View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4853_low_1 (Length: 509)

Name: NF4853_low_1
Description: NF4853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4853_low_1
NF4853_low_1
[»] chr6 (11 HSPs)
chr6 (10-509)||(6462215-6462714)
chr6 (10-501)||(6495958-6496449)
chr6 (10-360)||(6473586-6473936)
chr6 (10-285)||(6464618-6464893)
chr6 (31-325)||(6504783-6505080)
chr6 (10-280)||(6525656-6525926)
chr6 (55-220)||(6521256-6521421)
chr6 (77-367)||(6456725-6457015)
chr6 (117-318)||(6527585-6527786)
chr6 (31-205)||(6516811-6516985)
chr6 (128-214)||(1842443-1842529)
[»] chr7 (4 HSPs)
chr7 (164-280)||(46382859-46382975)
chr7 (39-99)||(3754632-3754692)
chr7 (10-103)||(4045517-4045610)
chr7 (24-169)||(9666042-9666187)
[»] chr4 (1 HSPs)
chr4 (24-169)||(13537066-13537211)
[»] chr1 (1 HSPs)
chr1 (237-318)||(35244581-35244662)


Alignment Details
Target: chr6 (Bit Score: 468; Significance: 0; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 10 - 509
Target Start/End: Complemental strand, 6462714 - 6462215
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6462714 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 6462615  T
Q  110 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 209  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6462614 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 6462515  T
Q  210 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttg 309  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6462514 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccatgatcctgttctcttttg 6462415  T
Q  310 taaactcttctgcatatagtttatctccttcttttatatgccaccacatttgagctgctttaattccaaaagctcttagtgtcgatccattgataaaaag 409  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  6462414 taaactcttctgcatatagtttatctccttcttttatatgccaccacatttgagctgctttaattccaaaagctaatagtgtcgatccattgataaaaag 6462315  T
Q  410 gtctgcgtcgttatattccatacccatcagtgctgctgaagaatatgcttttgcagcttggcttgtgctcttatggtttcttccatctttattttgaatt 509  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  6462314 gtctgcgtcgttatatgccaaacccatcagtgctgctgaataatatgcatttgcagcttggcttgtgctcttatggtttcttccatctttatgttgaatt 6462215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 352; E-Value: 0
Query Start/End: Original strand, 10 - 501
Target Start/End: Original strand, 6495958 - 6496449
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6495958 catcatcaaatccttttaaatttcttatattcttcaatgcattttccttatcataaattccttgtaaggcatatacaaaccctttccatccttcttcaac 6496057  T
Q  110 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 209  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  6496058 accatctcttttcaaagcaggcaatgcccattcaacaagttgcttcacatattcgacatcagagaacaatacttcagaaataggaagcaatggtaagagc 6496157  T
Q  210 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttg 309  Q
    |||| |||||  ||||||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||| ||||||    
T  6496158 tgaactccaaccctacattctttatattccggtggagcaaaccaaagtccactttctctcttgttggaccatagaaatcccatgatccgattcgcttttg 6496257  T
Q  310 taaactcttctgcatatagtttatctccttcttttatatgccaccacatttgagctgctttaattccaaaagctcttagtgtcgatccattgataaaaag 409  Q
    |||| ||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| |||   ||||||||||||  |||||||||    
T  6496258 taaattcttcggcatatagttttcctccttcttttatatgccaccacatttgagccgctttaattccaaaggctaaaagtgtcgatccaaggataaaaag 6496357  T
Q  410 gtctgcgtcgttatattccatacccatcagtgctgctgaagaatatgcttttgcagcttggcttgtgctcttatggtttcttccatctttat 501  Q
    |||||||||||| ||  ||| |||||||| |||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||||||||||    
T  6496358 gtctgcgtcgttgtacgccaaacccatcaatgctgccgaataatatgcatttgcagcttgacttgtgctcttatggtttcttccatctttat 6496449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 10 - 360
Target Start/End: Complemental strand, 6473936 - 6473586
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 109  Q
    ||||||||||||  || ||| || |||||||||||||| || |||| ||||||||||||||||| || ||||| ||||| ||||||||||||||||||||    
T  6473936 catcatcaaatctattcaaactttttatattcttcaatccactttcattatcataaattccttgcaatgcatagacaaaacctttccatccttcttcaac 6473837  T
Q  110 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 209  Q
    ||| || || || |||||| |||||||||| || ||||||| ||||||||| |||||||| || ||||| |||||||||||||||| |||||||| ||||    
T  6473836 accttccctatttaaagcaagcaatgtccactccacaagttccttcacataatcaacatctgaaaacaaaacttcagaaataggaatcaatggtaggagc 6473737  T
Q  210 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttg 309  Q
    ||||||||||| ||||||||| |  || |||  ||||||||||| | |||||| |||||||||||||||||||||| |||||| ||||| ||||||||||    
T  6473736 tgaattccaagcctacattctttccatgcagccggagcaaaccataatccactgtctctcttgttagaccatagaactcccatcatcctattctcttttg 6473637  T
Q  310 taaactcttctgcatatagtttatctccttcttttatatgccaccacattt 360  Q
    |||| |||||  |||| || || ||||||||||||| ||||||||||||||    
T  6473636 taaaatcttcctcatagagattctctccttcttttacatgccaccacattt 6473586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 6464618 - 6464893
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 109  Q
    |||||||||| || || ||  ||||||| ||||||||| || |||| |||||||||| |||||  || ||||| ||||||||||||||||||||| ||||    
T  6464618 catcatcaaaaccattcaagcttcttatcttcttcaatccactttcattatcataaactccttccaaggcatagacaaaccctttccatccttctccaac 6464717  T
Q  110 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 209  Q
    ||| || || |||||||||||||||||||| || ||||||| ||||||| | |||||||  || || || | ||||||||| |||| |||||||||||||    
T  6464718 accttccctattcaaagcaggcaatgtccactccacaagttccttcacaaaatcaacatttgaaaataagaattcagaaattggaagcaatggtaagagc 6464817  T
Q  210 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaa 285  Q
    ||||| ||||| ||||||||| |  ||||||| ||||||||||| | |||||| ||||||||||||| ||| ||||    
T  6464818 tgaatcccaagcctacattctttccattcaggaggagcaaaccataatccactgtctctcttgttagcccaaagaa 6464893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 31 - 325
Target Start/End: Original strand, 6504783 - 6505080
Alignment:
Q  31 ttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaacaccatct---cttttcaaagc 127  Q
    ||||||| |||||||||||| |||| ||||||||||||||||  || | |||||  || || |||||||||||| |||||||| ||   || ||||||||    
T  6504783 ttcttatcttcttcaatgcactttcattatcataaattccttccaatgaatataagaatcccttccatccttctccaacaccaccttccctattcaaagc 6504882  T
Q  128 aggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaattccaagtctacat 227  Q
    |||||||||||| |||||||| |  || ||||| ||||||||||| |||||  |||||||||||||| |||||||||  |||||||||||    |||  |    
T  6504883 aggcaatgtccactcaacaagatctttaacataatcaacatcagaaaacaaatcttcagaaataggagccaatggtataagctgaattcctgtcctagct 6504982  T
Q  228 tctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttgtaaactcttctgcata 325  Q
    |||||  |||||||||||||||||||||||||||| ||||| || |||  ||| | || ||||| ||| || ||||||||||||||||||||| ||||    
T  6504983 tctctccattcaggtggagcaaaccaaagtccactatctcttttattattccacaaaactcccactattctattctcttttgtaaactcttcttcata 6505080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 10 - 280
Target Start/End: Original strand, 6525656 - 6525926
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaac 109  Q
    |||||||||| || || || |||||||| |||| |  |||| |||| ||||||||||| ||||| || ||||| |||||||| ||||| || ||||||||    
T  6525656 catcatcaaaacccttcaactttcttatcttctgctgtgcactttcattatcataaatcccttgcaaggcataaacaaaccccttccaaccctcttcaac 6525755  T
Q  110 accatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagc 209  Q
    |||||| ||||| |||||||| |||||||| || ||||||  |||||||||   ||||||||||||||| ||||||||||| |||| |||||||||||||    
T  6525756 accatccctttttaaagcaggtaatgtccactccacaagtcccttcacatacataacatcagagaacaagacttcagaaattggaagcaatggtaagagc 6525855  T
Q  210 tgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagacca 280  Q
    ||||| ||||| ||||||||| |  |||||| |||| ||||||| |  ||||| ||||| ||||| |||||    
T  6525856 tgaatcccaagcctacattctttccattcagctggaccaaaccataaaccactgtctcttttgttcgacca 6525926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 220
Target Start/End: Complemental strand, 6521421 - 6521256
Alignment:
Q  55 ccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaacaccatctcttttcaaagcaggcaatgtccattcaacaagttgctt 154  Q
    |||||||||||||||| | ||||||||| ||||| || |||||||||||  |||||||||| |||| |||| |||||||   |||||| ||||  | |||    
T  6521421 ccttatcataaattccctttaaagcatacacaaatcccttccatccttcaccaacaccatcactttccaaatcaggcaacacccattccacaacatcctt 6521322  T
Q  155 cacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaattccaag 220  Q
    |||| ||||||||||||| ||||| | ||| |||||||||| ||||||||| | |||||| |||||    
T  6521321 cacaaattcaacatcagaaaacaacatttctgaaataggaagcaatggtaaaacctgaatgccaag 6521256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 77 - 367
Target Start/End: Original strand, 6456725 - 6457015
Alignment:
Q  77 agcatatacaaaccctttccatccttcttcaacaccatctcttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaac 176  Q
    |||||||| ||| |||||||| |||||  ||||||| |  || ||||||  ||| ||||||||||| ||||| | ||| |||||  ||||||| || |||    
T  6456725 agcatatataaaacctttccacccttcaccaacacctttcctattcaaattaggtaatgtccattccacaagctcctttacataaccaacatccgaaaac 6456824  T
Q  177 aatacttcagaaataggaaccaatggtaagagctgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttag 276  Q
    ||| | || |  ||||| | ||| ||||| |  ||||| || || ||||| |||||  ||| ||  || |||||||| |||||||| |||||||| ||||    
T  6456825 aatgcctcggtgataggcaacaaaggtaaaacttgaatacctagcctacactctctccattgagcaggcgcaaaccatagtccactatctctcttattag 6456924  T
Q  277 accatagaaatcccattatcctgttctcttttgtaaactcttctgcatatagtttatctccttcttttatatgccaccacatttgagctgc 367  Q
    |||| | ||  | || ||   |||||||||| | ||| ||||| ||||| |||||||||||  ||||||||||||||||||||||||||||    
T  6456925 accaaacaacactcactactttgttctctttggaaaattcttcagcataaagtttatctccgccttttatatgccaccacatttgagctgc 6457015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 318
Target Start/End: Original strand, 6527585 - 6527786
Alignment:
Q  117 cttttcaaagcaggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaattc 216  Q
    ||||| || ||||| |||||||||||||| |||| ||||||||| |   ||||||| ||||| ||||||||||||||   ||| ||||| |  ||||  |    
T  6527585 ctttttaaggcaggtaatgtccattcaactagttccttcacatactttgcatcagaaaacaaaacttcagaaataggcgacaagggtaaaacttgaacac 6527684  T
Q  217 caagtctacattctctatattcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttgtaaactc 316  Q
    |||| ||   ||||||  ||||||  ||||||||| | | |||||| ||||||||||||||||||| || |||||| ||||| ||||| |||||||| ||    
T  6527685 caagccttgcttctctccattcagccggagcaaacgacaatccactgtctctcttgttagaccataaaactcccatgatcctattctcctttgtaaaatc 6527784  T
Q  317 tt 318  Q
    ||    
T  6527785 tt 6527786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 31 - 205
Target Start/End: Complemental strand, 6516985 - 6516811
Alignment:
Q  31 ttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaacaccatctcttttcaaagcagg 130  Q
    ||||||| |||||||||||| |||| ||||||||||||||||  || |||||   ||| ||  ||||||  | |||| ||||     |||| |||| |||    
T  6516985 ttcttatcttcttcaatgcactttcattatcataaattccttccaatgcataccgaaatcccgtccatctgttttcagcacctaacgttttgaaaggagg 6516886  T
Q  131 caatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaa 205  Q
    ||||| ||| ||||||||||  |||||||| ||||||||||| || || ||||||||||| |||  |||||||||    
T  6516885 caatgcccactcaacaagttctttcacataatcaacatcagaaaataaaacttcagaaattggacacaatggtaa 6516811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 1842529 - 1842443
Alignment:
Q  128 aggcaatgtccattcaacaagttgcttcacatattcaacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaat 214  Q
    |||||||||||| || ||||||  ||||||||| | |||||||||| |||| | |||||||||||| |  | |||||||||||||||    
T  1842529 aggcaatgtccactccacaagtcccttcacatacttaacatcagaggacaaaatttcagaaatagggagtagtggtaagagctgaat 1842443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 164 - 280
Target Start/End: Original strand, 46382859 - 46382975
Alignment:
Q  164 aacatcagagaacaatacttcagaaataggaaccaatggtaagagctgaattccaagtctacattctctatattcaggtggagcaaaccaaagtccactt 263  Q
    ||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||| |||| |||  |  | | || |||| ||||||| || |||||     
T  46382859 aacatcacaaaacaagacttcagaaataggaaacaatggtaagagctgaatcccaaggctacgttccttccacttagctggaccaaaccatagaccactg 46382958  T
Q  264 tctctcttgttagacca 280  Q
    ||||| |||||||||||    
T  46382959 tctcttttgttagacca 46382975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 99
Target Start/End: Complemental strand, 3754692 - 3754632
Alignment:
Q  39 ttcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatc 99  Q
    |||||||||||| |||| ||||||||||||||||| |||| ||| | ||||||||||||||    
T  3754692 ttcttcaatgcattttctttatcataaattccttgcaaagaatagataaaccctttccatc 3754632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 10 - 103
Target Start/End: Original strand, 4045517 - 4045610
Alignment:
Q  10 catcatcaaatccttttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttc 103  Q
    |||||||||| ||||| ||  |||| ||||||||||||||| | | |||||||||||  ||||| ||||||||   |||||||||||| |||||    
T  4045517 catcatcaaaacctttcaacattctaatattcttcaatgcattcttcttatcataaacaccttgcaaagcataggtaaaccctttccaaccttc 4045610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 9666187 - 9666042
Alignment:
Q  24 tttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaacaccatctcttttca 123  Q
    ||||| |||||||| |||| ||| |||   ||||||||||||||||| || |||||||| | ||| || ||||| |||||| |||  |||||   || ||    
T  9666187 tttaactttcttatcttctccaaagcaccatccttatcataaattccctgcaaagcatacaaaaaacccttccaaccttctccaatgccatcctcttcca 9666088  T
Q  124 aagcaggcaatgtccattcaacaagttgcttcacatattcaacatc 169  Q
    |||||| || |  ||| || ||||||||||||||||| ||||||||    
T  9666087 aagcagacactcgccactcgacaagttgcttcacataatcaacatc 9666042  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 24 - 169
Target Start/End: Complemental strand, 13537211 - 13537066
Alignment:
Q  24 tttaaatttcttatattcttcaatgcagtttccttatcataaattccttgtaaagcatatacaaaccctttccatccttcttcaacaccatctcttttca 123  Q
    ||||| |||||||| |||| ||| |||   ||||||||||||||||| || |||||||| | ||| || ||||| |||||| |||  |||||   || ||    
T  13537211 tttaactttcttatcttctccaaagcaccatccttatcataaattccctgcaaagcatacaaaaaacccttccaaccttctccaatgccatcctcttcca 13537112  T
Q  124 aagcaggcaatgtccattcaacaagttgcttcacatattcaacatc 169  Q
    |||||| || |  ||| || ||||||||||||||||| ||||||||    
T  13537111 aagcagacactcgccactcgacaagttgcttcacataatcaacatc 13537066  T

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Target: chr1 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 35244662 - 35244581
Alignment:
Q  237 tcaggtggagcaaaccaaagtccactttctctcttgttagaccatagaaatcccattatcctgttctcttttgtaaactctt 318  Q
    |||| |||||||||| | || ||||| || ||||| |||||||| | || |||||| ||||| |||||||||||||| ||||    
T  35244662 tcagttggagcaaacaagagaccactatccctcttattagaccacaaaactcccatgatcctattctcttttgtaaaatctt 35244581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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