View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4846_low_13 (Length: 251)
Name: NF4846_low_13
Description: NF4846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4846_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 5257261 - 5257495
Alignment:
| Q |
1 |
aaagggaagtaaaataaaaagactaatgttttattacatttatgattagaaaaaggagaaagagaagacagtgagtgaacatccacaaagatgcctagaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5257261 |
aaagggaagtaaaataaaaagactaatgttttattacatttatgtttagacaaaggagaaagagaagacagtgagtgaacatccacaaagatgcctagaa |
5257360 |
T |
|
| Q |
101 |
accataggcatagggcaatgttcatccaccctcaacttaatttgtcagccagaggtgctaccaccaccgcaaagactggttccttctctaaatctcaggt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
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| T |
5257361 |
accataggcatagggcaatgttcatccaccctcaacttaatttgtcagccagaggtgctaccaccaccacaaagactggttccttctctaaatctcaggt |
5257460 |
T |
|
| Q |
201 |
atttcttttcccttctaagcataatgtagatccta |
235 |
Q |
| |
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||||||||||||||||||||||||||||||||||| |
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| T |
5257461 |
atttcttttcccttctaagcataatgtagatccta |
5257495 |
T |
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