View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4850_high_50 (Length: 254)
Name: NF4850_high_50
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4850_high_50 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 17 - 244
Target Start/End: Original strand, 7148359 - 7148586
Alignment:
| Q |
17 |
tttagcacactcaaactaggagttgaacactcttccttttcataatcaggtggaagcacttccctataagtttccttctccaaatccaaagaaacaatag |
116 |
Q |
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| T |
7148359 |
tttagcacactcaaactaggagttgaacactcttccttttcataatcaggtggaagcacttccctataagtttccttctccaaatccaaagaaacaatag |
7148458 |
T |
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| Q |
117 |
tccaaaatgaacttgaaccaattgagtaattagaagcccaattgagtgtaccactaacaaatttcccagatgaattttggtaaggtgaaacaccatgagg |
216 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7148459 |
tccaaaaagaacttgaaccaattgagtaattagaagcccaattgagtgtaccactaacaaatttcccagatgaattttggtaaggtgaaacaccatgagg |
7148558 |
T |
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| Q |
217 |
aaaatcatgaatcttcctccaagtatta |
244 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
7148559 |
aaaatcatgaatcttcctccaagtatta |
7148586 |
T |
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