View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4854_low_24 (Length: 241)
Name: NF4854_low_24
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4854_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 9 - 225
Target Start/End: Original strand, 34826568 - 34826784
Alignment:
| Q |
9 |
acaatgagcctgatgcacaaccatcacccaaatgacctccatctttgctataactttggagtatttttctcacatcaacagattttccaatataaaccac |
108 |
Q |
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| T |
34826568 |
acaatgagcctgatgcacaaccatcacccaaatgacctccatctttgctataactttggagtatttttctcacatcaacagattttccaatataaaccac |
34826667 |
T |
|
| Q |
109 |
tactacgccatgagggtcagtcgcaagcttgtaaatttcacaccctaaatcactagtcgacgaacctacaccaagctcatacactcccacactgaaattt |
208 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34826668 |
tactacgccatgagggtcggtcgcaagcttgtaaatttcacaccctaaatcactagtcgacgaacctacaccaagctcatacactcccacactgaaattt |
34826767 |
T |
|
| Q |
209 |
tgtggcaggttttcttt |
225 |
Q |
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||||||||||||||||| |
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| T |
34826768 |
tgtggcaggttttcttt |
34826784 |
T |
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