View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4851-Insertion-7 (Length: 138)

Name: NF4851-Insertion-7
Description: NF4851
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4851-Insertion-7
NF4851-Insertion-7
[»] scaffold0031 (1 HSPs)
scaffold0031 (7-138)||(46281-46412)
[»] chr8 (50 HSPs)
chr8 (7-138)||(15961139-15961270)
chr8 (7-138)||(18997707-18997838)
chr8 (7-138)||(30473975-30474106)
chr8 (7-138)||(44832277-44832408)
chr8 (7-138)||(6299111-6299242)
chr8 (7-138)||(10477944-10478075)
chr8 (7-138)||(32110952-32111083)
chr8 (7-138)||(995906-996037)
chr8 (7-134)||(11725201-11725328)
chr8 (7-138)||(18175388-18175519)
chr8 (7-134)||(28582866-28582993)
chr8 (7-134)||(39257454-39257581)
chr8 (7-134)||(40026811-40026938)
chr8 (7-134)||(18568876-18569003)
chr8 (7-134)||(19240674-19240801)
chr8 (7-134)||(19313858-19313985)
chr8 (7-134)||(24408887-24409014)
chr8 (7-134)||(28274305-28274432)
chr8 (7-134)||(44836920-44837047)
chr8 (7-134)||(35122413-35122540)
chr8 (7-134)||(19412842-19412970)
chr8 (10-134)||(24004821-24004945)
chr8 (7-134)||(18841915-18842042)
chr8 (7-134)||(18210715-18210842)
chr8 (7-132)||(11142474-11142605)
chr8 (27-134)||(23353688-23353795)
chr8 (7-110)||(39997726-39997829)
chr8 (78-134)||(25875461-25875517)
chr8 (85-134)||(18481929-18481978)
chr8 (99-134)||(39997673-39997708)
chr8 (99-130)||(996085-996116)
chr8 (99-130)||(6299290-6299321)
chr8 (99-130)||(10477865-10477896)
chr8 (99-130)||(11142393-11142424)
chr8 (99-130)||(11725118-11725149)
chr8 (99-130)||(18175309-18175340)
chr8 (99-130)||(18210893-18210924)
chr8 (99-130)||(18997628-18997659)
chr8 (99-130)||(19240592-19240623)
chr8 (99-130)||(19313776-19313807)
chr8 (99-130)||(19412764-19412795)
chr8 (99-130)||(23353846-23353877)
chr8 (99-130)||(24408807-24408838)
chr8 (99-130)||(30474153-30474184)
chr8 (99-130)||(32111131-32111162)
chr8 (99-130)||(35122585-35122616)
chr8 (99-130)||(39257370-39257401)
chr8 (99-130)||(39997592-39997623)
chr8 (99-130)||(44832457-44832488)
chr8 (99-130)||(44836836-44836867)
[»] chr7 (34 HSPs)
chr7 (7-138)||(3840732-3840863)
chr7 (7-138)||(21804663-21804794)
chr7 (7-138)||(27138619-27138750)
chr7 (7-138)||(38163430-38163561)
chr7 (7-138)||(42242245-42242376)
chr7 (7-138)||(33917038-33917169)
chr7 (7-138)||(21341830-21341961)
chr7 (7-134)||(21656639-21656766)
chr7 (7-134)||(21669992-21670119)
chr7 (7-138)||(31373463-31373594)
chr7 (7-134)||(43933635-43933762)
chr7 (10-134)||(16376639-16376763)
chr7 (7-138)||(17178328-17178460)
chr7 (10-134)||(40968902-40969026)
chr7 (7-134)||(15109756-15109883)
chr7 (7-134)||(24924090-24924217)
chr7 (10-134)||(13786181-13786305)
chr7 (10-134)||(27903511-27903635)
chr7 (10-134)||(21753586-21753710)
chr7 (10-110)||(39030346-39030446)
chr7 (97-138)||(31096707-31096748)
chr7 (99-138)||(15109930-15109969)
chr7 (99-130)||(3840912-3840943)
chr7 (99-134)||(16376812-16376847)
chr7 (99-130)||(17178508-17178539)
chr7 (99-130)||(21341749-21341780)
chr7 (99-130)||(21656559-21656590)
chr7 (99-130)||(21669907-21669938)
chr7 (99-130)||(21804842-21804873)
chr7 (99-130)||(24924010-24924041)
chr7 (99-130)||(27138798-27138829)
chr7 (99-130)||(31373382-31373413)
chr7 (99-130)||(33917217-33917248)
chr7 (99-130)||(42242424-42242455)
[»] chr6 (27 HSPs)
chr6 (7-138)||(12597356-12597487)
chr6 (7-138)||(19997672-19997803)
chr6 (7-138)||(28099688-28099819)
chr6 (7-138)||(33645949-33646080)
chr6 (7-134)||(13533778-13533905)
chr6 (7-134)||(17202443-17202570)
chr6 (7-134)||(10584819-10584946)
chr6 (7-134)||(15044733-15044860)
chr6 (19-134)||(8539611-8539726)
chr6 (7-138)||(2266775-2266914)
chr6 (10-134)||(2005439-2005563)
chr6 (18-138)||(25448756-25448876)
chr6 (7-134)||(3592904-3593031)
chr6 (7-134)||(17594827-17594955)
chr6 (10-55)||(33035523-33035568)
chr6 (7-41)||(1405654-1405688)
chr6 (99-130)||(2266696-2266727)
chr6 (99-130)||(3592824-3592855)
chr6 (99-130)||(8539528-8539559)
chr6 (99-130)||(10584996-10585027)
chr6 (99-130)||(12597535-12597566)
chr6 (99-130)||(15044651-15044682)
chr6 (99-130)||(17202360-17202391)
chr6 (99-130)||(17594745-17594776)
chr6 (99-130)||(19997592-19997623)
chr6 (99-130)||(28099868-28099899)
chr6 (99-130)||(33645870-33645901)
[»] chr5 (39 HSPs)
chr5 (7-138)||(17373255-17373386)
chr5 (7-138)||(20874695-20874826)
chr5 (7-138)||(33570398-33570529)
chr5 (7-138)||(34107429-34107560)
chr5 (7-138)||(34110659-34110790)
chr5 (7-138)||(38246956-38247087)
chr5 (7-138)||(10729533-10729664)
chr5 (7-138)||(14141198-14141329)
chr5 (7-138)||(16526397-16526528)
chr5 (7-138)||(2399033-2399162)
chr5 (7-134)||(27647941-27648068)
chr5 (10-134)||(29275635-29275759)
chr5 (7-134)||(1396000-1396127)
chr5 (7-133)||(6940594-6940720)
chr5 (10-134)||(20655143-20655267)
chr5 (7-134)||(1394577-1394704)
chr5 (7-134)||(5479207-5479334)
chr5 (15-134)||(33375773-33375892)
chr5 (7-134)||(24223255-24223382)
chr5 (10-134)||(25099330-25099454)
chr5 (10-134)||(25158420-25158544)
chr5 (10-134)||(17913752-17913876)
chr5 (7-66)||(40177120-40177179)
chr5 (99-130)||(1395919-1395950)
chr5 (99-130)||(2399210-2399241)
chr5 (99-130)||(5479127-5479158)
chr5 (99-130)||(6940768-6940799)
chr5 (99-130)||(10729712-10729743)
chr5 (99-130)||(14141377-14141408)
chr5 (99-130)||(16526577-16526608)
chr5 (99-130)||(17373434-17373465)
chr5 (99-130)||(20874616-20874647)
chr5 (99-130)||(24223434-24223465)
chr5 (99-130)||(27647857-27647888)
chr5 (99-130)||(33570578-33570609)
chr5 (99-130)||(34107608-34107639)
chr5 (99-130)||(34110578-34110609)
chr5 (99-130)||(38247135-38247166)
chr5 (99-130)||(40177045-40177076)
[»] chr4 (38 HSPs)
chr4 (7-138)||(16917979-16918110)
chr4 (7-138)||(31966060-31966191)
chr4 (7-138)||(52434631-52434762)
chr4 (7-138)||(53143353-53143484)
chr4 (7-138)||(30825013-30825144)
chr4 (7-138)||(37651673-37651804)
chr4 (7-134)||(16905043-16905170)
chr4 (7-138)||(12090550-12090682)
chr4 (7-134)||(35760592-35760719)
chr4 (7-134)||(45977081-45977208)
chr4 (10-134)||(44376173-44376297)
chr4 (7-134)||(33139562-33139689)
chr4 (7-134)||(45782520-45782647)
chr4 (7-134)||(46256045-46256172)
chr4 (7-134)||(48118622-48118749)
chr4 (10-134)||(37590898-37591022)
chr4 (7-134)||(31628578-31628705)
chr4 (7-134)||(39058448-39058575)
chr4 (10-134)||(41387137-41387261)
chr4 (7-134)||(52098281-52098409)
chr4 (8-134)||(47142892-47143018)
chr4 (10-134)||(50229800-50229925)
chr4 (7-134)||(54624968-54625088)
chr4 (23-70)||(34684603-34684650)
chr4 (99-130)||(12090730-12090761)
chr4 (99-130)||(16905218-16905249)
chr4 (99-130)||(16918158-16918189)
chr4 (99-130)||(30825192-30825223)
chr4 (99-130)||(31966239-31966270)
chr4 (99-130)||(39058622-39058653)
chr4 (99-130)||(45782697-45782728)
chr4 (99-130)||(45977264-45977295)
chr4 (99-130)||(47143070-47143101)
chr4 (99-130)||(48118802-48118833)
chr4 (99-130)||(52098460-52098491)
chr4 (99-130)||(52434552-52434583)
chr4 (99-130)||(53143534-53143565)
chr4 (99-130)||(54624891-54624922)
[»] chr3 (39 HSPs)
chr3 (7-138)||(12264207-12264338)
chr3 (7-138)||(21098311-21098442)
chr3 (7-138)||(38654018-38654149)
chr3 (7-138)||(43363702-43363833)
chr3 (7-138)||(49672569-49672700)
chr3 (7-138)||(54073034-54073165)
chr3 (7-138)||(1941811-1941942)
chr3 (7-138)||(3898429-3898560)
chr3 (7-138)||(34121362-34121493)
chr3 (7-138)||(49506440-49506571)
chr3 (7-134)||(20671260-20671387)
chr3 (7-134)||(26948809-26948936)
chr3 (7-134)||(36076545-36076672)
chr3 (7-134)||(39146451-39146578)
chr3 (7-134)||(4584525-4584652)
chr3 (7-134)||(24119218-24119345)
chr3 (7-134)||(31488422-31488549)
chr3 (7-138)||(45557975-45558106)
chr3 (7-134)||(49478219-49478346)
chr3 (7-134)||(55041674-55041807)
chr3 (7-100)||(40014744-40014837)
chr3 (78-134)||(26052240-26052296)
chr3 (7-70)||(26051393-26051457)
chr3 (99-130)||(1941990-1942021)
chr3 (99-130)||(3898350-3898381)
chr3 (99-130)||(4584704-4584735)
chr3 (99-130)||(12264127-12264158)
chr3 (99-130)||(20671178-20671209)
chr3 (99-130)||(21098231-21098262)
chr3 (99-130)||(24119138-24119169)
chr3 (99-130)||(26052349-26052380)
chr3 (99-130)||(26948701-26948732)
chr3 (99-130)||(31488341-31488372)
chr3 (99-130)||(34121283-34121314)
chr3 (99-130)||(38654198-38654229)
chr3 (99-130)||(43363881-43363912)
chr3 (99-130)||(49478136-49478167)
chr3 (99-130)||(49672490-49672521)
chr3 (99-130)||(55041858-55041889)
[»] chr2 (27 HSPs)
chr2 (7-138)||(41663244-41663375)
chr2 (7-138)||(41664517-41664648)
chr2 (7-138)||(6120559-6120690)
chr2 (7-138)||(18351558-18351689)
chr2 (7-134)||(19596454-19596581)
chr2 (7-138)||(44902089-44902219)
chr2 (7-138)||(20544832-20544963)
chr2 (7-134)||(36279545-36279672)
chr2 (10-134)||(999325-999449)
chr2 (7-134)||(8700272-8700399)
chr2 (7-134)||(26231350-26231477)
chr2 (7-134)||(31424020-31424147)
chr2 (7-134)||(34007800-34007927)
chr2 (7-126)||(42055216-42055335)
chr2 (7-138)||(42441967-42442102)
chr2 (7-132)||(16214837-16214962)
chr2 (7-69)||(27944887-27944949)
chr2 (7-70)||(692293-692356)
chr2 (99-130)||(19596634-19596665)
chr2 (99-130)||(6120479-6120510)
chr2 (99-130)||(16214753-16214784)
chr2 (99-130)||(18351479-18351510)
chr2 (99-130)||(26231527-26231558)
chr2 (99-130)||(31423936-31423967)
chr2 (99-130)||(34007980-34008011)
chr2 (99-130)||(41663164-41663195)
chr2 (99-130)||(42441888-42441919)
[»] chr1 (32 HSPs)
chr1 (7-138)||(2951457-2951588)
chr1 (7-138)||(4266388-4266519)
chr1 (7-138)||(34888777-34888908)
chr1 (7-138)||(38913838-38913969)
chr1 (7-138)||(50151067-50151198)
chr1 (7-128)||(1231813-1231934)
chr1 (7-134)||(7333955-7334082)
chr1 (7-133)||(23482798-23482924)
chr1 (10-134)||(39727991-39728115)
chr1 (7-134)||(35614078-35614205)
chr1 (10-134)||(9216042-9216166)
chr1 (7-134)||(35614827-35614953)
chr1 (7-133)||(18706600-18706725)
chr1 (10-134)||(18855326-18855450)
chr1 (7-134)||(19764641-19764768)
chr1 (7-134)||(38444642-38444769)
chr1 (7-134)||(52687205-52687331)
chr1 (11-134)||(2590346-2590468)
chr1 (7-134)||(19768475-19768602)
chr1 (7-70)||(31018291-31018354)
chr1 (7-70)||(50326076-50326139)
chr1 (99-130)||(1231737-1231768)
chr1 (99-130)||(2951636-2951667)
chr1 (99-130)||(4266309-4266340)
chr1 (99-130)||(18706773-18706804)
chr1 (99-130)||(19764814-19764845)
chr1 (99-130)||(19768394-19768425)
chr1 (99-130)||(23482972-23483003)
chr1 (99-130)||(35613996-35614027)
chr1 (99-130)||(35614746-35614777)
chr1 (99-130)||(38914017-38914048)
chr1 (99-130)||(52036310-52036341)
[»] scaffold0173 (1 HSPs)
scaffold0173 (7-134)||(19358-19485)
[»] scaffold0022 (2 HSPs)
scaffold0022 (7-133)||(149141-149267)
scaffold0022 (99-130)||(149318-149349)
[»] scaffold0836 (1 HSPs)
scaffold0836 (7-68)||(5369-5430)
[»] scaffold0515 (1 HSPs)
scaffold0515 (7-68)||(6152-6213)
[»] scaffold0306 (1 HSPs)
scaffold0306 (7-68)||(6162-6223)


Alignment Details
Target: scaffold0031 (Bit Score: 111; Significance: 2e-56; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 46412 - 46281
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  46412 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 46313  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  46312 cattcttttgttaaaattatatgtcaatatta 46281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 2e-56; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 15961270 - 15961139
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  15961270 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 15961171  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  15961170 cattcttttgttaaaattatatgtcaatatta 15961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 18997838 - 18997707
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  18997838 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 18997739  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  18997738 cattcttttgttaaaattatatgtcaatatta 18997707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 30473975 - 30474106
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  30473975 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 30474074  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  30474075 cattcttttgttaaaattatatgtcaatatta 30474106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 44832277 - 44832408
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  44832277 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 44832376  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  44832377 cattcttttgttaaaattatatgtcaatatta 44832408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 6299111 - 6299242
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  6299111 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 6299210  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||| ||||||||||||||||||||||||||    
T  6299211 cattcctttgttaaaattatatgtcaatatta 6299242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 10478075 - 10477944
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  10478075 aatatgtggtcacaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 10477976  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  10477975 cattcttttgttaaaattatatgtcaatatta 10477944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 32110952 - 32111083
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  32110952 aatatgtggttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 32111051  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  32111052 cattcttttgttaaaattatatgtcaatatta 32111083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 995906 - 996037
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |||||| ||||||||||||||||||||||    
T  995906 aatatgtggtcccaaatatatgcatatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaacttttatcaatcgtgtgttactt 996005  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  996006 cattcttttgttaaaattatatgtcaatatta 996037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 11725328 - 11725201
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  11725328 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 11725229  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  11725228 cattcttttgttaaaattatatgtcaat 11725201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 18175519 - 18175388
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||| ||||||| ||||||||||||    
T  18175519 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaatattaattattatcaaacgtgtgttactt 18175420  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  18175419 cattcttttgttaaaattatatgtcaatatta 18175388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 28582993 - 28582866
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  28582993 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 28582894  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  28582893 cattcttttgttaaaattatatgtcaat 28582866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 39257581 - 39257454
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  39257581 aatatgtggtcccaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 39257482  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  39257481 cattcttttgttaaaattatatgtcaat 39257454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 40026938 - 40026811
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  40026938 aatatgtggtcccaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 40026839  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  40026838 cattcttttgttaaaattatatgtcaat 40026811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 18569003 - 18568876
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |       |||||||||||||||||||||||||||||    
T  18569003 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttactt 18568904  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  18568903 cattcttttgttaaaattatatgtcaat 18568876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 19240801 - 19240674
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||| |||||||||||    
T  19240801 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacgttaaaaatattaatttttatcaatggtgtgttactt 19240702  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  19240701 cattcttttgttaaaattatatgtcaat 19240674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 19313985 - 19313858
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||||| |||||||||||    
T  19313985 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacgttaaaaatattaatttttatcaatggtgtgttactt 19313886  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  19313885 cattcttttgttaaaattatatgtcaat 19313858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 24409014 - 24408887
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  24409014 aatatgtggtcccaaatatatgcagatgttggaattcgaacatcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 24408915  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  24408914 cattcttttgttaaaattatatgtcaat 24408887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 28274305 - 28274432
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  28274305 aatatgtggtcccaaatatacgcagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 28274404  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  28274405 cattcttttgttaaaattatatgtcaat 28274432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 44837047 - 44836920
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||    
T  44837047 aatatgtggtcctaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttactt 44836948  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||| |||||    
T  44836947 cattcttttgttaaaattatatctcaat 44836920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 35122413 - 35122540
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  35122413 aatatgtggtccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 35122512  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||| ||||||||||||||||||    
T  35122513 cattcttttattaaaattatatgtcaat 35122540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 19412970 - 19412842
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||       |||||||||||||| ||||||||||||||    
T  19412970 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacagttattcaccttaaaaatattaatttttatccatcgtgtgttactt 19412871  T
Q  107 cattc-ttttgttaaaattatatgtcaat 134  Q
    ||||| |||||||||||||||||||||||    
T  19412870 cattctttttgttaaaattatatgtcaat 19412842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 24004821 - 24004945
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||       |||||||||||||||||| ||| |||||||||    
T  24004821 atgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttcat 24004920  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  24004921 tcttttgttaaaattatatgtcaat 24004945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 18842042 - 18841915
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||       ||||||||||||||||| || ||||||||    
T  18842042 aatatgtggtccaaaatatatgcagatgttggaattcgaatctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtatgttactt 18841943  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  18841942 cattcttttgttaaaattatatgtcaat 18841915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 18210715 - 18210842
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||||||||| ||    
T  18210715 aatatgtggtctcaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttattt 18210814  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    | ||||||||||||| ||||||||||||    
T  18210815 ccttcttttgttaaagttatatgtcaat 18210842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 11142605 - 11142474
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntatta------atttttatcaatcgtgtg 100  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||      ||||||||||||||||||    
T  11142605 aatatgtgctcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtg 11142506  T
Q  101 ttacttcattcttttgttaaaattatatgtca 132  Q
    ||||||||||||||||||||||||||||||||    
T  11142505 ttacttcattcttttgttaaaattatatgtca 11142474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 27 - 134
Target Start/End: Original strand, 23353688 - 23353795
Alignment:
Q  27 tgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcattcttttgttaaaattat 126  Q
    ||||||||||||||||||||||||||||||| | ||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23353688 tgcagatgttggaattcgaacctcagacaccccacttattcaccttaaaaatattaatttttatcaatggtgtgttacttcattcttttgttaaaattat 23353787  T
Q  127 atgtcaat 134  Q
    ||||||||    
T  23353788 atgtcaat 23353795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 7 - 110
Target Start/End: Complemental strand, 39997829 - 39997726
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  39997829 aatatgtggttccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacctttaaaatattaatttttatcaatcgtgtgttactt 39997730  T
Q  107 catt 110  Q
    ||||    
T  39997729 catt 39997726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 8e-22
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 25875461 - 25875517
Alignment:
Q  78 tattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25875461 tattaatttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaat 25875517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 1e-17
Query Start/End: Original strand, 85 - 134
Target Start/End: Original strand, 18481929 - 18481978
Alignment:
Q  85 ttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18481929 ttttatcaatcgtgtcttacttcattcttttgttaaaattatatgtcaat 18481978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 39997708 - 39997673
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39997708 tgttacttcattcttttgtaaaaattatatgtcaat 39997673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 996085 - 996116
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  996085 tgttacttcattcttttgtaaaaattatatgt 996116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 6299290 - 6299321
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  6299290 tgttacttcattcttttgtaaaaattatatgt 6299321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 10477896 - 10477865
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  10477896 tgttacttcattcttttgtaaaaattatatgt 10477865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 11142424 - 11142393
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  11142424 tgttacttcattcttttgtaaaaattatatgt 11142393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 11725149 - 11725118
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  11725149 tgttacttcattcttttgtaaaaattatatgt 11725118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 18175340 - 18175309
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  18175340 tgttacttcattcttttgtaaaaattatatgt 18175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 18210893 - 18210924
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  18210893 tgttacttcattcttttgtaaaaattatatgt 18210924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 18997659 - 18997628
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  18997659 tgttacttcattcttttgtaaaaattatatgt 18997628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19240623 - 19240592
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19240623 tgttacttcattcttttgtaaaaattatatgt 19240592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19313807 - 19313776
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19313807 tgttacttcattcttttgtaaaaattatatgt 19313776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19412795 - 19412764
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19412795 tgttacttcattcttttgtaaaaattatatgt 19412764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 23353846 - 23353877
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  23353846 tgttacttcattcttttgtaaaaattatatgt 23353877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 24408838 - 24408807
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  24408838 tgttacttcattcttttgtaaaaattatatgt 24408807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 30474153 - 30474184
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  30474153 tgttacttcattcttttgtaaaaattatatgt 30474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 32111131 - 32111162
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  32111131 tgttacttcattcttttgtaaaaattatatgt 32111162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 35122585 - 35122616
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  35122585 tgttacttcattcttttgtaaaaattatatgt 35122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 39257401 - 39257370
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  39257401 tgttacttcattcttttgtaaaaattatatgt 39257370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 39997623 - 39997592
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  39997623 tgttacttcattcttttgtaaaaattatatgt 39997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 44832457 - 44832488
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  44832457 tgttacttcattcttttgtaaaaattatatgt 44832488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 44836867 - 44836836
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  44836867 tgttacttcattcttttgtaaaaattatatgt 44836836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 2e-56; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 3840732 - 3840863
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  3840732 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 3840831  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  3840832 cattcttttgttaaaattatatgtcaatatta 3840863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 21804663 - 21804794
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  21804663 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 21804762  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  21804763 cattcttttgttaaaattatatgtcaatatta 21804794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 27138619 - 27138750
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  27138619 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 27138718  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  27138719 cattcttttgttaaaattatatgtcaatatta 27138750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 38163430 - 38163561
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  38163430 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 38163529  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  38163530 cattcttttgttaaaattatatgtcaatatta 38163561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 42242245 - 42242376
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  42242245 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 42242344  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  42242345 cattcttttgttaaaattatatgtcaatatta 42242376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 33917038 - 33917169
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||| ||    
T  33917038 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttattt 33917137  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  33917138 cattcttttgttaaaattatatgtcaatatta 33917169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 21341961 - 21341830
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  21341961 aatatgtagtctcaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 21341862  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  21341861 cattcttttgttaaaattatatgtcaatatta 21341830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 21656766 - 21656639
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  21656766 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 21656667  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  21656666 cattcttttgttaaaattatatgtcaat 21656639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 21670119 - 21669992
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  21670119 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 21670020  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  21670019 cattcttttgttaaaattatatgtcaat 21669992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 31373594 - 31373463
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       |||||||||||||||||||||| ||||||    
T  31373594 aatatgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtattactt 31373495  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  31373494 cattcttttgttaaaattatatgtcaatatta 31373463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 43933635 - 43933762
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  43933635 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 43933734  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  43933735 cattcttttgttaaaattatatgtcaat 43933762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 16376639 - 16376763
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  16376639 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 16376738  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  16376739 tcttttgttaaaattatatgtcaat 16376763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 17178328 - 17178460
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc-nnnnnnntattaatttttatcaatcgtgtgttact 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||        ||||||||||||||||||| ||||||||    
T  17178328 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccaaaaaaaatattaatttttatcaatcgggtgttact 17178427  T
Q  106 tcattcttttgttaaaattatatgtcaatatta 138  Q
    |||||||||||||||||||||||||||||||||    
T  17178428 tcattcttttgttaaaattatatgtcaatatta 17178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 40969026 - 40968902
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  40969026 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 40968927  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  40968926 tcttttgttaaaattatatgtcaat 40968902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 15109756 - 15109883
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |       ||||||||||||||||| |||||||||||    
T  15109756 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcatcttaaaagtattaatttttatcaattgtgtgttactt 15109855  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  15109856 cattcttttgttaaaattatatgtcaat 15109883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 24924217 - 24924090
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||       |||||| ||||||||||||||||||||||    
T  24924217 aatatgtggtcccaaatatatgtagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaaattttatcaatcgtgtgttactt 24924118  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  24924117 cattcttttgttaaaattatatgtcaat 24924090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 13786305 - 13786181
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||||| || |||||||||    
T  13786305 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgcgtcttacttcat 13786206  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    | |||||||||||||||||||||||    
T  13786205 ttttttgttaaaattatatgtcaat 13786181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 27903511 - 27903635
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||| ||||||||| |||||||||    
T  27903511 atgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttaccaatcgtgtcttacttcat 27903610  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||| |||||||||    
T  27903611 tcttttgttaaaattctatgtcaat 27903635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 21753586 - 21753710
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||| ||||||||||||||||||  ||||||||||| ||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  21753586 atgtggtctcaaatatatgcagatgttaaaattcgaaccttagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 21753685  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  21753686 tcttttgttaaaattatatgtcaat 21753710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 10 - 110
Target Start/End: Original strand, 39030346 - 39030446
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  39030346 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 39030445  T
Q  110 t 110  Q
    |    
T  39030446 t 39030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.000000000000003
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 31096748 - 31096707
Alignment:
Q  97 tgtgttacttcattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  31096748 tgtgttacttcattcttttgttaaaattatatgtcaatatta 31096707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 138
Target Start/End: Original strand, 15109930 - 15109969
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||| |||||||||||| |||||||    
T  15109930 tgttacttcattcttttgtaaaaattatatgttaatatta 15109969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 3840912 - 3840943
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  3840912 tgttacttcattcttttgtaaaaattatatgt 3840943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 16376812 - 16376847
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||| |||||| ||||||||||||||||    
T  16376812 tgttacttcattattttgtaaaaattatatgtcaat 16376847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 17178508 - 17178539
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  17178508 tgttacttcattcttttgtaaaaattatatgt 17178539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 21341780 - 21341749
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  21341780 tgttacttcattcttttgtaaaaattatatgt 21341749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 21656590 - 21656559
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  21656590 tgttacttcattcttttgtaaaaattatatgt 21656559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 21669938 - 21669907
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  21669938 tgttacttcattcttttgtaaaaattatatgt 21669907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 21804842 - 21804873
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  21804842 tgttacttcattcttttgtaaaaattatatgt 21804873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 24924041 - 24924010
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  24924041 tgttacttcattcttttgtaaaaattatatgt 24924010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 27138798 - 27138829
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  27138798 tgttacttcattcttttgtaaaaattatatgt 27138829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 31373413 - 31373382
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  31373413 tgttacttcattcttttgtaaaaattatatgt 31373382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 33917217 - 33917248
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  33917217 tgttacttcattcttttgtaaaaattatatgt 33917248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 42242424 - 42242455
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  42242424 tgttacttcattcttttgtaaaaattatatgt 42242455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 2e-56; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 12597356 - 12597487
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  12597356 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 12597455  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  12597456 cattcttttgttaaaattatatgtcaatatta 12597487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 19997803 - 19997672
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  19997803 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 19997704  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  19997703 cattcttttgttaaaattatatgtcaatatta 19997672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 28099688 - 28099819
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  28099688 aatatgtggtcccaaatatatgctgatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 28099787  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  28099788 cattcttttgttaaaattatatgtcaatatta 28099819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 33646080 - 33645949
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  33646080 aatatgtggttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 33645981  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  33645980 cattcttttgttaaaattatatgtcaatatta 33645949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 13533905 - 13533778
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  13533905 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 13533806  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  13533805 cattcttttgttaaaattatatgtcaat 13533778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 17202570 - 17202443
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  17202570 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 17202471  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  17202470 cattcttttgttaaaattatatgtcaat 17202443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 10584819 - 10584946
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||       |||||||||||||||||||||||||||||    
T  10584819 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 10584918  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  10584919 cattcttttgttaaaattatatgtcaat 10584946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 15044860 - 15044733
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||    
T  15044860 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgttttactt 15044761  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  15044760 cattcttttgttaaaattatatgtcaat 15044733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 19 - 134
Target Start/End: Complemental strand, 8539726 - 8539611
Alignment:
Q  19 caaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcattcttttgtt 118  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  8539726 caaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttacttcattcttttgtt 8539627  T
Q  119 aaaattatatgtcaat 134  Q
    ||||||||||||||||    
T  8539626 aaaattatatgtcaat 8539611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 2266914 - 2266775
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacg--------cttattcaccnnnnnnntattaatttttatcaatcgtg 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||       |||||||||||||||||||||    
T  2266914 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtg 2266815  T
Q  99 tgttacttcattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2266814 tgttacttcattcttttgttaaaattatatgtcaatatta 2266775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 2005563 - 2005439
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    ||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  2005563 atgtggtcttaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 2005464  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  2005463 tcttttgttaaaattatatgtcaat 2005439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 18 - 138
Target Start/End: Complemental strand, 25448876 - 25448756
Alignment:
Q  18 ccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcattcttttgt 117  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| ||||||    
T  25448876 ccaaatatatgtagatgttggaattcgaaactcagacaccacgcttattcaccaaaaatatattaatttttatcaatcgtgtgttacttcatttttttgt 25448777  T
Q  118 taaaattatatgtcaatatta 138  Q
    |||||||||||||||||||||    
T  25448776 taaaattatatgtcaatatta 25448756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 3593031 - 3592904
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||||||||    
T  3593031 aatatgtgatcccaaatatattcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttactt 3592932  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||| |||||    
T  3592931 cattcttttgttaaaattatatctcaat 3592904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 17594955 - 17594827
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntatt-aatttttatcaatcgtgtgttact 105  Q
    |||||||||||||||||||||| |||||||| ||||| ||| ||||||||||| ||||||||||       |||| |||||||||||||||| |||||||    
T  17594955 aatatgtggtcccaaatatatggagatgttgaaattcaaacttcagacaccacacttattcaccttaaaaatattaaatttttatcaatcgtatgttact 17594856  T
Q  106 tcattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||||||    
T  17594855 tcattcttttgttaaaattatatgtcaat 17594827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 55
Target Start/End: Complemental strand, 33035568 - 33035523
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagaca 55  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||    
T  33035568 atgtggtctcaaatatatgcagatgctggaattcgaatctcagaca 33035523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 1405654 - 1405688
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaat 41  Q
    |||||||| ||||||||||||||||||||||||||    
T  1405654 aatatgtgatcccaaatatatgcagatgttggaat 1405688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 2266727 - 2266696
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  2266727 tgttacttcattcttttgtaaaaattatatgt 2266696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 3592855 - 3592824
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  3592855 tgttacttcattcttttgtaaaaattatatgt 3592824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 8539559 - 8539528
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  8539559 tgttacttcattcttttgtaaaaattatatgt 8539528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 10584996 - 10585027
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  10584996 tgttacttcattcttttgtaaaaattatatgt 10585027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 12597535 - 12597566
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  12597535 tgttacttcattcttttgtaaaaattatatgt 12597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 15044682 - 15044651
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  15044682 tgttacttcattcttttgtaaaaattatatgt 15044651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 17202391 - 17202360
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  17202391 tgttacttcattcttttgtaaaaattatatgt 17202360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 17594776 - 17594745
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  17594776 tgttacttcattcttttgtaaaaattatatgt 17594745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19997623 - 19997592
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19997623 tgttacttcattcttttgtaaaaattatatgt 19997592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 28099868 - 28099899
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  28099868 tgttacttcattcttttgtaaaaattatatgt 28099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 33645901 - 33645870
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  33645901 tgttacttcattcttttgtaaaaattatatgt 33645870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 111; Significance: 2e-56; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 17373255 - 17373386
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  17373255 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 17373354  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  17373355 cattcttttgttaaaattatatgtcaatatta 17373386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 20874826 - 20874695
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  20874826 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 20874727  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  20874726 cattcttttgttaaaattatatgtcaatatta 20874695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 33570398 - 33570529
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  33570398 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 33570497  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  33570498 cattcttttgttaaaattatatgtcaatatta 33570529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 34107429 - 34107560
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  34107429 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 34107528  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  34107529 cattcttttgttaaaattatatgtcaatatta 34107560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 34110790 - 34110659
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  34110790 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 34110691  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  34110690 cattcttttgttaaaattatatgtcaatatta 34110659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 38246956 - 38247087
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  38246956 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 38247055  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  38247056 cattcttttgttaaaattatatgtcaatatta 38247087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 10729533 - 10729664
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||| |||||||||||||||||||||||    
T  10729533 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattattttttatcaatcgtgtgttactt 10729632  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  10729633 cattcttttgttaaaattatatgtcaatatta 10729664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 14141198 - 14141329
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  14141198 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 14141297  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||| ||||||||    
T  14141298 cattcttttgttaaaattatatgccaatatta 14141329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 16526397 - 16526528
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  16526397 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 16526496  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    | ||||||||||||||||||||||||||||||    
T  16526497 cgttcttttgttaaaattatatgtcaatatta 16526528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 100; E-Value: 7e-50
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 2399033 - 2399162
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||  |||||||||    
T  2399033 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatc--gtgttactt 2399130  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  2399131 cattcttttgttaaaattatatgtcaatatta 2399162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 27648068 - 27647941
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  27648068 aatatgtggtcccaaatatatacagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 27647969  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  27647968 cattcttttgttaaaattatatgtcaat 27647941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 29275759 - 29275635
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||| |||||||||||||||||||||||||    
T  29275759 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttacttcat 29275660  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  29275659 tcttttgttaaaattatatgtcaat 29275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 1396127 - 1396000
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||| |||||||||||||    
T  1396127 aatatgtggtcccaaatatctgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcagtcgtgtgttactt 1396028  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  1396027 cattcttttgttaaaattatatgtcaat 1396000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 94; E-Value: 3e-46
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 6940594 - 6940720
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||||| ||||||||    
T  6940594 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtatgttactt 6940693  T
Q  107 cattcttttgttaaaattatatgtcaa 133  Q
    |||||||||||||||||||||||||||    
T  6940694 cattcttttgttaaaattatatgtcaa 6940720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 20655143 - 20655267
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||| |||| |||||||||    
T  20655143 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtcttacttcat 20655242  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  20655243 tcttttgttaaaattatatgtcaat 20655267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 1394577 - 1394704
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||       |||||||||||||||||||||||||||||    
T  1394577 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacttgttcaccttaaaaatattaatttttatcaatcgtgtgttactt 1394676  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||| ||||||||||||    
T  1394677 cattcttttgttaaatttatatgtcaat 1394704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 5479334 - 5479207
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||       |||||||||||||||||||||||||||||    
T  5479334 aatatgtgatcccaaatatatgtagatgttggaattcgaacctcagacactacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 5479235  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  5479234 cattcttttgttaaaattatatgtcaat 5479207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 15 - 134
Target Start/End: Complemental strand, 33375892 - 33375773
Alignment:
Q  15 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcattcttt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||||||||||    
T  33375892 gtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcattcttt 33375793  T
Q  115 tgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||    
T  33375792 tgttaaaattatatgtcaat 33375773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 24223255 - 24223382
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||| | |||| ||||||||||||||||    
T  24223255 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattactctttaccaatcgtgtgttactt 24223354  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||| |||||||||||    
T  24223355 cattcttttgttaaaagtatatgtcaat 24223382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 25099330 - 25099454
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||       |||||||||||||||||||||| |||||||||    
T  25099330 atgtggtcacaaatatatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcat 25099429  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  25099430 tcttttgttaaaattatatgtcaat 25099454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 25158420 - 25158544
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||| ||       |||||||||||||||||||||| |||||||||    
T  25158420 atgtggtcacaaatatatgcagatgttggaattcgaacctcaggcaccacacttattcgccttaaaaatattaatttttatcaatcgtgtcttacttcat 25158519  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  25158520 tcttttgttaaaattatatgtcaat 25158544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 80; E-Value: 6e-38
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 17913876 - 17913752
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    ||||||||||||||||||| |||||||||||||||||||||| | ||||| ||||||||||       ||||||| |||||||||||||| |||||||||    
T  17913876 atgtggtcccaaatatatgtagatgttggaattcgaacctcaaataccacacttattcaccttaaaaatattaatctttatcaatcgtgtcttacttcat 17913777  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  17913776 tcttttgttaaaattatatgtcaat 17913752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 60; E-Value: 6e-26
Query Start/End: Original strand, 7 - 66
Target Start/End: Complemental strand, 40177179 - 40177120
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttatt 66  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40177179 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttatt 40177120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 1395950 - 1395919
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  1395950 tgttacttcattcttttgtaaaaattatatgt 1395919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 2399210 - 2399241
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  2399210 tgttacttcattcttttgtaaaaattatatgt 2399241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 5479158 - 5479127
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  5479158 tgttacttcattcttttgtaaaaattatatgt 5479127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 6940768 - 6940799
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  6940768 tgttacttcattcttttgtaaaaattatatgt 6940799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 10729712 - 10729743
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  10729712 tgttacttcattcttttgtaaaaattatatgt 10729743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 14141377 - 14141408
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  14141377 tgttacttcattcttttgtaaaaattatatgt 14141408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 16526577 - 16526608
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  16526577 tgttacttcattcttttgtaaaaattatatgt 16526608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 17373434 - 17373465
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  17373434 tgttacttcattcttttgtaaaaattatatgt 17373465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 20874647 - 20874616
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  20874647 tgttacttcattcttttgtaaaaattatatgt 20874616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 24223434 - 24223465
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  24223434 tgttacttcattcttttgtaaaaattatatgt 24223465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 27647888 - 27647857
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  27647888 tgttacttcattcttttgtaaaaattatatgt 27647857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 33570578 - 33570609
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  33570578 tgttacttcattcttttgtaaaaattatatgt 33570609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 34107608 - 34107639
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  34107608 tgttacttcattcttttgtaaaaattatatgt 34107639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 34110609 - 34110578
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  34110609 tgttacttcattcttttgtaaaaattatatgt 34110578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 38247135 - 38247166
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  38247135 tgttacttcattcttttgtaaaaattatatgt 38247166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 40177076 - 40177045
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  40177076 tgttacttcattcttttgtaaaaattatatgt 40177045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 111; Significance: 2e-56; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 16917979 - 16918110
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  16917979 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 16918078  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  16918079 cattcttttgttaaaattatatgtcaatatta 16918110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 31966060 - 31966191
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  31966060 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 31966159  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  31966160 cattcttttgttaaaattatatgtcaatatta 31966191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 52434762 - 52434631
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  52434762 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 52434663  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  52434662 cattcttttgttaaaattatatgtcaatatta 52434631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 53143353 - 53143484
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  53143353 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 53143452  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  53143453 cattcttttgttaaaattatatgtcaatatta 53143484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 30825013 - 30825144
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  30825013 aatatgtggttccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 30825112  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  30825113 cattcttttgttaaaattatatgtcaatatta 30825144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 37651804 - 37651673
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||    
T  37651804 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 37651705  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  37651704 cattcttttgttaaaattatatgtcaatatta 37651673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 16905043 - 16905170
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||| |||||||||||    
T  16905043 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttactt 16905142  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  16905143 cattcttttgttaaaattatatgtcaat 16905170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 12090550 - 12090682
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |       |||||||||||||||||||||||||||||    
T  12090550 aatatgtggtcccaaatatatgtagatgttggaattcgaacctcagacaccacgcttattcaaccaaaaaatattaatttttatcaatcgtgtgttactt 12090649  T
Q  107 ca-ttcttttgttaaaattatatgtcaatatta 138  Q
    || ||||||||||||||||||||||||||||||    
T  12090650 catttcttttgttaaaattatatgtcaatatta 12090682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 35760719 - 35760592
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||  |||||||||       |||||||||||||||||||||||||||||    
T  35760719 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacaattattcaccttaaaaatattaatttttatcaatcgtgtgttactt 35760620  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  35760619 cattcttttgttaaaattatatgtcaat 35760592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 45977081 - 45977208
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||       ||||||||||||||||| |||||||||||    
T  45977081 aatatgtggtcctaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttactt 45977180  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  45977181 cattcttttgttaaaattatatgtcaat 45977208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 44376173 - 44376297
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  44376173 atgtggtcacaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 44376272  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  44376273 tcttttgttaaaattatatgtcaat 44376297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 33139562 - 33139689
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||       |||||||||||||||||||||| ||||||    
T  33139562 aatatgttgtcccaaatatatgcagatgttggaattcgaacctcagacaccacatttattcaccttaaaaatattaatttttatcaatcgtgtattactt 33139661  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  33139662 cattcttttgttaaaattatatgtcaat 33139689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 45782520 - 45782647
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  45782520 aatatgtggtcctaaatatatgaagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 45782619  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  45782620 cattcttttgttaaaattatatgtcaat 45782647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 46256172 - 46256045
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||| | ||||||    
T  46256172 aatatgtggtcccaaatatatgcagatgttggaattggaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtatcttactt 46256073  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  46256072 cattcttttgttaaaattatatgtcaat 46256045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 48118622 - 48118749
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||       |||||||||||| ||||||||||||||||    
T  48118622 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacacgtattcaccttaaaaatattaatttttaccaatcgtgtgttactt 48118721  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  48118722 cattcttttgttaaaattatatgtcaat 48118749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 37590898 - 37591022
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||       |||||||||||||||||| ||| |||||||||    
T  37590898 atgtggtcccaaatatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtcttacttcat 37590997  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  37590998 tcttttgttaaaattatatgtcaat 37591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 31628578 - 31628705
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |       ||||| |||||||||||||||||||||||    
T  31628578 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcatacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttactt 31628677  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  31628678 cattcttttgttaaaattatatgtcaat 31628705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 39058448 - 39058575
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| ||||| ||||||||||       |||||||||||||||||| ||||||||||    
T  39058448 aatatgtggtcccaaatatatcaagatgttggaattcgaacctcagataccacacttattcaccttaaaaatattaatttttatcaatcatgtgttactt 39058547  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  39058548 cattcttttgttaaaattatatgtcaat 39058575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 41387261 - 41387137
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||       |||||||||||||| ||||||| |||||||||    
T  41387261 atgtggtcccaaatatatgcagatgctgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcgatcgtgtcttacttcat 41387162  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  41387161 tcttttgttaaaattatatgtcaat 41387137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 52098281 - 52098409
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntatt-aatttttatcaatcgtgtgttact 105  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| || ||||||||||       |||| ||||||||||||||||||||||||    
T  52098281 aatatgtggtcccaaatatatgcagatgttggaattcaaacttcagacacaacacttattcaccttaaaaatattaaatttttatcaatcgtgtgttact 52098380  T
Q  106 tcattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||||||    
T  52098381 tcattcttttgttaaaattatatgtcaat 52098409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 4e-39
Query Start/End: Original strand, 8 - 134
Target Start/End: Original strand, 47142892 - 47143018
Alignment:
Q  8 atatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttc 107  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||||||       |||||||||||||| || ||||||||||||    
T  47142892 atatgtggtctcaaatatatgcagatgttagaattcgaacctcagacaccatgcttattcaccttaaaaatattaatttttatcgattgtgtgttacttc 47142991  T
Q  108 attcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||| |||||    
T  47142992 attcttttgttaaaattatatctcaat 47143018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 50229800 - 50229925
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaa-tttttatcaatcgtgtgttacttca 108  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  ||||||||||       |||||| ||||||||||| |||||||||||||    
T  50229800 atgtggtccaaaatatatgcagatgttggaattcgaacctcagacaccatacttattcaccttaaaaatattaattttttatcaatagtgtgttacttca 50229899  T
Q  109 ttcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||    
T  50229900 ttcttttgttaaaattatatgtcaat 50229925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 72; E-Value: 4e-33
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 54625088 - 54624968
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||      ||||||||    
T  54625088 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatca------tgttactt 54624995  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||| ||||||||||||||||||||||    
T  54624994 cattc-tttgttaaaattatatgtcaat 54624968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 34684603 - 34684650
Alignment:
Q  23 tatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 70  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||    
T  34684603 tatatgcagaggttggaattcgaacctcagacaccccacttattcacc 34684650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 12090730 - 12090761
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  12090730 tgttacttcattcttttgtaaaaattatatgt 12090761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 16905218 - 16905249
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  16905218 tgttacttcattcttttgtaaaaattatatgt 16905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 16918158 - 16918189
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  16918158 tgttacttcattcttttgtaaaaattatatgt 16918189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 30825192 - 30825223
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  30825192 tgttacttcattcttttgtaaaaattatatgt 30825223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 31966239 - 31966270
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  31966239 tgttacttcattcttttgtaaaaattatatgt 31966270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 39058622 - 39058653
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  39058622 tgttacttcattcttttgtaaaaattatatgt 39058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 45782697 - 45782728
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  45782697 tgttacttcattcttttgtaaaaattatatgt 45782728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 45977264 - 45977295
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  45977264 tgttacttcattcttttgtaaaaattatatgt 45977295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 47143070 - 47143101
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  47143070 tgttacttcattcttttgtaaaaattatatgt 47143101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 48118802 - 48118833
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  48118802 tgttacttcattcttttgtaaaaattatatgt 48118833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 52098460 - 52098491
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  52098460 tgttacttcattcttttgtaaaaattatatgt 52098491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 52434583 - 52434552
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  52434583 tgttacttcattcttttgtaaaaattatatgt 52434552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 53143534 - 53143565
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  53143534 tgttacttcattcttttgtaaaaattatatgt 53143565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 54624922 - 54624891
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  54624922 tgttacttcattcttttgtaaaaattatatgt 54624891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 111; Significance: 2e-56; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 12264338 - 12264207
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  12264338 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 12264239  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  12264238 cattcttttgttaaaattatatgtcaatatta 12264207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 21098442 - 21098311
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  21098442 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 21098343  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  21098342 cattcttttgttaaaattatatgtcaatatta 21098311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 38654018 - 38654149
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  38654018 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 38654117  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  38654118 cattcttttgttaaaattatatgtcaatatta 38654149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 43363702 - 43363833
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  43363702 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 43363801  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  43363802 cattcttttgttaaaattatatgtcaatatta 43363833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 49672700 - 49672569
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  49672700 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 49672601  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  49672600 cattcttttgttaaaattatatgtcaatatta 49672569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 54073165 - 54073034
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  54073165 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 54073066  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  54073065 cattcttttgttaaaattatatgtcaatatta 54073034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 1941811 - 1941942
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||||||    
T  1941811 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacatcacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 1941910  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  1941911 cattcttttgttaaaattatatgtcaatatta 1941942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 3898560 - 3898429
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  3898560 aatatgtggtcccaaatatatgcagatgttggaatttgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 3898461  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  3898460 cattcttttgttaaaattatatgtcaatatta 3898429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 34121493 - 34121362
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  34121493 aatacgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 34121394  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  34121393 cattcttttgttaaaattatatgtcaatatta 34121362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 49506440 - 49506571
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||| |||||    
T  49506440 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtactt 49506539  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  49506540 cattcttttgttaaaattatatgtcaatatta 49506571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 20671387 - 20671260
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  20671387 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 20671288  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  20671287 cattcttttgttaaaattatatgtcaat 20671260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 26948936 - 26948809
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||| ||||||||||||||||||||||    
T  26948936 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaacttttatcaatcgtgtgttactt 26948837  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  26948836 cattcttttgttaaaattatatgtcaat 26948809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 36076545 - 36076672
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  36076545 aatatgtggtcccaaatatatgcagatgttggaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 36076644  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  36076645 cattcttttgttaaaattatatgtcaat 36076672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 39146578 - 39146451
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||    
T  39146578 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttactt 39146479  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  39146478 cattcttttgttaaaattatatgtcaat 39146451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 4584525 - 4584652
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||    
T  4584525 aatatgtggtcccaaatatatgcagatgttggaatttgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttactt 4584624  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  4584625 cattcttttgttaaaattatatgtcaat 4584652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 24119345 - 24119218
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  24119345 aatatatggtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 24119246  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  24119245 cattcttttgttaaaattatatgtcaat 24119218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 31488549 - 31488422
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  31488549 aatatgttgtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 31488450  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
     |||||||||||||||||||||||||||    
T  31488449 tattcttttgttaaaattatatgtcaat 31488422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 45557975 - 45558106
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||    
T  45557975 aatatgtggtcccaagtatatgcagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtattactt 45558074  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  45558075 cattcttttgttaaaattatatgtcaatatta 45558106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 49478346 - 49478219
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  49478346 aatatgtggtcccaaatatatgcaaatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 49478247  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||| ||||||||||||||||||    
T  49478246 cattcttttattaaaattatatgtcaat 49478219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 74; E-Value: 2e-34
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 55041674 - 55041807
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntatta------atttttatcaatcgtgtg 100  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||       |||||      ||||||||||||||||||    
T  55041674 aatatgtggttccaaatatatgcagatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatttttatcaatcgtgtg 55041773  T
Q  101 ttacttcattcttttgttaaaattatatgtcaat 134  Q
    |||||||| |||||||||||||||||||||||||    
T  55041774 ttacttcactcttttgttaaaattatatgtcaat 55041807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 7 - 100
Target Start/End: Original strand, 40014744 - 40014837
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  40014744 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtg 40014837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 3e-24
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 26052240 - 26052296
Alignment:
Q  78 tattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26052240 tattaatttttatcaatcgtgtgttacttcattcttttgttaaaattatatgtcaat 26052296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 2e-19
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 26051393 - 26051457
Alignment:
Q  7 aatatgtggtccc-aaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 70  Q
    ||||||||||||| |||||||||| || |||||||||||||||||||||||||||||||||||||    
T  26051393 aatatgtggtccccaaatatatgctgaggttggaattcgaacctcagacaccacgcttattcacc 26051457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 1941990 - 1942021
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  1941990 tgttacttcattcttttgtaaaaattatatgt 1942021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 3898381 - 3898350
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  3898381 tgttacttcattcttttgtaaaaattatatgt 3898350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 4584704 - 4584735
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  4584704 tgttacttcattcttttgtaaaaattatatgt 4584735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 12264158 - 12264127
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  12264158 tgttacttcattcttttgtaaaaattatatgt 12264127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 20671209 - 20671178
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  20671209 tgttacttcattcttttgtaaaaattatatgt 20671178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 21098262 - 21098231
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  21098262 tgttacttcattcttttgtaaaaattatatgt 21098231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 24119169 - 24119138
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  24119169 tgttacttcattcttttgtaaaaattatatgt 24119138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 26052349 - 26052380
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  26052349 tgttacttcattcttttgtaaaaattatatgt 26052380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 26948732 - 26948701
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  26948732 tgttacttcattcttttgtaaaaattatatgt 26948701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 31488372 - 31488341
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  31488372 tgttacttcattcttttgtaaaaattatatgt 31488341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 34121314 - 34121283
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  34121314 tgttacttcattcttttgtaaaaattatatgt 34121283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 38654198 - 38654229
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  38654198 tgttacttcattcttttgtaaaaattatatgt 38654229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 43363881 - 43363912
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  43363881 tgttacttcattcttttgtaaaaattatatgt 43363912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 49478167 - 49478136
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  49478167 tgttacttcattcttttgtaaaaattatatgt 49478136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 49672521 - 49672490
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  49672521 tgttacttcattcttttgtaaaaattatatgt 49672490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 55041858 - 55041889
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  55041858 tgttacttcattcttttgtaaaaattatatgt 55041889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 111; Significance: 2e-56; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 41663375 - 41663244
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  41663375 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 41663276  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  41663275 cattcttttgttaaaattatatgtcaatatta 41663244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 41664648 - 41664517
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  41664648 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 41664549  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  41664548 cattcttttgttaaaattatatgtcaatatta 41664517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 6120690 - 6120559
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  6120690 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 6120591  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    |||||||||||||||| |||||||||||||||    
T  6120590 cattcttttgttaaaactatatgtcaatatta 6120559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 107; E-Value: 5e-54
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 18351689 - 18351558
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||       |||||||||||||||||||||||||||||    
T  18351689 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 18351590  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  18351589 cattcttttgttaaaattatatgtcaatatta 18351558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 19596454 - 19596581
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||||    
T  19596454 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccttaaaaatattaatttttatcaattgtgtgttactt 19596553  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  19596554 cattcttttgttaaaattatatgtcaat 19596581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 44902219 - 44902089
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        || ||||||||||||||||||||||||||    
T  44902219 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacaaaaaaaata-taatttttatcaatcgtgtgttactt 44902121  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  44902120 cattcttttgttaaaattatatgtcaatatta 44902089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 20544963 - 20544832
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||       ||||||||||||||||||||||| |||||    
T  20544963 aatatgtggtcccaaatatatgcagatgttagaattcgaacctaaaacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtggtactt 20544864  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  20544863 cattcttttgttaaaattatatgtcaatatta 20544832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 36279545 - 36279672
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||||       |||||||||||||||||||||||||||||    
T  36279545 aatatgtggtcccaaatatatgcagatgttggaattcgaatctcagataccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 36279644  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  36279645 cattcttttgttaaaattatatgtcaat 36279672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 999325 - 999449
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  999325 atgtggtcccaaatatatgtagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 999424  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  999425 tcttttgttaaaattatatgtcaat 999449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 8700399 - 8700272
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||  || ||||||       |||||||||||||||||||||||||||||    
T  8700399 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacattttttcaccttaaaaatattaatttttatcaatcgtgtgttactt 8700300  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  8700299 cattcttttgttaaaattatatgtcaat 8700272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 26231350 - 26231477
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||| |       |||||||||||||||||||||||||||||    
T  26231350 aatatgtggtctcaaatatattcagatgttggaattcgaacctcagacaccacacttattcatcttaaaaatattaatttttatcaatcgtgtgttactt 26231449  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  26231450 cattcttttgttaaaattatatgtcaat 26231477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 31424147 - 31424020
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||       ||||||||||||||||| |||||||||||    
T  31424147 aatatgtggtcccaaatatatgtagatgttggaattcgaacctcatacaccacacttattcaccttaaaaatattaatttttatcaattgtgtgttactt 31424048  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  31424047 cattcttttgttaaaattatatgtcaat 31424020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 87; E-Value: 4e-42
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 34007800 - 34007927
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||       ||||||||||||| |||||||||||||||    
T  34007800 aatatgtagtcccaaatatatgccgatgttggaattcgaacctcagacaccacacttatccaccttaaaaatattaatttttataaatcgtgtgttactt 34007899  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  34007900 cattcttttgttaaaattatatgtcaat 34007927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 42055335 - 42055216
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  42055335 aataggtgatcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 42055236  T
Q  107 cattcttttgttaaaattat 126  Q
    |||||||||||||| |||||    
T  42055235 cattcttttgttaagattat 42055216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 42442102 - 42441967
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaa------cctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtg 100  Q
    ||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||       ||||||||||||||||||||||     
T  42442102 aatatgtggtcccaaatatatgcagatgttggaattcgaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgt- 42442004  T
Q  101 ttacttcattcttttgttaaaattatatgtcaatatta 138  Q
     |||||||||||||||||||||||||||||||||||||    
T  42442003 -tacttcattcttttgttaaaattatatgtcaatatta 42441967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 77; E-Value: 4e-36
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 16214962 - 16214837
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| ||||||||||| |||| ||||||||||||||  ||||||| ||||||||||       ||||||||||||| |||||||||||||||    
T  16214962 aatatgtggtccaaaatatatgcaaatgtaggaattcgaacctctaacaccacacttattcaccttaaaaatattaatttttattaatcgtgtgttactt 16214863  T
Q  107 cattcttttgttaaaattatatgtca 132  Q
    ||||||||||||||||||||||||||    
T  16214862 cattcttttgttaaaattatatgtca 16214837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 9e-28
Query Start/End: Original strand, 7 - 69
Target Start/End: Original strand, 27944887 - 27944949
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 69  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27944887 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcac 27944949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 1e-23
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 692293 - 692356
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 70  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  692293 aatatatggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcacc 692356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 19596634 - 19596665
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||||||||||||||||    
T  19596634 tgttacttcattcttttgttaaaattatatgt 19596665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 6120510 - 6120479
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  6120510 tgttacttcattcttttgtaaaaattatatgt 6120479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 16214784 - 16214753
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  16214784 tgttacttcattcttttgtaaaaattatatgt 16214753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 18351510 - 18351479
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  18351510 tgttacttcattcttttgtaaaaattatatgt 18351479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 26231527 - 26231558
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  26231527 tgttacttcattcttttgtaaaaattatatgt 26231558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 31423967 - 31423936
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  31423967 tgttacttcattcttttgtaaaaattatatgt 31423936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 34007980 - 34008011
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  34007980 tgttacttcattcttttgtaaaaattatatgt 34008011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 41663195 - 41663164
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  41663195 tgttacttcattcttttgtaaaaattatatgt 41663164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 42441919 - 42441888
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  42441919 tgttacttcattcttttgtaaaaattatatgt 42441888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 2e-56; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 2951457 - 2951588
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  2951457 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 2951556  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  2951557 cattcttttgttaaaattatatgtcaatatta 2951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 4266519 - 4266388
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  4266519 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 4266420  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  4266419 cattcttttgttaaaattatatgtcaatatta 4266388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 34888777 - 34888908
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  34888777 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 34888876  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  34888877 cattcttttgttaaaattatatgtcaatatta 34888908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Original strand, 38913838 - 38913969
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  38913838 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 38913937  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  38913938 cattcttttgttaaaattatatgtcaatatta 38913969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 2e-56
Query Start/End: Original strand, 7 - 138
Target Start/End: Complemental strand, 50151198 - 50151067
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  50151198 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 50151099  T
Q  107 cattcttttgttaaaattatatgtcaatatta 138  Q
    ||||||||||||||||||||||||||||||||    
T  50151098 cattcttttgttaaaattatatgtcaatatta 50151067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 7 - 128
Target Start/End: Complemental strand, 1231934 - 1231813
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||    
T  1231934 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccaaaaaaatattaatttttatcaatcgtgtgttactt 1231835  T
Q  107 cattcttttgttaaaattatat 128  Q
    ||||||||||||||||||||||    
T  1231834 cattcttttgttaaaattatat 1231813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 7334082 - 7333955
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  7334082 aatatgtggtcccaaatatatgcagatgttggaattcaaacctcagacaccacacttattcaccataaaaatattaatttttatcaatcgtgtgttactt 7333983  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  7333982 cattcttttgttaaaattatatgtcaat 7333955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 98; E-Value: 1e-48
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 23482798 - 23482924
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  23482798 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttactt 23482897  T
Q  107 cattcttttgttaaaattatatgtcaa 133  Q
    |||||||||||||||||||||||||||    
T  23482898 cattcttttgttaaaattatatgtcaa 23482924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 96; E-Value: 2e-47
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 39728115 - 39727991
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| |||||||||    
T  39728115 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcat 39728016  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  39728015 tcttttgttaaaattatatgtcaat 39727991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 95; E-Value: 7e-47
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 35614205 - 35614078
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  35614205 aatatgtggtcccaaatatatgcagatgttggaattcgaacttaagacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgttactt 35614106  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  35614105 cattcttttgttaaaattatatgtcaat 35614078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 4e-45
Query Start/End: Original strand, 10 - 134
Target Start/End: Complemental strand, 9216166 - 9216042
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||       |||||||||||||||||||||| |||||||||    
T  9216166 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttatttaccttaaaaatattaatttttatcaatcgtgtcttacttcat 9216067  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  9216066 tcttttgttaaaattatatgtcaat 9216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 35614953 - 35614827
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||       |||||||||||||||||||||||||||||    
T  35614953 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcagacaccacacttatttaccttaaaa-tattaatttttatcaatcgtgtgttactt 35614855  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  35614854 cattcttttgttaaaattatatgtcaat 35614827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 86; E-Value: 2e-41
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 18706600 - 18706725
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||||| ||||||||||       |||||||||||||||||||||||| ||||    
T  18706600 aatatgtggtcc-aaatatatgcagatgttggaattcgaacctcatacaccacacttattcacctgaaaaatattaatttttatcaatcgtgtgtaactt 18706698  T
Q  107 cattcttttgttaaaattatatgtcaa 133  Q
    |||||||||||||||||||||||||||    
T  18706699 cattcttttgttaaaattatatgtcaa 18706725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 10 - 134
Target Start/End: Original strand, 18855326 - 18855450
Alignment:
Q  10 atgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcat 109  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||       |||||||||||||||||| ||| |||||||||    
T  18855326 atgtggtcccaaatatatgtagatgttgaaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcatgtattacttcat 18855425  T
Q  110 tcttttgttaaaattatatgtcaat 134  Q
    |||||||||||||||||||||||||    
T  18855426 tcttttgttaaaattatatgtcaat 18855450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 19764641 - 19764768
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||       ||||||||||||| |||||||||||||||    
T  19764641 aatatgtggtcccaaatatatgcaaatgtttgaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatgaatcgtgtgttactt 19764740  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||| |||||||||||||| ||||||||    
T  19764741 cattattttgttaaaattacatgtcaat 19764768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 38444769 - 38444642
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||       |||||||||||||||||  ||||||||||    
T  38444769 aatatgtggtcccaaatatatgcagatgttgaaattcgaacttcagacaccacacttattcaccttaaaaatattaatttttatcaataatgtgttactt 38444670  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||||||||| |||||||||||||||||    
T  38444669 cattcttttgataaaattatatgtcaat 38444642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 83; E-Value: 1e-39
Query Start/End: Original strand, 7 - 134
Target Start/End: Original strand, 52687205 - 52687331
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||| ||||||||||       |||||||||||||||||||||||||||||    
T  52687205 aatatgtggtcccaaatatatgcagatgttggaatccgaacctca-acaccacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 52687303  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    |||| |||| ||||||||||||||||||    
T  52687304 catttttttattaaaattatatgtcaat 52687331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 3e-37
Query Start/End: Original strand, 11 - 134
Target Start/End: Complemental strand, 2590468 - 2590346
Alignment:
Q  11 tgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttacttcatt 110  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||||||    
T  2590468 tgtggttccaaatatatgcagatgttcgaattc-aacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttacttcatt 2590370  T
Q  111 cttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||    
T  2590369 cttttgttaaaattatatgtcaat 2590346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 6e-35
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 19768602 - 19768475
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    |||||||||| ||||||| ||| |||||||| | ||||||||||||||||||| |||||||| |       ||||| |||||||||||||||||||||||    
T  19768602 aatatgtggttccaaatacatgtagatgttgaatttcgaacctcagacaccacacttattcatcttaaaaatattattttttatcaatcgtgtgttactt 19768503  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  19768502 cattcttttgttaaaattatatgtcaat 19768475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 31018291 - 31018354
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31018291 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 31018354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 64; E-Value: 2e-28
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 50326139 - 50326076
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 70  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50326139 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcacc 50326076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 1231768 - 1231737
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  1231768 tgttacttcattcttttgtaaaaattatatgt 1231737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 2951636 - 2951667
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  2951636 tgttacttcattcttttgtaaaaattatatgt 2951667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 4266340 - 4266309
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  4266340 tgttacttcattcttttgtaaaaattatatgt 4266309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 18706773 - 18706804
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  18706773 tgttacttcattcttttgtaaaaattatatgt 18706804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 19764814 - 19764845
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19764814 tgttacttcattcttttgtaaaaattatatgt 19764845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 19768425 - 19768394
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  19768425 tgttacttcattcttttgtaaaaattatatgt 19768394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 23482972 - 23483003
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  23482972 tgttacttcattcttttgtaaaaattatatgt 23483003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 35614027 - 35613996
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  35614027 tgttacttcattcttttgtaaaaattatatgt 35613996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Complemental strand, 35614777 - 35614746
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  35614777 tgttacttcattcttttgtaaaaattatatgt 35614746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 38914017 - 38914048
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  38914017 tgttacttcattcttttgtaaaaattatatgt 38914048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 52036310 - 52036341
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  52036310 tgttacttcattcttttgtaaaaattatatgt 52036341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0173 (Bit Score: 99; Significance: 3e-49; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 99; E-Value: 3e-49
Query Start/End: Original strand, 7 - 134
Target Start/End: Complemental strand, 19485 - 19358
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||       |||||||||||||||||||||| ||||||    
T  19485 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacacttattcaccttaaaaatattaatttttatcaatcgtgtcttactt 19386  T
Q  107 cattcttttgttaaaattatatgtcaat 134  Q
    ||||||||||||||||||||||||||||    
T  19385 cattcttttgttaaaattatatgtcaat 19358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 90; Significance: 7e-44; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 90; E-Value: 7e-44
Query Start/End: Original strand, 7 - 133
Target Start/End: Original strand, 149141 - 149267
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattcaccnnnnnnntattaatttttatcaatcgtgtgttactt 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||       |||||||||||||||||||||||||||||    
T  149141 aatatgtggtcccaaatatatgcagatgttggaattcgaacatcaaacacaacacttattcaccttaaaaatattaatttttatcaatcgtgtgttactt 149240  T
Q  107 cattcttttgttaaaattatatgtcaa 133  Q
    |||||||||||||||||||||||||||    
T  149241 cattcttttgttaaaattatatgtcaa 149267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 28; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 130
Target Start/End: Original strand, 149318 - 149349
Alignment:
Q  99 tgttacttcattcttttgttaaaattatatgt 130  Q
    ||||||||||||||||||| ||||||||||||    
T  149318 tgttacttcattcttttgtaaaaattatatgt 149349  T

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Target: scaffold0836 (Bit Score: 62; Significance: 4e-27; HSPs: 1)
Name: scaffold0836
Description:

Target: scaffold0836; HSP #1
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 5369 - 5430
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 68  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5369 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 5430  T

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Target: scaffold0515 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0515
Description:

Target: scaffold0515; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 6152 - 6213
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 68  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6152 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattca 6213  T

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Target: scaffold0306 (Bit Score: 50; Significance: 5e-20; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 50; E-Value: 5e-20
Query Start/End: Original strand, 7 - 68
Target Start/End: Original strand, 6162 - 6223
Alignment:
Q  7 aatatgtggtcccaaatatatgcagatgttggaattcgaacctcagacaccacgcttattca 68  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  6162 aatatgtggtctcaaatatatgcagatgttggaattcgaacctcaaacaccacacttattca 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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