View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4855-Insertion-7 (Length: 426)
Name: NF4855-Insertion-7
Description: NF4855
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4855-Insertion-7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 8 - 426
Target Start/End: Original strand, 51360779 - 51361197
Alignment:
| Q |
8 |
caagcttgccatgtttgccacaaatcctatgttatcaagcaacatcattgctgcaatcgaaacataaatgaatttcggtttatttcaaaaacaaattaaa |
107 |
Q |
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| T |
51360779 |
caagcttgccatgtttgccacaaatcctatgttatcaagcaacatcattgctgcaatcgaaacataaatgaatttcggtttatttcaaaaacaaattaaa |
51360878 |
T |
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| Q |
108 |
ggaattgtgatgaacatatgtagtttacccaccaaagatgaaatgagtagctctatatcctccttgtttcggtttacttactgcttggtactcaacatct |
207 |
Q |
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| T |
51360879 |
ggaattgtgatgaacatatatagtttacccaccaaagatgaaatgagtagctctatatcctccttgtttcggtttacttactgcttggtactcaacatct |
51360978 |
T |
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| Q |
208 |
ttaacattagtctcatcttttgaatcctgtattttaaaatcaacacattttaagcatatagtttaaaaaatggtgagaaccatttttgtgagatatacta |
307 |
Q |
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| T |
51360979 |
ttaacattagtctcatcttttgaatcctgtattttaaaatcaacacattttaagcatatagtttaaaaaatggtgagaaccatttttgtgagatatacta |
51361078 |
T |
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| Q |
308 |
ttggagaatgattcaataacttcaacaaaaagaagttgaagacgaatatgatgatggttgcataaatcattctgtgtagacacactaaattttatgttcg |
407 |
Q |
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| T |
51361079 |
ttggagaatgattcaataacttcaacaaaaagaagttgaagacgaatatgatgatggttgcataaataattttgtgtagacacgctaaattttatgttcg |
51361178 |
T |
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| Q |
408 |
attcactcaatcagtttat |
426 |
Q |
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| T |
51361179 |
attcactcaatcagtttat |
51361197 |
T |
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