View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4850_high_60 (Length: 234)
Name: NF4850_high_60
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4850_high_60 |
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Alignment Details
Target: chr7 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 222
Target Start/End: Original strand, 23915353 - 23915557
Alignment:
| Q |
18 |
taaactatacacacatacatgtatttttaattatattaacaacattattacataccaatacgaataacaaagtatagattatgatgatgaacaataacgt |
117 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23915353 |
taaactatacacacatacatgtatttttaattatattaacaacattattacataccaatacgaataacaaagtatagattatgatgatgaacaataacgt |
23915452 |
T |
|
| Q |
118 |
gggaagaattatgattcatcaccacacacagtgctaccaccattgataatttccacttcctctttagtctttactttgcttccaaccttaactttcttca |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23915453 |
gggaagaattatgattcatcaccacacacagtgctaccaccattgataatttccacttcctctttagtctttactttgcttccaaccttaactttcttca |
23915552 |
T |
|
| Q |
218 |
ttctt |
222 |
Q |
| |
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||||| |
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| T |
23915553 |
ttctt |
23915557 |
T |
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