View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4850_high_55 (Length: 245)
Name: NF4850_high_55
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4850_high_55 |
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Alignment Details
Target: chr1 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 9 - 243
Target Start/End: Original strand, 48922292 - 48922526
Alignment:
| Q |
9 |
attattctaaacaagttggaggccggtccaataaattatatttgtagatgaggcataaagnnnnnnntgttttgatattcacactatataacacttcgaa |
108 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
48922292 |
attattctaaacaagttggaggccggtccaataaattatatttgtagatgaggcataaagaaaaaaatgttttgatattcacactatataacacttcgaa |
48922391 |
T |
|
| Q |
109 |
tcgcaatgatcaattaagtgtgaggtcattatgaagcttccctctcatgttaattcaaaattatatccgaatttgaaattgcctgtagttaggagcaagt |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48922392 |
tcgcaatgatcaattaagtgtgaggtcattatgaagcttccctctcatgttaattcaaaattatatccgaatttgaaattgcctgtagttaggagcaagt |
48922491 |
T |
|
| Q |
209 |
cgtcccgaagaagcagtgagatgaattcgatcctt |
243 |
Q |
| |
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|||||||||||||||||||| |||||||||||||| |
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| T |
48922492 |
cgtcccgaagaagcagtgaggtgaattcgatcctt |
48922526 |
T |
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