View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4850_low_63 (Length: 231)
Name: NF4850_low_63
Description: NF4850
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4850_low_63 |
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Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 24065960 - 24065748
Alignment:
| Q |
1 |
actatagaactattctaatctagaagggttgatatttggacgtggaaaatttgttcttctgaatttgattgatgggaatgaatttgggatggattcatga |
100 |
Q |
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| T |
24065960 |
actatggaactattctaatctagaagggttgatatttggacgtggaaaatttgttcttctgaatttgattgatgggaatgaatttgggatggattcatga |
24065861 |
T |
|
| Q |
101 |
aacccctttggggacaaatatctggtatggttctaaaatggacaatcacttattaaaataatacactgtattgtgtagaccaatgttagctggttctcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24065860 |
aacccctttggggacaaatatctggtatggttctaaaatggacaatcacttattaaaataatacactgtattgtgtagaccaatgttagctggttctcat |
24065761 |
T |
|
| Q |
201 |
gtgatggattgtg |
213 |
Q |
| |
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||||||||||||| |
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| T |
24065760 |
gtgatggattgtg |
24065748 |
T |
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