View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4854-Insertion-13 (Length: 411)
Name: NF4854-Insertion-13
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4854-Insertion-13 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 356; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 7 - 411
Target Start/End: Original strand, 53758224 - 53758628
Alignment:
| Q |
7 |
aagatgttcttagactcttgattttggtctgatagtgttgttttcattttctaatgaaactctatgttcttgtggtaatgtgttgaaaaggaatgcctca |
106 |
Q |
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| T |
53758224 |
aagatgttcttagactcttgattttggtctgatagtgttgttttcattttctaatgaaactctatgttcttttggtaatgtgttgaaaaggaatgcctca |
53758323 |
T |
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| Q |
107 |
tcacaaacttctcagtataattaaatagaacttttttgttgacagcaaatagaacttaaattaccataaaaacatgcacttcctannnnnnngtccttcc |
206 |
Q |
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| T |
53758324 |
tcacaaacttctcagtataattaaatagaacttttttgttgacagcaaatagaacttaaattaccataaaaacatgcacttcctatttttttttccttcc |
53758423 |
T |
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| Q |
207 |
ctgcgactattctgatactggctttagggcttaaccaagtacaaaggtagaaaacggtcctctttcaaacactttttaggttaaatacaagtacaagtac |
306 |
Q |
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| T |
53758424 |
ctgcgactattctgatactggctttagggcttaaccaagtacaaatgtagaaaacagtcctctttcaaacactttttaggttaaatacaagtacaagtac |
53758523 |
T |
|
| Q |
307 |
agttactaaacacttaatttgaagttgaaccctttccgtaggttggtgcccaccccagcttgcgactgctatgtacactattcttcgtcttgtccctatt |
406 |
Q |
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| T |
53758524 |
agttactaaacacttgatttgaagttgaaccctttccgtaggttggtgcccaccccaccttgcgactgctatgtgcactattcttcgtcttgtccctatt |
53758623 |
T |
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| Q |
407 |
tgcgg |
411 |
Q |
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| T |
53758624 |
tgcgg |
53758628 |
T |
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