View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4852_high_4 (Length: 442)
Name: NF4852_high_4
Description: NF4852
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4852_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 409; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 409; E-Value: 0
Query Start/End: Original strand, 10 - 426
Target Start/End: Original strand, 38928349 - 38928765
Alignment:
| Q |
10 |
catcatcatctttccaaattaaattaacatcacacagcagtgatttccatttccattctatacaatagtattaaaaaagacatgacattataaatactaa |
109 |
Q |
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| T |
38928349 |
catcatcatctttccaaattaaattaacatcacacagtagtgatttccatttccattctatacaatagtattaaaaaagacatgacattataaatactaa |
38928448 |
T |
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| Q |
110 |
tacagatttaggagcaagcatgattagccaaggagaaatgtttggcttgagaagcagcagcaacctcagaaacaaaaccttgcatcaccaaagtcttaac |
209 |
Q |
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| T |
38928449 |
tacagatttaggagcaagcatgattagccaaggagaaatgtttggcttgagaagcagcagcaacctcagaaacaaaaccttgcatcaccaaagtcttaac |
38928548 |
T |
|
| Q |
210 |
ctgccatggcttataaggaaaaccttgtcttgcatacgagtttatcaatgctgttgttccttctttcaacaatgctccaaaggggttatctacttcatca |
309 |
Q |
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| T |
38928549 |
ctgccatggcttataaggaaaaccttgtcttgcatacgagtttatcaatgctgttgttccttctttcaacaatgctccaaaggggttatctacttcatca |
38928648 |
T |
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| Q |
310 |
ttcctagtcgttgcttcgagcaacgttagatctgatctgtaccgtttataaactctccatccaaacacattggatactgttgatgtctccggtaccatcc |
409 |
Q |
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| T |
38928649 |
ttcctagtcgttgcttcgagcaatgttagatctgatctgtaccgtttataaactctccatccaaacacattggatactgttgatgtctccggtaccatcc |
38928748 |
T |
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| Q |
410 |
ttggccatgtctctttt |
426 |
Q |
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| T |
38928749 |
ttggccatgtctctttt |
38928765 |
T |
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