View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4854-Insertion-16 (Length: 323)

Name: NF4854-Insertion-16
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4854-Insertion-16
NF4854-Insertion-16
[»] chr7 (1 HSPs)
chr7 (33-320)||(4050351-4050636)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 33 - 320
Target Start/End: Complemental strand, 4050636 - 4050351
Alignment:
Q  33 tcctctcgcagctataccccacgccgtcacacaacaggtagcagcatacttcccacaagactttaaactgatggtgatgtcaatttaatcatcaaccatc 132  Q
    ||||||||||||||||||||| ||| |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  4050636 tcctctcgcagctataccccatgcc-tcacacaacaggtagcagcacacttcccagaagactttaaactgatggtgatgtcaatttaatcatcaaccatc 4050538  T
Q  133 ttactatttgcccttccctccaactacatttgttgtctcacaatttttcatcttttacctcttttaccacaatttttaatcataacctcttcaactccaa 232  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||||||| |||||||||||||    
T  4050537 ttactatttgcccttccctccaactacatttgttgtctcacaatttttcctcttttacctcttttaccacaagtttttatcataacttcttcaactccaa 4050438  T
Q  233 agtgtgcttacgcgtcctcttaaagattcccttgctctcacataaatcataacacccaaggacttcttagttgtacaactttgatgcc 320  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  4050437 agtgtgcttatgcgt-ctcttaaagattcccttgctctcacataaatcataacacccaaggacttcatagttgtacaactttgatgcc 4050351  T

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