View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4848_low_13 (Length: 228)
Name: NF4848_low_13
Description: NF4848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4848_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 5232295 - 5232092
Alignment:
| Q |
1 |
gcctttcaagctgctcaagatccttagaacttagtggacccaaatcttcacctaaaagatttctgaaatattggagacacatacatacacacacaattaa |
100 |
Q |
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| T |
5232295 |
gcctttcaagctgctcaagatccttagaacttagtggacccaaatcttcacctaaaagatttctgaaatattggagacaca----tacacacacaattaa |
5232200 |
T |
|
| Q |
101 |
tagtgtcgatatattggcaaatatttcactatagaaaatatgaaaatttaatgtaaaattctttacctctgtgctctttgaagattttcaaatctttgtt |
200 |
Q |
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| T |
5232199 |
tagtgtcgatatattggcaaatatttcactataaaaaatatgaaaa-ttaatgtaaaaatctttacctctgtgctctttgaagattttcaaatctttgtt |
5232101 |
T |
|
| Q |
201 |
tcagcttca |
209 |
Q |
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||||||||| |
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| T |
5232100 |
tcagcttca |
5232092 |
T |
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