View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4854_low_18 (Length: 309)
Name: NF4854_low_18
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4854_low_18 |
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Alignment Details
Target: chr4 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 12 - 294
Target Start/End: Complemental strand, 32777394 - 32777112
Alignment:
| Q |
12 |
tactatttaactaaaaatatctaactaacaaatatacaaataaaccaactttttgtttcattatgctcatatgtgactgaatgctacggcaatatcttga |
111 |
Q |
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| T |
32777394 |
tactatttaactaaaaatatctaactaacaaatatacaaattaaccaactttttgtttcattatgctcatatgtgactgaatgctacggcaatatcttga |
32777295 |
T |
|
| Q |
112 |
taagtagtaaatgccaaggtgcagttggtgaggaactaaagcatttgcagaacaacaataatgatgtagggtcacaaaacagtgtatttttaacacatat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32777294 |
taagtagtaaatgccaaggtgcagttggtgaggaactaaagcatttgcagaacaacaataatgatgtagggtcacaaaacagtgtatttttaacacatat |
32777195 |
T |
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| Q |
212 |
gaatcatttggtcctccctagctatagtaagtgcctacggggaagatatagtggtgattagtgtgaatggaaatattgatact |
294 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
32777194 |
gaatcatttggtcctccctagctatagtaagtgcctacggggaagatatagtggcgattagtgtgaatggaaatattgatact |
32777112 |
T |
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