View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4850-Insertion-8 (Length: 246)
Name: NF4850-Insertion-8
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4850-Insertion-8 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 8 - 185
Target Start/End: Complemental strand, 28743956 - 28743778
Alignment:
| Q |
8 |
gcacatagattccacatgagttgcatcaaagactggctcctagctgtaaagaatgtatgcccactttgcaataaaaggggttatcatttcaattaatgat |
107 |
Q |
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| T |
28743956 |
gcacatagattccacatgagttgcatcaaagactggctcctagctgtaaagaatgtatgcccactttgcaataaaaggggatatcatttcaattaatgat |
28743857 |
T |
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| Q |
108 |
g-aaaatggaggctgaaggaagaaatttttgattcatggctaatatgtccttgaaaatggggataatttctttgctaaa |
185 |
Q |
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| T |
28743856 |
gaaaaatggaggctgaaggaagaaatttttgattcatggctaatatgtccttgaaaatggggataatttctttgctaaa |
28743778 |
T |
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