View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4854_low_10 (Length: 357)
Name: NF4854_low_10
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4854_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 12 - 340
Target Start/End: Complemental strand, 35309551 - 35309223
Alignment:
| Q |
12 |
agagataagttgggaaaaatgatcacaggcattgcataaagggagatggcccttcaacctttttgtctattgagtagtcctttcaaagtactttaccatt |
111 |
Q |
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| T |
35309551 |
agagataagttgggaaaaatgatcacaggcattgcataaagggagatggcccttcaacctttttgtctattgagtagtcctttcaaagtactttaccatt |
35309452 |
T |
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| Q |
112 |
ttctttacctgaaatactgttgtttgtatcaattgaaactcgttttcacaaatgatgtaacacatcatttaactataattgtaagaaactacaatagaga |
211 |
Q |
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| T |
35309451 |
ttctttacctgaaatactgttgtttgtatcaattgaaactcgttttcacaaatgatgtaacacatcatttaactgtaattgtaagaaactacaatagaga |
35309352 |
T |
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| Q |
212 |
gtggtctttcaagaaattaatcaagtacagaatccttgatcgaccaatcgataaaatgtatgtgacatcaaaataattaataacttgcaattgaagttcc |
311 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35309351 |
gtggtctttcaagaaattaatcaagtacagaatccttgatcgaccaatcgataaaatgtatgtgacatcaaaataattaataacttgcaattgaagttcc |
35309252 |
T |
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| Q |
312 |
aaagtgtacgacactgaaattcaattatg |
340 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
35309251 |
aaagtgtacgacactgaaattcaattatg |
35309223 |
T |
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