View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4856-Insertion-2 (Length: 628)
Name: NF4856-Insertion-2
Description: NF4856
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4856-Insertion-2 |
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Alignment Details
Target: chr5 (Bit Score: 571; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 571; E-Value: 0
Query Start/End: Original strand, 7 - 616
Target Start/End: Complemental strand, 18723684 - 18723074
Alignment:
| Q |
7 |
aacaatcacttaaacactgttaatgccacttagtccatttaaccctacacgcaatcacttaataaacagtttcacggtttgtggatggatgttggttaag |
106 |
Q |
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| T |
18723684 |
aacaatcacttaaacactgttaatgccacttagtccaattaaccctacacacaatcacttaataaacggtttcacggtttgtggatggatgttggttaag |
18723585 |
T |
|
| Q |
107 |
atactcaagtgttctggtttattttacaagggacaaaaaattgagcttttcttctgaaggactaatctgaactttgtgccttttgtacggaatcagaatg |
206 |
Q |
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| T |
18723584 |
atactcaagtgttctggtttattttacaagggacaaaaaattgggcttttcttctgaagggctaatctgaactttgtgccttttgtacggaatcagaagg |
18723485 |
T |
|
| Q |
207 |
aaatttcactcaaatacataaacgatcatagaatagaagtactaagaaagtactaagaatcatacagagcattctataaacaagaaatatgaaagtagtg |
306 |
Q |
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| T |
18723484 |
aaatttcactcaaatacataaacgatcatagaatagaagtactaagaaagtactaagaatcatacacagcattctataaacaagaaatatgaaagtagtg |
18723385 |
T |
|
| Q |
307 |
cattgcagttatacctggtaggaccaacatttcctctcatgacgccttcgatgatggctttccgttctcctggtctttgacagcccatcttgagtatttt |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18723384 |
cattgcagttatacctggtaggaccaacatttcctctcatgacgccttcgatgatggctttccgttctcctggtctttgacagcccatcttgagtatttt |
18723285 |
T |
|
| Q |
407 |
tgccgtctgatcatccgacagtttcccaaggaacttctgtccttcacagatcacacaaagttccatagggagataacaaggtttacttctactaatttgc |
506 |
Q |
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| T |
18723284 |
tgccgtctgatcatccgacagtttcccaaggaacttctgtccttcacagatcacacaaagctccatagggagataacaaggtttacttctactaatttgc |
18723185 |
T |
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| Q |
507 |
aagcat-gccacttcctgaattgaatgtcgtagttatagtgatctttaaagtaactcataagcctcagattctttccatctctatcaggaaaccaaagat |
605 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
18723184 |
aagcatggccacttcctgaattgaatgtcgtagttatagtgatctttaaagtaactcataagcctcagattctttccatctctatcaggaaaccaaagat |
18723085 |
T |
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| Q |
606 |
tttcagttgcc |
616 |
Q |
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| T |
18723084 |
tttcagttgcc |
18723074 |
T |
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