
chr8 (366-491)||(3094253-3094378)
chr8 (362-491)||(11879600-11879729)
chr8 (362-491)||(11897016-11897145)
chr8 (366-491)||(31424167-31424292)
chr8 (360-480)||(17646991-17647111)
chr8 (363-491)||(29384317-29384444)
chr8 (364-491)||(19704455-19704583)
chr8 (374-488)||(22910205-22910319)
chr8 (411-491)||(23142224-23142304)
chr8 (362-437)||(477101-477176)
chr8 (362-465)||(24056594-24056697)
chr8 (401-491)||(6810861-6810950)
chr8 (460-543)||(45403295-45403377)
chr8 (460-543)||(24414068-24414150)
chr8 (460-543)||(11879866-11879948)
chr8 (460-543)||(11897282-11897364)
chr8 (362-489)||(27836466-27836593)
chr8 (362-464)||(15761466-15761568)
chr8 (470-538)||(19704243-19704310)
chr8 (366-488)||(7489286-7489409)
chr8 (460-542)||(16752289-16752370)
chr8 (460-528)||(2040385-2040453)
chr8 (460-543)||(5922314-5922396)
chr8 (462-529)||(26879778-26879845)
chr8 (432-491)||(32424402-32424461)
chr8 (471-542)||(40541602-40541672)
chr8 (460-528)||(7489078-7489146)
chr8 (401-489)||(15231763-15231851)
chr8 (460-529)||(17647263-17647332)
chr8 (472-529)||(31424442-31424499)
chr8 (471-515)||(7262039-7262083)
chr8 (468-507)||(2040315-2040354)
chr8 (460-543)||(29384093-29384175)
chr8 (460-491)||(29384209-29384240)
chr8 (460-502)||(15294935-15294977)
chr8 (460-502)||(15475304-15475346)
chr8 (451-488)||(9212258-9212295)
chr8 (460-489)||(15761257-15761286)
chr8 (468-529)||(17566372-17566433)
chr8 (460-489)||(17647198-17647227)
chr8 (460-529)||(26574911-26574980)
chr8 (470-507)||(40541714-40541751)
[»] chr6 (56 HSPs)
chr6 (362-488)||(27233280-27233406)
chr6 (361-491)||(17250056-17250186)
chr6 (362-487)||(6943464-6943589)
chr6 (362-491)||(15528110-15528239)
chr6 (362-491)||(30912412-30912541)
chr6 (362-490)||(11327572-11327700)
chr6 (362-491)||(21354748-21354869)
chr6 (360-491)||(26053296-26053427)
chr6 (360-491)||(26073349-26073480)
chr6 (361-487)||(7918385-7918511)
chr6 (366-491)||(10509023-10509148)
chr6 (370-491)||(22498885-22499006)
chr6 (374-491)||(23897823-23897940)
chr6 (362-491)||(7223519-7223641)
chr6 (362-489)||(17543742-17543869)
chr6 (362-491)||(17103202-17103324)
chr6 (362-465)||(18491063-18491166)
chr6 (362-491)||(19748333-19748462)
chr6 (468-528)||(11327357-11327417)
chr6 (461-543)||(21354942-21355023)
chr6 (460-543)||(7223781-7223863)
chr6 (460-543)||(19748599-19748681)
chr6 (471-543)||(22498221-22498292)
chr6 (365-491)||(2912248-2912373)
chr6 (460-540)||(17543514-17543593)
chr6 (460-528)||(27614451-27614519)
chr6 (364-439)||(3573984-3574059)
chr6 (470-528)||(31108431-31108489)
chr6 (460-528)||(15527905-15527973)
chr6 (469-543)||(3573680-3573754)
chr6 (382-464)||(4841946-4842026)
chr6 (468-528)||(7918145-7918205)
chr6 (468-528)||(26053091-26053151)
chr6 (468-528)||(26073144-26073204)
chr6 (362-441)||(5422798-5422877)
chr6 (460-543)||(17103461-17103543)
chr6 (389-466)||(18490910-18490987)
chr6 (460-529)||(30912200-30912269)
chr6 (362-466)||(12245109-12245213)
chr6 (460-528)||(27233094-27233162)
chr6 (389-454)||(18490998-18491063)
chr6 (471-520)||(20432397-20432445)
chr6 (460-528)||(27890652-27890720)
chr6 (462-505)||(18490522-18490565)
chr6 (460-543)||(23898076-23898158)
chr6 (468-507)||(27890582-27890621)
chr6 (460-489)||(7918249-7918278)
chr6 (460-489)||(17103396-17103425)
chr6 (460-489)||(17543629-17543658)
chr6 (460-489)||(19748534-19748563)
chr6 (460-489)||(22498339-22498368)
chr6 (460-529)||(23506108-23506177)
chr6 (460-489)||(26053195-26053224)
chr6 (460-489)||(26073248-26073277)
chr6 (365-454)||(33583766-33583855)
chr6 (462-507)||(33593044-33593089)
[»] chr5 (32 HSPs)
chr5 (362-487)||(20923718-20923843)
chr5 (361-491)||(43234867-43234997)
chr5 (362-491)||(19578942-19579071)
chr5 (362-489)||(22645721-22645848)
chr5 (363-491)||(23172428-23172560)
chr5 (362-491)||(18051530-18051659)
chr5 (362-491)||(21059156-21059284)
chr5 (363-491)||(18843716-18843844)
chr5 (362-491)||(38158254-38158383)
chr5 (370-488)||(27340189-27340307)
chr5 (380-491)||(41688665-41688775)
chr5 (469-528)||(18843990-18844049)
chr5 (411-491)||(19979648-19979728)
chr5 (411-491)||(20320992-20321072)
chr5 (460-528)||(27339982-27340050)
chr5 (460-542)||(15051879-15051960)
chr5 (460-528)||(22645522-22645590)
chr5 (460-528)||(41427685-41427753)
chr5 (460-543)||(20321209-20321291)
chr5 (460-543)||(41688447-41688529)
chr5 (462-507)||(15446402-15446447)
chr5 (472-543)||(6852347-6852417)
chr5 (461-543)||(19579210-19579292)
chr5 (460-543)||(43235134-43235216)
chr5 (470-543)||(18051314-18051386)
chr5 (460-528)||(19377869-19377937)
chr5 (361-435)||(24106640-24106714)
chr5 (364-436)||(19042444-19042516)
chr5 (460-489)||(18843916-18843945)
chr5 (460-489)||(19579144-19579173)
chr5 (460-489)||(20321144-20321173)
chr5 (460-526)||(22984594-22984664)
[»] chr2 (40 HSPs)
chr2 (362-529)||(23863283-23863450)
chr2 (362-491)||(30432419-30432548)
chr2 (362-491)||(31237977-31238106)
chr2 (362-491)||(1404783-1404912)
chr2 (362-491)||(36429848-36429977)
chr2 (362-490)||(20063714-20063842)
chr2 (363-491)||(35565954-35566082)
chr2 (362-491)||(15588850-15588978)
chr2 (364-491)||(25539226-25539353)
chr2 (362-488)||(19491855-19491982)
chr2 (468-528)||(20063997-20064057)
chr2 (364-491)||(31578007-31578133)
chr2 (460-542)||(20034004-20034085)
chr2 (460-528)||(27523891-27523959)
chr2 (362-468)||(1690785-1690891)
chr2 (460-546)||(21869099-21869184)
chr2 (468-528)||(19262111-19262171)
chr2 (460-543)||(19245855-19245937)
chr2 (460-542)||(7302048-7302129)
chr2 (362-464)||(17995055-17995157)
chr2 (460-528)||(974604-974673)
chr2 (460-528)||(31237771-31237839)
chr2 (362-465)||(5395674-5395777)
chr2 (361-456)||(16766709-16766804)
chr2 (401-464)||(31023262-31023325)
chr2 (460-514)||(1405049-1405103)
chr2 (466-507)||(21869215-21869256)
chr2 (471-528)||(25538940-25538997)
chr2 (468-527)||(30433089-30433148)
chr2 (468-507)||(34578085-34578124)
chr2 (460-515)||(34578155-34578210)
chr2 (362-467)||(15266082-15266187)
chr2 (468-509)||(20034114-20034155)
chr2 (405-454)||(34841599-34841648)
chr2 (459-543)||(8428487-8428570)
chr2 (476-516)||(34167571-34167611)
chr2 (460-491)||(13502570-13502601)
chr2 (445-491)||(1690728-1690774)
chr2 (460-529)||(15588649-15588718)
chr2 (462-491)||(34841784-34841813)
[»] chr1 (51 HSPs)
chr1 (362-488)||(21846271-21846397)
chr1 (362-486)||(25146773-25146897)
chr1 (361-491)||(13276266-13276396)
chr1 (362-491)||(9327215-9327344)
chr1 (362-491)||(9955035-9955164)
chr1 (362-488)||(9352066-9352192)
chr1 (362-486)||(18304815-18304940)
chr1 (364-491)||(19009946-19010073)
chr1 (362-491)||(23528656-23528785)
chr1 (364-491)||(12513283-12513410)
chr1 (366-489)||(13100195-13100318)
chr1 (369-491)||(16125455-16125580)
chr1 (362-489)||(41032672-41032799)
chr1 (362-491)||(17055999-17056128)
chr1 (363-491)||(17869750-17869873)
chr1 (363-491)||(42180065-42180193)
chr1 (361-491)||(9128840-9128970)
chr1 (362-466)||(18337547-18337650)
chr1 (361-437)||(30619074-30619150)
chr1 (460-528)||(9954828-9954896)
chr1 (460-528)||(25146563-25146631)
chr1 (460-528)||(9351858-9351926)
chr1 (460-528)||(16125250-16125318)
chr1 (460-528)||(19009743-19009811)
chr1 (460-528)||(21846069-21846137)
chr1 (460-528)||(42179866-42179934)
chr1 (362-457)||(14074404-14074499)
chr1 (460-543)||(13100456-13100538)
chr1 (460-529)||(9321529-9321598)
chr1 (361-449)||(12800623-12800711)
chr1 (460-528)||(14074278-14074346)
chr1 (373-466)||(8772715-8772809)
chr1 (460-514)||(9128647-9128701)
chr1 (460-514)||(16434775-16434829)
chr1 (460-542)||(17197311-17197392)
chr1 (460-520)||(17055722-17055782)
chr1 (460-528)||(23528922-23528990)
chr1 (470-509)||(12002751-12002790)
chr1 (460-523)||(17869550-17869613)
chr1 (468-543)||(41032554-41032628)
chr1 (362-428)||(34478833-34478899)
chr1 (439-480)||(18228278-18228319)
chr1 (460-509)||(27502169-27502218)
chr1 (451-491)||(32881416-32881456)
chr1 (460-520)||(47786124-47786184)
chr1 (460-543)||(12513537-12513619)
chr1 (460-542)||(32881586-32881667)
chr1 (470-515)||(13276064-13276109)
chr1 (460-489)||(18304710-18304739)
chr1 (460-489)||(23528857-23528886)
chr1 (365-466)||(27917477-27917578)
[»] chr7 (57 HSPs)
chr7 (362-489)||(39182260-39182386)
chr7 (362-491)||(8343800-8343929)
chr7 (363-491)||(5058530-5058658)
chr7 (362-491)||(22687664-22687793)
chr7 (364-491)||(8346533-8346660)
chr7 (362-491)||(7730343-7730471)
chr7 (369-486)||(8571250-8571367)
chr7 (360-489)||(11326384-11326513)
chr7 (362-491)||(24725477-24725606)
chr7 (356-491)||(14055245-14055380)
chr7 (356-491)||(14365273-14365408)
chr7 (361-489)||(44944847-44944979)
chr7 (362-488)||(4247356-4247482)
chr7 (362-491)||(8330045-8330174)
chr7 (362-488)||(9685247-9685373)
chr7 (362-491)||(5715290-5715418)
chr7 (362-491)||(24990071-24990200)
chr7 (362-491)||(26281310-26281438)
chr7 (362-491)||(27221418-27221547)
chr7 (401-491)||(17811386-17811476)
chr7 (361-484)||(21846433-21846555)
chr7 (362-492)||(26617471-26617605)
chr7 (371-491)||(11324988-11325107)
chr7 (402-488)||(1977692-1977778)
chr7 (468-543)||(17811622-17811696)
chr7 (460-543)||(24989555-24989637)
chr7 (471-542)||(25842513-25842583)
chr7 (460-528)||(9685089-9685157)
chr7 (471-543)||(20570666-20570737)
chr7 (431-491)||(20570885-20570945)
chr7 (468-515)||(8253992-8254039)
chr7 (366-428)||(4574475-4574537)
chr7 (401-491)||(27509943-27510033)
chr7 (470-543)||(4575006-4575078)
chr7 (362-465)||(30294175-30294275)
chr7 (460-528)||(8304352-8304420)
chr7 (460-543)||(5058794-5058876)
chr7 (460-515)||(5715551-5715606)
chr7 (460-542)||(27221680-27221762)
chr7 (460-529)||(1977814-1977883)
chr7 (468-528)||(23618224-23618284)
chr7 (460-543)||(4247622-4247704)
chr7 (468-543)||(10285684-10285758)
chr7 (460-543)||(26565329-26565411)
chr7 (468-543)||(44944626-44944700)
chr7 (362-448)||(8630001-8630087)
chr7 (471-517)||(17808998-17809044)
chr7 (362-456)||(26565663-26565757)
chr7 (462-542)||(1981107-1981186)
chr7 (460-529)||(17741910-17741981)
chr7 (362-454)||(21157811-21157903)
chr7 (468-507)||(25842625-25842664)
chr7 (471-528)||(11326560-11326617)
chr7 (460-529)||(14055523-14055592)
chr7 (460-529)||(14365551-14365620)
chr7 (460-489)||(17811549-17811578)
chr7 (460-489)||(24725371-24725400)
[»] scaffold0186 (3 HSPs)
scaffold0186 (362-491)||(8443-8572)
scaffold0186 (460-542)||(8707-8788)
scaffold0186 (460-489)||(8642-8671)
[»] chr4 (40 HSPs)
chr4 (362-491)||(5361963-5362092)
chr4 (362-487)||(8011220-8011345)
chr4 (362-491)||(8889228-8889357)
chr4 (360-491)||(9770110-9770241)
chr4 (362-488)||(13551625-13551751)
chr4 (362-491)||(13023567-13023699)
chr4 (361-491)||(9911411-9911542)
chr4 (362-491)||(10142899-10143028)
chr4 (363-466)||(7044728-7044831)
chr4 (362-491)||(36120824-36120953)
chr4 (364-491)||(5375666-5375793)
chr4 (362-491)||(23064963-23065092)
chr4 (363-491)||(17466080-17466208)
chr4 (407-491)||(37240303-37240386)
chr4 (460-543)||(9770378-9770460)
chr4 (362-466)||(18459733-18459837)
chr4 (362-466)||(7452420-7452523)
chr4 (366-466)||(7815561-7815661)
chr4 (460-513)||(8010946-8010999)
chr4 (362-455)||(24719517-24719610)
chr4 (460-528)||(13551467-13551535)
chr4 (460-543)||(5375931-5376013)
chr4 (460-543)||(23064742-23064824)
chr4 (366-467)||(6347088-6347189)
chr4 (460-529)||(7045210-7045279)
chr4 (460-524)||(6346754-6346818)
chr4 (461-529)||(18459425-18459493)
chr4 (468-528)||(36121097-36121157)
chr4 (362-465)||(4156763-4156866)
chr4 (460-543)||(9911192-9911274)
chr4 (470-549)||(46664149-46664227)
chr4 (460-542)||(55476254-55476335)
chr4 (474-545)||(13023838-13023908)
chr4 (461-543)||(7452772-7452853)
chr4 (468-542)||(8409790-8409863)
chr4 (460-529)||(37240505-37240574)
chr4 (460-491)||(4157053-4157084)
chr4 (460-503)||(8367468-8367511)
chr4 (468-543)||(10394884-10394958)
chr4 (460-489)||(36121024-36121053)
[»] scaffold0042 (2 HSPs)
scaffold0042 (362-491)||(93706-93833)
scaffold0042 (460-491)||(93602-93633)
[»] scaffold0417 (2 HSPs)
scaffold0417 (362-491)||(7455-7584)
scaffold0417 (460-510)||(7268-7318)
[»] scaffold0510 (1 HSPs)
scaffold0510 (374-489)||(102-218)
[»] scaffold0048 (1 HSPs)
scaffold0048 (362-454)||(48825-48917)
[»] scaffold0016 (2 HSPs)
scaffold0016 (460-528)||(56220-56288)
scaffold0016 (460-489)||(56324-56353)
[»] scaffold0079 (2 HSPs)
scaffold0079 (460-528)||(14721-14789)
scaffold0079 (468-507)||(14820-14859)
[»] scaffold0036 (1 HSPs)
scaffold0036 (362-466)||(37191-37295)
[»] scaffold0603 (3 HSPs)
scaffold0603 (362-462)||(9049-9149)
scaffold0603 (460-542)||(8741-8822)
scaffold0603 (460-489)||(8858-8887)
[»] scaffold0017 (1 HSPs)
scaffold0017 (475-543)||(38308-38375)
[»] scaffold2084 (1 HSPs)
scaffold2084 (460-542)||(94-175)
[»] scaffold0182 (2 HSPs)
scaffold0182 (470-528)||(24662-24720)
scaffold0182 (468-507)||(24582-24621)
[»] scaffold0115 (1 HSPs)
scaffold0115 (361-447)||(35103-35189)
[»] scaffold0526 (1 HSPs)
scaffold0526 (468-507)||(8352-8391)
[»] scaffold0028 (1 HSPs)
scaffold0028 (460-543)||(145854-145936)
[»] scaffold0027 (2 HSPs)
scaffold0027 (460-494)||(132944-132978)
scaffold0027 (470-507)||(133009-133046)
[»] scaffold0534 (1 HSPs)
scaffold0534 (468-529)||(944-1005)


Alignment Details
Target: chr3 (Bit Score: 418; Significance: 0; HSPs: 61)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 418; E-Value: 0
Query Start/End: Original strand, 302 - 815
Target Start/End: Complemental strand, 30727880 - 30727364
Alignment:
Q  302 cacaatgatcgaatgagagaaagagttgttcaaacgttgttcaaaaatggttgtacatgtattgttgtcaaaatcctgacttaaatcctaaaatcctgaa 401  Q
    ||||||||||| |||||||||| |||| | ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  30727880 cacaatgatcgtatgagagaaaaagttatccaaacgttgttcaaaaatggttgtacacgtattgttatcaaaatcctgacttaaatcttaaaatcctgaa 30727781  T
Q  402 ttttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacgagtctcgattt 501  Q
    |||| |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  30727780 ttttacgactttcttcaccttcaacgactcaaatctatagtagaatcccaaaatagacaaaattcatcgattttgattgcgattttaggagtctcgattt 30727681  T
Q  502 tgctattccctttcaacctgaagtaaaagtcccaattttgacgacatttctctatatcaaatttagtacattcattttgagtttttgcattgttatttat 601  Q
    ||||||||||||||||||||||||||||||||  ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30727680 tgctattccctttcaacctgaagtaaaagtccagattttaacaacatttctctatatcaaatttagtacattcattttgagtttttgcattgttatttat 30727581  T
Q  602 taggtttaaaattggcaagcaagcat-atgagaggaaagaagagtaaatacgttttctacgtactataattttaaaatagttactgtggtggaacagaaa 700  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  30727580 taggtttaaaattggcaagcaagcatgatgagaggaaagaagagtaaatacgttttctacatactataattataaaatagttactgtggtggaacagaaa 30727481  T
Q  701 tgctatacacttgtttttggtacaatagaaatgagttaaattatggcacacactttaggtacatactaaatagttgaagttaagttacactacc--acag 798  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  30727480 tgctatacacttgtttttggtacaatggaaatgtgttaaattatggcacacactttaggtacatactaaatagttgaagttaagttacactaccagacag 30727381  T
Q  799 tagtaacagactaacag 815  Q
    |||||||||||||||||    
T  30727380 tagtaacagactaacag 30727364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 127; E-Value: 4e-65
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 30728175 - 30727964
Alignment:
Q  7 atcaacaactgtaagtaacttgatactttcnnnnnnnnnnngccaatccatttattaagtaacctgcatgctgtttttggggtggaaaccgaaaatgcag 106  Q
    ||||||||||||||||||||||||||||||           | |||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  30728175 atcaacaactgtaagtaacttgatactttctttttttt---ggcaatccgtttattaagtaacctgcatgctgtttttggtgtggaaaccgaaaatgcag 30728079  T
Q  107 tttgttaacagaatagcaggatgtgca-------tgcttctagtagttcttttccttttttaaatatgttttaactt-acctaatatatcaaaaacatta 198  Q
    |||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  30728078 tttgttaacagaatagcaggatgtgcaatgtgcatgcttctagtagttcttttccttttttaaatattttttaacttgacctaatatatcaaaaacatta 30727979  T
Q  199 ataatatttgtacaa 213  Q
    |||||||||||||||    
T  30727978 ataatatttgtacaa 30727964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 29067284 - 29067413
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||| ||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  29067284 attgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatagacaa 29067383  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||| ||||||||||    
T  29067384 aatccatcgattttgattgtgattttacga 29067413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 28745770 - 28745899
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| || ||||||||||||||   | |||||||||||||||||||||||||||||| |||| |||||||||||| ||||||||||||    
T  28745770 attgttgtcaaaatcccgatttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatctcaaaatagacaa 28745869  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  28745870 aattcatcgattttgattgcgattttacga 28745899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 365 - 491
Target Start/End: Original strand, 39427905 - 39428031
Alignment:
Q  365 gttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 464  Q
    ||||||||||||| || ||||||  |||||||||| ||||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||||||||| |    
T  39427905 gttgtcaaaatcccgatttaaattttaaaatcctggattttgcaactttcttcacgttcaacgactcaaatcgatagtagaatcccaaaatagacaaagt 39428004  T
Q  465 ccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||||||||    
T  39428005 ccatcgattttgattgcgattttacga 39428031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 8156260 - 8156130
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa-tagaca 460  Q
    ||||||||||||||||  |||||||| ||||||| | ||||||| ||| ||| ||||||||||| |||| |||||||||||| |||||||||| ||||||    
T  8156260 attgttgtcaaaatcccaacttaaattctaaaattcagaattttacgatttttttcaccttcaatgactcaaatccatagtataatcccaaaattagaca 8156161  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||||||||||||    
T  8156160 aaatccatcgattttgattgcgattttacga 8156130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 3449419 - 3449292
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||| ||||||||||||||||| | | |||||||||||||||| |||||||||| || ||||| |||||||||||| ||||||| ||||    
T  3449419 ttgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttctttaccttcaacg-ctaaaatctatagtagaatcctaaaataggcaaa 3449321  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    |||||| |||||| |||||||||||||||    
T  3449320 atccatagatttttattgcgattttacga 3449292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 491
Target Start/End: Original strand, 20756038 - 20756168
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||||||||||| |||||||||  |||||| | | ||||||||| ||||||||||||||| |||| |||||||||||||||||  ||||||| ||    
T  20756038 tattgttgtcaaaatcccgacttaaattataaaattcaggattttgcgattttcttcaccttcaatgactcaaatccatagtagaatcttaaaataggca 20756137  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    ||||| ||||||||||||||| |||||||||    
T  20756138 aaatcaatcgattttgattgcaattttacga 20756168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 380 - 491
Target Start/End: Complemental strand, 22494892 - 22494781
Alignment:
Q  380 acttaaatcctaaaatcctga-attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgat 478  Q
    ||||||||||||||||| ||| ||||||||||||| |||||||||||||||| |||| ||||||||||||| |||||| ||||||| |||||||||||||    
T  22494892 acttaaatcctaaaatc-tgagattttgcgacttttttcaccttcaacgactaaaattcatagtagaatcctaaaataaacaaaattcatcgattttgat 22494794  T
Q  479 tgcgattttacga 491  Q
    |||||||||||||    
T  22494793 tgcgattttacga 22494781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 361 - 487
Target Start/End: Original strand, 22137277 - 22137403
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||| | ||||||||||||||||||||||||| |   || || |||||||||||||||| |||| || |||||||||||| ||||||||||||  ||    
T  22137277 tattgtttttaaaatcctgacttaaatcctaaaattcaagatgttacgactttcttcaccttgaacgcctcaaatccatagtaaaatcccaaaatatgca 22137376  T
Q  461 aaatccatcgattttgattgcgatttt 487  Q
    ||||||||||||||| |||||||||||    
T  22137377 aaatccatcgattttaattgcgatttt 22137403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 15806634 - 15806531
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||| || |||    
T  15806634 attgttgtcaaaatcc-gacttaaatcctacaatccagaattttgcgactttattcaccttcaatgactcaaatccatagcagaatcccaaaacaggcaa 15806536  T
Q  462 aatcc 466  Q
    |||||    
T  15806535 aatcc 15806531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 367 - 491
Target Start/End: Original strand, 17064326 - 17064450
Alignment:
Q  367 tgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 466  Q
    ||||||||||| |||||||||| |||||| | | ||||||||| | | ||||||||||||||||  ||| ||||||||||| | |||||||||||||| |    
T  17064326 tgtcaaaatcccgacttaaatcttaaaattcaggattttgcgattgtgttcaccttcaacgactccaattcatagtagaattctaaaatagacaaaattc 17064425  T
Q  467 atcgattttgattgcgattttacga 491  Q
    ||||||||| |||||||||||||||    
T  17064426 atcgatttttattgcgattttacga 17064450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 371 - 487
Target Start/End: Original strand, 21963438 - 21963554
Alignment:
Q  371 aaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 470  Q
    ||||||| ||||||||||||||||| |   ||||| |||||||||||||||| ||||||| |||||||||||| ||||| ||||||  ||||||||||||    
T  21963438 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21963537  T
Q  471 attttgattgcgatttt 487  Q
    |||||||| ||||||||    
T  21963538 attttgatagcgatttt 21963554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 371 - 487
Target Start/End: Original strand, 21985874 - 21985990
Alignment:
Q  371 aaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 470  Q
    ||||||| ||||||||||||||||| |   ||||| |||||||||||||||| ||||||| |||||||||||| ||||| ||||||  ||||||||||||    
T  21985874 aaaatcccgacttaaatcctaaaattcaagattttacgactttcttcaccttgaacgactcaaatccatagtaaaatcctaaaatatgcaaaatccatcg 21985973  T
Q  471 attttgattgcgatttt 487  Q
    |||||||| ||||||||    
T  21985974 attttgatagcgatttt 21985990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 360 - 491
Target Start/End: Complemental strand, 24649820 - 24649688
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga- 458  Q
    |||||||||||||||||| |||||||||| |||||||  | |||||  ||||| ||||||||||||||||| |||||||||||||||| |||||||| |     
T  24649820 gtattgttgtcaaaatcccgacttaaatcgtaaaatctaggattttttgacttgcttcaccttcaacgactcaaatccatagtagaattccaaaataaag 24649721  T
Q  459 caaaatccatcgattttgattgcgattttacga 491  Q
    |||||| |||| ||||||| || ||||||||||    
T  24649720 caaaattcatcaattttgactgtgattttacga 24649688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 27676356 - 27676460
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||||||||||||| |||||| | | ||||||||||||| ||||||||| | |||| |||||||||| |||||||||||||||  ||    
T  27676356 attgttgtcaaaatcctgacttaaatcgtaaaatgcaggattttgcgactttattcaccttctatgactcaaatccatagcagaatcccaaaataggtaa 27676455  T
Q  462 aatcc 466  Q
    |||||    
T  27676456 aatcc 27676460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 24620332 - 24620200
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgac---tttcttcaccttcaacgacttaaatccatagtagaatcccaaaataga 458  Q
    |||||||||||||| | |||||||||||||||||     ||||||||||   |||||||||||||||||||| |||| || ||||||||| ||||||||     
T  24620332 attgttgtcaaaattccgacttaaatcctaaaatttaagattttgcgacgactttcttcaccttcaacgactcaaattcacagtagaatctcaaaatagg 24620233  T
Q  459 caaaatccatcgattttgattgcgattttacga 491  Q
    |||||| |||||||||| ||||| |||||||||    
T  24620232 caaaattcatcgattttaattgcaattttacga 24620200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 8592262 - 8592194
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||    
T  8592262 aaaatccttcgattttgattgcgattttacgagtctcgattttgctatttcctttcgacttgaagtaaa 8592194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 468 - 543
Target Start/End: Original strand, 28746050 - 28746124
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||| ||||||||| |||||||||||||||||    
T  28746050 tcgattttgattgcgattttacgagtcccgattttgctattttctttcgacctgaagt-aaagtcccaattttgac 28746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 25870505 - 25870367
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttc----aacgacttaaatccatagtagaatcccaaaatag 457  Q
    |||||||||||||||  |||||||||||||||||||   |||||| ||||||||||| ||||    ||||||| |||| | |||||||| | ||||||||    
T  25870505 attgttgtcaaaatctcgacttaaatcctaaaatccaagattttgtgactttcttcatcttcaacgaacgactcaaattcgtagtagaacctcaaaatag 25870406  T
Q  458 acaaaatccatc-----gattttgattgcgattttacga 491  Q
     |||||||||||     ||||||||||||||||||||||    
T  25870405 gcaaaatccatcgatttgattttgattgcgattttacga 25870367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 3041489 - 3041570
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||| || |||||||||| |||| |||||||    
T  3041489 aaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaaa-tcccgattttga 3041570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 8560320 - 8560239
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| |||||||  || |||||| |||||||| |||||||    
T  8560320 aaaatccttcgattttgattgcgatttcacgagtctcgattttgctactcccttttgacttgaagt-aaagtcccgattttga 8560239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 19348819 - 19348900
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||||||  || |||||| |||||| |||||||||    
T  19348819 aaaatccttccattttgattgcgattttacgagtctcgattttgctactcccttttgacttgaagt-aaagtctcaattttga 19348900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 22971075 - 22971155
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| | ||||| ||| |||||| ||||||||||||||||    
T  22971075 aaaatccttcgattttgattgcgattttacgagtcccgattttgctact-ccttttaacttgaagt-aaagtcccaattttga 22971155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 17796377 - 17796477
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | |||||||||| |||||||  | ||||| ||||||| |||| ||||||| ||| |||| ||||| ||||||| |||||||||||    
T  17796377 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagacaa 17796476  T
Q  462 a 462  Q
    |    
T  17796477 a 17796477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 17796486 - 17796586
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||   || ||||||| |||||||  | ||||| ||||||| |||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  17796486 attgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagacaa 17796585  T
Q  462 a 462  Q
    |    
T  17796586 a 17796586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 19104817 - 19104917
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | |||||||||| |||||||  | ||||| ||||||| |||| ||||||| ||| |||| ||||| ||||||| |||||||||||    
T  19104817 attgttgtcaaaattccgacttaaatcataaaatctaggattttacgactttattcatcttcaacaactcaaattcatagcagaatcctaaaatagacaa 19104916  T
Q  462 a 462  Q
    |    
T  19104917 a 19104917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 362 - 462
Target Start/End: Original strand, 19104926 - 19105026
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||   || ||||||| |||||||  | ||||| ||||||| |||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  19104926 attgttgtcaaaatttcgaattaaatcataaaatctaggatttttcgactttattcaccttcaacaacttaaattcatagcagaatcctaaaatagacaa 19105025  T
Q  462 a 462  Q
    |    
T  19105026 a 19105026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 543
Target Start/End: Original strand, 39428184 - 39428255
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||||||  |||| |||||||| ||||||||    
T  39428184 attttgattgcgattttatgagtcccgattttgctattccctttcaaccgcaagt-aaagtcccgattttgac 39428255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 435 - 491
Target Start/End: Original strand, 42696920 - 42696976
Alignment:
Q  435 tccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||    
T  42696920 tccatagtagaatctcaaaataggcaaaattcatcgattttgattgcgattttacga 42696976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 20766756 - 20766682
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||| |  |||||| |||||||| ||||||||    
T  20766756 tcgattttgattgcgattttacgagtctcgattttgctactctctttcgagttgaagt-aaagtcccgattttgac 20766682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 384 - 466
Target Start/End: Complemental strand, 10873053 - 10872971
Alignment:
Q  384 aaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 466  Q
    |||||||||||||| | |||||| ||  || |||||||||||||||| |||||||||| |||||| |||||||| ||||||||    
T  10873053 aaatcctaaaatccaggattttgtgatattattcaccttcaacgactcaaatccatagcagaatctcaaaataggcaaaatcc 10872971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 18014257 - 18014338
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||||| ||| ||| ||| |||||| |||||||| |||||||    
T  18014257 aaaatccttcgattttgattgcgattttacgagtcccaattttgctactccattttaacttgaagt-aaagtcccgattttga 18014338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 470 - 528
Target Start/End: Complemental strand, 22355919 - 22355861
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||| |||||| |||||    
T  22355919 gattttgattgcgattttacgagtcccgattttgctattccatttcgacctgatgtaaa 22355861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 22356182 - 22356052
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcga-ctttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    |||||| ||||||| | ||||||||||||||||| | | |||||  ||  ||| |||| ||||||| | || ||| ||||||||||||| ||||||  ||    
T  22356182 attgttatcaaaattccgacttaaatcctaaaattcaggattttaagattttttttcagcttcaacaatttgaattcatagtagaatcctaaaataagca 22356083  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    ||||||||  |||||||||||||||||||||    
T  22356082 aaatccatgaattttgattgcgattttacga 22356052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 366 - 462
Target Start/End: Original strand, 17796272 - 17796368
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    |||||||||| |  ||||||||| |||||||  | |||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||||||    
T  17796272 ttgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagacaaa 17796368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 366 - 462
Target Start/End: Original strand, 19104712 - 19104808
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    |||||||||| |  ||||||||| |||||||  | |||||| |||||| |||||||||||| ||| |||| ||||| ||||||| ||||||||||||    
T  19104712 ttgtcaaaattccaacttaaatcataaaatctaggattttgtgactttattcaccttcaacaactaaaattcatagcagaatcctaaaatagacaaa 19104808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 24620060 - 24619992
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||||| |||| | |||||||||||||||||  || |||||||||    
T  24620060 aaaatccttcgattttgattgcgattttacaagtcccaattttgctattcccttttgacttgaagtaaa 24619992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 3449165 - 3449091
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||| |||||||||||||| | ||||||||||| ||| |||||||||| ||| |||| |||||||||||||    
T  3449165 tcgattttggttgcgattttacgattgtcgattttgctcttctctttcaacctaaagcaaaa-tcccaattttgac 3449091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 17064573 - 17064655
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||||||||||||| | ||||||||| | ||  ||||| |||||||| |||| |||||||||||||    
T  17064573 aaaatccttcgattttgattgcgattttacgattgtcgattttgatcttttctttcgacctgaagcaaaa-tcccaattttgac 17064655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 543
Target Start/End: Complemental strand, 24649588 - 24649530
Alignment:
Q  484 ttttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||    
T  24649588 ttttacgagtcccaattttgctattccctttcgacctgaagt-aaagtcccaattttgac 24649530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 28136028 - 28136110
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| || | || ||| ||| |||||||||| ||| |||||||||    
T  28136028 aaaatccttcgattttgatagcgattttacgattctcgattttactctaccattttaacttgaagtaaaa-tcctaattttgac 28136110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 41671445 - 41671527
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||| |||||||||||| | | ||||||||||| ||| ||||| |||||||| |||| |||| ||||||||    
T  41671445 aaaatccttcgattttggttgcgattttacaattatcgattttgctcttctctttcgacctgaagcaaaa-tcccgattttgac 41671527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 507
Target Start/End: Complemental strand, 8560392 - 8560351
Alignment:
Q  466 catcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||||| ||| ||||||||    
T  8560392 catcgattttgattgcgattttacgagtcccgactttgctat 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Original strand, 13006102 - 13006151
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacct 520  Q
    ||||||||||||||||||||| | || |||||||||||||||||| ||||    
T  13006102 attttgattgcgattttacgattttcaattttgctattccctttcgacct 13006151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 27676710 - 27676771
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||||||||||||||||| || | ||||||||||| ||||||||| || ||||| ||||    
T  27676710 tcgattttgattgcgattttaagattttcgattttgctcttccctttcgacttgaagcaaaa 27676771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 29067543 - 29067610
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||| ||||| ||||||| ||||  |||||||||||||||| ||| ||||||||||||    
T  29067543 aaaatccttcgattt-gattgagattttatgagttccgattttgctattcccattcgacctgaagtaaa 29067610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 529
Target Start/End: Original strand, 13286220 - 13286279
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||||||||||||||||||||| | |||||| || ||||||| | |||||||| ||||    
T  13286220 gattttgattgcgattttacgagttttgatttttctcttcccttccgacctgaagcaaaa 13286279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 18014187 - 18014226
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  18014187 tcgattttgattgcgattttacgagtcccgactttgctat 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 19348749 - 19348788
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  19348749 tcgattttgattgcgattttacgagtcccgaatttgctat 19348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 21553825 - 21553786
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  21553825 tcgattttgattgcgattttacgagtcccgactttgctat 21553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 363 - 441
Target Start/End: Original strand, 28135723 - 28135801
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatag 441  Q
    ||||||||||||| | || ||||||| |||||| | | ||||||||||||| ||||| ||||  |||| ||||||||||    
T  28135723 ttgttgtcaaaattccgatttaaatcgtaaaattcaggattttgcgactttattcactttcagtgactcaaatccatag 28135801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 507
Target Start/End: Complemental strand, 8592330 - 8592293
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||| | ||||||||||||    
T  8592330 gattttgattgcgattttacgagacccgattttgctat 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 10872578 - 10872509
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| || |||||||||||||||||| || | | |||||| || ||||||||  |||||||||||||    
T  10872578 aaaatccttcaattttgattgcgattttatgatttttgatttttctcttcccttttgacctgaagtaaaa 10872509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 361 - 454
Target Start/End: Original strand, 13005926 - 13006019
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    ||||||||||||||||  |||||||||   ||||| |  |||||||||||||| |||||||| |||   | |||||||||| | ||||||||||    
T  13005926 tattgttgtcaaaatctcgacttaaatttcaaaattcataattttgcgactttattcacctttaacatttcaaatccatagcaaaatcccaaaa 13006019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 20756223 - 20756252
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  20756223 aaaatccatcgattttgattgcgattttac 20756252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 25870250 - 25870221
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  25870250 aaaatccatcgattttgattgcgattttac 25870221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 27090708 - 27090777
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| |||||||| |||||||| |||||| |  | ||||| |||||||||||| |||| ||||||||    
T  27090708 aaaatccttcgatttttattgcgatcttacgatttgcaatttttctattccctttcgacctaaagtaaaa 27090777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 28745977 - 28746006
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  28745977 aaaatccatcgattttgattgcgattttac 28746006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 29067478 - 29067507
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  29067478 aaaatccatcgattttgattgcgattttac 29067507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 39428104 - 39428133
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  39428104 aaaatccatcgattttgattgcgattttac 39428133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 106; Significance: 1e-52; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 362 - 487
Target Start/End: Original strand, 5922049 - 5922174
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5922049 attgttgtcaaaatcccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttatatccatagtagaatcccaaaatagacaa 5922148  T
Q  462 aatccatcgattttgattgcgatttt 487  Q
    ||||||||||||||||||||||||||    
T  5922149 aatccatcgattttgattgcgatttt 5922174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 364 - 489
Target Start/End: Original strand, 15294672 - 15294797
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||| ||||||| ||||||||||||||||| | | ||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||| |||||    
T  15294672 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15294771  T
Q  464 tccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||    
T  15294772 tccatcgattttgattgcgattttac 15294797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 364 - 489
Target Start/End: Original strand, 15475041 - 15475166
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||| ||||||| ||||||||||||||||| | | ||||||||||||| |||||||||||||||| ||||| |||||||||| ||||||||| |||||    
T  15475041 tgttgtaaaaatcccgacttaaatcctaaaattcaggattttgcgacttttttcaccttcaacgactcaaatcgatagtagaataccaaaataggcaaaa 15475140  T
Q  464 tccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||    
T  15475141 tccatcgattttgattgcgattttac 15475166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 45403029 - 45403158
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  ||||||||| |||||||||   |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||  |||    
T  45403029 attgttgtcaaaatcgcgacttaaattctaaaatccaagattttgcgactttcttgaccttcaacgacttaaatccatagaagaatctcaaaataagcaa 45403128  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  45403129 aatccatcgattttgattgcgattttacga 45403158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 366 - 491
Target Start/End: Complemental strand, 3094378 - 3094253
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    ||||||||||   |||||||||| |||||| | | ||||||| |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||    
T  3094378 ttgtcaaaatttcgacttaaatcttaaaattcaggattttgctactttcttcaccttcaacgactcaaatccatagtagaatcctaaaataggcaaaatc 3094279  T
Q  466 catcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||    
T  3094278 catcgattttgattgcgattttacga 3094253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 11879600 - 11879729
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| ||||||||||||||||||| | | ||||||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||  ||    
T  11879600 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaaa 11879699  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  11879700 aattcatcgattttgattgcgattttacga 11879729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 11897016 - 11897145
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| ||||||||||||||||||| | | ||||||| ||||||||||| |||||||||| ||||| |||||||||||| |||||||  ||    
T  11897016 attgttgtcaaaattctgacttaaatcctaaaattcaggattttgcaactttcttcactttcaacgactcaaatctatagtagaatcctaaaataggaaa 11897115  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  11897116 aattcatcgattttgattgcgattttacga 11897145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 366 - 491
Target Start/End: Original strand, 31424167 - 31424292
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    |||||||||||||||||||||| ||||||| | | ||||| ||||||||||| | |||||||||| |||||||||| ||||||||||||||| |||||||    
T  31424167 ttgtcaaaatcctgacttaaattctaaaattcaggattttacgactttcttccctttcaacgactcaaatccatagaagaatcccaaaataggcaaaatc 31424266  T
Q  466 catcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||    
T  31424267 cattgattttgattgcgattttacga 31424292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 360 - 480
Target Start/End: Original strand, 17646991 - 17647111
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||||||||| | |||||||||| |||||| | | |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||      
T  17646991 gtattgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagga 17647090  T
Q  460 aaaatccatcgattttgattg 480  Q
    ||||| |||||||||||||||    
T  17647091 aaaattcatcgattttgattg 17647111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 29384444 - 29384317
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||| |  ||||||||||||||| |  |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||| ||||    
T  29384444 ttgttgtcaaaatccaggtttaaatcctaaaatcttagattttgcgactttcttcaccttcaacgactcaaatccatagtataatccaaaaataggcaaa 29384345  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    || |||||| |||||||||||||||||||    
T  29384344 attcatcga-tttgattgcgattttacga 29384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 364 - 491
Target Start/End: Complemental strand, 19704583 - 19704455
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcct-gaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||  ||||||||| |||||| |  |  ||||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| ||||    
T  19704583 tgttgtcaaaatcccaacttaaatcttaaaattcaaggtttttgcgactttcttcaccttcaacgactcaaatccatagtagaattccataataggcaaa 19704484  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||| |||||||||    
T  19704483 atccatcgattttgattgcaattttacga 19704455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 374 - 488
Target Start/End: Complemental strand, 22910319 - 22910205
Alignment:
Q  374 atcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgatt 473  Q
    |||| |||||||||||||||||   | ||||| ||||||||||||| |||||||||| ||||| |||||||||||  ||||||| |||||||||| ||||    
T  22910319 atcccgacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtagaatcttaaaataggcaaaatccattgatt 22910220  T
Q  474 ttgattgcgatttta 488  Q
    |||||||||||||||    
T  22910219 ttgattgcgatttta 22910205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 411 - 491
Target Start/End: Original strand, 23142224 - 23142304
Alignment:
Q  411 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||||| ||||||||||| |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||    
T  23142224 tttcttcaacttcaacgactgaaatccatagtagaatcctaaaataggcaaaattcatcgattttgattgcgattttacga 23142304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 362 - 437
Target Start/End: Complemental strand, 477176 - 477101
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatcc 437  Q
    |||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||| |||||||||||    
T  477176 attgttgtcaaaatcctgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaatgacttaaatcc 477101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 24056697 - 24056594
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||| |||||||| |||||||||||||||||||| | ||||||||||||| ||||| || ||||||| ||||||||||   |||||||||||||||||    
T  24056697 attgttatcaaaatcttgacttaaatcctaaaatccaggattttgcgactttattcacatttaacgactcaaatccatagcgaaatcccaaaatagacaa 24056598  T
Q  462 aatc 465  Q
    ||||    
T  24056597 aatc 24056594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 401 - 491
Target Start/End: Original strand, 6810861 - 6810950
Alignment:
Q  401 attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||   ||||||| |||||| |||||||||||||| |||||||||||    
T  6810861 attttgcgactttcttcaccttcaacgactcaaatccatagtagaattttaaaataggcaaaat-catcgattttgattacgattttacga 6810950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 45403295 - 45403377
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||| | |||||||| ||||||||    
T  45403295 aaaatccttcgattttgattgcgattttacgagtctcgattttgctattccctttcgacgtgaaat-aaagtcccgattttgac 45403377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 24414150 - 24414068
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||||||||||  |||||||||||||||||| || |||||| ||||| |||||||||||    
T  24414150 aaaatccttcgattttgattgcgattttacgagtctaaattttgctattccctttcgacatgaagt-aaagttccaattttgac 24414068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 11879866 - 11879948
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||||||||| |||| ||||||||    
T  11879866 aaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa-tcccgattttgac 11879948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 11897282 - 11897364
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||||||||  ||||||| |||||||||||  ||||||||||||| |||| ||||||||    
T  11897282 aaaatccttcgattttgattgcgattttacgagttccgattttactattcccttttgacctgaagtaaaa-tcccgattttgac 11897364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 27836593 - 27836466
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| |  ||||| |||||||||| | | ||||||||  ||| |||||||||||| ||| |||||||||||||||| | ||||||  |||    
T  27836593 attgttgtcaaaattcaaacttagatcctaaaattcaggattttgcggttttattcaccttcaacaactgaaatccatagtagaattctaaaataagcaa 27836494  T
Q  462 aatccatcgattttgattgcgattttac 489  Q
    ||| |||| ||||||||| | |||||||    
T  27836493 aattcatcaattttgattacaattttac 27836466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 464
Target Start/End: Complemental strand, 15761568 - 15761466
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  ||||||||||||||| ||| | |||||| || ||| || ||||||||||||| |||| ||||| | ||||||||||||| |||    
T  15761568 attgttgtcaaaatctcgacttaaatcctaaactccaggattttgtgagtttatttaccttcaacgactcaaattcatagcaaaatcccaaaataggcaa 15761469  T
Q  462 aat 464  Q
    |||    
T  15761468 aat 15761466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 470 - 538
Target Start/End: Complemental strand, 19704310 - 19704243
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaatt 538  Q
    ||||||||||||||||||||||||| |||||||||||||||||||  || |||||||||| ||||||||    
T  19704310 gattttgattgcgattttacgagtcccgattttgctattccctttggacttgaagtaaaa-tcccaatt 19704243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 366 - 488
Target Start/End: Complemental strand, 7489409 - 7489286
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcc----caaaatagacaa 461  Q
    ||||||||||||  | ||||||| |||||| | |||||||||   |||||||||||||||||||| |||||| ||||||||| |     |||||||||||    
T  7489409 ttgtcaaaatccccaattaaatcgtaaaatacagaattttgc---tttcttcaccttcaacgactaaaatccgtagtagaattctaaataaaatagacaa 7489313  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    |||  ||||||||||||||| ||||||    
T  7489312 aatttatcgattttgattgcaatttta 7489286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 16752289 - 16752370
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||| ||||||||||||||||| | ||||||||| |||||||| || |||||| ||||| ||||||||||    
T  16752289 aaaatccttcgattttgtttgcgattttacgagtcccaattttgctactccctttcgacttgaagt-aaagttccaattttga 16752370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 2040385 - 2040453
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||| || ||||| || |||||||||    
T  2040385 aaaatccttcgattttgattgcgattttacgagttccgattttgctactctctttcgacttgaagtaaa 2040453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 5922314 - 5922396
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||||||| |||  ||   ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  5922314 aaaatccttcgattttgattgcgattgtacatgttctgattttgctattccctttcgacctgaagt-aaagtcccgattttgac 5922396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 462 - 529
Target Start/End: Original strand, 26879778 - 26879845
Alignment:
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||||| ||||||||||||||||||||| | | |||||||||  |||||||||||||||| |||||    
T  26879778 aatccatcaattttgattgcgattttacgatttttgattttgctgatccctttcaacctgaactaaaa 26879845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 432 - 491
Target Start/End: Original strand, 32424402 - 32424461
Alignment:
Q  432 aaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||| ||||||||||||| ||||||||||||||  || ||||||||||||||||||||||    
T  32424402 aaattcatagtagaatcctaaaatagacaaaatttatagattttgattgcgattttacga 32424461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 471 - 542
Target Start/End: Complemental strand, 40541672 - 40541602
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    |||||||||||||||||||||||| ||||||||||| | |||||| || |||||| |||||||| |||||||    
T  40541672 attttgattgcgattttacgagtcccgattttgctacttcctttcgacttgaagt-aaagtcccgattttga 40541602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 7489146 - 7489078
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||  ||||||||||||||||||||||||||   ||||||||||| |||||| || |||||||||    
T  7489146 aaaatcctccgattttgattgcgattttacgagtcctaattttgctatttcctttcgacttgaagtaaa 7489078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 489
Target Start/End: Original strand, 15231763 - 15231851
Alignment:
Q  401 attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttac 489  Q
    |||||||||  ||||||||||||||||||| |||| |||| || ||||  ||||||| ||||||||| |   |||||||||||||||||    
T  15231763 attttgcgatgttcttcaccttcaacgactgaaattcatactaaaatcttaaaataggcaaaatccaacatatttgattgcgattttac 15231851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 17647263 - 17647332
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||||||||||||||| || | |||||||||||  || ||||| |||||||| ||||    
T  17647263 aaaatccttcgattttgattgcgattttatgattgtcgattttgctcatctctttcgacctgaagcaaaa 17647332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 472 - 529
Target Start/End: Original strand, 31424442 - 31424499
Alignment:
Q  472 ttttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||||||||||||||||| | |||||||||||  || ||||| |||||||||||||    
T  31424442 ttttgattgcgattttacgattgtcgattttgctcatctctttcgacctgaagtaaaa 31424499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 471 - 515
Target Start/End: Original strand, 7262039 - 7262083
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttc 515  Q
    |||||||||||||||||||||||| ||||||||||| | ||||||    
T  7262039 attttgattgcgattttacgagtcccgattttgctacttcctttc 7262083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 2040315 - 2040354
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  2040315 tcgattttgattgcgattttacgagtcccgactttgctat 2040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 29384175 - 29384093
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||| |||||||||||||| | |||||||| || ||  ||||| |||||||| |||| |||| ||||||||    
T  29384175 aaaatccttcgattttggttgcgattttacgattgtcgatttttctcttttctttcgacctgaagcaaaa-tcccgattttgac 29384093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 491
Target Start/End: Complemental strand, 29384240 - 29384209
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||||    
T  29384240 aaaatccatcgattttgattgcgattttacga 29384209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 15294935 - 15294977
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgatttt 502  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  15294935 aaaatccttcgattttgattgcgattttaggagtcccgatttt 15294977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 502
Target Start/End: Original strand, 15475304 - 15475346
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgatttt 502  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||    
T  15475304 aaaatccttcgattttgattgcgattttaggagtcccgatttt 15475346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 451 - 488
Target Start/End: Complemental strand, 9212295 - 9212258
Alignment:
Q  451 aaaatagacaaaatccatcgattttgattgcgatttta 488  Q
    |||||||  |||||||||||||||||||||||||||||    
T  9212295 aaaataggaaaaatccatcgattttgattgcgatttta 9212258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 15761286 - 15761257
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  15761286 aaaatccatcgattttgattgcgattttac 15761257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 17566372 - 17566433
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||||||||||| ||||||||| | || |||||||| ||||||||  |||||||| ||||    
T  17566372 tcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaa 17566433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 17647198 - 17647227
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  17647198 aaaatccatcgattttgattgcgattttac 17647227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 26574980 - 26574911
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| || |||||||||||||||||||||   || ||||| |||||  ||||| |||||||||||||    
T  26574980 aaaatccttcaattttgattgcgattttacgatattcaatttttctattgtctttctacctgaagtaaaa 26574911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 507
Target Start/End: Complemental strand, 40541751 - 40541714
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  40541751 gattttgattgcgattttacgagtcccgactttgctat 40541714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 103; Significance: 8e-51; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 362 - 488
Target Start/End: Complemental strand, 27233406 - 27233280
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||| | | ||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27233406 attgttgtcaaactaccgacttaaatcctaaaatccaggattttgtgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 27233307  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    |||||||||||||||||||||||||||    
T  27233306 aatccatcgattttgattgcgatttta 27233280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 361 - 491
Target Start/End: Original strand, 17250056 - 17250186
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||| ||||||| ||||||||||||||||||| | ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  17250056 tattgttgttaaaatcccgacttaaatcctaaaatccaggattttgcaactttcttcaccttcaacgacttaaatccatactagaatcccaaaataggca 17250155  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    |||| ||| ||||||||||||||||||||||    
T  17250156 aaattcattgattttgattgcgattttacga 17250186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 362 - 487
Target Start/End: Complemental strand, 6943589 - 6943464
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||| | | |||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||    
T  6943589 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatcgatagtagaatctcaaaatagacaa 6943490  T
Q  462 aatccatcgattttgattgcgatttt 487  Q
    ||| ||||||||||||||||||||||    
T  6943489 aattcatcgattttgattgcgatttt 6943464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 15528239 - 15528110
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||| | | |||||||||||||||||||||| |||||||||||| ||||||||||||  |||||||||||    
T  15528239 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcacctttaacgacttaaattcatagtagaatcttaaaatagacaa 15528140  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||| ||||||||||||||||    
T  15528139 aatccatcgatttcgattgcgattttacga 15528110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 30912541 - 30912412
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||||||||||||||||   | |||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||    
T  30912541 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccataatagaatcacaaaataggcaa 30912442  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||| ||||||||||||||||||||||    
T  30912441 aatccatagattttgattgcgattttacga 30912412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 362 - 490
Target Start/End: Complemental strand, 11327700 - 11327572
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||| ||||||||||    |||||||  |||||||| |||||| ||||||||||||||||||||||||||||||| |||    
T  11327700 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggcaa 11327601  T
Q  462 aatccatcgattttgattgcgattttacg 490  Q
    ||| |||||||||| ||||||||||||||    
T  11327600 aattcatcgattttaattgcgattttacg 11327572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 21354748 - 21354869
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||||||||||||||||||||        ||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  21354748 attgttgtcaaaatcccaacttaaatcctaaaatcctg--------gactttctttaccttcaacgacttaaatccatggtagaatcccaaaatagacaa 21354839  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||| |||| |||||||||||||||    
T  21354840 aatccatcgttttttattgcgattttacga 21354869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 360 - 491
Target Start/End: Complemental strand, 26053427 - 26053296
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||| |||| |||| |||| |||||||||||||||  |    
T  26053427 gtattgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagc 26053328  T
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    |||||||||| ||||||||||  |||||||||    
T  26053327 aaaatccatcaattttgattgtcattttacga 26053296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 360 - 491
Target Start/End: Complemental strand, 26073480 - 26073349
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||||||||||| |||||||||| |||||||  | ||||||||||||||||||||||||| |||| |||| |||| |||||||||||||||  |    
T  26073480 gtattgttgtcaaaatcccgacttaaatcttaaaatctaggattttgcgactttcttcaccttcaatgactcaaattcataatagaatcccaaaataagc 26073381  T
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    |||||||||| ||||||||||  |||||||||    
T  26073380 aaaatccatcaattttgattgtcattttacga 26073349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 361 - 487
Target Start/End: Complemental strand, 7918511 - 7918385
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||||||||||| ||||||||| ||||||| | | ||||||||||||| ||||||||||||||||||||||||||||| ||||| || |||  ||    
T  7918511 tattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttttttcaccttcaacgacttaaatccatagtaaaatcctaacataagca 7918412  T
Q  461 aaatccatcgattttgattgcgatttt 487  Q
    ||||| |||||||||||||| ||||||    
T  7918411 aaatcaatcgattttgattgggatttt 7918385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 366 - 491
Target Start/End: Complemental strand, 10509148 - 10509023
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    |||||||||||| ||||||||||||||||| | ||| |||| |||||||||||| ||||| |||| ||||  |||||||||||||||||||| ||||||     
T  10509148 ttgtcaaaatccagacttaaatcctaaaattcagaaatttgtgactttcttcacattcaatgactcaaatttatagtagaatcccaaaataggcaaaatt 10509049  T
Q  466 catcgattttgattgcgattttacga 491  Q
    |||||||||||||| |||||||||||    
T  10509048 catcgattttgattacgattttacga 10509023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 370 - 491
Target Start/End: Complemental strand, 22499006 - 22498885
Alignment:
Q  370 caaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatc 469  Q
    ||||||||  ||| |||||||||| |||  ||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||||||||||||    
T  22499006 caaaatcccaactaaaatcctaaattccacaattttgcgactttcttcaccttgaacgactcaaatccatagtacaatctcaaaatagacaaaatccatc 22498907  T
Q  470 gattttgattgcgattttacga 491  Q
    |||||| ||||| |||||||||    
T  22498906 gattttaattgcaattttacga 22498885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 374 - 491
Target Start/End: Original strand, 23897823 - 23897940
Alignment:
Q  374 atcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgatt 473  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||| |||||||||| |||||||||||| ||| | ||||||| | |||||||||||||    
T  23897823 atcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaatccatcgatt 23897922  T
Q  474 ttgattgcgattttacga 491  Q
    ||||||||||||||||||    
T  23897923 ttgattgcgattttacga 23897940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 7223519 - 7223641
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||||||||||||   | |||||||||||||||||||||       ||||||||||||||||||| ||||||||  |||    
T  7223519 attgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcacct-------cttaaatccatagtagaattccaaaataagcaa 7223611  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  7223612 aatccatcgattttgattgcgattttacga 7223641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 17543869 - 17543742
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  ||||||||||||||||| | | ||||||||||||| ||||| |||||||||| |||||||||||||||||  ||||||  |||    
T  17543869 attgttgtcaaaatctcgacttaaatcctaaaattcaggattttgcgacttttttcactttcaacgactcaaatccatagtagaatcttaaaataagcaa 17543770  T
Q  462 aatccatcgattttgattgcgattttac 489  Q
    |||| || ||||||||||||||||||||    
T  17543769 aatctatggattttgattgcgattttac 17543742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 17103202 - 17103324
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||||| |||||| | | ||||||||||       || |||||||||| |||| |||||||||||||||||||||||||    
T  17103202 attgttgtcaaaatcccgacttaaatcttaaaattcaggattttgcgac-------actttcaacgactcaaatgcatagtagaatcccaaaatagacaa 17103294  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||| |||||||||||    
T  17103295 aatccatcgattttgattacgattttacga 17103324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 18491166 - 18491063
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||| ||||||||||| ||||||||||||||||||| |||||||||  |||| |||||||||||||||| |||||||||| ||||||||||||  |||||    
T  18491166 attgctgtcaaaatcccgacttaaatcctaaaatccagaattttgcatctttattcaccttcaacgactcaaatccatagcagaatcccaaaactgacaa 18491067  T
Q  462 aatc 465  Q
    ||||    
T  18491066 aatc 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 19748333 - 19748462
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||| ||||||||| |||||||||| || ||||| | |||||| || |||||||||||| || |||| |||||| ||||||||||  ||||||| |||    
T  19748333 attgttttcaaaatcccgacttaaatcttacaatccaggattttgagattttcttcacctttaatgactcaaatccgtagtagaatcttaaaataggcaa 19748432  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||| ||||||||||    
T  19748433 aattcatcgattttgattgtgattttacga 19748462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 11327417 - 11327357
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11327417 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 11327357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 21354942 - 21355023
Alignment:
Q  461 aaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||| |||||||||||||    
T  21354942 aaatccatcgattttgattgcgattttacgagtcctgatttttctattccctttcaacttgaagtaaaa-tcccaattttgac 21355023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 7223781 - 7223863
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  7223781 aaaatccttcgattttgattgcaattttacgagtcccgattttgctattccctttcgacctgaagt-aaagtcccgattttgac 7223863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 19748599 - 19748681
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| | |||||||| ||||||||    
T  19748599 aaaatccttcgattttgattgcgattttacgaatcccgattttgctattccctttcaacctgaa-ttaaagtcccgattttgac 19748681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 471 - 543
Target Start/End: Complemental strand, 22498292 - 22498221
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||||||||| | |||||||||||||||||| ||||||||| |||||||||||||||||    
T  22498292 attttgattgcgattttacgagtcccaattttgctattccctttcgacctgaagt-aaagtcccaattttgac 22498221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 365 - 491
Target Start/End: Complemental strand, 2912373 - 2912248
Alignment:
Q  365 gttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 464  Q
    ||||||||||||| |||||||||| ||||||   | ||||||| ||||||| || ||||||||| | ||||| |||||||||||  ||||||  ||||||    
T  2912373 gttgtcaaaatcccgacttaaatcttaaaatttaggattttgcaactttctccatcttcaacgattcaaatc-atagtagaatcttaaaataagcaaaat 2912275  T
Q  465 ccatcgattttgattgcgattttacga 491  Q
     |||||||||||||||| |||||||||    
T  2912274 tcatcgattttgattgcaattttacga 2912248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 540
Target Start/End: Complemental strand, 17543593 - 17543514
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaatttt 540  Q
    ||||||| |||||||||||| |||||||| ||||| ||||||||||||||| |||| ||||||||| ||||||||||||||    
T  17543593 aaaatccttcgattttgatttcgattttatgagtcccgattttgctattccttttcgacctgaagt-aaagtcccaatttt 17543514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 27614519 - 27614451
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||| |||||||||||| ||||||||||||    
T  27614519 aaaatccttcgattttgattgtgattttacgagtcccgattttactattccctttcgacctgaagtaaa 27614451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 364 - 439
Target Start/End: Complemental strand, 3574059 - 3573984
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccat 439  Q
    |||| ||||||| | ||||||||| ||||||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  3574059 tgttttcaaaattccgacttaaattctaaaatccagaatttcgcgactttcttcaccttcaacgactcaaatccat 3573984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 31108431 - 31108489
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||    
T  31108431 gattttgattgcggttttacgaatctcgattttgctattccctttcgacctgaagtaaa 31108489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 15527973 - 15527905
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||| |||||  ||||||||||||| |||||| ||||||||||||    
T  15527973 aaaatccttcgattttgattgcgattttccgagttccgattttgctatttcctttcgacctgaagtaaa 15527905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 469 - 543
Target Start/End: Complemental strand, 3573754 - 3573680
Alignment:
Q  469 cgattttgattgcgattttacgagtctcgattttgctattccc-tttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||||||||||||||||||||  ||||||||||||||| |||| ||||||||| |||||||| ||||||||    
T  3573754 cgattttgattgcgattttacgagtcctgattttgctattcccttttcgacctgaagt-aaagtcccgattttgac 3573680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 382 - 464
Target Start/End: Complemental strand, 4842026 - 4841946
Alignment:
Q  382 ttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 464  Q
    ||||||||||||||  || ||||||||||||| |||||||||||||||| |||||| ||| ||||||||| ||||| ||||||    
T  4842026 ttaaatcctaaaat--tggattttgcgactttattcaccttcaacgactcaaatccgtagcagaatcccataataggcaaaat 4841946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 7918205 - 7918145
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||||| ||||||||||||  |||| |||||||||||||| ||||||||||||    
T  7918205 tcgattttgattgcaattttacgagtcctgattctgctattccctttcgacctgaagtaaa 7918145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 26053151 - 26053091
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  26053151 tcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaa 26053091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 26073204 - 26073144
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||| ||||||||||||| | ||||||||||| |||||| ||||||||||||    
T  26073204 tcgattttgattgggattttacgagtcccaattttgctatttcctttcgacctgaagtaaa 26073144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 441
Target Start/End: Complemental strand, 5422877 - 5422798
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatag 441  Q
    |||||||||||||||| ||||||||| ||||||| |   ||||||| ||||| |||||||||||||||| ||||| ||||    
T  5422877 attgttgtcaaaatcccgacttaaatactaaaattcatgattttgcaactttattcaccttcaacgactcaaatctatag 5422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 17103461 - 17103543
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||| | |||||||||||||||||||||  ||||||| ||||||||||| || |||||| |||||||| ||||||||    
T  17103461 aaaatccttcggtattgattgcgattttacgagtcctgattttgttattccctttcgacttgaagt-aaagtcccgattttgac 17103543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 18490987 - 18490910
Alignment:
Q  389 ctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatcc 466  Q
    ||||||||| | ||||||| ||||| |||||||||||||||| ||| |||||| | ||||||||||  ||||||||||    
T  18490987 ctaaaatccagcattttgcaactttattcaccttcaacgactgaaacccatagcataatcccaaaaatgacaaaatcc 18490910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 30912269 - 30912200
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| || |||||| ||| |||||||||| | ||||||||||||||| |||||||||||||| ||||    
T  30912269 aaaatccttcaattttggttgagattttacgattatcgattttgctattctctttcaacctgaagcaaaa 30912200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 12245109 - 12245213
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| |||||| ||| ||||||| |||||| | | ||||||||||||| ||||| ||||  || |||||||||| | | |||||||||| ||| ||    
T  12245109 attgttgttaaaatcatgatttaaatcttaaaattcagtattttgcgactttattcactttcatggatttaaatccattgcaaaatcccaaaacagataa 12245208  T
Q  462 aatcc 466  Q
    |||||    
T  12245209 aatcc 12245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 27233162 - 27233094
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| || |||||||||||||||||| ||||| ||||||||  |||||||||  ||||||||||||    
T  27233162 aaaatccttcaattttgattgcgattttatgagtcccgattttgtcattcccttttgacctgaagtaaa 27233094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 389 - 454
Target Start/End: Complemental strand, 18491063 - 18490998
Alignment:
Q  389 ctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    ||||||||| | ||||||| ||||| ||||||||||| |||| |||||||||| ||||||| ||||    
T  18491063 ctaaaatccagcattttgcaactttattcaccttcaatgactcaaatccatagcagaatcctaaaa 18490998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 471 - 520
Target Start/End: Complemental strand, 20432445 - 20432397
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacct 520  Q
    ||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  20432445 attttgattgcgattttacgattttcgattttgctatt-cctttcaacct 20432397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 27890652 - 27890720
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| || ||||||||| |||||||||||||  | ||||| ||| ||||||||||| |||||||||    
T  27890652 aaaatccttcaattttgattacgattttacgagttccaattttactactccctttcaacttgaagtaaa 27890720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 462 - 505
Target Start/End: Complemental strand, 18490565 - 18490522
Alignment:
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgct 505  Q
    |||||||| ||||||||||||||||||||| | |||||||||||    
T  18490565 aatccatcaattttgattgcgattttacgaatttcgattttgct 18490522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 23898076 - 23898158
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||| || ||||||||||| | ||||||||||| ||| | ||| |||||||| |||| |||| ||||||||    
T  23898076 aaaatccttcgattttggtttcgattttacgattgtcgattttgctcttctcattcgacctgaagcaaaa-tcccgattttgac 23898158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 27890582 - 27890621
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    |||||||||||||||||||||||||||  |||||||||||    
T  27890582 tcgattttgattgcgattttacgagtcctgattttgctat 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 7918278 - 7918249
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  7918278 aaaatccatcgattttgattgcgattttac 7918249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 17103396 - 17103425
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  17103396 aaaatccatcgattttgattgcgattttac 17103425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 17543658 - 17543629
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  17543658 aaaatccatcgattttgattgcgattttac 17543629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 19748534 - 19748563
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  19748534 aaaatccatcgattttgattgcgattttac 19748563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 22498368 - 22498339
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  22498368 aaaatccatcgattttgattgcgattttac 22498339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 23506108 - 23506177
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| |||||||| |||| |||||||| | | ||||||||||||||| ||||| || | ||||||||    
T  23506108 aaaatccttcgattttaattgtgattttacaattttcgattttgctattctctttcgacttaaagtaaaa 23506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 26053224 - 26053195
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  26053224 aaaatccatcgattttgattgcgattttac 26053195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 26073277 - 26073248
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  26073277 aaaatccatcgattttgattgcgattttac 26073248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 365 - 454
Target Start/End: Complemental strand, 33583855 - 33583766
Alignment:
Q  365 gttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    ||||||||||||  ||||||| ||| ||||||| | |||||  ||||||  | | ||||||||||| |||||||||| |||| |||||||    
T  33583855 gttgtcaaaatcgcgacttaagtcccaaaatccaggatttttagactttaattagcttcaacgactcaaatccatagcagaaacccaaaa 33583766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 507
Target Start/End: Complemental strand, 33593089 - 33593044
Alignment:
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| || | | |||||||||||    
T  33593089 aatccatcgattttgattgcgattttatgatttttgattttgctat 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 3e-50; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 362 - 487
Target Start/End: Original strand, 20923718 - 20923843
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| |||    
T  20923718 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttgcgactttcttcaccttcaacgacctaaatccatagtagaatcctaaaataggcaa 20923817  T
Q  462 aatccatcgattttgattgcgatttt 487  Q
    | ||||||||||||||||||||||||    
T  20923818 agtccatcgattttgattgcgatttt 20923843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 361 - 491
Target Start/End: Original strand, 43234867 - 43234997
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    |||||||||||||||||  |||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||  |    
T  43234867 tattgttgtcaaaatcccaacttaaatcctaaaattcaggattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcctaaaataggaa 43234966  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||| ||||||||||    
T  43234967 aaatccatcgattttgattgtgattttacga 43234997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 19578942 - 19579071
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| |  ||||||||| |||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||    
T  19578942 attgttgtcaaaattccaacttaaatcataaaatccaggattttgcgattttcttcaccttcaacgacttaaatccatagtagaatcccaaaataagcaa 19579041  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||| |||||||    
T  19579042 aatccatcgattttgattgcgactttacga 19579071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 22645848 - 22645721
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||   ||    
T  22645848 attgttgtcaaaatcccgacttaaatcctaaaatccagtattttgcgactttcttcaccttcaacgatttaaatccatagtaaaatcccaaaataagtaa 22645749  T
Q  462 aatccatcgattttgattgcgattttac 489  Q
    | |||||| |||||||||||||||||||    
T  22645748 attccatctattttgattgcgattttac 22645721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 23172560 - 23172428
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||| |||||||||||||||||   | |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  23172560 ttgttgtcaaaatcccgacttaaatcctaaaatttaggattttgcgactttcttcatcttcaacgacttaaatccatagtagaatcccaaaatagacaaa 23172461  T
Q  463 ----atccatcgattttgattgcgattttacga 491  Q
        ||| |||||||||||| ||||||||||||    
T  23172460 attcatcgatcgattttgatcgcgattttacga 23172428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 18051659 - 18051530
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||||||||||||   | |||||||||||||||||| ||||||||||| ||||| |||||||||| | ||||||| |||    
T  18051659 attgttgtcaaaatcccgacttaaatcctaaaatataggattttgcgactttcttcaacttcaacgactcaaatctatagtagaattctaaaataggcaa 18051560  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||||| |||||    
T  18051559 aatccatcgattttgattgcgattgtacga 18051530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 21059284 - 21059156
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| || |||||||||||||||  | ||||||||||||||||||| |||||||||| |||||||| |||||||||| |||||| |||    
T  21059284 attgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcactttcaacgactcaaatccat-gtagaatccctaaataggcaa 21059186  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  21059185 aattcatcgattttgattgcgattttacga 21059156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 363 - 491
Target Start/End: Original strand, 18843716 - 18843844
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||| ||||| | ||||||||||||| ||| | | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  18843716 ttgttgttaaaattccgacttaaatcctataattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaatcccaaaatagacaaa 18843815  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    || |||||||||||||||| ||| |||||    
T  18843816 attcatcgattttgattgcaattatacga 18843844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 38158383 - 38158254
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | ||||||||||||||||||  | |||||||||||||||| || |||||| ||| ||||||| ||||||||||||||||||||||    
T  38158383 attgttgtcaaaattccgacttaaatcctaaaatctaggattttgcgactttcttgactttcaacaactcaaatccagagtagaatcccaaaatagacaa 38158284  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||| ||||||| |||  |||||||||    
T  38158283 aatccattgattttggttgttattttacga 38158254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 370 - 488
Target Start/End: Complemental strand, 27340307 - 27340189
Alignment:
Q  370 caaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatc 469  Q
    |||||||| |||||||||| ||||||     |||||||||||||||||| ||||||||||| ||||| |||||||||||  ||||||| |||||| ||||    
T  27340307 caaaatcccgacttaaatcataaaatttatgattttgcgactttcttcatcttcaacgactcaaatctatagtagaatcttaaaataggcaaaattcatc 27340208  T
Q  470 gattttgattgcgatttta 488  Q
    ||||||||||| |||||||    
T  27340207 gattttgattgagatttta 27340189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 380 - 491
Target Start/End: Complemental strand, 41688775 - 41688665
Alignment:
Q  380 acttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgatt 479  Q
    |||||||||||||||| | || |||||| | |||||||||||||||||||||||||  |||||| ||| | ||||||  |||||| ||||||||||||||    
T  41688775 acttaaatcctaaaattcgga-ttttgcaattttcttcaccttcaacgacttaaatttatagtaaaattctaaaataagcaaaattcatcgattttgatt 41688677  T
Q  480 gcgattttacga 491  Q
    ||||||||||||    
T  41688676 gcgattttacga 41688665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 469 - 528
Target Start/End: Original strand, 18843990 - 18844049
Alignment:
Q  469 cgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||    
T  18843990 cgattttgattgcgattttacgagtcccgattttgctattccctttcgacctgaagtaaa 18844049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 491
Target Start/End: Original strand, 19979648 - 19979728
Alignment:
Q  411 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||||| ||||||||||| |||| ||| |||||||||||||| |  |||||||||| ||||||||||||||||||||||    
T  19979648 tttcttcatcttcaacgactcaaattcatggtagaatcccaaaacacgcaaaatccatggattttgattgcgattttacga 19979728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 491
Target Start/End: Original strand, 20320992 - 20321072
Alignment:
Q  411 tttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||| |||| |||||||||||| ||| |||||||||| ||||| |||| | |||||||||||||||||||    
T  20320992 tttcttcaccttcaatgactaaaatccatagtaaaattccaaaatagataaaattcatcaactttgattgcgattttacga 20321072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 27340050 - 27339982
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||| |||| | |||||||||||||||||||||||| |||||||||    
T  27340050 aaaatccttcgattttgattgcgatttcacgattttcgattttgctattccctttcaacttgaagtaaa 27339982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 15051960 - 15051879
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||| || |||||| |||||||| |||||||    
T  15051960 aaaatccttcgattttgattgcgattttacgagtcccgattttgctactccttttcgacttgaagt-aaagtcccgattttga 15051879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 22645590 - 22645522
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||| |||||||||||||| |||||||||||||||||  ||| ||||||||    
T  22645590 aaaatccttcgattttgattgcaattttacgagtctcaattttgctattccctttagaccagaagtaaa 22645522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 41427685 - 41427753
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| ||  ||||||||    
T  41427685 aaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgactcgaagtaaa 41427753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 20321209 - 20321291
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| || |||||||||||||||||| ||||| ||||||| ||||||| |||  ||||||||| |||||||||||||||||    
T  20321209 aaaatccttcaattttgattgcgattttatgagtcccgattttactattcctttttgacctgaagt-aaagtcccaattttgac 20321291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 41688529 - 41688447
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||| ||||||||||| ||||| ||||||||||||||||||||  ||| |||| |||||||| ||||||||    
T  41688529 aaaatccttcgattttggttgcgattttaggagtcccgattttgctattccctttcgtcctaaagt-aaagtcccgattttgac 41688447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 462 - 507
Target Start/End: Original strand, 15446402 - 15446447
Alignment:
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  15446402 aatccatcgattttgattgcgattttacgagtttcgattttgctat 15446447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 472 - 543
Target Start/End: Complemental strand, 6852417 - 6852347
Alignment:
Q  472 ttttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||| |||||| ||||| |||||||||||||||||||| |||||||||  ||||||| ||||||||    
T  6852417 ttttgattgcaattttatgagtcccgattttgctattccctttcgacctgaagt-gaagtcccgattttgac 6852347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 19579210 - 19579292
Alignment:
Q  461 aaatccatcgattttgattgcgattttacgagtctcgattttgc-tattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||| ||||||||||||||||||||| ||||| | ||||||| || |||||||| ||||||||||||| |||| ||||||||    
T  19579210 aaatccttcgattttgattgcgattttatgagtcccaattttgcttactccctttcgacctgaagtaaaa-tcccgattttgac 19579292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 43235134 - 43235216
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||| ||||   |||||||||||||||||||  |  ||||| |||||||||||||||||    
T  43235134 aaaatccttcgattttgattgcgattttatgagtactgattttgctattccctttcgtctcgaagt-aaagtcccaattttgac 43235216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 470 - 543
Target Start/End: Complemental strand, 18051386 - 18051314
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||| ||| |||| ||||||| |||||||||||| |||| |||||||| |||| ||||||||    
T  18051386 gattttgattgcgattctacaagtcccgatttttctattccctttcgacctaaagtaaaa-tcccgattttgac 18051314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 19377869 - 19377937
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||  | ||||||| ||||||||||||||||||||||| || | |||||||    
T  19377869 aaaatccttcgattttgattgtaaatttacgattctcgattttgctattccctttccacttaaagtaaa 19377937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 435
Target Start/End: Original strand, 24106640 - 24106714
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaat 435  Q
    |||| ||||||||||||||| ||||||| |||||| | | ||||||| ||||||||||||  |||||||| ||||    
T  24106640 tattattgtcaaaatcctgatttaaatcataaaattcaggattttgcaactttcttcaccagcaacgactcaaat 24106714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 364 - 436
Target Start/End: Complemental strand, 19042516 - 19042444
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatc 436  Q
    ||||||||||||||  |||||||| |||||||     |||||| ||||||||||||||||||||||| |||||    
T  19042516 tgttgtcaaaatcccaacttaaattctaaaatttaagattttgtgactttcttcaccttcaacgactcaaatc 19042444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 18843916 - 18843945
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  18843916 aaaatccatcgattttgattgcgattttac 18843945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 19579144 - 19579173
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  19579144 aaaatccatcgattttgattgcgattttac 19579173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 20321144 - 20321173
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  20321144 aaaatccatcgattttgattgcgattttac 20321173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 526
Target Start/End: Complemental strand, 22984664 - 22984594
Alignment:
Q  460 aaaatccatcgattttgattgcg----attttacgagtctcgattttgctattccctttcaacctgaagta 526  Q
    ||||||| ||||||||||||||     ||||||||| |  ||||||||||||||| |||||||||||||||    
T  22984664 aaaatccttcgattttgattgcatgcaattttacgatttacgattttgctattccttttcaacctgaagta 22984594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 5e-49; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 362 - 529
Target Start/End: Complemental strand, 23863450 - 23863283
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||| ||||||||  ||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||| |||    
T  23863450 attgttgtcaaaatcccgacttaaattctaaaatcgagaattttgcgactttcttcactttcaacgactgaaatccatagtagaatctcaaaataggcaa 23863351  T
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||||||||||| |||||||||||||| | | ||||||||| ||| ||||| || ||||| ||||    
T  23863350 aatccatcgattttggttgcgattttacgaatgttgattttgcttttctctttcgacttgaagcaaaa 23863283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 30432419 - 30432548
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||||| |||||| ||||||||  | ||||| ||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||    
T  30432419 attgttgtcaaaatcctgatttaaattctaaaatctaggatttttcgactttcttcgccttcaacgactcaaatccatagtagaatctcaaaatagacaa 30432518  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||| |||||||||    
T  30432519 aatccatcgattttgattgcaattttacga 30432548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 31238106 - 31237977
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||  | ||||||| |||||||||||||||||||||| |||| ||||||||||||  |||||||  ||    
T  31238106 attgttgtcaaaatcccgacttaaatcctaaaatctaggattttgccactttcttcaccttcaacgactcaaattcatagtagaatcttaaaataggaaa 31238007  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  31238006 aatccatcgattttgattgcgattttacga 31237977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 1404783 - 1404912
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||| |||||||   | |||||| |||||||||||||||||||||||||||||||| ||||||||| ||| ||  |||    
T  1404783 attgttgtcaaaatcccgacttaaattctaaaatttaggattttgtgactttcttcaccttcaacgacttaaatccattgtagaatcctaaactatgcaa 1404882  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||| ||||||||||    
T  1404883 aatccatcgattttgattgtgattttacga 1404912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 36429848 - 36429977
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  |||||||||||| ||||  | |||||||||||||||||||||||||||||| || | ||||| |||||| |||||||| |||    
T  36429848 attgttgtcaaaatcccaacttaaatcctataatctaggattttgcgactttcttcaccttcaacgactcaagttcataggagaatctcaaaataggcaa 36429947  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||||||| |||||    
T  36429948 aatccatcgattttgattgcgattgtacga 36429977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 362 - 490
Target Start/End: Original strand, 20063714 - 20063842
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||| ||||||||||    |||||||  |||||||| |||||| ||||||||||||||||||||||||||||||| |||    
T  20063714 attgttgtcaaaatcccgacttaaaacctaaaatccaaggttttgcggttttcttcatcttcaaggacttaaatccatagtagaatcccaaaataggcaa 20063813  T
Q  462 aatccatcgattttgattgcgattttacg 490  Q
    ||| |||||||||| ||||||||||||||    
T  20063814 aattcatcgattttaattgcgattttacg 20063842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 35566082 - 35565954
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    |||||||||||||||  |||||||||  ||||| | | ||||||||||||||||||  ||||| |||| |||||||| ||||||||||||||||| ||||    
T  35566082 ttgttgtcaaaatcccaacttaaatcacaaaattcaggattttgcgactttcttcatattcaatgactcaaatccatggtagaatcccaaaataggcaaa 35565983  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||  ||||||||    
T  35565982 atccatcgattttgattgcagttttacga 35565954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 15588978 - 15588850
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||| ||||||||||| ||||||| || |||||| | | |||||||| ||||||||||||||||| ||| |||| |||||||||||| ||||||||||||    
T  15588978 attgctgtcaaaatcccgacttaa-tcttaaaattcaggattttgcgtctttcttcaccttcaacaactcaaatacatagtagaatctcaaaatagacaa 15588880  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||| |||| |||| |||||||||||||||    
T  15588879 aatcaatcgttttttattgcgattttacga 15588850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 364 - 491
Target Start/End: Complemental strand, 25539353 - 25539226
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||| ||||||| || |||||||||||||| |   | ||||| | ||||||||||||||||||||||||||||||| ||||||| ||||||  |||||    
T  25539353 tgttgttaaaatcccgatttaaatcctaaaattcaagaatttgcaattttcttcaccttcaacgacttaaatccataggagaatccgaaaataagcaaaa 25539254  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    |||||||||||||| |||||||| ||||    
T  25539253 tccatcgattttgactgcgatttaacga 25539226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 362 - 488
Target Start/End: Original strand, 19491855 - 19491982
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatccta--aaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||||||||  || ||||||||||  |||||  | |||||||||||||||||| ||| ||||||| |||||||||| ||||| |||||||||      
T  19491855 attgttgtcaaaatctcgaattaaatcctataaaatctaggattttgcgactttcttcatcttaaacgactcaaatccatagcagaat-ccaaaataggt 19491953  T
Q  460 aaaatccatcgattttgattgcgatttta 488  Q
    |||||||||||||||||||||||||||||    
T  19491954 aaaatccatcgattttgattgcgatttta 19491982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 20063997 - 20064057
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20063997 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 20064057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 364 - 491
Target Start/End: Original strand, 31578007 - 31578133
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||||||||||| |||||||||  ||||||     ||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||  |||||    
T  31578007 tgttgtcaaaatcccgacttaaatgttaaaatttaagattttgcgattttcttcaccttcaacgatttaaatcc-tagtagaatcctaaaataagcaaaa 31578105  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    |||||| ||||||||||| |||||||||    
T  31578106 tccatcaattttgattgcaattttacga 31578133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 20034085 - 20034004
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| || |||||||||||||||||||||||||||||||||||| |||||||| || |||||| |||||||| |||||||    
T  20034085 aaaatccttcaattttgattgcgattttacgagtctcgattttgctactccctttcgacttgaagt-aaagtcccgattttga 20034004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 27523959 - 27523891
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||    
T  27523959 aaaatccttcgattttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagtaaa 27523891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 362 - 468
Target Start/End: Complemental strand, 1690891 - 1690785
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||  | |||||||||| ||||||   | |||||| |||||||||||||||| |||||| | |||||||||| ||||||||||||| |||    
T  1690891 attgttgtcaaaactccgacttaaatcttaaaatttaggattttgtgactttcttcaccttcgacgactcagatccatagtaaaatcccaaaataggcaa 1690792  T
Q  462 aatccat 468  Q
    || ||||    
T  1690791 aacccat 1690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 546
Target Start/End: Complemental strand, 21869184 - 21869099
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgacgac 546  Q
    ||||||| |||||||| |||||||||||| ||||| ||||||| |||||||||||| || |||||| |||||||| |||||||||||    
T  21869184 aaaatccttcgattttaattgcgattttaagagtcccgatttttctattccctttcgacttgaagt-aaagtcccgattttgacgac 21869099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 19262171 - 19262111
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||| || |||||||||    
T  19262171 tcgattttgattgcgattttacgagtcccgattttgctattcccattcgacttgaagtaaa 19262111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 19245855 - 19245937
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| | |||||||||||||||||||||| | | |||||||||||||||||||||| ||||| |||| |||| ||||||||    
T  19245855 aaaatccttagattttgattgcgattttacgatttttgattttgctattccctttcaacttgaagcaaaa-tcccgattttgac 19245937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 7302048 - 7302129
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| |||||||||||||| |||||||||||| |||||||||||  ||| |||||| |||||| |||||||| |||||||    
T  7302048 aaaatccttcgattttgattgcaattttacgagtcccgattttgctaccccccttcaacttgaagt-aaagtcccgattttga 7302129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 362 - 464
Target Start/End: Original strand, 17995055 - 17995157
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| ||||| | |||||||| |||||||||| ||||||||||| ||| |||||| ||||||||| |||| | ||| | ||| ||||||||| |||    
T  17995055 attgttgttaaaattccgacttaaaacctaaaatccagaattttgcgattttattcaccatcaacgactcaaattcgtagcataattccaaaataggcaa 17995154  T
Q  462 aat 464  Q
    |||    
T  17995155 aat 17995157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 974604 - 974673
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtct-cgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||||||||| | ||||||||||| |||||||| || |||||||||    
T  974604 aaaatccttcgattttgattgcgattttacgagtttccgattttgctactccctttcgacttgaagtaaa 974673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 31237839 - 31237771
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||| |||||||||||  | ||||||||||    
T  31237839 aaaatccttcgatattgattgcgattttacgagtcccgattttactattcccttttgaactgaagtaaa 31237771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 465
Target Start/End: Complemental strand, 5395777 - 5395674
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||  |||| |||||| ||||||   | ||||||||||||| |||| ||| || |||| |||||||||| |||||| |||||||| |||    
T  5395777 attgttgtcaaaattttgacctaaatcataaaatataggattttgcgactttattcatcttaaatgactcaaatccatagcagaatctcaaaataggcaa 5395678  T
Q  462 aatc 465  Q
    ||||    
T  5395677 aatc 5395674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 361 - 456
Target Start/End: Original strand, 16766709 - 16766804
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 456  Q
    |||||||||||||||  ||||||||||| ||||||   | ||||| ||| ||| |||||||||||||| | |||||||||| ||||||| ||||||    
T  16766709 tattgttgtcaaaattttgacttaaatcttaaaatttaggattttacgattttattcaccttcaacgaatcaaatccatagcagaatcctaaaata 16766804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 464
Target Start/End: Original strand, 31023262 - 31023325
Alignment:
Q  401 attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 464  Q
    ||||||||||||| ||||| |||||||||| |||| ||||||||||||| ||||||| ||||||    
T  31023262 attttgcgactttattcactttcaacgactcaaattcatagtagaatcctaaaataggcaaaat 31023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 1405049 - 1405103
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattcccttt 514  Q
    ||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||    
T  1405049 aaaatccttcgattttgattgcgattttatgagtaccgattttgctattcccttt 1405103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 466 - 507
Target Start/End: Complemental strand, 21869256 - 21869215
Alignment:
Q  466 catcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  21869256 catcgattttgattgggattttacgagtctcgattttgctat 21869215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 471 - 528
Target Start/End: Complemental strand, 25538997 - 25538940
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||||||||||||| | ||||||| |||||||||||| |||||| |||||    
T  25538997 attttgattgcgattttacgagacccgatttttctattccctttcgacctgatgtaaa 25538940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 527
Target Start/End: Original strand, 30433089 - 30433148
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaa 527  Q
    ||||||||||||||||||||| ||||| ||||||| ||||| | |||| |||||||||||    
T  30433089 tcgattttgattgcgattttatgagtcccgatttttctattgcttttcgacctgaagtaa 30433148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 34578085 - 34578124
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  34578085 tcgattttgattgcgattttacgagtcccgattttgctat 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 34578155 - 34578210
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttc 515  Q
    ||||||| || |||||||||||||||||| ||||| ||||||||||| ||||||||    
T  34578155 aaaatccttcaattttgattgcgattttatgagtcccgattttgctactccctttc 34578210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 362 - 467
Target Start/End: Original strand, 15266082 - 15266187
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||| ||| |||||||||||||| | | ||||||  ||||| |||| |||||| || | ||||||||  || ||| |||||||||  ||    
T  15266082 attgttgtcaaaatcatgatttaaatcctaaaattcaggattttgtaactttattcatcttcaatgattcaaatccatgttataattccaaaataggaaa 15266181  T
Q  462 aatcca 467  Q
    ||||||    
T  15266182 aatcca 15266187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 509
Target Start/End: Complemental strand, 20034155 - 20034114
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattc 509  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  20034155 tcgattttgattgcgattttacgagtcccgactttgctattc 20034114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 454
Target Start/End: Original strand, 34841599 - 34841648
Alignment:
Q  405 tgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    ||||||||| |||||||||||||||| |||||||||| ||||| ||||||    
T  34841599 tgcgactttattcaccttcaacgactcaaatccataggagaataccaaaa 34841648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 459 - 543
Target Start/End: Original strand, 8428487 - 8428570
Alignment:
Q  459 caaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||| |||||||||||||||||||||  | | | |||||| |||||||||||| |||| ||| |||| |||| ||||||||    
T  8428487 caaaatccttcgattttgattgcgattttagaatttttgatttttctattccctttcgacctaaagcaaaa-tcccgattttgac 8428570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 34167571 - 34167611
Alignment:
Q  476 gattgcgattttacgagtctcgattttgctattccctttca 516  Q
    |||||||||||||||| | ||||||||||||||||||||||    
T  34167571 gattgcgattttacgattttcgattttgctattccctttca 34167611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 491
Target Start/End: Complemental strand, 13502601 - 13502570
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||||    
T  13502601 aaaatccatcgattttgattgcgattttacga 13502570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 445 - 491
Target Start/End: Complemental strand, 1690774 - 1690728
Alignment:
Q  445 aatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||| | ||| |||| ||||||||||||||||||||||    
T  1690774 aatcccaaaataggcgaaacccattgattttgattgcgattttacga 1690728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 15588718 - 15588649
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||| ||||||||||| || | |||||||| || ||| ||||| |||||||| ||||    
T  15588718 aaaatccttcgattttggttgcgattttatgattgtcgatttttcttttctctttcgacctgaagcaaaa 15588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 462 - 491
Target Start/End: Original strand, 34841784 - 34841813
Alignment:
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  34841784 aatccatcgattttgattgcgattttacga 34841813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 5e-46; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 362 - 488
Target Start/End: Complemental strand, 21846397 - 21846271
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| || |||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||| ||    
T  21846397 attgttgtcaaaatcccgagttaaatcctaaaatccaggattttgcgacttttttcaccttcaacgactcaaatccatagtagaatctcaaaatagaaaa 21846298  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    |||||||||||||||||||||||||||    
T  21846297 aatccatcgattttgattgcgatttta 21846271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 362 - 486
Target Start/End: Complemental strand, 25146897 - 25146773
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  25146897 attgttgtcaaaatcctgacttaaatcctaaaattcagaattttgcgactttcttcaccttcaacgactcaaattcatagtagaatcccaaaatagacaa 25146798  T
Q  462 aatccatcgattttgattgcgattt 486  Q
    | | |||| ||||| ||||||||||    
T  25146797 agtacatcaattttaattgcgattt 25146773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 13276396 - 13276266
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||||||||||| || |||||||||||||||  | |||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||| ||    
T  13276396 tattgttgtcaaaatcccgatttaaatcctaaaatctaggattttgcgactttcttcatcttcaacgacctaaatccatagtagaatcctaaaataggca 13276297  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    ||||| |||||||||||||||||||||||||    
T  13276296 aaatcaatcgattttgattgcgattttacga 13276266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 9327344 - 9327215
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| |||||||||||||||||||||||||   |  |||||||||||||| |||||||||||||| ||||| |||||| |||||||||||||||||    
T  9327344 attgttgttaaaatcctgacttaaatcctaaaatttagggttttgcgactttctacaccttcaacgactcaaatctatagtaaaatcccaaaatagacaa 9327245  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  9327244 aatccatcgattttgattgcgattttacga 9327215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 9955164 - 9955035
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  |||    
T  9955164 attgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcaacgacttaaatccaatgtagaatcccaaaataagcaa 9955065  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  9955064 aatccatcgattttgattgcgattttacga 9955035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 362 - 488
Target Start/End: Complemental strand, 9352192 - 9352066
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||| |  |||||||||||||||||||||||| |||| ||||| |||| ||| |||||||||||||||    
T  9352192 attgttgtcaaaatcccgacttaaatcctaaaatccagggttttgcgactttcttcaccttcaaagactcaaatctatagcagagtcccaaaatagacaa 9352093  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    ||||| |||||||||||||||||||||    
T  9352092 aatccgtcgattttgattgcgatttta 9352066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 362 - 486
Target Start/End: Complemental strand, 18304940 - 18304815
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttc-aacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||| ||||||| |||| |||||||||||| |||||||||||    
T  18304940 attgttgtcaaaatcccaacttaaatcctaaaatccagtattttgcgactttcttcaccttcaaacgactcaaattcatagtagaatctcaaaatagaca 18304841  T
Q  461 aaatccatcgattttgattgcgattt 486  Q
    ||||||||| ||||||||||||||||    
T  18304840 aaatccatcaattttgattgcgattt 18304815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 364 - 491
Target Start/End: Complemental strand, 19010073 - 19009946
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||||||||||| ||||||||||||||||| | | ||||||||||||| ||||||||||| ||||||||||||||||| ||| | ||||||  |||||    
T  19010073 tgttgtcaaaatccggacttaaatcctaaaattcaggattttgcgacttttttcaccttcaatgacttaaatccatagtaaaattctaaaataagcaaaa 19009974  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||    
T  19009973 tccatcgattttgattgcgattttacga 19009946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 23528656 - 23528785
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||||||||| |||||| | | |||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||| |||    
T  23528656 attgttgtcaaaatcccaacttaaatcttaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaatcctaaaataggcaa 23528755  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||| ||||||||||| |||||||||||||    
T  23528756 aatctatcgattttgaatgcgattttacga 23528785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 364 - 491
Target Start/End: Original strand, 12513283 - 12513410
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||||||||||| ||||||||||||| ||||  | |||||||||||||||||| ||||||||||| |||||||||||| ||||  ||||||  |||||    
T  12513283 tgttgtcaaaatcccgacttaaatcctacaatctaggattttgcgactttcttcagcttcaacgactcaaatccatagtaaaatcataaaataatcaaaa 12513382  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||    
T  12513383 tccatcgattttgattgcgattttacga 12513410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 366 - 489
Target Start/End: Original strand, 13100195 - 13100318
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    ||||||||||||  |||||||| ||||||||  | ||||| ||||||||||||| |||||||||| |||||||||||||||||| ||||||| ||||| |    
T  13100195 ttgtcaaaatcccaacttaaattctaaaatcgaggattttacgactttcttcacgttcaacgactcaaatccatagtagaatcctaaaataggcaaaaac 13100294  T
Q  466 catcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||    
T  13100295 catcgattttgattgcgattttac 13100318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 369 - 491
Target Start/End: Complemental strand, 16125580 - 16125455
Alignment:
Q  369 tcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttctt---caccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    ||||||||||||||||||||||||||| | | ||||||||||||||||   ||||||||||||| ||||||||||||| ||||  ||||||| |||||||    
T  16125580 tcaaaatcctgacttaaatcctaaaattcaggattttgcgactttctttttcaccttcaacgacctaaatccatagtaaaatcttaaaataggcaaaatc 16125481  T
Q  466 catcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||    
T  16125480 cattgattttgattgcgattttacga 16125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 362 - 489
Target Start/End: Complemental strand, 41032799 - 41032672
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  |||||||||| || ||| | | ||||||||| |||||||||||||||||||| |||||||||||||||| | ||||||| |||    
T  41032799 attgttgtcaaaatctcgacttaaatcgtagaattcaggattttgcgattttcttcaccttcaacgactcaaatccatagtagaattctaaaataggcaa 41032700  T
Q  462 aatccatcgattttgattgcgattttac 489  Q
    |||||||||||||| |||||||||||||    
T  41032699 aatccatcgattttaattgcgattttac 41032672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 17056128 - 17055999
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||| ||||||||||||| |||||||||||||||| | ||||||| | ||||| |||||||||||||| | ||||||||||||||   ||||||   ||    
T  17056128 attgtagtcaaaatcctgatttaaatcctaaaatccaggattttgcaattttctccaccttcaacgactcagatccatagtagaattttaaaataagtaa 17056029  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  17056028 aatccatcgattttgattgcgattttacga 17055999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 17869873 - 17869750
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    |||||||||||||||||||||||||| ||||     | ||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||||| ||||    
T  17869873 ttgttgtcaaaatcctgacttaaatcttaaa-----ggattttgcgactttcttcaccttcgacgacctaaatccacagtagaatcctaaaataggcaaa 17869779  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    || | |||||||||||||| |||||||||    
T  17869778 attcttcgattttgattgcaattttacga 17869750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 363 - 491
Target Start/End: Complemental strand, 42180193 - 42180065
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    |||||||||||||||  |||||||| ||||||| | | ||||||||||||||||| |||||||||| | ||||||||||||||||  |||||||| ||||    
T  42180193 ttgttgtcaaaatcccaacttaaattctaaaattcaggattttgcgactttcttccccttcaacgagtcaaatccatagtagaatttcaaaataggcaaa 42180094  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    || ||||||||||||||| |||| |||||    
T  42180093 atacatcgattttgattgtgattctacga 42180065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 9128970 - 9128840
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||| ||||||  ||||||||||||||||    | || |||||||||||||||| || ||||||| ||||  |||||||||||  ||||||||||    
T  9128970 tattgttgttaaaatcacgacttaaatcctaaaaattaggatcttgcgactttcttcacatttaacgactcaaatttatagtagaatcttaaaatagaca 9128871  T
Q  461 aaatccatcgattttgattgcgattttacga 491  Q
    |||| ||||||||||||||||||||| ||||    
T  9128870 aaattcatcgattttgattgcgatttgacga 9128840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 18337650 - 18337547
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||| | |||||||||| | ||||||| ||||| |||||||||||||||| |||||||||| |||| |||||||||| |||    
T  18337650 attgttgtcaaaatcccgacttata-cctaaaatccaggattttgcaactttattcaccttcaacgactcaaatccatagcagaaccccaaaataggcaa 18337552  T
Q  462 aatcc 466  Q
    |||||    
T  18337551 aatcc 18337547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 361 - 437
Target Start/End: Original strand, 30619074 - 30619150
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatcc 437  Q
    ||||||||||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  30619074 tattgttgtcaaaatcccgacttaaatcctaaaatccaggattttgcgattttcttcaccttcaacgactcaaatcc 30619150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 9954896 - 9954828
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||||||    
T  9954896 aaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgaccttaagtaaa 9954828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 25146631 - 25146563
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||    
T  25146631 aaaatccttcgattttgattgcgattttacgatttccgattttgctattccctttcaacctgaagtaaa 25146563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 9351926 - 9351858
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||  |||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  9351926 aaaatcctacgattttgattgcgattttacgagtcccgattttgctattcgctttcgacctgaagtaaa 9351858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 16125318 - 16125250
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| | ||||| |||||||||||| ||||||||||||    
T  16125318 aaaatccttcgattttgattgcgattttacgagtcccaattttactattccctttcgacctgaagtaaa 16125250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 19009811 - 19009743
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| | ||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||    
T  19009811 aaaatcctttgattttgattgcgattttacgagtcccgattttgctattccctttcgatctgaagtaaa 19009743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 21846137 - 21846069
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||||||    
T  21846137 aaaatccttcgattttgattgcgattttaagagtcccgattttgctattccctttcgacctggagtaaa 21846069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 42179934 - 42179866
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||||||||| |||||| ||||||||||||| |||| ||||||||    
T  42179934 aaaatccttcgattttgattgcgattttacgagtttcgattatgctattcccttttaacccgaagtaaa 42179866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 362 - 457
Target Start/End: Complemental strand, 14074499 - 14074404
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatag 457  Q
    |||||||||||||||| | |||||||||||||||   | ||||||||||||||||||  |||||||||| ||||||| |||||||||  |||||||    
T  14074499 attgttgtcaaaatcccgtcttaaatcctaaaatgtaggattttgcgactttcttcatgttcaacgactcaaatccagagtagaatcttaaaatag 14074404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 13100456 - 13100538
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| | ||||||||||||||||||||||||  ||||||||| |||||||||| || |||||| |||||||| ||||||||    
T  13100456 aaaatcctttgattttgattgcgattttacgagttccgattttgccattccctttcgacttgaagt-aaagtcccgattttgac 13100538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 529
Target Start/End: Complemental strand, 9321598 - 9321529
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||||||||||||||||||||  |||||||||||||   |||| |||||||||||||    
T  9321598 aaaatccttcgattttgattgcgattttacgagttccgattttgctattttttttctacctgaagtaaaa 9321529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 361 - 449
Target Start/End: Complemental strand, 12800711 - 12800623
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcc 449  Q
    ||||||||| |||||||  ||||||||||||||||   | ||||| ||||||||||||| |||||||||| ||||| |||||| |||||    
T  12800711 tattgttgtgaaaatcccaacttaaatcctaaaatttaggattttacgactttcttcacattcaacgactcaaatctatagtaaaatcc 12800623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 14074346 - 14074278
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||| ||||||| ||||  | |||||||||||||||||| ||||||||||||    
T  14074346 aaaatccttcgattttgattgtgattttatgagttccaattttgctattccctttcgacctgaagtaaa 14074278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 373 - 466
Target Start/End: Original strand, 8772715 - 8772809
Alignment:
Q  373 aatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatccc-aaaatagacaaaatcc 466  Q
    ||||| ||||||||||| ||||||| ||||||||||||||| |  | ||||||| ||| |||||||||| ||| |||| |||| |||||||||||    
T  8772715 aatcccgacttaaatcccaaaatccagaattttgcgactttgtgtagcttcaacaactcaaatccatagcagagtcccaaaaaaagacaaaatcc 8772809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 514
Target Start/End: Complemental strand, 9128701 - 9128647
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattcccttt 514  Q
    ||||||| ||||||||||| | ||||||||||||| |||||||||||||||||||    
T  9128701 aaaatccttcgattttgatcgtgattttacgagtcccgattttgctattcccttt 9128647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 514
Target Start/End: Original strand, 16434775 - 16434829
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattcccttt 514  Q
    ||||||| |||||||||||||| ||||||||| | ||||||||||||||||||||    
T  16434775 aaaatccttcgattttgattgcaattttacgattttcgattttgctattcccttt 16434829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 17197392 - 17197311
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||  ||||||||||||||||  ||||||||||| |||||||| || |||||| |||||||| |||||||    
T  17197392 aaaatccttcgattttagttgcgattttacgagttccgattttgctactccctttcgacttgaagt-aaagtcccgattttga 17197311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 520
Target Start/End: Complemental strand, 17055782 - 17055722
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacct 520  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| | || ||||||| ||||    
T  17055782 aaaatccttcgattttgattgcgattttacgagtcccgattttacaatcccctttcgacct 17055722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 23528922 - 23528990
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| |||| || || |||| ||| |||||||| ||||    
T  23528922 aaaatccttcgattttgattgcgattttacgagtcccgatcttactgttcctttttaacctgaaataaa 23528990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 470 - 509
Target Start/End: Complemental strand, 12002790 - 12002751
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattc 509  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  12002790 gattttgattgcgattttacgagtcccgattttgctattc 12002751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 523
Target Start/End: Complemental strand, 17869613 - 17869550
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaa 523  Q
    ||||||| | ||||||||||||||||||||| ||| |||||||||| ||||||||  |||||||    
T  17869613 aaaatcctttgattttgattgcgattttacgtgtcccgattttgctcttcccttttgacctgaa 17869550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 41032628 - 41032554
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||||  |||||||||||||| | || |||||||| ||| ||||||||||||||||||| |||| ||||||||    
T  41032628 tcgattttagttgcgattttacgattatcaattttgctcttctctttcaacctgaagtaaaa-tccctattttgac 41032554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 428
Target Start/End: Complemental strand, 34478899 - 34478833
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacga 428  Q
    |||||||| ||||||| |||||||||| ||||||   | |||||| |||||||||||||||||||||    
T  34478899 attgttgttaaaatcccgacttaaatcttaaaatttgggattttgtgactttcttcaccttcaacga 34478833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 18228278 - 18228319
Alignment:
Q  439 tagtagaatcccaaaatagacaaaatccatcgattttgattg 480  Q
    ||||||||||||||||||| ||||||||||| ||||||||||    
T  18228278 tagtagaatcccaaaataggcaaaatccatcaattttgattg 18228319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 509
Target Start/End: Complemental strand, 27502218 - 27502169
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattc 509  Q
    ||||||| |||||||||||||| |||||| |||||||| |||||||||||    
T  27502218 aaaatccttcgattttgattgcaattttatgagtctcggttttgctattc 27502169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 451 - 491
Target Start/End: Original strand, 32881416 - 32881456
Alignment:
Q  451 aaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    ||||||| |||||| ||||||||||||||||||||||||||    
T  32881416 aaaataggcaaaattcatcgattttgattgcgattttacga 32881456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 520
Target Start/End: Original strand, 47786124 - 47786184
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacct 520  Q
    ||||||| ||||||||| ||| |||||||||| | ||||||||||| ||| ||||||||||    
T  47786124 aaaatccttcgattttggttgtgattttacgattgtcgattttgctcttctctttcaacct 47786184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 12513537 - 12513619
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| | ||||||| |||||||||||| | | ||||||||||| ||| ||||  |||||||| |||| |||||||||||||    
T  12513537 aaaatcctttgattttggttgcgattttacaattgtcgattttgctcttctcttttgacctgaagcaaaa-tcccaattttgac 12513619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 32881586 - 32881667
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| |||||||   |||||||||||||| | ||||||||||| ||| ||||||| |||||| |||| |||| |||||||    
T  32881586 aaaatccttcgatttcagttgcgattttacgattgtcgattttgcttttctctttcaatctgaagcaaaa-tcccgattttga 32881667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 515
Target Start/End: Complemental strand, 13276109 - 13276064
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttc 515  Q
    |||| ||||||||||||||||||||  ||||||||||||| |||||    
T  13276109 gattctgattgcgattttacgagtcctgattttgctattctctttc 13276064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 18304739 - 18304710
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  18304739 aaaatccatcgattttgattgcgattttac 18304710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 23528857 - 23528886
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  23528857 aaaatccatcgattttgattgcgattttac 23528886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 365 - 466
Target Start/End: Complemental strand, 27917578 - 27917477
Alignment:
Q  365 gttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaat 464  Q
    ||||||||||||| ||||||||| || |||||  | ||||||||| ||| || ||||||||| ||  |||| ||||| |||||| ||| |||  ||||||    
T  27917578 gttgtcaaaatcccgacttaaattctgaaatctaggattttgcgattttatttaccttcaacaacccaaattcatagcagaatcacaagataagcaaaat 27917479  T
Q  465 cc 466  Q
    ||    
T  27917478 cc 27917477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 3e-44; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 362 - 489
Target Start/End: Original strand, 39182260 - 39182386
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||| |||||||||||||||||||||||||||  | |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||    
T  39182260 attgttgacaaaatcctgacttaaatcctaaaatctaggattttgcgactt-cttcaccttcaacgactgaaatccatagtagaatcccaaaataggcaa 39182358  T
Q  462 aatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||| ||||||||||||    
T  39182359 aatccatcgattttggttgcgattttac 39182386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 8343929 - 8343800
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||| || | ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||   ||    
T  8343929 attgttgtcaaaatcttggcctaaatcctaaaatcctggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatatgaaa 8343830  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||| ||||| |||||||||||||||    
T  8343829 aatccatcaattttaattgcgattttacga 8343800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 363 - 491
Target Start/End: Original strand, 5058530 - 5058658
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||| ||||||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||||  ||||||| ||||    
T  5058530 ttgttgtcaaaatcccgacttaaatcctaaaattcagaattttgcgattttcttcaccttcaacgacctaaatccatagtagaatcttaaaataggcaaa 5058629  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    ||||  |||||||||||||||||||||||    
T  5058630 atcctacgattttgattgcgattttacga 5058658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 22687793 - 22687664
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||| | | | |||||||||||||||| ||||||| ||| |||||||| | ||||||||||||||| |||    
T  22687793 attgttgtcaaaatcccgacttaaatcctaaaattcaggaatttgcgactttcttcaacttcaacaactcaaatccatcgcagaatcccaaaataggcaa 22687694  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  22687693 aatccatcgattttgattgcgattttacga 22687664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 364 - 491
Target Start/End: Complemental strand, 8346660 - 8346533
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    |||||||||||||||||| |||||  ||||||   | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||    
T  8346660 tgttgtcaaaatcctgacctaaatattaaaatttaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaataggaaaaa 8346561  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    |||||||||||| |||||||||||||||    
T  8346560 tccatcgattttaattgcgattttacga 8346533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 7730471 - 7730343
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||| ||| ||| ||||||| |||||||| |||||||||  ||    
T  7730471 attgttgtcaaaatcctgacttaaatcctaaaatccagg-ttttgcgactttcttcacctttaacaactcaaatccacagtagaattccaaaataggaaa 7730373  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||| ||||||||||    
T  7730372 aatccatcgattttgattgagattttacga 7730343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 369 - 486
Target Start/End: Original strand, 8571250 - 8571367
Alignment:
Q  369 tcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccat 468  Q
    ||||||||| |||||||||| |||||||| | |||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||| |||| ||||    
T  8571250 tcaaaatcccgacttaaatcataaaatccaggattttgcgactttcttcacctttaacgactcaaatccatagtagaatcctaaaatagagaaaaaccat 8571349  T
Q  469 cgattttgattgcgattt 486  Q
    ||||||||||||||||||    
T  8571350 cgattttgattgcgattt 8571367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 360 - 489
Target Start/End: Original strand, 11326384 - 11326513
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    ||||||||||||||||||  ||||||||||||||||   | |||||||||||||||||||||||| ||||| |||||||||||||||||  ||||||| |    
T  11326384 gtattgttgtcaaaatcccaacttaaatcctaaaatttaggattttgcgactttcttcaccttcagcgactaaaatccatagtagaatcttaaaataggc 11326483  T
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    |||||| |||||||||||||||||||||||    
T  11326484 aaaatctatcgattttgattgcgattttac 11326513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 24725606 - 24725477
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||||||||||||||   ||||| |||||||||||||||||||| ||| ||||||||||||||||| |||||||| |||    
T  24725606 attgttgtcaaaatccagacttaaatcctaaaatccaagattttacgactttcttcaccttcaacaactcaaatccatagtagaatcgcaaaataggcaa 24725507  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||| ||||||||| |||||| ||||    
T  24725506 aatccatcaattttgattacgatttgacga 24725477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 356 - 491
Target Start/End: Original strand, 14055245 - 14055380
Alignment:
Q  356 acatgtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 455  Q
    ||||| |||||||| |||||||  ||||| ||||||||||||   |||||||||||||||||||||||||||||| ||||| |||||||||| | |||||    
T  14055245 acatgcattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaat 14055344  T
Q  456 agacaaaatccatcgattttgattgcgattttacga 491  Q
    || |||||||||| ||||||||||||||||||||||    
T  14055345 aggcaaaatccatagattttgattgcgattttacga 14055380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 356 - 491
Target Start/End: Original strand, 14365273 - 14365408
Alignment:
Q  356 acatgtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 455  Q
    ||||| |||||||| |||||||  ||||| ||||||||||||   |||||||||||||||||||||||||||||| ||||| |||||||||| | |||||    
T  14365273 acatgcattgttgtgaaaatccccacttatatcctaaaatccaagattttgcgactttcttcaccttcaacgactcaaatctatagtagaattctaaaat 14365372  T
Q  456 agacaaaatccatcgattttgattgcgattttacga 491  Q
    || |||||||||| ||||||||||||||||||||||    
T  14365373 aggcaaaatccatagattttgattgcgattttacga 14365408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 361 - 489
Target Start/End: Complemental strand, 44944979 - 44944847
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcac----cttcaacgacttaaatccatagtagaatcccaaaata 456  Q
    ||||||||||||||||| ||||||||||||||||| | | |||||||||||||||||||    ||||||||| | |||||||||||||||||| ||||||    
T  44944979 tattgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcactcaccttcaacgattcaaatccatagtagaatcctaaaata 44944880  T
Q  457 gacaaaatccatcgattttgattgcgattttac 489  Q
    | |||||||||||||||||||||| ||||||||    
T  44944879 gtcaaaatccatcgattttgattgggattttac 44944847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 362 - 488
Target Start/End: Original strand, 4247356 - 4247482
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  | |||||||||||||| | | ||||||  ||||||||||| |||||| |||||||||||||||||||||||||||||| |||    
T  4247356 attgttgtcaaaatcccaatttaaatcctaaaattcaggattttgtaactttcttcactttcaacaacttaaatccatagtagaatcccaaaataggcaa 4247455  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    ||| |||||||||||||||||||||||    
T  4247456 aattcatcgattttgattgcgatttta 4247482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 8330174 - 8330045
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||||||| ||||| ||||||| |   |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||  ||    
T  8330174 attgttgtcaaaatcctgacctaaattctaaaattcatgattttgcgactttcttcaccttcaacgattcaaatccatagtagaatcccaaaataggaaa 8330075  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||| |||||| |||||||||||||||    
T  8330074 aattcattgattttaattgcgattttacga 8330045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 362 - 488
Target Start/End: Complemental strand, 9685373 - 9685247
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  |||||| ||||||||||   | ||||||||||||| |||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  9685373 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagacaa 9685274  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    |||||||||||||| ||||||||||||    
T  9685273 aatccatcgattttaattgcgatttta 9685247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 5715290 - 5715418
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||| | | ||||||||||||| | |||||||||| |||||||| ||||||||||| ||||||||  |||    
T  5715290 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgacttt-tacaccttcaacaacttaaattcatagtagaattccaaaataagcaa 5715388  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||| ||||||||||    
T  5715389 aattcatcgattttgattgtgattttacga 5715418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 24990200 - 24990071
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | ||||||||||| |||||   | |||||| ||||||||| |||| |||||||| |||||||||||||||||| ||||||| |||    
T  24990200 attgttgtcaaaattccgacttaaatccaaaaatttaggattttgtgactttctttacctccaacgactcaaatccatagtagaatcctaaaataggcaa 24990101  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||||||||| |||||||||    
T  24990100 aatccatcgattttgattgcaattttacga 24990071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 26281438 - 26281310
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | |||||||||| |||||| | | |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||||  |||    
T  26281438 attgttgtcaaaattccgacttaaatcataaaattcaggattttgcgactttcttcaccttcaacgactcaaatccattgtagaattccaaaataagcaa 26281339  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||| ||||||||| ||||    
T  26281338 aatccatcgattttg-ttgcgatttaacga 26281310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 27221418 - 27221547
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| |||||||  |||||||| ||||||| | | |||||||||||||||||| ||||||||||| |||| ||||||||||||  ||||| | |||    
T  27221418 attgttgttaaaatcccaacttaaattctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatacatagtagaatcttaaaattggcaa 27221517  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  27221518 aatccatcgattttgattgcgattttacga 27221547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 401 - 491
Target Start/End: Original strand, 17811386 - 17811476
Alignment:
Q  401 attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||| |||||| |||||||||||||||| ||||||||||||||||   ||||||||||||||| |||||||||||||||||||||||||    
T  17811386 attttgtgacttttttcaccttcaacgactcaaatccatagtagaattttaaaatagacaaaatcgatcgattttgattgcgattttacga 17811476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 361 - 484
Target Start/End: Complemental strand, 21846555 - 21846433
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagaca 460  Q
    ||||||||||||||||| ||||||||| ||||||| | | ||||||||||||| ||||| |||||||||| | |||||||||||||| | |||| ||  |    
T  21846555 tattgttgtcaaaatcccgacttaaattctaaaattcaggattttgcgacttt-ttcacattcaacgactcacatccatagtagaattctaaaacaggta 21846457  T
Q  461 aaatccatcgattttgattgcgat 484  Q
    ||||| ||||||||||||||||||    
T  21846456 aaatcaatcgattttgattgcgat 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 362 - 492
Target Start/End: Complemental strand, 26617605 - 26617471
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatcc--atagtagaatcccaaa--atag 457  Q
    |||||| | ||||| ||||||| ||||||||||| | | ||||||||||||| ||||||||||||||| ||||| |  |||||||||| | |||  ||||    
T  26617605 attgttttgaaaattctgactttaatcctaaaattcaggattttgcgacttttttcaccttcaacgacataaattcatatagtagaattctaaaatatag 26617506  T
Q  458 acaaaatccatcgattttgattgcgattttacgag 492  Q
     ||||||| ||||||||||||||||||||||||||    
T  26617505 gcaaaatctatcgattttgattgcgattttacgag 26617471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 371 - 491
Target Start/End: Original strand, 11324988 - 11325107
Alignment:
Q  371 aaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcg 470  Q
    ||||||| ||||||||||||||||| |   |||||| || |||||||||||||||||||| ||||||||| |||||| | ||||||| |||||| |||      
T  11324988 aaaatcccgacttaaatcctaaaattcatgattttgggattttcttcaccttcaacgactcaaatccataatagaattctaaaataggcaaaattcat-a 11325086  T
Q  471 attttgattgcgattttacga 491  Q
    ||||||||||||| |||||||    
T  11325087 attttgattgcgaatttacga 11325107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 402 - 488
Target Start/End: Original strand, 1977692 - 1977778
Alignment:
Q  402 ttttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgatttta 488  Q
    |||||||| ||| | |||||||||||||| |||||||||||||||||| ||||||  |||||| | |||||||||||||||||||||    
T  1977692 ttttgcgattttttccaccttcaacgactcaaatccatagtagaatcctaaaatatgcaaaattcgtcgattttgattgcgatttta 1977778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 468 - 543
Target Start/End: Original strand, 17811622 - 17811696
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||||||||| || |||||||||||||||||||  ||||||||| |||||||| ||||||||    
T  17811622 tcgattttgattgcgattttacgaatcccgattttgctattcccttttgacctgaagt-aaagtcccgattttgac 17811696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 24989637 - 24989555
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||| |||||||||||| |||||||| ||||||||||| |||| |||| |||||||| ||||||||    
T  24989637 aaaatccttcgattttgattgccattttacgagtcccgattttgttattccctttcgacctaaagt-aaagtcccgattttgac 24989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 471 - 542
Target Start/End: Complemental strand, 25842583 - 25842513
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| || |||||| ||||||||||||||||    
T  25842583 attttgattgcgattttacgagtcccgattttgctactccctttcgacttgaagt-aaagtcccaattttga 25842513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 9685157 - 9685089
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||| ||| ||||||||    
T  9685157 aaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttcgaccagaagtaaa 9685089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 471 - 543
Target Start/End: Complemental strand, 20570737 - 20570666
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||| ||||||| |||||| ||||||||||||||||||||| | |||||| ||||||||    
T  20570737 attttgattgcgattttatgagtctcaattttgttattccctttcaacctgaagt-agagtcccgattttgac 20570666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 431 - 491
Target Start/End: Complemental strand, 20570945 - 20570885
Alignment:
Q  431 taaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  20570945 taaatctatagtagaatctaaaaatagacaaaatccatcgattttgattgcaattttacga 20570885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 468 - 515
Target Start/End: Complemental strand, 8254039 - 8253992
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttc 515  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  8254039 tcgattttgattgcgattttacgagtctcgattttgctactccctttc 8253992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 366 - 428
Target Start/End: Original strand, 4574475 - 4574537
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacga 428  Q
    |||| |||||| |||||||||||||||||||| |||||||||||||||  |||||||||||||    
T  4574475 ttgtgaaaatcatgacttaaatcctaaaatccagaattttgcgactttactcaccttcaacga 4574537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 401 - 491
Target Start/End: Complemental strand, 27510033 - 27509943
Alignment:
Q  401 attttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||| ||||||||| | |||||| | ||||| ||||||||||   ||||||| |||||| |||| |||||||||||||||||||||    
T  27510033 attttgcgattttcttcacatccaacgattcaaatctatagtagaatttaaaaataggcaaaattcatcaattttgattgcgattttacga 27509943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 470 - 543
Target Start/End: Original strand, 4575006 - 4575078
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||||||| | | |||||| ||||||||||||||||||||| |||| || ||||||||||    
T  4575006 gattttgattgcgattttacgatttttgattttactattccctttcaacctgaag-aaaaatctcaattttgac 4575078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 362 - 465
Target Start/End: Original strand, 30294175 - 30294275
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  |||||||||||||||||| | |||||| || ||| ||||||||   ||||| |||||||||| | |||| |||||||| |||    
T  30294175 attgttgtcaaaatcccaacttaaatcctaaaatccaggattttgtgattttattcacctt---cgactcaaatccatagcaaaatctcaaaataggcaa 30294271  T
Q  462 aatc 465  Q
    ||||    
T  30294272 aatc 30294275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 528
Target Start/End: Original strand, 8304352 - 8304420
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||| ||||||||||||| ||||||||||| || ||||| || |||||||||    
T  8304352 aaaatccttcgattttgattgtgattttacgagtcgcgattttgctactctctttcgacttgaagtaaa 8304420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 5058794 - 5058876
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||| ||||||||| |  |||||||||||||||||||  | ||||||| |||||||| ||||||||    
T  5058794 aaaatccttcgattttgattgcaattttacgaattccgattttgctattcccttttgatctgaagt-aaagtcccgattttgac 5058876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 515
Target Start/End: Original strand, 5715551 - 5715606
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttc 515  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| ||||| ||||||    
T  5715551 aaaatccctcgattttgattgcgattttacgagtcccgatttttctatttcctttc 5715606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 27221680 - 27221762
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| |||||||||||||||||||||||| || |||||||||||| | ||||| |||| ||   |||||||| |||||||    
T  27221680 aaaatccttcgattttgattgcgattttacgaatcccgattttgctatactctttcgacctaaaagtaaagtcccgattttga 27221762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 1977814 - 1977883
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| |||||||||||||||||||||||| | |||||||| || ||| ||||| |||||||| ||||    
T  1977814 aaaatccttcgattttgattgcgattttacgattgtcgatttttctcttctctttcgacctgaagcaaaa 1977883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 468 - 528
Target Start/End: Complemental strand, 23618284 - 23618224
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||||||||||||||||  ||||| ||||||||||| ||||||||||| | |||||||    
T  23618284 tcgattttgattgcgattttcggagtcccgattttgctactccctttcaacttaaagtaaa 23618224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 4247622 - 4247704
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| | || ||||||||||||||||||| || | |||||  ||||||||||| || |||||| |||||||||||||||||    
T  4247622 aaaatcctttgaatttgattgcgattttacgaatcccaatttttgtattccctttcgacttgaagt-aaagtcccaattttgac 4247704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 10285758 - 10285684
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||||||||| | | |||||| || ||| ||||| ||||||||||||| |||| ||||||||    
T  10285758 tcgattttgattgcgattttacgattgttgatttttctcttctctttcgacctgaagtaaaa-tcccgattttgac 10285684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 26565411 - 26565329
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||| ||||||||||| | ||| ||||| | |||||||| ||||||||| |||  |||||||||||||    
T  26565411 aaaatccttcgattttgattacgattttacgattttcgtttttgttcttcccttttaacctgaag-aaagatcccaattttgac 26565329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 44944700 - 44944626
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||| |||||||||||||||||| ||  ||||||||| |||||| | ||||||| |||||||| ||||||||    
T  44944700 tcgattttaattgcgattttacgagtcccgcatttgctatttcctttcgatctgaagt-aaagtcccgattttgac 44944626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 448
Target Start/End: Complemental strand, 8630087 - 8630001
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatc 448  Q
    |||||||||||||||  ||||||| ||| ||||||  | ||||||| |||||  | | ||||||||||| |||||||||||||||||    
T  8630087 attgttgtcaaaatcgcgacttaagtcccaaaatctaggattttgcaactttacttaacttcaacgactcaaatccatagtagaatc 8630001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 471 - 517
Target Start/End: Complemental strand, 17809044 - 17808998
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaa 517  Q
    ||||||||||||||||||||| | |||||||||||||||| ||||||    
T  17809044 attttgattgcgattttacgattttcgattttgctattccatttcaa 17808998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 362 - 456
Target Start/End: Complemental strand, 26565757 - 26565663
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaata 456  Q
    |||||||||||||| ||| |||||||| |||||| | ||||||||  ||||| ||||| || ||||| | |||| ||||| |||||| |||||||    
T  26565757 attgttgtcaaaattctgccttaaatcataaaattcagaattttgtaactttattcacttttaacgattcaaattcatagcagaatctcaaaata 26565663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 462 - 542
Target Start/End: Complemental strand, 1981186 - 1981107
Alignment:
Q  462 aatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||| |||||||||||| |||||||||||||  | ||||| ||| |||||||| || |||||| |||||||| |||||||    
T  1981186 aatccttcgattttgattacgattttacgagttccaatttttctaatccctttcgacttgaagt-aaagtcccgattttga 1981107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 17741910 - 17741981
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattc--cctttcaacctgaagtaaaa 529  Q
    ||||||| || ||||||||||| ||||||||| | |||||||||||||||   ||||| |||||||||||||    
T  17741910 aaaatccttcaattttgattgcaattttacgattttcgattttgctattctttctttcgacctgaagtaaaa 17741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 21157903 - 21157811
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    ||||||||| |||| |||||||||||| |||||| | |  ||||||||||||  |||| | |||||||| |||||||||| | ||||| ||||    
T  21157903 attgttgtcgaaattctgacttaaatcttaaaattcagggttttgcgactttactcacttacaacgactcaaatccatagcaaaatcctaaaa 21157811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 25842664 - 25842625
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  25842664 tcgattttgattgcgattttacgagtcccgactttgctat 25842625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 471 - 528
Target Start/End: Original strand, 11326560 - 11326617
Alignment:
Q  471 attttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||| ||||||| ||||| | |||||||||||| ||||| ||||||| ||||    
T  11326560 attttgattgtgattttaagagtcccaattttgctattctctttccacctgaaataaa 11326617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 14055523 - 14055592
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||| |||||||||||| | | |||||||||||  || ||||| |||||||| ||||    
T  14055523 aaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaa 14055592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 14365551 - 14365620
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||| |||||||||||| | | |||||||||||  || ||||| |||||||| ||||    
T  14365551 aaaatccttcgattttggttgcgattttaccattgtcgattttgctcatctctttcgacctgaagcaaaa 14365620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 17811549 - 17811578
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  17811549 aaaatccatcgattttgattgcgattttac 17811578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 24725400 - 24725371
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  24725400 aaaatccatcgattttgattgcgattttac 24725371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 90; Significance: 5e-43; HSPs: 3)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 8443 - 8572
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||||||||||||||||||   |||||||||||||||||||||||||||||||||||| || ||||||||||||||||  |||    
T  8443 attgttgtcaaaatccctacttaaatcctaaaatccacgattttgcgactttcttcaccttcaacgacttaaatctattgtagaatcccaaaataagcaa 8542  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||| ||||||||||||||||||||||    
T  8543 aatccattgattttgattgcgattttacga 8572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 8707 - 8788
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| || |||||||||||||||||||||||  |||||||| ||||||||||| ||||||||| |||||||| |||||||    
T  8707 aaaatccttcaattttgattgcgattttacgagttccgattttgttattccctttcgacctgaagt-aaagtcccgattttga 8788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 8642 - 8671
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  8642 aaaatccatcgattttgattgcgattttac 8671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 90; Significance: 5e-43; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 5362092 - 5361963
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||| | | |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||| |||    
T  5362092 attgttgtcaaaatcccgacttaaatcctaaaattcaggattttgcgactttcttcatcttcaacgactcaaatccatagtagaattccaaaataggcaa 5361993  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    || |||||||||||||||| ||||||||||    
T  5361992 aacccatcgattttgattgagattttacga 5361963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 487
Target Start/End: Complemental strand, 8011345 - 8011220
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||  ||| |||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||   |||    
T  8011345 attgttgtcaaaatcccaactcaaatcctaaaattcaggattttgcgactttcttcaccttcaacgactcaaatccatagtagaatcccaaaatgagcaa 8011246  T
Q  462 aatccatcgattttgattgcgatttt 487  Q
    ||| ||||||||||||||||||||||    
T  8011245 aattcatcgattttgattgcgatttt 8011220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 8889228 - 8889357
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||| ||||||||||| ||||||||||||||||||| | |||||| || |||||||||| ||||||||| |||| |||| |||||||||||||||| |||    
T  8889228 attgatgtcaaaatcccgacttaaatcctaaaatccaggattttgtgaatttcttcaccatcaacgactcaaattcataatagaatcccaaaataggcaa 8889327  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  8889328 aattcatcgattttgattgcgattttacga 8889357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 360 - 491
Target Start/End: Original strand, 9770110 - 9770241
Alignment:
Q  360 gtattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||| ||||||  ||||||||| ||||||||  | |||||| |||||| |||||||||||||||| |||||||||||||||||| |||||||||    
T  9770110 gtattgttgttaaaatctcgacttaaattctaaaatctaggattttgtgacttttttcaccttcaacgactcaaatccatagtagaatcctaaaatagac 9770209  T
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    |||||| ||| |||||||||||||||||||||    
T  9770210 aaaatctatcaattttgattgcgattttacga 9770241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 362 - 488
Target Start/End: Complemental strand, 13551751 - 13551625
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||  |||||| ||||||||||   | ||||||||||||| |||||||||||||||| ||||||||| ||||||  ||||||||||||    
T  13551751 attgttgtcaaaatctcgacttatatcctaaaatttaggattttgcgacttttttcaccttcaacgactcaaatccatattagaatttcaaaatagacaa 13551652  T
Q  462 aatccatcgattttgattgcgatttta 488  Q
    |||||||||||||| ||||||||||||    
T  13551651 aatccatcgattttaattgcgatttta 13551625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 13023567 - 13023699
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcct-gaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatccc--aaaataga 458  Q
    ||||||||||||||||  |||||||||||||||   | | ||||||||||||||||||||||||| |||| |||||||||||||||||||  ||||||||    
T  13023567 attgttgtcaaaatcccaacttaaatcctaaaaatttaggattttgcgactttcttcaccttcaatgactcaaatccatagtagaatcccaaaaaataga 13023666  T
Q  459 caaaatccatcgattttgattgcgattttacga 491  Q
     |||||| |||||||||||||||||||||||||    
T  13023667 taaaatcaatcgattttgattgcgattttacga 13023699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 361 - 491
Target Start/End: Complemental strand, 9911542 - 9911411
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaa-tcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac 459  Q
    |||||||||| |||||| || ||||| ||||||||| |   ||||||| ||||||||||||||||||| | ||||||||||||||||||| ||||| | |    
T  9911542 tattgttgtctaaatcccgatttaaaatcctaaaattcaagattttgcaactttcttcaccttcaacggcctaaatccatagtagaatcctaaaattggc 9911443  T
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||||    
T  9911442 aaaatccatcgattttgattgcgattttacga 9911411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 10142899 - 10143028
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| ||||||| ||||||||| |||||||     ||||||||||||||| ||||||||| |||| || ||||||||| ||| |||||||||||||    
T  10142899 attgttgtgaaaatcccgacttaaattctaaaatttaatattttgcgactttctccaccttcaatgactcaagtccatagtataattccaaaatagacaa 10142998  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||| ||||||||||    
T  10142999 aatccatcgattttgattgtgattttacga 10143028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 363 - 466
Target Start/End: Original strand, 7044728 - 7044831
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||||| |||||||||||||||||||   ||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||||  ||||    
T  7044728 ttgttgtcaaaatcccgacttaaatcctaaaatccatgattttgcaactttattcaccttcaacgactcaaatccatagcagaatcccaaaataagcaaa 7044827  T
Q  463 atcc 466  Q
    ||||    
T  7044828 atcc 7044831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 362 - 491
Target Start/End: Original strand, 36120824 - 36120953
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | || ||||||  ||||||   | ||||||||| |||||||||||||||||||||||||||||| || ||| | ||||||  |||    
T  36120824 attgttgtcaaaattccgatttaaattttaaaatttaggattttgcgattttcttcaccttcaacgacttaaatccataataaaattctaaaataagcaa 36120923  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| ||||||||||||||||||||||||||    
T  36120924 aattcatcgattttgattgcgattttacga 36120953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 364 - 491
Target Start/End: Original strand, 5375666 - 5375793
Alignment:
Q  364 tgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaa 463  Q
    ||||||||||||||  || ||||| |||||||     |||||||||||||||||||||||||||||| |||| |||| ||||||   |||||||||||||    
T  5375666 tgttgtcaaaatcccaacctaaattctaaaatttaagattttgcgactttcttcaccttcaacgactaaaattcataatagaattttaaaatagacaaaa 5375765  T
Q  464 tccatcgattttgattgcgattttacga 491  Q
    | |||||| |||||||||||||||||||    
T  5375766 ttcatcgactttgattgcgattttacga 5375793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 23065092 - 23064963
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| |||| || ||||||||| ||||||||| | ||||||  ||||||||||| |||||||||| |||||||| ||||||| | |||||||   |    
T  23065092 attgttgttaaaaccccgacttaaattctaaaatccagtattttgtaactttcttcacattcaacgactcaaatccattgtagaattctaaaataggtca 23064993  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    |||||||||||||| ||||| |||||||||    
T  23064992 aatccatcgattttaattgcaattttacga 23064963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 363 - 491
Target Start/End: Original strand, 17466080 - 17466208
Alignment:
Q  363 ttgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaa 462  Q
    ||||||||||||| |  ||||||||| ||||||   | ||||||||| |||||||| ||| || |||| ||||||||| |||||||| ||||||  ||||    
T  17466080 ttgttgtcaaaattccaacttaaatcttaaaatttaggattttgcgattttcttcatctttaaggactcaaatccataatagaatcctaaaataagcaaa 17466179  T
Q  463 atccatcgattttgattgcgattttacga 491  Q
    |||||||||||| ||||||||||||||||    
T  17466180 atccatcgatttagattgcgattttacga 17466208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 491
Target Start/End: Original strand, 37240303 - 37240386
Alignment:
Q  407 cgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatccatcgattttgattgcgattttacga 491  Q
    ||||||| |||||||||||||||| ||||||||||||||| |||||||||| || ||| ||||||||||||||||||||||||||    
T  37240303 cgacttttttcaccttcaacgactcaaatccatagtagaa-cccaaaataggcataattcatcgattttgattgcgattttacga 37240386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 9770378 - 9770460
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||| ||||||||    
T  9770378 aaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctttcgacctaaagt-aaagtcccgattttgac 9770460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 18459837 - 18459733
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| ||||||| |||| ||||||||||||||   ||||||||||| | ||||| |||||||||| |||||||||| ||||||| ||||||| |||    
T  18459837 attgttgtaaaaatcccgactaaaatcctaaaatccaagattttgcgactgtattcactttcaacgactcaaatccatagcagaatcctaaaataggcaa 18459738  T
Q  462 aatcc 466  Q
    |||||    
T  18459737 aatcc 18459733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 466
Target Start/End: Original strand, 7452420 - 7452523
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| ||||||| ||||||||| ||||||||| ||||||||| ||||| ||||||||||||||| | |||||||||| || ||| || |||| |||    
T  7452420 attgttgtgaaaatcccgacttaaattctaaaatccagaattttgcaactttattcaccttcaacgac-tcaatccatagtggattcctaatataggcaa 7452518  T
Q  462 aatcc 466  Q
    |||||    
T  7452519 aatcc 7452523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 366 - 466
Target Start/End: Original strand, 7815561 - 7815661
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    |||| ||||||| ||||||||||||||||| | | |||||| |||||| |||| ||| | ||||| ||| |||||||||||||||||||||| |||||||    
T  7815561 ttgttaaaatcccgacttaaatcctaaaatacagcattttgtgactttattcagcttaagcgactcaaacccatagtagaatcccaaaataggcaaaatc 7815660  T
Q  466 c 466  Q
    |    
T  7815661 c 7815661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 460 - 513
Target Start/End: Complemental strand, 8010999 - 8010946
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctt 513  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  8010999 aaaatccttcgattttgattgcgattttacgagtcccgattttgctattccctt 8010946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 362 - 455
Target Start/End: Original strand, 24719517 - 24719610
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaat 455  Q
    |||||||||||||||  ||||||| | ||||||| |   ||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||    
T  24719517 attgttgtcaaaatctcgacttaatttctaaaattcaagattttgcgactttattcaccttcaacgactcaaatccatagcagaatcctaaaat 24719610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 13551535 - 13551467
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||| ||||||||||||||||||| |||||||||||||| |||| ||| ||||||||    
T  13551535 aaaatccttcgattttaattgcgattttacgagtcttgattttgctattccttttcgaccagaagtaaa 13551467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 5375931 - 5376013
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||   |||  ||||||||| |||||||||||||||||    
T  5375931 aaaatccttcgattttgattgcgattttacgagtcccgattttactatttatttttgacctgaagt-aaagtcccaattttgac 5376013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 23064824 - 23064742
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| || |||||||||||||||||||||||  |||||| | ||||||||||| ||||||||| |||||||| ||||||||    
T  23064824 aaaatccttcaattttgattgcgattttacgagttccgatttcgttattccctttcgacctgaagt-aaagtcccgattttgac 23064742  T

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Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 366 - 467
Target Start/End: Complemental strand, 6347189 - 6347088
Alignment:
Q  366 ttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaaaatc 465  Q
    |||||||||| |  |||||||||||||||||| | ||||||| ||||| || ||||||||||||| ||||||||||  || || ||||||||  ||||||    
T  6347189 ttgtcaaaattccaacttaaatcctaaaatccaggattttgcaactttatttaccttcaacgactcaaatccatagccgagtctcaaaataggtaaaatc 6347090  T
Q  466 ca 467  Q
    ||    
T  6347089 ca 6347088  T

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Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 7045210 - 7045279
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| ||||||||||||||||||||| || | | ||||||||| ||||||||| |||||||||||||    
T  7045210 aaaatccttcgattttgattgcgattttatgatttttgattttgctcttccctttcgacctgaagtaaaa 7045279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 460 - 524
Target Start/End: Complemental strand, 6346818 - 6346754
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaag 524  Q
    ||||||| ||||||||||||| |||||||||| | ||||||||||| ||||||||| ||||||||    
T  6346818 aaaatccttcgattttgattgtgattttacgattttcgattttgctcttccctttcgacctgaag 6346754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 461 - 529
Target Start/End: Complemental strand, 18459493 - 18459425
Alignment:
Q  461 aaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||| |||||||| ||||||||||||||| | ||||||||||| || ||||||||||||||| ||||    
T  18459493 aaatccttcgattttaattgcgattttacgattgtcgattttgctctttcctttcaacctgaagcaaaa 18459425  T

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Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 468 - 528
Target Start/End: Original strand, 36121097 - 36121157
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||||| |||||||||||||| |||||  |||||||||||||||| |||||||||    
T  36121097 tcgattttgattccgattttacgagtcccgattaagctattccctttcaacttgaagtaaa 36121157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 362 - 465
Target Start/End: Original strand, 4156763 - 4156866
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| |||||||||| ||||||   | |||||  |||||| |||||||| ||||||| |||||  ||||||||||| ||||||  |||    
T  4156763 attgttgtcaaaatcccgacttaaatcttaaaatttaggattttatgactttattcacctttaacgactcaaatctgtagtagaatcctaaaataagcaa 4156862  T
Q  462 aatc 465  Q
    ||||    
T  4156863 aatc 4156866  T

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Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 460 - 543
Target Start/End: Complemental strand, 9911274 - 9911192
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| ||| |||| |||||||||||||||||| ||||||| |||||||||||| |  |||||| ||||||| |||||||||    
T  9911274 aaaatccttcgttttttattgcgattttacgagtcccgattttactattccctttcgatatgaagt-aaagtcctaattttgac 9911192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 470 - 549
Target Start/End: Complemental strand, 46664227 - 46664149
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgacgacatt 549  Q
    |||||||||||||||||| ||| | |||||||||||||| | |||| |||||||| |||| ||||||||||||| |||||    
T  46664227 gattttgattgcgattttccgattttcgattttgctatttcttttcgacctgaagcaaaa-tcccaattttgacaacatt 46664149  T

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Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 55476254 - 55476335
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| ||||||||||||||||||||||||||  |||||||  || |||||||| || |||||| |||||||| |||||||    
T  55476254 aaaatccttcgattttgattgcgattttacgagtaccgattttattactccctttcgacttgaagt-aaagtcccgattttga 55476335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 474 - 545
Target Start/End: Original strand, 13023838 - 13023908
Alignment:
Q  474 ttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgacga 545  Q
    ||||||| ||||||||||||  |||||||||||||| ||||| || |||||| |||||||||||||| ||||    
T  13023838 ttgattgtgattttacgagttccgattttgctattctctttcgacttgaagt-aaagtcccaattttaacga 13023908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 461 - 543
Target Start/End: Original strand, 7452772 - 7452853
Alignment:
Q  461 aaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||| |||||||||||||||||||||||| | || | ||| || ||||||||| |||||||| |||| ||| |||||||||    
T  7452772 aaatccttcgattttgattgcgattttacgattttcaacttttctcttccctttcgacctgaagcaaaa-tcctaattttgac 7452853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 542
Target Start/End: Original strand, 8409790 - 8409863
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    |||||||||||| ||||||||  | |||| ||||||||| ||||||||||| |||||| |||||||| |||||||    
T  8409790 tcgattttgattacgattttataaatctcaattttgctactccctttcaacttgaagt-aaagtcccgattttga 8409863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 460 - 529
Target Start/End: Original strand, 37240505 - 37240574
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    ||||||| |||||||||||||||||||||||| | ||||||| ||| ||| |||||  ||||||| ||||    
T  37240505 aaaatccttcgattttgattgcgattttacgattgtcgatttagctcttctctttcgtcctgaagcaaaa 37240574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 491
Target Start/End: Original strand, 4157053 - 4157084
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||||    
T  4157053 aaaatccatcgattttgattgcgattttacga 4157084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 503
Target Start/End: Original strand, 8367468 - 8367511
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttg 503  Q
    ||||||| |||||||||||||| |||||||||||| ||||||||    
T  8367468 aaaatccttcgattttgattgcaattttacgagtcccgattttg 8367511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 543
Target Start/End: Original strand, 10394884 - 10394958
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    |||||||||||||||||||||||| | | ||||||||| || | ||||||| ||||| |||| | |||||||||||    
T  10394884 tcgattttgattgcgattttacgatttttgattttgctctttcttttcaacttgaagcaaaa-ttccaattttgac 10394958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Original strand, 36121024 - 36121053
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  36121024 aaaatccatcgattttgattgcgattttac 36121053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 93833 - 93706
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||  | |||||||||| ||||| ||| |||||||||| ||||| | ||||||| | |    
T  93833 attgttgtcaaaatcccgacttaaatcctaaaatccagaattttg--attttcttcaccctcaacaactcaaatccatagaagaattctaaaataggcga 93736  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||    
T  93735 aatccatcgattttgattgcgattttacga 93706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 491
Target Start/End: Complemental strand, 93633 - 93602
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacga 491  Q
    ||||||||||||||||||||||||||||||||    
T  93633 aaaatccatcgattttgattgcgattttacga 93602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 70; Significance: 4e-31; HSPs: 2)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 362 - 491
Target Start/End: Complemental strand, 7584 - 7455
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||| | ||||| ||||||||| ||||||| | | |||||||||||||||| |||||||||||   |||||||||||||||||| ||||||| |||    
T  7584 attgttgttagaatcccgacttaaattctaaaattcaggattttgcgactttctttaccttcaacgaacaaaatccatagtagaatcctaaaataggcaa 7485  T
Q  462 aatccatcgattttgattgcgattttacga 491  Q
    ||| |||||||||| |||||||||||||||    
T  7484 aattcatcgattttaattgcgattttacga 7455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 460 - 510
Target Start/End: Complemental strand, 7318 - 7268
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattcc 510  Q
    ||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  7318 aaaatccttcgattttgattacgattttacaagtctcgattttgctattcc 7268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 374 - 489
Target Start/End: Complemental strand, 218 - 102
Alignment:
Q  374 atcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagac-aaaatccatcgat 472  Q
    |||| ||||||||||||||||| | | ||||||||||||||||||| |||||||||| |||||||||||| ||| | ||||||| | |||||||||||||    
T  218 atcccgacttaaatcctaaaatgcaggattttgcgactttcttcacgttcaacgactcaaatccatagtaaaattctaaaataggcgaaaatccatcgat 119  T
Q  473 tttgattgcgattttac 489  Q
    |||||||| ||||||||    
T  118 tttgattgagattttac 102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 362 - 454
Target Start/End: Complemental strand, 48917 - 48825
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaa 454  Q
    |||||||| ||||| | ||||||||||||||||||  ||||||||| ||||| |||||||||||||||| |||||||||  ||||||||||||    
T  48917 attgttgtgaaaattccgacttaaatcctaaaatctagaattttgcaactttattcaccttcaacgactcaaatccatatgagaatcccaaaa 48825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 49; Significance: 1e-18; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 56288 - 56220
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| |||||||||||||||||||||   |||||||||||||||||||||||| ||||||||||||    
T  56288 aaaatccttcgattttgattgcgattttagatgtctcgattttgctattccctttcgacctgaagtaaa 56220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 56353 - 56324
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  56353 aaaatccatcgattttgattgcgattttac 56324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 460 - 528
Target Start/End: Complemental strand, 14789 - 14721
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||||| ||| |||| || |||||||||    
T  14789 aaaatccttcgattttgattgcgattttacgagtcccgattttgctactccatttcgacttgaagtaaa 14721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Complemental strand, 14859 - 14820
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  14859 tcgattttgattgcgattttacgagtcccgactttgctat 14820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 41; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 362 - 466
Target Start/End: Complemental strand, 37295 - 37191
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    |||||||||||||| | |||||||||  |||||| | ||||||||| | ||| |||||||||||| ||| |||||||||| ||||||  |||||||  ||    
T  37295 attgttgtcaaaatgccgacttaaattttaaaattcagaattttgcaattttattcaccttcaacaactcaaatccatagcagaatcttaaaataggtaa 37196  T
Q  462 aatcc 466  Q
    |||||    
T  37195 aatcc 37191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 362 - 462
Target Start/End: Complemental strand, 9149 - 9049
Alignment:
Q  362 attgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaatcccaaaatagacaa 461  Q
    ||||||||||||||||||| ||||||  ||||||   | |||||| || ||| |||||||||||||||| |||||||||| | |||||  |||||| |||    
T  9149 attgttgtcaaaatcctgatttaaattttaaaatgtaggattttgtgattttattcaccttcaacgactcaaatccatagcaaaatccttaaataggcaa 9050  T
Q  462 a 462  Q
    |    
T  9049 a 9049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 542
Target Start/End: Complemental strand, 8822 - 8741
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| |||||||||||| |||||||| || | ||||||||||| | || ||||||||| ||| |||| |||| |||||||    
T  8822 aaaatccttcgattttgattacgattttatgattttcgattttgctctaccttttcaacctaaagcaaaa-tcccgattttga 8741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 460 - 489
Target Start/End: Complemental strand, 8887 - 8858
Alignment:
Q  460 aaaatccatcgattttgattgcgattttac 489  Q
    ||||||||||||||||||||||||||||||    
T  8887 aaaatccatcgattttgattgcgattttac 8858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 475 - 543
Target Start/End: Complemental strand, 38375 - 38308
Alignment:
Q  475 tgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||| ||||||||||||| |||||| || |||||| |||||||| ||||||||    
T  38375 tgattgcaattttacgagtcccgattttgctatttcctttcgacttgaagt-aaagtcccgattttgac 38308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 460 - 542
Target Start/End: Original strand, 94 - 175
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttga 542  Q
    ||||||| |||||||| ||| | |||||||||||| ||||||||||| |||||||  || |||||| |||||||| |||||||    
T  94 aaaatccttcgattttaattacaattttacgagtcccgattttgctactcccttttgacttgaagt-aaagtcccgattttga 175  T

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Target: scaffold0182 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 470 - 528
Target Start/End: Original strand, 24662 - 24720
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaa 528  Q
    |||||||||| | |||||||||||| ||||||||||| |||||||| || |||||||||    
T  24662 gattttgattacaattttacgagtcccgattttgctactccctttcgacttgaagtaaa 24720  T

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Target: scaffold0182; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 24582 - 24621
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||| ||||||||| ||||||||    
T  24582 tcgattttgattgcgattttatgagtctcgactttgctat 24621  T

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Target: scaffold0115 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 361 - 447
Target Start/End: Complemental strand, 35189 - 35103
Alignment:
Q  361 tattgttgtcaaaatcctgacttaaatcctaaaatcctgaattttgcgactttcttcaccttcaacgacttaaatccatagtagaat 447  Q
    ||||||||||||||||  ||||||||| ||||||| |  |||||||  ||||| |||||||| ||||||| |||| ||| |||||||    
T  35189 tattgttgtcaaaatctcgacttaaattctaaaattcataattttggaactttattcacctttaacgactcaaattcattgtagaat 35103  T

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Target: scaffold0526 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 468 - 507
Target Start/End: Original strand, 8352 - 8391
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  8352 tcgattttgattgcgattttacgagtcccgactttgctat 8391  T

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Target: scaffold0028 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 460 - 543
Target Start/End: Original strand, 145854 - 145936
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaagtcccaattttgac 543  Q
    ||||||| |||||||||||||| ||||||||| | |||||||  |||||  ||||| |||||||| |||| || ||||||||||    
T  145854 aaaatccttcgattttgattgctattttacgattttcgatttaactattttctttcgacctgaagcaaaa-tctcaattttgac 145936  T

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Target: scaffold0027 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 460 - 494
Target Start/End: Complemental strand, 132978 - 132944
Alignment:
Q  460 aaaatccatcgattttgattgcgattttacgagtc 494  Q
    ||||||| |||||||||||||||||||||||||||    
T  132978 aaaatccttcgattttgattgcgattttacgagtc 132944  T

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Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 470 - 507
Target Start/End: Complemental strand, 133046 - 133009
Alignment:
Q  470 gattttgattgcgattttacgagtctcgattttgctat 507  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  133046 gattttgattgcgattttacgagtcccgactttgctat 133009  T

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Target: scaffold0534 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 529
Target Start/End: Original strand, 944 - 1005
Alignment:
Q  468 tcgattttgattgcgattttacgagtctcgattttgctattccctttcaacctgaagtaaaa 529  Q
    |||||||||||||| ||||||||| | || |||||||| ||||||||  |||||||| ||||    
T  944 tcgattttgattgcaattttacgattttcaattttgctcttcccttttgacctgaagcaaaa 1005  T

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