View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4848_high_6 (Length: 275)
Name: NF4848_high_6
Description: NF4848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4848_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 263
Target Start/End: Complemental strand, 1832102 - 1831840
Alignment:
| Q |
1 |
tattatgactaggaatcaaaccctaactaatgttatcgctgattagaataaaacaattgcaataaaaatcatataataagttaaaattgaatcatgcatc |
100 |
Q |
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| T |
1832102 |
tattatgtctaggaatcaaaccctaactaatgttatcgctgattagaataaaacaattgcaataaaaatcatataataagttaaaattgaatcatgcatc |
1832003 |
T |
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| Q |
101 |
atgatcatgaagcataccataccagccatgatgcttcattatgaagaactggtggtatatccaaatgttcaggcttcaaaaatgtttgcagcaagcttat |
200 |
Q |
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| T |
1832002 |
atgatcatgaagcataccataccagccatgatgcttcattatgaagaactggtggtatatccaaatgttcaggcttcaaaaatgtttgcagcaagcttat |
1831903 |
T |
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| Q |
201 |
tttctcagagatttcatggtcaatctttgcatcctcaggagaagcagcaaatgtccgagagaa |
263 |
Q |
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| T |
1831902 |
tttctcagagatttcatggtcaatctttgcatcctcaggagaagcagcaaatgttcgagagaa |
1831840 |
T |
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