View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4846_high_4 (Length: 322)
Name: NF4846_high_4
Description: NF4846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4846_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 240; Significance: 1e-133; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 40207511 - 40207795
Alignment:
| Q |
1 |
taaaaagttaagagtgaaaaacagacgaacaatctctggttgaaactgattacactgacgttcaatgaaaatacactaacattatgcaacaattttttct |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
40207511 |
taaaaagttaagagtgaaaaacaaacgaacaatctctggttgaaaccggttacactgacgttcaatgaaaatacactaacactatgcaacaattttttct |
40207610 |
T |
|
| Q |
101 |
aaattgtacatattttttggccaattttaaattatagttataaatacgaacaatatcatgagtttttattgaatgtcgaaattaatagtaaatctcgatt |
200 |
Q |
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| T |
40207611 |
aaattgtacatatattttggccaattttaaattgtagttataaatacgaacaatatcatgagttttcattgaatgtcgaaattaatagtaaatctcgatt |
40207710 |
T |
|
| Q |
201 |
aaactcaactaaagaatccatgtaaaaacacaaccatggaaagggaaacttaaaattccaccacatgtaattaaacaaaaaattgtt |
287 |
Q |
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|||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
40207711 |
aaactcaactaaagaatctatgt--aaacacaaccatggaaagggaaacttaaaattccaccacatgttattaaacaaaaaattgtt |
40207795 |
T |
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