View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4854_low_7 (Length: 409)
Name: NF4854_low_7
Description: NF4854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4854_low_7 |
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Alignment Details
Target: chr4 (Bit Score: 392; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 3 - 402
Target Start/End: Original strand, 51911792 - 51912191
Alignment:
| Q |
3 |
cttttatgtgcagtcgtttgccatgttttaatctgtcttggatctgctgttgctgctgctgctgtgatggattatctgtacatctaaaattaccaagctg |
102 |
Q |
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| T |
51911792 |
cttttatgtgcagtcgtttgccatgttttaatctgtcttggatctgctgctgctgctgctgctgtgatggattatctgtacatctaaaattaccaagctg |
51911891 |
T |
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| Q |
103 |
ctgcagtgactgtaaaccatgcagttgttgcagttgcagcaactgttttccatccttcacttgttccttacctaagtggaactgttgctgttgtttctct |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51911892 |
ctgcagtgactgtaaaccatgcagttgttgcagttgcagcaactgttttccatccttcacttgttccttacctaagtggaactgttgctgttgtttctct |
51911991 |
T |
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| Q |
203 |
tgtcccaaatcaaattgctgtaaacaaagccttggttcgggaaattgttgtacttttccaactagttgcaattttgggtgtccatcatgcccttctttat |
302 |
Q |
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| T |
51911992 |
tgtcccaaatcaaattgctgtaaacaaagccttggttcgggaaattgttgtacttttccaactagttgcaattttgggtgtccatcatgcccttctttat |
51912091 |
T |
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| Q |
303 |
gcagttgcaaatgcacctgcacttgctcttgcccaacttgtccaaaggtaaatccatgttgctgttgtacaaagtcatgttttaatccttcttgtctctg |
402 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
51912092 |
gcagttgcaaatgcacctgcacttgctcttgcccaacttgtccaaaggtaaatccatgttgctgttgtacaaagtcatgttttaatccttcttgtttctg |
51912191 |
T |
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