View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4850_low_34 (Length: 298)

Name: NF4850_low_34
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4850_low_34
NF4850_low_34
[»] chr4 (21 HSPs)
chr4 (19-217)||(21586408-21586606)
chr4 (221-298)||(11511485-11511562)
chr4 (219-298)||(480470-480549)
chr4 (219-298)||(48183072-48183151)
chr4 (219-298)||(50052451-50052530)
chr4 (221-298)||(6034044-6034121)
chr4 (220-298)||(29234268-29234346)
chr4 (221-298)||(41236347-41236424)
chr4 (219-298)||(23608233-23608312)
chr4 (219-298)||(24995130-24995209)
chr4 (219-298)||(29239884-29239963)
chr4 (219-298)||(42044390-42044469)
chr4 (221-298)||(3481654-3481731)
chr4 (221-298)||(50526194-50526271)
chr4 (221-298)||(54473556-54473633)
chr4 (221-288)||(40574779-40574846)
chr4 (219-286)||(55475189-55475256)
chr4 (220-286)||(50813927-50813993)
chr4 (219-286)||(19670751-19670818)
chr4 (219-294)||(29977883-29977958)
chr4 (221-287)||(31910192-31910258)
[»] chr3 (26 HSPs)
chr3 (219-298)||(49607412-49607491)
chr3 (219-297)||(11095377-11095455)
chr3 (221-298)||(53982011-53982088)
chr3 (219-294)||(27714918-27714993)
chr3 (221-298)||(33644200-33644277)
chr3 (226-298)||(52629305-52629377)
chr3 (219-298)||(54868918-54868997)
chr3 (219-298)||(33118874-33118953)
chr3 (220-298)||(17470404-17470482)
chr3 (221-298)||(8076393-8076470)
chr3 (225-294)||(30801760-30801829)
chr3 (225-298)||(48587114-48587187)
chr3 (222-294)||(31456690-31456762)
chr3 (219-298)||(36707447-36707526)
chr3 (221-295)||(26141558-26141632)
chr3 (221-286)||(14623874-14623939)
chr3 (222-289)||(13898087-13898154)
chr3 (220-298)||(24699977-24700055)
chr3 (220-294)||(35536625-35536699)
chr3 (219-289)||(35965806-35965876)
chr3 (220-289)||(8956761-8956830)
chr3 (233-289)||(20764947-20765003)
chr3 (220-298)||(9562998-9563076)
chr3 (219-289)||(11347954-11348024)
chr3 (233-295)||(26754707-26754769)
chr3 (221-286)||(45058588-45058652)
[»] chr1 (22 HSPs)
chr1 (219-298)||(2581913-2581992)
chr1 (221-298)||(9474899-9474976)
chr1 (221-298)||(47452343-47452420)
chr1 (221-298)||(3000319-3000396)
chr1 (219-298)||(38595152-38595231)
chr1 (220-298)||(50630457-50630535)
chr1 (220-298)||(51898706-51898784)
chr1 (221-298)||(48716305-48716382)
chr1 (219-298)||(8346411-8346490)
chr1 (219-298)||(38632344-38632423)
chr1 (224-298)||(44548399-44548473)
chr1 (221-298)||(27564758-27564835)
chr1 (219-289)||(23597123-23597193)
chr1 (221-298)||(37649198-37649275)
chr1 (219-295)||(32813245-32813321)
chr1 (219-298)||(26274430-26274509)
chr1 (220-295)||(41758804-41758879)
chr1 (221-298)||(43132-43209)
chr1 (221-286)||(50591035-50591100)
chr1 (222-294)||(11152405-11152476)
chr1 (219-291)||(49811557-49811629)
chr1 (252-298)||(13414792-13414838)
[»] chr7 (26 HSPs)
chr7 (220-298)||(36362025-36362103)
chr7 (221-298)||(35137533-35137610)
chr7 (218-298)||(8080406-8080486)
chr7 (219-298)||(7389387-7389466)
chr7 (219-298)||(40957705-40957784)
chr7 (220-298)||(36361936-36362014)
chr7 (220-298)||(3434561-3434639)
chr7 (221-298)||(38267040-38267117)
chr7 (218-298)||(19436210-19436290)
chr7 (219-298)||(38837215-38837294)
chr7 (224-298)||(3783998-3784072)
chr7 (221-298)||(4999537-4999614)
chr7 (221-298)||(19329842-19329919)
chr7 (219-287)||(10343597-10343665)
chr7 (219-298)||(36208171-36208250)
chr7 (224-294)||(3694370-3694440)
chr7 (221-294)||(8238212-8238286)
chr7 (220-286)||(22343360-22343426)
chr7 (219-291)||(38044195-38044267)
chr7 (221-289)||(39255955-39256023)
chr7 (221-289)||(46374834-46374902)
chr7 (219-270)||(11044186-11044237)
chr7 (220-295)||(46033827-46033902)
chr7 (220-286)||(41915740-41915806)
chr7 (220-289)||(26296643-26296712)
chr7 (222-298)||(32951516-32951592)
[»] chr8 (22 HSPs)
chr8 (221-294)||(1179967-1180040)
chr8 (221-298)||(34012319-34012396)
chr8 (220-298)||(44507110-44507188)
chr8 (221-298)||(504144-504221)
chr8 (221-298)||(12831047-12831124)
chr8 (221-298)||(15197333-15197410)
chr8 (219-298)||(14547920-14547999)
chr8 (220-298)||(37038478-37038556)
chr8 (221-298)||(23122620-23122697)
chr8 (222-298)||(5957831-5957907)
chr8 (226-291)||(10621117-10621182)
chr8 (221-294)||(40423970-40424043)
chr8 (219-298)||(10284654-10284733)
chr8 (221-289)||(20074966-20075034)
chr8 (219-286)||(16383375-16383442)
chr8 (219-286)||(34307214-34307281)
chr8 (240-298)||(8841455-8841513)
chr8 (221-291)||(15048212-15048281)
chr8 (219-284)||(4854900-4854965)
chr8 (221-286)||(30479509-30479574)
chr8 (219-284)||(24307627-24307692)
chr8 (219-284)||(24307830-24307895)
[»] chr5 (20 HSPs)
chr5 (221-298)||(33149661-33149738)
chr5 (219-298)||(18520907-18520986)
chr5 (220-298)||(2740273-2740351)
chr5 (221-298)||(14831814-14831891)
chr5 (219-298)||(36732965-36733044)
chr5 (221-298)||(35785199-35785276)
chr5 (221-298)||(40145407-40145484)
chr5 (219-298)||(13811650-13811729)
chr5 (221-294)||(42414329-42414402)
chr5 (221-295)||(28177775-28177849)
chr5 (221-298)||(35943915-35943992)
chr5 (222-280)||(36875644-36875702)
chr5 (219-286)||(3921300-3921367)
chr5 (220-295)||(6679697-6679772)
chr5 (219-291)||(15409640-15409712)
chr5 (221-289)||(26720516-26720584)
chr5 (221-289)||(26990265-26990333)
chr5 (220-286)||(2252203-2252269)
chr5 (220-298)||(41470439-41470517)
chr5 (221-289)||(33825356-33825424)
[»] chr2 (25 HSPs)
chr2 (219-294)||(9058478-9058553)
chr2 (219-298)||(30915461-30915540)
chr2 (219-298)||(33436123-33436202)
chr2 (220-298)||(5574511-5574589)
chr2 (220-298)||(7465758-7465836)
chr2 (224-298)||(28863458-28863532)
chr2 (221-298)||(17473020-17473097)
chr2 (219-298)||(10249405-10249484)
chr2 (219-298)||(38882837-38882915)
chr2 (220-298)||(32505671-32505749)
chr2 (221-298)||(13438343-13438420)
chr2 (221-298)||(40701478-40701555)
chr2 (224-294)||(19930847-19930917)
chr2 (221-295)||(28381681-28381755)
chr2 (221-298)||(27864704-27864781)
chr2 (219-298)||(20700813-20700892)
chr2 (221-298)||(4060685-4060762)
chr2 (221-289)||(40613934-40614002)
chr2 (220-289)||(33436210-33436279)
chr2 (219-298)||(26891527-26891606)
chr2 (219-291)||(38273172-38273244)
chr2 (219-289)||(42257191-42257261)
chr2 (237-286)||(13365369-13365418)
chr2 (221-286)||(43490121-43490186)
chr2 (243-291)||(41758607-41758655)
[»] chr6 (17 HSPs)
chr6 (221-298)||(32869678-32869755)
chr6 (221-297)||(31109424-31109500)
chr6 (224-298)||(22880681-22880755)
chr6 (220-298)||(11427615-11427695)
chr6 (221-298)||(17598554-17598631)
chr6 (219-298)||(6209488-6209567)
chr6 (219-298)||(23128150-23128229)
chr6 (220-295)||(31976247-31976322)
chr6 (219-298)||(15832575-15832654)
chr6 (221-298)||(29857827-29857904)
chr6 (221-286)||(31953065-31953130)
chr6 (222-297)||(946377-946452)
chr6 (219-286)||(15990077-15990144)
chr6 (219-286)||(30341395-30341462)
chr6 (221-286)||(15508059-15508124)
chr6 (219-290)||(31110792-31110861)
chr6 (219-289)||(12732480-12732550)
[»] scaffold0321 (1 HSPs)
scaffold0321 (219-298)||(10132-10211)
[»] scaffold1268 (1 HSPs)
scaffold1268 (221-298)||(952-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (221-298)||(952-1029)
[»] scaffold0237 (1 HSPs)
scaffold0237 (221-298)||(4029-4106)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 19 - 217
Target Start/End: Complemental strand, 21586606 - 21586408
Alignment:
Q  19 catctggactccattggtgaacttgatcaatgaaatgaagggcttgtgaaagaatataccatacatatcataatttccacaaaataaataaagttatgtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21586606 catctggactccattggtgaacttgatcaatgaaatgaagggcttgtgaaagaatataccatacatatcataatttccacaaaatgaataaagttatgtt 21586507  T
Q  119 gggtcaaagagtggctatttagcataatttccactcatggtctttggaccacatatagcataatttaaaccgatagtcaaatgaatgagtacctttggc 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21586506 gggtcaaagagtggctatttagcataatttccactcatggtctttggaccacatatagcataatttaaaccgatagtcaaatgaatgagtacctttggc 21586408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 11511562 - 11511485
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  11511562 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtg 11511485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 480549 - 480470
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||  |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  480549 aagagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 480470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 48183151 - 48183072
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||||||||||||| |||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  48183151 aagagtaatgatacatagacacccttacgtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 48183072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 50052530 - 50052451
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  50052530 aagagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 50052451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 6034044 - 6034121
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||||||||| |||||||||||    
T  6034044 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtcacgtg 6034121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 29234346 - 29234268
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||||||||| ||| |||| |||||||||||||  || ||||||||||||||||||||||||    
T  29234346 agagtaatgatacatagacacccttagatggcaatacaccctttgataccttcacaaaaatctgacacgtagtcacgtg 29234268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 41236347 - 41236424
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||| | ||||| ||||||||||||||||||||||||    
T  41236347 gagtaatgatacatagacacccttaggtggcaatacaccttttgacatccacacaaaaatctgacacgtagtcacgtg 41236424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 23608233 - 23608312
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||| ||  |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  23608233 aagagtaatgatatatagacacccttagatgacaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtg 23608312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 24995209 - 24995130
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| || ||||||||||| ||| |||| ||||||||| ||||||| |||||| |||||||||||||||||    
T  24995209 aagagtaatgatatatggacacccttagatggcaatacaccctttgacacccacataaaaatttgacacgtagtcacgtg 24995130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 29239884 - 29239963
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||| ||||| | ||||| |||||||| |||||||||||||||    
T  29239884 aagagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctaacacgtagtcacgtg 29239963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 42044469 - 42044390
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| | ||||  | ||||||| ||||||||||||||||||||||||    
T  42044469 aagagtaatgatacatagacacccttaggtggcaatacatccttgtacacccacacaaaaatctgacacgtagtcacgtg 42044390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 3481654 - 3481731
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||| |||||||| |||| || |||||| ||||||| ||||||||||||| ||||||||||    
T  3481654 gagtaatgatacatagacacctttaggtggcaatacactctttgacacccacacaaaaatctgacacatagtcacgtg 3481731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 50526271 - 50526194
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| | |||||||| |||| ||||||||| ||||||| ||||||||||||||| ||||||||    
T  50526271 gagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcacgtg 50526194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 54473633 - 54473556
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||  |||| ||| ||||| ||||||| |||||||| |||||||||||||||    
T  54473633 gagtaatgatacatagacacccttaggtgacaatacaccatttgacacccacacaaaaatctaacacgtagtcacgtg 54473556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 221 - 288
Target Start/End: Original strand, 40574779 - 40574846
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacg 288  Q
    |||| |||||| ||||||| ||||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  40574779 gagttatgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacg 40574846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 55475189 - 55475256
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| ||| |||||||||| |||| ||||||||| ||||||| ||||||||||||    
T  55475189 aagagttatgatacataaacatccttaggtggcaatacaccctttgacacccacacaaaaatctgaca 55475256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 50813993 - 50813927
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||| |||||| ||| |||| |||||||||||||| |||| |||| ||||||| ||||||||||||    
T  50813993 agagttatgatacataaacactcttaggtggtaatacaccccttgacacccacacaaaaatctgaca 50813927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 19670818 - 19670751
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| || |||| ||||||||||||    
T  19670818 aagagttatgatacataaacacccttaggtggcaatacaccccttgacactcacacaaaaatctgaca 19670751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 29977883 - 29977958
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||||| ||| | | || ||||||| |||| |||| || | ||||||| ||||||||||||||||||||    
T  29977883 aagagtaatgatacatacagaaccataggtggcaatacaccccttaacacccacacaaaaatctgacacgtagtca 29977958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 31910192 - 31910258
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacac 287  Q
    |||| |||||| ||||||| |||||||||  |||| || |||||| ||||||| |||||||||||||    
T  31910192 gagttatgatacatagacatccttaggtgacaatacactctttgacacccacacaaaaatctgacac 31910258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 60; Significance: 1e-25; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 49607412 - 49607491
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  49607412 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 49607491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 219 - 297
Target Start/End: Complemental strand, 11095455 - 11095377
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgt 297  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||||||||||||||||||||    
T  11095455 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgt 11095377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 53982011 - 53982088
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  53982011 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 53982088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Complemental strand, 27714993 - 27714918
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  27714993 aagagtaatgatacatagacacctttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtca 27714918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 33644200 - 33644277
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||| ||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  33644200 gagtaatgatacatagacacccttgggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 33644277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 226 - 298
Target Start/End: Original strand, 52629305 - 52629377
Alignment:
Q  226 atgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  52629305 atgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 52629377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 54868997 - 54868918
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||    
T  54868997 aagagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtg 54868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 33118953 - 33118874
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||| |||||||||||||||||  |||| ||||||||| ||||||| |||||| |||||||||||||||||    
T  33118953 aagagttatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtg 33118874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 17470404 - 17470482
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||||| |||||||| |||| ||| ||| | ||||||| ||||||||||||||||||||||||    
T  17470404 agagtaatgatacatagacacctttaggtggcaatacaccttttaacacccacacaaaaatctgacacgtagtcacgtg 17470482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 8076393 - 8076470
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||| |||||||||||||| | || ||||||||| ||||||| |||||||| |||||||||||||||    
T  8076393 gagtaatgatacataaacacccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 8076470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 294
Target Start/End: Complemental strand, 30801829 - 30801760
Alignment:
Q  225 aatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||| |||||| ||||| |||||||    
T  30801829 aatgatacatagacacccttaggtgataatacaccctttgatacccacacaaaaatatgacatgtagtca 30801760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 225 - 298
Target Start/End: Complemental strand, 48587187 - 48587114
Alignment:
Q  225 aatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||| ||||| |||||||||||| |||| ||||||||| ||| ||| ||||||||||||||||||||||||    
T  48587187 aatgatacatagatacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtg 48587114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 294
Target Start/End: Original strand, 31456690 - 31456762
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||||||||| |||||||||| |||| || |||| ||||||||| ||||||| ||||||||||||||||||||    
T  31456690 agtaatgatacatagacacccataggcggcaatacaccctttgacacccacacaaaaatctgacacgtagtca 31456762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 36707526 - 36707447
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||||| |||||||||||  |||| ||||||||| | ||||| |||||||||||||||||| |||||    
T  36707526 aagagtaatgatacatagatacccttaggtgacaatacaccctttgacatccacacaaaaatctgacacgtagttacgtg 36707447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 26141632 - 26141558
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||| | ||||||| ||||||||||||||| |||||    
T  26141632 gagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcac 26141558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 14623939 - 14623874
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||||||||| ||||||| |||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  14623939 gagtaatgatacatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 14623874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 289
Target Start/End: Complemental strand, 13898154 - 13898087
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||||||||| ||| ||| |||||||||| |||| |||| |||| ||||||| |||||||||||||||    
T  13898154 agtaatgatagataaacatccttaggtggcaatacaccccttgacacccacataaaaatctgacacgt 13898087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 24700055 - 24699977
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||| |||||| ||| |||| ||| ||||| ||||||| ||||||||| ||||| | ||||||    
T  24700055 agagtaatgatacatagacatccttagttggcaatacaccttttgacacccacataaaaatctggcacgtggccacgtg 24699977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 35536625 - 35536699
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||||||||||| ||||||| ||||| |||| |||| ||| ||||| ||||||| |||||| |||||||| ||||    
T  35536625 agagtaatgatacatagacatccttatgtggcaatacaccatttgacacccacataaaaatgtgacacgtggtca 35536699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 35965876 - 35965806
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||||||||| ||| ||| ||||| ||| ||||| | ||||||| ||||||| |||||||||||||||    
T  35965876 aagagtaatgatacatatacatccttaagtgataatacatcctttgacacccacataaaaatctgacacgt 35965806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 8956761 - 8956830
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||||||||||| ||||||| ||||| |||| |||| | ||||||| ||||||| |||||| ||||||||    
T  8956761 agagtaatgatacatagacatccttatgtggcaatacatcctttgacacccacataaaaatgtgacacgt 8956830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 289
Target Start/End: Complemental strand, 20765003 - 20764947
Alignment:
Q  233 atagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||| ||||||||||||||| || |||| | ||||||| |||||||||||||||    
T  20765003 atagacatccttaggtggtaatacactctttaacacccacacaaaaatctgacacgt 20764947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 9562998 - 9563076
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||| ||||| |||| ||  |||| | ||||||| | ||| | ||||||||||||||||||||||||    
T  9562998 agagtaatgatacataaacaccattagatgacaatacaacctttgacatccatataaaaatctgacacgtagtcacgtg 9563076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 11348024 - 11347954
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||||| |||||| ||||||| |||||||||  |||| | ||||||| | ||||| |||||||||||||||    
T  11348024 aagagttatgatacatagacatccttaggtgacaatacatcctttgacatccacacaaaaatctgacacgt 11347954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 26754707 - 26754769
Alignment:
Q  233 atagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    |||||||||||||||||| |||| |||||| || | ||||| |||||||||||| || |||||    
T  26754707 atagacacccttaggtggcaatacacccttggacatccacacaaaaatctgacatgtggtcac 26754769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 45058652 - 45058588
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  45058652 gagttatgatacataaacacccttaggtggcaatacaccc-ttgacacccacataaaaatctgaca 45058588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 1e-25; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 2581913 - 2581992
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  2581913 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 2581992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 9474976 - 9474899
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  9474976 gagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 9474899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 47452420 - 47452343
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  47452420 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 47452343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 3000319 - 3000396
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||| |||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  3000319 gagtaatgatacataaacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 3000396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 38595152 - 38595231
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||| ||||| |||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  38595152 aagagtaatgatacataaacacctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 38595231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 50630457 - 50630535
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||| |||||||||||| |||| | |||||| |||||||| ||||||||||||||||||||||||    
T  50630457 agagtaatgatacatagatacccttaggtggcaatacatcctttgttacccacacaaaaatctgacacgtagtcacgtg 50630535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 51898784 - 51898706
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||| | |||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  51898784 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 51898706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 48716382 - 48716305
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||| | ||||| ||||||||||||||||||||||||    
T  48716382 gagtaatgatacatagacacccttaggtggcaatacaccatttgacatccacacaaaaatctgacacgtagtcacgtg 48716305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 8346490 - 8346411
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||| |||| |||||||| |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  8346490 aagagtaatgatacatagtcacctttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtg 8346411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 38632423 - 38632344
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||| ||| | | ||||| ||||||||||||||||||||||||    
T  38632423 aagagtaatgatacatagacacccttaggtggcaatacaccttttaacatccacacaaaaatctgacacgtagtcacgtg 38632344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 44548473 - 44548399
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| ||||||| | |||||||| |||| ||| ||||||||||||| ||||||||||||||||||||||||    
T  44548473 taatgatacatagacatctttaggtggcaatacaccatttgatacccacacaaaaatctgacacgtagtcacgtg 44548399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 27564835 - 27564758
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| |||||||||| |||| ||| ||||| ||||||| |||||||||||||||| |||||||    
T  27564835 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtg 27564758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 219 - 289
Target Start/End: Complemental strand, 23597193 - 23597123
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||||||||| ||||||| | |||||||| |||| || |||||||||||||| |||||||||||||||    
T  23597193 aagagtaatgatacatagacatcattaggtggcaatacactctttgatacccacataaaaatctgacacgt 23597123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 37649198 - 37649275
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| | |||||||| |||| || |||||| ||||||| ||||||||||||||| ||||||||    
T  37649198 gagtaatgatacatagacatctttaggtggcaatacactctttgacacccacacaaaaatctgacacgtggtcacgtg 37649275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Original strand, 32813245 - 32813321
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||| | ||||||| ||||||||||||||| |||||    
T  32813245 aagagttatgatacatagacatccttaggtggcaatacaccctttaacacccacacaaaaatctgacacgtggtcac 32813321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 26274430 - 26274509
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||| |||||||| ||||||||||||| |||| |||| | | ||||| | ||||||||||||||||||| ||||||||||    
T  26274430 aagaataatgatacatagacacccttatgtggcaatacatcatttgacatccacagaaaaatctgacacatagtcacgtg 26274509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 41758804 - 41758879
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    |||||||||||| ||||||||| |||  ||| |||| ||||||||| | ||||| |||||||||||||||||||||    
T  41758804 agagtaatgatacatagacaccattaaatggcaatacaccctttgacaaccacacaaaaatctgacacgtagtcac 41758879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 43132 - 43209
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||  |||||| |  |||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  43132 gagtaatgatacatagacagtcttaggagacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 43209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 50591100 - 50591035
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  50591100 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 50591035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 294
Target Start/End: Complemental strand, 11152476 - 11152405
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||||||| | ||||||||| |||||||| |||| |||||| || | ||||| ||||||||||||||||||||    
T  11152476 agtaatgaaacatagacacc-ttaggtggcaatacacccttcgacatccacacaaaaatctgacacgtagtca 11152405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 49811629 - 49811557
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||||| |||||| ||||||| |||||||||  |||| ||| ||||| | ||||| |||||||||||||||||    
T  49811629 aagagttatgatagatagacatccttaggtgacaatacaccatttgacatccacacaaaaatctgacacgtag 49811557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 252 - 298
Target Start/End: Original strand, 13414792 - 13414838
Alignment:
Q  252 aatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  13414792 aatacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 13414838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 59; Significance: 5e-25; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 36362025 - 36362103
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||||||||||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  36362025 agagtaatgatacatagacacccttaggtggtaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 36362103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 35137533 - 35137610
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  35137533 gagtaatgataaatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 35137610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 8080486 - 8080406
Alignment:
Q  218 caagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||||| |||||||||||||||||| |||| ||||||||| ||| ||| ||||||||||||||||||||||||    
T  8080486 caagagtaatgatacatagacacccttaggtggcaatacaccctttgacacctacataaaaatctgacacgtagtcacgtg 8080406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 7389387 - 7389466
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| || |||||| ||||||| ||||||||||||||||||||||||    
T  7389387 aagagtaatgatacatagacacccttaggtggcaatacactctttgacacccacacaaaaatctgacacgtagtcacgtg 7389466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 40957705 - 40957784
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||| ||||||||| |||| || |||||||||||||| ||||||||||||||||||||||||    
T  40957705 aagagtaatgatacatagacactcttaggtggcaatacactctttgatacccacacaaaaatctgacacgtagtcacgtg 40957784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 36362014 - 36361936
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||||||||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  36362014 agagtaatgatacatagacacccttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 36361936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 3434561 - 3434639
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||| ||||| ||||||||||||||||||    
T  3434561 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaaactgacacgtagtcacgtg 3434639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 38267040 - 38267117
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||| |||  |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  38267040 gagtaatgatacatagacacccttatgtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 38267117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 19436290 - 19436210
Alignment:
Q  218 caagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||||| ||||||| |||||||||  |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  19436290 caagagtaatgatacatagacatccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtg 19436210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 38837215 - 38837294
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||  | ||| ||| ||||||||||||||||||||||||    
T  38837215 aagagtaatgatacatagacacccttaggtggcaatacacccttgtacacctacacaaaaatctgacacgtagtcacgtg 38837294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 3783998 - 3784072
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| |||||||||||||||||| |||| | | ||||| ||||||| ||||||||||||||||||||||||    
T  3783998 taatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgtagtcacgtg 3784072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 4999614 - 4999537
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||| ||| |||| ||| ||||| ||||||| |||||||||| |||||||||||||    
T  4999614 gagtaatgatacatagacacccttagatggcaatacaccttttgacacccacacaaaaatctgatacgtagtcacgtg 4999537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 19329842 - 19329919
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| |||||||||| |||| ||| ||||| ||||||| |||||||||||||||| |||||||    
T  19329842 gagtaatgatacatagacatccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtaatcacgtg 19329919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 287
Target Start/End: Complemental strand, 10343665 - 10343597
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacac 287  Q
    ||||||||||||| |||||||||||||||||| |||| ||   |||| ||||||| |||||||||||||    
T  10343665 aagagtaatgatacatagacacccttaggtggaaatacacatcttgacacccacacaaaaatctgacac 10343597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 36208171 - 36208250
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||| ||||||||||||||||||||||| |  | |||| ||||||| ||||| |||||| || ||||||||    
T  36208171 aagagttatgatacatagacacccttaggtggtaatacattcattgacacccacacaaaaagctgacatgtggtcacgtg 36208250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 294
Target Start/End: Original strand, 3694370 - 3694440
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||||||| ||| |||||||||||||  |||| ||| ||| | ||||||| ||||||||||||||||||||    
T  3694370 taatgatatatacacacccttaggtgacaatacaccttttaacacccacacaaaaatctgacacgtagtca 3694440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 294
Target Start/End: Original strand, 8238212 - 8238286
Alignment:
Q  221 gagtaatgataaatagacaccct-taggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||| |||||| ||| ||||||| ||||||| |||| ||||||||| ||||||| |||||||||||| |||||||    
T  8238212 gagttatgatacataaacaccctgtaggtggcaatacaccctttgacacccacacaaaaatctgacatgtagtca 8238286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 22343360 - 22343426
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  22343360 agagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 22343426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Original strand, 38044195 - 38044267
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| | ||||| |||||||||||| ||||    
T  38044195 aagagttatgatacataaacacccttaggtggcaatacaccccttgacatccacacaaaaatctgacatgtag 38044267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 39256023 - 39255955
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||| |||||| ||||||| |||||||||| |||| |||  |||||||||| | |||||||||||||||    
T  39256023 gagttatgatacatagacaaccttaggtggcaatacaccacttgatacccatacaaaaatctgacacgt 39255955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 46374902 - 46374834
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||| |||||| ||||||| |||||||||| || | ||||||| | ||||||| |||||||||||||||    
T  46374902 gagttatgatacatagacatccttaggtggcaacacaccctttaacacccacacaaaaatctgacacgt 46374834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 219 - 270
Target Start/End: Original strand, 11044186 - 11044237
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgataccc 270  Q
    ||||||||||||| |||||||||||||||||| |||| | ||||||| ||||    
T  11044186 aagagtaatgatacatagacacccttaggtggcaatacatcctttgacaccc 11044237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 220 - 295
Target Start/End: Complemental strand, 46033902 - 46033827
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    ||||| |||||| ||||| |  ||||||||| |||| ||||||| | ||||||| ||||||||||||||| |||||    
T  46033902 agagttatgatacatagatattcttaggtggcaatacaccctttaacacccacataaaaatctgacacgtggtcac 46033827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Original strand, 41915740 - 41915806
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||| |||||| ||| |||||||||||||| |||| |||| |||| ||| ||| ||||||||||||    
T  41915740 agagttatgatacataaacacccttaggtggcaatacaccccttgacacctacacaaaaatctgaca 41915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 26296643 - 26296712
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||| |||||| ||||||| |||||||||  |||||||||||| | | ||||| |||||||||| ||||    
T  26296643 agagttatgatacatagacatccttaggtgacaatataccctttaacatccacataaaaatctgatacgt 26296712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 298
Target Start/End: Complemental strand, 32951592 - 32951516
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||| |||||||| ||||| ||  |||| | ||||| | | ||||| |||||||| |||||||||||||||    
T  32951592 agtaatgatacatagacactcttagatgacaatacatcctttaacatccacacaaaaatctaacacgtagtcacgtg 32951516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 1180040 - 1179967
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  1180040 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtagtca 1179967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 34012396 - 34012319
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||    
T  34012396 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtg 34012319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 44507188 - 44507110
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||||||||||||||||||| || |||| | ||||||| ||||||||||||||||||||||||    
T  44507188 agagtaatgatacatagacacccttaggtggtaatacactctttaacacccacacaaaaatctgacacgtagtcacgtg 44507110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 504221 - 504144
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  504221 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtg 504144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 12831047 - 12831124
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||  |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  12831047 gagtaatgatacatagacacccttaggtgacaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 12831124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 15197333 - 15197410
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||| ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  15197333 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 15197410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 14547920 - 14547999
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| |||| |||||||||||||||||| |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  14547920 aagagtaaagatacatagacacccttaggtggcaatacaccatttgacacccacacaaaaatctgacacgtagtcacgtg 14547999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 37038478 - 37038556
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||| | |||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  37038478 agagtaatgatacatagacatctttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 37038556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 23122697 - 23122620
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||| |||| |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  23122697 gagtaatgatacatagacacccttaagtggcaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtg 23122620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 222 - 298
Target Start/End: Original strand, 5957831 - 5957907
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||| |||||||  ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  5957831 agtaatgatacatagacattcttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 5957907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 226 - 291
Target Start/End: Complemental strand, 10621182 - 10621117
Alignment:
Q  226 atgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||||| ||||||| ||||||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  10621182 atgatacatagacatccttaggtggtaatacaccctttgacacccacacaaaaatctgacacgtag 10621117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 40424043 - 40423970
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||| ||||| |||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||    
T  40424043 gagtaatgatacatagatacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtca 40423970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 10284733 - 10284654
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||| ||||||||||||| |||  |||| || |||||| ||||||| |||||| |||||||||||||||||    
T  10284733 aagagttatgatacatagacacccttaagtgacaatacactctttgacacccacacaaaaatttgacacgtagtcacgtg 10284654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 20075034 - 20074966
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||||||| ||||||| |||||||||| |||| || |||||| ||||||| |||||| ||||||||    
T  20075034 gagtaatgatacatagacatccttaggtggcaatacactctttgacacccacataaaaatgtgacacgt 20074966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 16383375 - 16383442
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  16383375 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 16383442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 34307214 - 34307281
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  34307214 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 34307281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 8841513 - 8841455
Alignment:
Q  240 cccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| | || ||||||||| ||||||| |||||||| |||||||||||||||    
T  8841513 cccttaggtggcagtacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 8841455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 221 - 291
Target Start/End: Complemental strand, 15048281 - 15048212
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||||| ||| ||| |||||||||||||||||    
T  15048281 gagttatgatacatagacatccttaggtggcaatacaccctttgacacc-acacaaaaatctgacacgtag 15048212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 4854965 - 4854900
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctga 284  Q
    ||||||||||||| ||||||| |||||||||| |||| ||||||| | ||| ||| ||||||||||    
T  4854965 aagagtaatgatacatagacatccttaggtggcaatacaccctttaacacctacataaaaatctga 4854900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 30479574 - 30479509
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||| |||||| ||| |||||||||||||| |||| ||||||||| | ||||| ||||||||||||    
T  30479574 gagttatgatacataaacacccttaggtggcaatacaccctttgacatccacataaaaatctgaca 30479509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Original strand, 24307627 - 24307692
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctga 284  Q
    |||||| |||||| ||| |||||||||||||| |||| | || |||| ||||||| ||||||||||    
T  24307627 aagagttatgatacataaacacccttaggtggcaatacatccattgacacccacacaaaaatctga 24307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 284
Target Start/End: Complemental strand, 24307895 - 24307830
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctga 284  Q
    |||||| |||||| ||| |||||||||||||| |||| | || |||| ||||||| ||||||||||    
T  24307895 aagagttatgatacataaacacccttaggtggcaatacatcccttgacacccacacaaaaatctga 24307830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 2e-24; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 33149738 - 33149661
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||| ||||||| |||||| |||||||||||||||||    
T  33149738 gagtaatgatacatagacacccttaggtggtaatacaccctttgacacccacacaaaaatttgacacgtagtcacgtg 33149661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 18520986 - 18520907
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||| |||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  18520986 aagaataatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 18520907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 2740273 - 2740351
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| ||||||| |||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  2740273 agagtaatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 2740351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 14831814 - 14831891
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||| ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  14831814 gagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtg 14831891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 36733044 - 36732965
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||| | |||| ||||||||| ||||||| ||||||||||||| ||||||||||    
T  36733044 aagagtaatgatacatagacacccttaggtagcaatacaccctttgacacccacacaaaaatctgacacatagtcacgtg 36732965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 35785199 - 35785276
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||    
T  35785199 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtg 35785276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 40145407 - 40145484
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||||||| | | ||||| ||||||||||||||||||||||||    
T  40145407 gagtaatgatacatagacacccttaggtggcaatacaccctttaacatccacacaaaaatctgacacgtagtcacgtg 40145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 13811650 - 13811729
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| |||| |||||||||||||||||| |||| | | ||||| ||||||| ||||||||||||||||||||||||    
T  13811650 aagagtaaagatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagtcacgtg 13811729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 294
Target Start/End: Complemental strand, 42414402 - 42414329
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||| |||||||||  ||||||| |||| ||||||||| ||||||| ||||||||||||||||||||    
T  42414402 gagtaatgatacatagacaccagtaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtca 42414329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 221 - 295
Target Start/End: Original strand, 28177775 - 28177849
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||| ||||||||||||||| |||||    
T  28177775 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtggtcac 28177849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 35943992 - 35943915
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||| |||||| |||||||||||||||||| |||| | | ||||| ||||||| |||||||||||||||||| |||||    
T  35943992 gagttatgatacatagacacccttaggtggcaatacatcatttgacacccacacaaaaatctgacacgtagttacgtg 35943915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 280
Target Start/End: Complemental strand, 36875702 - 36875644
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaat 280  Q
    |||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||    
T  36875702 agtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaat 36875644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 3921367 - 3921300
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  3921367 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 3921300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 6679697 - 6679772
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    ||||| |||||| ||||||| | |||||||| |||| ||| ||||| ||||||| ||||||||||||||| |||||    
T  6679697 agagttatgatacatagacatctttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtggtcac 6679772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 15409712 - 15409640
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||||| |||||| ||||||| |||||||||  |||| |  |||||| ||||||| |||||||||||||||||    
T  15409712 aagagttatgatacatagacatccttaggtgacaatacattctttgacacccacacaaaaatctgacacgtag 15409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 26720516 - 26720584
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||| | ||| ||| |||||||||||||||    
T  26720516 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgt 26720584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 221 - 289
Target Start/End: Original strand, 26990265 - 26990333
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||| | ||| ||| |||||||||||||||    
T  26990265 gagttatgatacatagacatccttaggtggcaatacaccctttaacacctacaaaaaaatctgacacgt 26990333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 286
Target Start/End: Complemental strand, 2252269 - 2252203
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||| |||||| ||| ||| |||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  2252269 agagttatgatacataaacatccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 2252203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 41470517 - 41470439
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| ||| ||||||||| |||||||| |||| | ||||| | |  || | ||||||||||||||||||||||||    
T  41470517 agagtaataatacatagacacctttaggtggcaatacatcctttaaaattcatataaaaatctgacacgtagtcacgtg 41470439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 33825424 - 33825356
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||||||  |||||||  ||||||||| |||| || | |||| ||||||| |||||||||||||||    
T  33825424 gagtaatgatgcatagacattcttaggtggcaatacactccttgacacccacataaaaatctgacacgt 33825356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 3e-23; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 294
Target Start/End: Original strand, 9058478 - 9058553
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||    
T  9058478 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtca 9058553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 30915461 - 30915540
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||  |||||| ||||||||||||||||||||||||    
T  30915461 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacccccacataaaaatctgacacgtagtcacgtg 30915540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 33436202 - 33436123
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| ||||||| |||||||| |||||||||||||||    
T  33436202 aagagtaatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctaacacgtagtcacgtg 33436123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 5574589 - 5574511
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||| ||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  5574589 agagtaatgatacatagacactcttaggtggcaatacaccctttgacacccacataaaaatctgacacgtagtcacgtg 5574511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 7465836 - 7465758
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||||||||| ||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  7465836 agagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 7465758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 224 - 298
Target Start/End: Original strand, 28863458 - 28863532
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  28863458 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 28863532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 17473020 - 17473097
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||| ||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  17473020 gagtaatgatacatagacacccttagatggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 17473097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 10249484 - 10249405
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||  |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  10249484 aagagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtg 10249405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 38882915 - 38882837
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||||||    
T  38882915 aagagtaatgatacatagacacccttaggtggcaata-accctttgacatccacacaaaaatctgacacgtagtcacgtg 38882837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 220 - 298
Target Start/End: Complemental strand, 32505749 - 32505671
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||||||||||||  |||| ||| ||||| ||||||| ||||||||||||||||||||||||    
T  32505749 agagtaatgatacatagacacccttaggtgacaatacaccttttgacacccacacaaaaatctgacacgtagtcacgtg 32505671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 13438343 - 13438420
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||  |||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  13438343 gagtaatgatacatagacacccttaggtgacaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 13438420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 40701478 - 40701555
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| ||| ||||| ||||||| |||||||||||||||||| |||||    
T  40701478 gagtaatgatacatagacacccttaggtggcaatacaccttttgacacccacacaaaaatctgacacgtagttacgtg 40701555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 224 - 294
Target Start/End: Complemental strand, 19930917 - 19930847
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtca 294  Q
    |||||||| |||||||||||||||||| |||| ||||||||| | ||||| ||||||||||||||||||||    
T  19930917 taatgatacatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtca 19930847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 221 - 295
Target Start/End: Complemental strand, 28381755 - 28381681
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    ||||||||||| |||||||||||||||||| |||| ||| || || ||||||| |||||||||||||||||||||    
T  28381755 gagtaatgatacatagacacccttaggtggcaatacacctttcgacacccacacaaaaatctgacacgtagtcac 28381681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 27864704 - 27864781
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||||||| |||| |||| ||||||||| | ||||| |||||||||||||||| |||||||    
T  27864704 gagtaatgatacatagacacccttatgtggcaatacaccctttgacatccacacaaaaatctgacacgtaatcacgtg 27864781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 20700813 - 20700892
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||||||| ||||| |||| |||| |||||||||  || ||| ||||||||||||||||||||||||    
T  20700813 aagagtaatgatacatagacatccttatgtggcaatacaccctttgactcctacacaaaaatctgacacgtagtcacgtg 20700892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 4060685 - 4060762
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||  |||| ||| ||||| | ||||| |||||||||||||||||| |||||    
T  4060685 gagtaatgatacatagacacccttaggtgacaatacaccttttgacatccacacaaaaatctgacacgtagttacgtg 4060762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 40614002 - 40613934
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||| |||||| ||||||| |||||||||| |||| ||||||||| ||||||| |||||||||||||||    
T  40614002 gagttatgatacatagacatccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgt 40613934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 220 - 289
Target Start/End: Original strand, 33436210 - 33436279
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||||||||||| ||||||| |||||| ||| |||| ||| ||||| ||||||| |||||||||||||||    
T  33436210 agagtaatgatacatagacatccttagatggcaatacaccttttgacacccacataaaaatctgacacgt 33436279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 26891606 - 26891527
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||| |||| ||||||||||||| |||| |||| | || ||||||| |||||||||||| || ||||||||    
T  26891606 aagagttatgatacatagccacccttaggtggcaatacacccctagacacccacacaaaaatctgacatgtggtcacgtg 26891527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 291
Target Start/End: Complemental strand, 38273244 - 38273172
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    |||||| |||||| |||||||  ||||| ||| |||| ||||||| | ||||||| |||||||||||||||||    
T  38273244 aagagttatgatacatagacattcttagatggcaatacaccctttaacacccacacaaaaatctgacacgtag 38273172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 42257191 - 42257261
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    |||||| |||||| ||||||| | |||||||| |||| | | ||||| ||||||| |||||||||||||||    
T  42257191 aagagttatgatacatagacatctttaggtggcaatacatcatttgacacccacataaaaatctgacacgt 42257261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 286
Target Start/End: Original strand, 13365369 - 13365418
Alignment:
Q  237 acacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||||||| ||| ||||||||| |||| ||||||| ||||||||||||    
T  13365369 acacccttagatggcaatataccccttgacacccacacaaaaatctgaca 13365418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 221 - 286
Target Start/End: Original strand, 43490121 - 43490186
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||| |||||| ||| |||||||||||||  |||| |||| |||| ||||||| ||||||||||||    
T  43490121 gagttatgatacataaacacccttaggtgacaatacaccccttgacacccacacaaaaatctgaca 43490186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 41758607 - 41758655
Alignment:
Q  243 ttaggtggtaatataccctttgatacccacagaaaaatctgacacgtag 291  Q
    ||||||||||||||||| ||||| ||| | | |||||||||||||||||    
T  41758607 ttaggtggtaatataccttttgacacctatataaaaatctgacacgtag 41758655  T

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Target: chr6 (Bit Score: 54; Significance: 5e-22; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 32869678 - 32869755
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||| |||||||||||||||||| |||| ||||||||| ||||||| ||||||||||||||||||||||||    
T  32869678 gagtaaagatacatagacacccttaggtggcaatacaccctttgacacccacacaaaaatctgacacgtagtcacgtg 32869755  T

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Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 221 - 297
Target Start/End: Complemental strand, 31109500 - 31109424
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgt 297  Q
    |||||||||| ||||||||||||||||||| |||| ||||||||| | ||||| |||||||||||||||||||||||    
T  31109500 gagtaatgattaatagacacccttaggtggcaatacaccctttgacatccacacaaaaatctgacacgtagtcacgt 31109424  T

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Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 224 - 298
Target Start/End: Complemental strand, 22880755 - 22880681
Alignment:
Q  224 taatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||| |||||||||||||||||| |||| ||||||||| ||||||| |||| |||||||||||||||||||    
T  22880755 taatgatacatagacacccttaggtggcaatacaccctttgacacccacacaaaattctgacacgtagtcacgtg 22880681  T

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Target: chr6; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 220 - 298
Target Start/End: Original strand, 11427615 - 11427695
Alignment:
Q  220 agagtaatgataaatagacaccct--taggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||||||||| |||||||||||  ||||||| |||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  11427615 agagtaatgatacatagacaccctcttaggtggcaatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 11427695  T

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Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 17598554 - 17598631
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| |||||||||||||||||| |||| | | ||||| ||||||| ||||||||||||||| ||||||||    
T  17598554 gagtaatgatacatagacacccttaggtggcaatacatcttttgacacccacacaaaaatctgacacgttgtcacgtg 17598631  T

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Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 6209567 - 6209488
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| |||||||||||||||||| |||| ||  ||||| || |||| ||||||||| ||||||||||||||    
T  6209567 aagagtaatgatacatagacacccttaggtggcaatacactatttgacactcacacaaaaatctgtcacgtagtcacgtg 6209488  T

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Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 23128229 - 23128150
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||| |||||||| ||||||||| ||| ||| ||||| | ||||||| ||||||| ||||||||||||||||||||||||    
T  23128229 aagaataatgatatatagacacctttatgtgataatacatcctttgacacccacacaaaaatctgacacgtagtcacgtg 23128150  T

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Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 295
Target Start/End: Original strand, 31976247 - 31976322
Alignment:
Q  220 agagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcac 295  Q
    ||||| |||||| ||||||| |||||||||| |||||||||||| | ||||||| ||||||||||||||| |||||    
T  31976247 agagttatgatacatagacatccttaggtggcaatataccctttaacacccacacaaaaatctgacacgtggtcac 31976322  T

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Target: chr6; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 219 - 298
Target Start/End: Original strand, 15832575 - 15832654
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||||| ||||||||| |||||||  |||| | | ||||| ||||||| |||||| |||||||||||||||||    
T  15832575 aagagtaatgatacatagacacctttaggtgacaataaatcatttgacacccacacaaaaatttgacacgtagtcacgtg 15832654  T

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Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 29857827 - 29857904
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||| |||| ||| |||| ||| ||| | ||||||| |||||||||||||||||| |||||    
T  29857827 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtg 29857904  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 31953130 - 31953065
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    ||||||||||| ||||||| |||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  31953130 gagtaatgatagatagacatccttaggtggcaatacaccccttgacacccacataaaaatctgaca 31953065  T

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Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 946377 - 946452
Alignment:
Q  222 agtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgt 297  Q
    ||||| |||| ||||||| ||||||||| ||||| ||||||||| ||| ||  ||||||||||||| |||||||||    
T  946377 agtaacgatacatagacatccttaggtgataatacaccctttgacacctacccaaaaatctgacacctagtcacgt 946452  T

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Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 15990144 - 15990077
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  15990144 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15990077  T

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Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 30341462 - 30341395
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  30341462 aagagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 30341395  T

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Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 221 - 286
Target Start/End: Complemental strand, 15508124 - 15508059
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgaca 286  Q
    |||| |||||| ||| |||||||||||||| |||| |||| |||| ||||||| ||||||||||||    
T  15508124 gagttatgatacataaacacccttaggtggcaatacaccccttgacacccacacaaaaatctgaca 15508059  T

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Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 219 - 290
Target Start/End: Complemental strand, 31110861 - 31110792
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgta 290  Q
    |||||| |||||| ||||||| |||||||||| |||| ||||||||| || ||||  |||||||||||||||    
T  31110861 aagagttatgatacatagacatccttaggtggcaatacaccctttgacactcaca--aaaatctgacacgta 31110792  T

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Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 12732480 - 12732550
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgt 289  Q
    ||||||||||||| |||||||  |||| |||| ||||||  | |||| ||||||| |||||||||||||||    
T  12732480 aagagtaatgatacatagacattcttaagtggcaatataatcattgacacccacacaaaaatctgacacgt 12732550  T

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Target: scaffold0321 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 219 - 298
Target Start/End: Complemental strand, 10211 - 10132
Alignment:
Q  219 aagagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    |||||| |||||| ||||||||| |||||||| |||| | ||||||| | ||||| ||||||||||||||||||||||||    
T  10211 aagagttatgatacatagacacctttaggtggcaatacatcctttgacatccacataaaaatctgacacgtagtcacgtg 10132  T

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Target: scaffold1268 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 1029 - 952
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| | |||||||| |||| ||||||| | | ||||| ||||| ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtg 952  T

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Target: scaffold1267 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Complemental strand, 1029 - 952
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||| | |||||||| |||| ||||||| | | ||||| ||||| ||||||||||||||||||    
T  1029 gagtaatgatacatagacatctttaggtggcaatacaccctttaacatccacacaaaaaactgacacgtagtcacgtg 952  T

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Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 221 - 298
Target Start/End: Original strand, 4029 - 4106
Alignment:
Q  221 gagtaatgataaatagacacccttaggtggtaatataccctttgatacccacagaaaaatctgacacgtagtcacgtg 298  Q
    ||||||||||| ||||||||| |||| ||| |||| ||| ||| | ||||||| |||||||||||||||||| |||||    
T  4029 gagtaatgatacatagacacctttagatggcaatacaccttttaacacccacacaaaaatctgacacgtagttacgtg 4106  T

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