View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4848_low_8 (Length: 266)
Name: NF4848_low_8
Description: NF4848
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4848_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 48961981 - 48961708
Alignment:
| Q |
1 |
taaacaaataaggagtatgaaccatatatcacaaaccatcatcccattcttaatagacacaagattcatgatctctatctatctttcatagaaaac--ta |
98 |
Q |
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| T |
48961981 |
taaacaaataaggagtatgaaccatatatcacaaaccatcatcccattcttaatagacacaagattcatgatctctatctatctttcatagaaaacacta |
48961882 |
T |
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| Q |
99 |
aggtagcatctggttggagttaaagtc--------------atgcatccat--atgcatgc--------atttattttccactaatgatgaagtggagag |
174 |
Q |
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| T |
48961881 |
aggtagcacctggttggagttaaagtcatgcatccatatgcatgcatgcatgcatgcatgcgtccatacatttattttccactaatga---agtggagag |
48961785 |
T |
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| Q |
175 |
aatcttcaacctttattccccatatacctttataagccagaaacaaacagaaagaaccaactacaatcaattcaaac |
251 |
Q |
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| T |
48961784 |
aatcttcaacctttattccccatatacctttataagccagaaacaaacagaaagaaccaactacaatcaattcaaac |
48961708 |
T |
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