View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4857-Insertion-2 (Length: 866)

Name: NF4857-Insertion-2
Description: NF4857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4857-Insertion-2
NF4857-Insertion-2
[»] chr3 (50 HSPs)
chr3 (7-309)||(30901112-30901414)
chr3 (308-585)||(18996967-18997244)
chr3 (308-585)||(18999506-18999783)
chr3 (308-585)||(32677477-32677754)
chr3 (308-587)||(29371538-29371817)
chr3 (308-585)||(39528749-39529026)
chr3 (308-586)||(1351996-1352274)
chr3 (307-585)||(41349370-41349648)
chr3 (308-585)||(39806979-39807256)
chr3 (305-578)||(29014687-29014960)
chr3 (584-850)||(30901413-30901684)
chr3 (307-586)||(36737833-36738112)
chr3 (307-570)||(39518422-39518685)
chr3 (307-579)||(38855323-38855595)
chr3 (309-582)||(22157261-22157534)
chr3 (322-585)||(28228436-28228701)
chr3 (309-582)||(21974152-21974425)
chr3 (309-582)||(21996583-21996856)
chr3 (308-585)||(32839949-32840226)
chr3 (422-587)||(55365906-55366071)
chr3 (326-570)||(49040862-49041107)
chr3 (336-423)||(55367714-55367801)
chr3 (308-427)||(840730-840849)
chr3 (516-585)||(49319347-49319416)
chr3 (552-588)||(41349368-41349404)
chr3 (306-341)||(1352240-1352275)
chr3 (552-587)||(39518651-39518686)
chr3 (552-586)||(29014689-29014723)
chr3 (307-341)||(29371782-29371816)
chr3 (299-341)||(32677721-32677763)
chr3 (552-586)||(36737833-36737867)
chr3 (552-586)||(38855561-38855595)
chr3 (552-585)||(1351996-1352029)
chr3 (308-341)||(18996967-18997000)
chr3 (552-585)||(18997211-18997244)
chr3 (308-341)||(18999506-18999539)
chr3 (552-585)||(18999750-18999783)
chr3 (308-341)||(39528749-39528782)
chr3 (552-585)||(39528993-39529026)
chr3 (308-341)||(41349615-41349648)
chr3 (308-340)||(46878980-46879012)
chr3 (553-585)||(46878980-46879012)
chr3 (307-341)||(55365907-55365941)
chr3 (304-341)||(22157254-22157291)
chr3 (308-341)||(28228436-28228469)
chr3 (552-585)||(29371538-29371571)
chr3 (552-585)||(32677477-32677510)
chr3 (552-585)||(39806979-39807012)
chr3 (308-341)||(39807223-39807256)
chr3 (308-341)||(49319347-49319380)
[»] chr7 (50 HSPs)
chr7 (308-585)||(17904163-17904440)
chr7 (307-585)||(26770179-26770457)
chr7 (307-585)||(46467334-46467612)
chr7 (314-586)||(29427170-29427442)
chr7 (308-585)||(6387692-6387969)
chr7 (308-585)||(37179331-37179608)
chr7 (306-585)||(29890824-29891103)
chr7 (306-587)||(4405107-4405388)
chr7 (308-577)||(9876271-9876539)
chr7 (306-585)||(6389732-6390003)
chr7 (345-587)||(41921892-41922133)
chr7 (326-585)||(12252069-12252331)
chr7 (307-463)||(31502652-31502809)
chr7 (462-581)||(31503091-31503210)
chr7 (326-570)||(33974506-33974753)
chr7 (326-587)||(31858110-31858373)
chr7 (308-570)||(46689878-46690140)
chr7 (307-565)||(9215462-9215722)
chr7 (326-527)||(48049057-48049261)
chr7 (307-447)||(9332458-9332599)
chr7 (476-586)||(19523863-19523975)
chr7 (326-565)||(5514797-5515038)
chr7 (486-582)||(9332364-9332460)
chr7 (306-495)||(22753066-22753257)
chr7 (326-570)||(7839072-7839315)
chr7 (517-585)||(29722955-29723023)
chr7 (470-586)||(43701550-43701666)
chr7 (328-378)||(19523813-19523863)
chr7 (362-586)||(33915716-33915940)
chr7 (470-585)||(33379130-33379244)
chr7 (515-570)||(49011065-49011120)
chr7 (302-341)||(46467579-46467618)
chr7 (552-586)||(4405353-4405387)
chr7 (307-341)||(29427408-29427442)
chr7 (552-586)||(29890825-29890859)
chr7 (307-341)||(43701550-43701584)
chr7 (553-587)||(46467333-46467367)
chr7 (308-341)||(6387936-6387969)
chr7 (308-341)||(17904163-17904196)
chr7 (552-585)||(17904407-17904440)
chr7 (308-341)||(26770179-26770212)
chr7 (308-341)||(29723381-29723414)
chr7 (552-585)||(29723381-29723414)
chr7 (552-585)||(37179331-37179364)
chr7 (308-341)||(37179575-37179608)
chr7 (308-340)||(29891071-29891103)
chr7 (553-587)||(26770424-26770458)
chr7 (307-340)||(4405108-4405141)
chr7 (552-585)||(6387692-6387725)
chr7 (308-341)||(33379211-33379244)
[»] chr8 (35 HSPs)
chr8 (308-586)||(33837729-33838007)
chr8 (308-585)||(45334276-45334553)
chr8 (308-585)||(2508796-2509073)
chr8 (308-585)||(28378947-28379224)
chr8 (308-587)||(25106209-25106488)
chr8 (308-585)||(38495472-38495749)
chr8 (308-586)||(9739984-9740263)
chr8 (305-580)||(13469505-13469777)
chr8 (323-541)||(2626253-2626472)
chr8 (307-588)||(32183480-32183762)
chr8 (462-586)||(27793345-27793469)
chr8 (323-463)||(27793059-27793197)
chr8 (516-586)||(27024432-27024502)
chr8 (518-586)||(25978969-25979037)
chr8 (517-586)||(8235161-8235230)
chr8 (552-588)||(27027655-27027691)
chr8 (305-341)||(33837973-33838009)
chr8 (523-570)||(2626667-2626714)
chr8 (306-341)||(9739983-9740018)
chr8 (306-341)||(27024431-27024466)
chr8 (307-341)||(27027655-27027689)
chr8 (308-341)||(2509040-2509073)
chr8 (552-585)||(25106455-25106488)
chr8 (304-341)||(25979003-25979040)
chr8 (552-585)||(28379191-28379224)
chr8 (552-585)||(33837729-33837762)
chr8 (552-585)||(45334276-45334309)
chr8 (308-341)||(45334520-45334553)
chr8 (470-550)||(3203413-3203492)
chr8 (553-585)||(9740231-9740263)
chr8 (307-341)||(25106210-25106244)
chr8 (307-417)||(25978717-25978827)
chr8 (553-586)||(13469507-13469540)
chr8 (305-346)||(27793430-27793471)
chr8 (552-585)||(38495472-38495505)
[»] chr5 (35 HSPs)
chr5 (307-585)||(29874954-29875232)
chr5 (308-585)||(12398946-12399223)
chr5 (307-585)||(34208538-34208816)
chr5 (307-585)||(23090298-23090576)
chr5 (314-585)||(4145694-4145965)
chr5 (308-585)||(4695162-4695439)
chr5 (323-586)||(3077596-3077859)
chr5 (308-570)||(42757805-42758072)
chr5 (308-520)||(22645909-22646121)
chr5 (337-570)||(12096231-12096466)
chr5 (328-586)||(19574685-19574943)
chr5 (516-585)||(41610625-41610694)
chr5 (516-585)||(42793040-42793109)
chr5 (345-564)||(22528023-22528244)
chr5 (552-590)||(42793562-42793600)
chr5 (326-431)||(4939676-4939781)
chr5 (518-582)||(4434783-4434847)
chr5 (552-588)||(29875198-29875234)
chr5 (300-340)||(41610365-41610405)
chr5 (553-587)||(23090543-23090577)
chr5 (307-341)||(42793562-42793596)
chr5 (552-585)||(12398946-12398979)
chr5 (308-341)||(12399190-12399223)
chr5 (308-341)||(23090298-23090331)
chr5 (308-341)||(34208538-34208571)
chr5 (553-586)||(41610372-41610405)
chr5 (552-585)||(42757805-42757838)
chr5 (326-425)||(32144285-32144385)
chr5 (306-341)||(3077595-3077630)
chr5 (516-587)||(8718023-8718094)
chr5 (552-587)||(34208782-34208817)
chr5 (536-570)||(594328-594362)
chr5 (308-341)||(4145694-4145727)
chr5 (308-341)||(29874954-29874987)
chr5 (308-341)||(42793040-42793073)
[»] chr1 (40 HSPs)
chr1 (308-586)||(47669118-47669396)
chr1 (307-585)||(46220259-46220537)
chr1 (311-585)||(9831503-9831777)
chr1 (307-585)||(10737700-10737978)
chr1 (306-586)||(48564817-48565096)
chr1 (310-585)||(3384597-3384870)
chr1 (323-587)||(4817267-4817531)
chr1 (308-586)||(4055483-4055761)
chr1 (323-585)||(18126851-18127112)
chr1 (308-570)||(8889457-8889720)
chr1 (357-584)||(7414208-7414436)
chr1 (308-565)||(39241172-39241429)
chr1 (309-446)||(1236071-1236208)
chr1 (483-585)||(1236205-1236307)
chr1 (305-431)||(37875724-37875849)
chr1 (352-562)||(26842462-26842673)
chr1 (506-586)||(1749521-1749601)
chr1 (313-570)||(49112282-49112535)
chr1 (516-585)||(33020206-33020275)
chr1 (413-586)||(33846758-33846936)
chr1 (413-586)||(33947042-33947220)
chr1 (305-341)||(4055481-4055517)
chr1 (305-341)||(47669116-47669152)
chr1 (307-341)||(4817268-4817302)
chr1 (552-586)||(10737700-10737734)
chr1 (552-586)||(46220503-46220537)
chr1 (308-341)||(9831503-9831536)
chr1 (308-341)||(18126851-18126884)
chr1 (308-341)||(33020206-33020239)
chr1 (552-585)||(47669363-47669396)
chr1 (552-584)||(1236071-1236103)
chr1 (554-586)||(48565063-48565095)
chr1 (552-587)||(33023428-33023463)
chr1 (457-528)||(37875849-37875920)
chr1 (552-582)||(9831747-9831777)
chr1 (307-341)||(33023428-33023462)
chr1 (552-586)||(37875726-37875760)
chr1 (308-341)||(1236274-1236307)
chr1 (552-585)||(8889687-8889720)
chr1 (308-341)||(46220259-46220292)
[»] chr2 (21 HSPs)
chr2 (308-583)||(15233757-15234032)
chr2 (308-588)||(43040849-43041129)
chr2 (308-586)||(41252414-41252693)
chr2 (312-586)||(35792911-35793184)
chr2 (308-585)||(44104546-44104833)
chr2 (323-585)||(41642891-41643156)
chr2 (327-570)||(31903400-31903641)
chr2 (388-587)||(31296081-31296278)
chr2 (308-570)||(21727684-21727949)
chr2 (516-585)||(10118660-10118729)
chr2 (552-588)||(10112336-10112372)
chr2 (307-341)||(10112338-10112372)
chr2 (516-586)||(36963130-36963200)
chr2 (552-585)||(15233999-15234032)
chr2 (552-585)||(43040849-43040882)
chr2 (307-340)||(43041094-43041127)
chr2 (553-585)||(44104546-44104578)
chr2 (307-341)||(35793150-35793184)
chr2 (307-341)||(41252414-41252448)
chr2 (308-341)||(10118696-10118729)
chr2 (308-341)||(44104800-44104833)
[»] chr6 (23 HSPs)
chr6 (308-586)||(32274433-32274711)
chr6 (307-586)||(27312113-27312394)
chr6 (307-524)||(2543142-2543359)
chr6 (308-586)||(29452542-29452821)
chr6 (307-585)||(31170989-31171267)
chr6 (402-583)||(8504796-8504977)
chr6 (306-586)||(7156235-7156503)
chr6 (410-578)||(5003889-5004057)
chr6 (308-585)||(18741947-18742223)
chr6 (483-587)||(12174698-12174802)
chr6 (306-408)||(5008308-5008410)
chr6 (308-372)||(8504733-8504797)
chr6 (537-585)||(29302500-29302548)
chr6 (306-341)||(27312360-27312395)
chr6 (552-586)||(27312113-27312147)
chr6 (307-341)||(32274433-32274467)
chr6 (552-585)||(8504733-8504766)
chr6 (308-341)||(29302515-29302548)
chr6 (552-586)||(2543325-2543359)
chr6 (307-341)||(7156469-7156503)
chr6 (307-341)||(12174699-12174733)
chr6 (308-341)||(18741947-18741980)
chr6 (552-585)||(32274678-32274711)
[»] chr4 (28 HSPs)
chr4 (311-588)||(8955779-8956056)
chr4 (308-589)||(45590738-45591019)
chr4 (325-586)||(33288421-33288683)
chr4 (308-575)||(34334342-34334613)
chr4 (307-579)||(49162108-49162366)
chr4 (314-519)||(36971115-36971319)
chr4 (323-570)||(50774073-50774325)
chr4 (306-585)||(18835705-18835986)
chr4 (307-588)||(26025527-26025803)
chr4 (309-447)||(39482000-39482138)
chr4 (308-431)||(30469213-30469336)
chr4 (493-586)||(30469353-30469446)
chr4 (486-582)||(39481906-39482002)
chr4 (334-570)||(33108924-33109163)
chr4 (516-586)||(19256185-19256255)
chr4 (535-586)||(36016278-36016329)
chr4 (516-570)||(36968353-36968407)
chr4 (305-341)||(19256183-19256219)
chr4 (551-585)||(19257103-19257137)
chr4 (307-341)||(36016278-36016312)
chr4 (308-341)||(19257104-19257137)
chr4 (305-341)||(30469412-30469448)
chr4 (552-588)||(49162332-49162368)
chr4 (552-582)||(8955779-8955809)
chr4 (307-341)||(8956020-8956054)
chr4 (307-341)||(45590741-45590775)
chr4 (304-341)||(39481899-39481936)
chr4 (552-585)||(45590986-45591019)
[»] scaffold0103 (1 HSPs)
scaffold0103 (305-588)||(44616-44898)


Alignment Details
Target: chr3 (Bit Score: 279; Significance: 1e-156; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 7 - 309
Target Start/End: Original strand, 30901112 - 30901414
Alignment:
Q  7 agtaagaggggaaagcaattataaatagaaaggaaacgagaagatagagggtggagaagtaacaaccgagtgaaatgggttttaggtgctctctaattaa 106  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30901112 agtaagaggggaaagcaattataaatagaagggaaacgagaagatagagggtggagaagtaacaaccgagtgaaatgggttttaggtgctctctaattaa 30901211  T
Q  107 cccaagagaagtgtgtagagtcttgtcctagttaaatatacgaccaatattaatacaattaccctagctgtgtttcctctacccttttcttccccctctt 206  Q
    ||||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30901212 cccaagagaagtgtgaagaatcttatcctagttatatatacgaccaatattaatacaattaccctagctgtgtttcctctactcttttcttccccctctt 30901311  T
Q  207 aattgtcagttgaatttatcaaaagtcaacaatgacattcgtgctagtttagttatttgaatcatctttggagggttggctatatgaattgtataatgta 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30901312 aattgtcagttgaatttatcaaaagtcaacaatgacattcgtgctagtttagttatttgaatcatctttggagggttggctatatgaattgtataatgta 30901411  T
Q  307 ata 309  Q
    |||    
T  30901412 ata 30901414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 18997244 - 18996967
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18997244 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgcgttttttacttaaatgt 18997145  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997144 ccttatttatcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 18997045  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997044 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 18999783 - 18999506
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  18999783 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgcgttttttacttaaatgt 18999684  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18999683 ccttatttatcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 18999584  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18999583 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18999506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 32677477 - 32677754
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677477 tactccctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 32677576  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677577 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 32677676  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677677 taaattcactaaaacatcaaaagttttggtatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32677754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 308 - 587
Target Start/End: Original strand, 29371538 - 29371817
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371538 tactccctccattcattttcttttgatgttttagctcttgacacaaattttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 29371637  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371638 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaagtactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 29371737  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371738 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 29371817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 39529026 - 39528749
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  39529026 tactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 39528927  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39528926 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 39528827  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39528826 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 39528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 308 - 586
Target Start/End: Original strand, 1351996 - 1352274
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  1351996 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatgt 1352095  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1352096 ccttatttatcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 1352195  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1352196 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 1352274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 307 - 585
Target Start/End: Original strand, 41349370 - 41349648
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  41349370 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatg 41349469  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41349470 tccttatttatcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 41349569  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41349570 acaaattcactaaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 41349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 39806979 - 39807256
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||    
T  39806979 tactcccttcattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatgt 39807078  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
     ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39807079 tcttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacgagggtaaacttgagaaaacaataa 39807178  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39807179 caaattcactaaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggaagta 39807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 305 - 578
Target Start/End: Original strand, 29014687 - 29014960
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaa 404  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  29014687 taatactccctccattccttttcttttgatgttttagctcttgacacaagttttaagaagtaattaaagtatataaacatttgtgtgttttttacttaaa 29014786  T
Q  405 tgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa 504  Q
    ||||||||||||||||||||||||||| | ||||||||||  ||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  29014787 tgtccttatttatcattaaattcacatgtgataaaccaaaaatcgcaactactttaatagtttaatgtgttttccaacaagggtaaacttgagaaaacaa 29014886  T
Q  505 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 578  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  29014887 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaaagaatgga 29014960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 584 - 850
Target Start/End: Original strand, 30901413 - 30901684
Alignment:
Q  584 tatatgtcattaactaatcaattttgtatcttgttgattacattggaaatataaaacatctgttacttgcatgccctatcattaattgattatcactggt 683  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30901413 tatatgtcattaactaatcaattttgtatcttgttgattacattggaaatataaaacatctgttacttgcatgccctatcattaattgattatcactggt 30901512  T
Q  684 tttccttttgtttttg-ttcttcaagataatggaaaagtctttagctggggatggaacaaatatggacaggtgagtatattgcgctgccatttttattta 782  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30901513 tttccttttgtttttgtttcttcaagataatggaaaagtctttagctggggatggaacaaatatggacaggtgagtatattgcgctgccatttttattta 30901612  T
Q  783 tctcctattttaaaaatgaata-tattgaaag-tcta-ctgacatacctatttaagggat-atcttgaagtt 850  Q
    |||||||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||| |||||||||||    
T  30901613 tctcctattttaaaaatgaatattattgaaagttctacctgacatacttatttaagggataatcttgaagtt 30901684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 307 - 586
Target Start/End: Original strand, 36737833 - 36738112
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||     
T  36737833 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggaataattaaagtatataaacatttgtgtgttttttacttaaata 36737932  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36737933 tccttatttatcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaata 36738032  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| | |||||||    
T  36738033 ataaattcactaaaacatcaaaagttttaaaatatagttaaagttctaaaacatcaaaagaaaaggaatgaatggagtat 36738112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 307 - 570
Target Start/End: Complemental strand, 39518685 - 39518422
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  39518685 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaatgagtaattaaagtatataaacatttgtgtgttttttacttaaatg 39518586  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  39518585 tccttatttatcattaaattcacatgtgataaatcaaatgtcataactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaata 39518486  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  39518485 ataaattcactaaaatatcaaaagttttgaaatatagttgaagttttaaaacatcaaaaaaaaa 39518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 307 - 579
Target Start/End: Complemental strand, 38855595 - 38855323
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||| |||||    
T  38855595 atactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgatttttactaaaatg 38855496  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||| |||||||| |||| ||||||||||||||    
T  38855495 tccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgtttttcaacaaggataaaattgagaaaacaata 38855396  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggag 579  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  38855395 ataaattcactaaaacatcaaaagttttggaatatagttgatgttttaaaacatcaaaagaaaaggaatggag 38855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 309 - 582
Target Start/End: Complemental strand, 22157534 - 22157261
Alignment:
Q  309 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 408  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||| |||||||    
T  22157534 actccctccatttattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtctatttttgactaaaatgtc 22157435  T
Q  409 cttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataat 508  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||    
T  22157434 cttatttagtattaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataat 22157335  T
Q  509 aaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22157334 aaattcactaaaatatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 22157261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 322 - 585
Target Start/End: Complemental strand, 28228701 - 28228436
Alignment:
Q  322 cttttcttttgatgttttagctcttgacacaagttttaaggagtaatta---aagtatataaacatttgtgtgttttttacttaaatgtccttatttatc 418  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||||   |||||||||||||||||||||||||||||||||||| | || ||||||    
T  28228701 ctttttttttgatgttttggctcttgacacaagttttaagaagtaattattaaagtatataaacatttgtgtgttttttacttaaatgccatt-tttatc 28228603  T
Q  419 attaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcacta 518  Q
    ||||||||||||| | |||||||||| |||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28228602 attaaattcacatgtgataaaccaaatgtcacagctactttaatagtttattgtattttccaacaagggtaaacttgagaaaacaataataaattcacta 28228503  T
Q  519 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  28228502 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagta 28228436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 309 - 582
Target Start/End: Complemental strand, 21974425 - 21974152
Alignment:
Q  309 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 408  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||| |||| ||    
T  21974425 actccctccatttattttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtctatttttgactaaaatatc 21974326  T
Q  409 cttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataat 508  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||    
T  21974325 cttatttagtattaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataat 21974226  T
Q  509 aaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21974225 aaattcactaaaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21974152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 309 - 582
Target Start/End: Complemental strand, 21996856 - 21996583
Alignment:
Q  309 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 408  Q
    ||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| | ||||| ||| |||| ||    
T  21996856 actccctccatttattttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtctatttttgactaaaatatc 21996757  T
Q  409 cttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataat 508  Q
    ||||||||  ||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||||||| ||||||| |||||||||||||||    
T  21996756 cttatttagtattaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataat 21996657  T
Q  509 aaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21996656 aaattcactaaaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21996583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 183; E-Value: 2e-98
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 32840226 - 32839949
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtt-ttttacttaaatg 406  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  32840226 tactccctccattcattttcttttgatattttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttttacttaaatg 32840127  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    | ||||||||||||||||||||||| | |||||||||| |||| ||||| |||||||||||||||||||||| |||||||  |||||| |||||| ||||    
T  32840126 ttcttatttatcattaaattcacatgtgataaaccaaatgtcacaactattttaatagtttattgtgttttctaacaaggacaaacttaagaaaataata 32840027  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    || ||||||||||||||||||||  |||  ||||||||||||||||||||| || ||||||||| ||||||||||||||    
T  32840026 at-aattcactaaaacatcaaaaaatttaaaatatagttgaagttctaaaatataaaaagaaaatgaatggagggagta 32839949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 422 - 587
Target Start/End: Complemental strand, 55366071 - 55365906
Alignment:
Q  422 aaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaa 521  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  55366071 aaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttctaacaagggtaaacttgagaaaacaataataaattcactaaaa 55365972  T
Q  522 catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  55365971 catcaaaaaatttgaaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagtata 55365906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 326 - 570
Target Start/End: Original strand, 49040862 - 49041107
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||||||||||||| || ||||||| || ||||||||||||  |||| ||| |||||| ||||||  ||| |||||||||| ||||| |||||||    
T  49040862 tcttttgatgttttagctcctggcacaagtcttgaggagtaattaagttatagaaatatttgtatgttttagactaaaatgtccttgtttatgattaaat 49040961  T
Q  426 tcacatctaataaaccaaaggtcataactactttaatagtttattg---tgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| | ||||||||||||||  |||| ||||||||||||  ||   |||||| |||||||||||||| || ||||  |||| |||||  ||||||||    
T  49040962 tcacatttgataaaccaaaggtcccaactcctttaatagttttatggtttgtttttcaacaagggtaaacgtgggaaa--aatattaaatatactaaaac 49041059  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||||||  |||||||| |||||||||||||||||||||||||||||||    
T  49041060 atcaaatattttggaacatagttgaagttctaaaacatcaaaagaaaa 49041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 55367801 - 55367714
Alignment:
Q  336 ttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaa 423  Q
    ||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  55367801 ttttagctcttgatacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatgtccttatttatcattaa 55367714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 308 - 427
Target Start/End: Complemental strand, 840849 - 840730
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||  || ||||||||||||||| |||||| ||||||| ||||| | ||||||||||||| ||| |||||| ||||||  ||| ||||||    
T  840849 tactccctccattttttatcttttgatgttttaactcttggcacaagtcttaagaaataattaaagtatagaaaaatttgtatgttttggactaaaatgt 840750  T
Q  408 ccttatttatcattaaattc 427  Q
    |||||||||  |||||||||    
T  840749 ccttatttaggattaaattc 840730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 516 - 585
Target Start/End: Complemental strand, 49319416 - 49319347
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||||| ||||    
T  49319416 ctaaaacatcaaaatttttagaatgaagtttaagttctaaaacatcaaaagaaaaggaatggaggaagta 49319347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 41349404 - 41349368
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||||||||||||||||||||||    
T  41349404 ctaaaacatcaaaagaaaaggaatggagggagtatat 41349368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 1352275 - 1352240
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  1352275 aatactccctccattccttttcttttgatgttttag 1352240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 552 - 587
Target Start/End: Original strand, 39518651 - 39518686
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||||||||||||||||||||||||||||||||    
T  39518651 ctaaaacatcaaaagaaaaggaatggagggagtata 39518686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 29014723 - 29014689
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  29014723 ctaaaacatcaaaagaaaaggaatggagggagtat 29014689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 29371816 - 29371782
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  29371816 atactccctccattccttttcttttgatgttttag 29371782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 299 - 341
Target Start/End: Complemental strand, 32677763 - 32677721
Alignment:
Q  299 ataatgtaatactccctccattccttttcttttgatgttttag 341  Q
    ||||| || ||||||||||||||||||||||||||||||||||    
T  32677763 ataatttattactccctccattccttttcttttgatgttttag 32677721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 36737867 - 36737833
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  36737867 ctaaaacatcaaaagaaaaggaatggagggagtat 36737833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 38855561 - 38855595
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  38855561 ctaaaacatcaaaagaaaaggaatggagggagtat 38855595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 1352029 - 1351996
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  1352029 ctaaaacatcaaaagaaaaggaatggagggagta 1351996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 18996967 - 18997000
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  18996967 tactccctccattccttttcttttgatgttttag 18997000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 18997211 - 18997244
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  18997211 ctaaaacatcaaaagaaaaggaatggagggagta 18997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 18999506 - 18999539
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  18999506 tactccctccattccttttcttttgatgttttag 18999539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 18999750 - 18999783
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  18999750 ctaaaacatcaaaagaaaaggaatggagggagta 18999783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 39528749 - 39528782
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  39528749 tactccctccattccttttcttttgatgttttag 39528782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 39528993 - 39529026
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  39528993 ctaaaacatcaaaagaaaaggaatggagggagta 39529026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 41349648 - 41349615
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  41349648 tactccctccattccttttcttttgatgttttag 41349615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 46879012 - 46878980
Alignment:
Q  308 tactccctccattccttttcttttgatgtttta 340  Q
    |||||||||||||||||||||||||||||||||    
T  46879012 tactccctccattccttttcttttgatgtttta 46878980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 585
Target Start/End: Original strand, 46878980 - 46879012
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||    
T  46878980 taaaacatcaaaagaaaaggaatggagggagta 46879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 55365907 - 55365941
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||| |||||||||||||||||||||||||    
T  55365907 atactcccttcattccttttcttttgatgttttag 55365941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 22157254 - 22157291
Alignment:
Q  304 gtaatactccctccattccttttcttttgatgttttag 341  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  22157254 gtaatattccctccatttcttttcttttgatgttttag 22157291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 28228436 - 28228469
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||| ||||||||||||||||||||||||||||    
T  28228436 tactctctccattccttttcttttgatgttttag 28228469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 29371571 - 29371538
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||| ||||||||||||||    
T  29371571 ctaaaacatcaaaagaaaatgaatggagggagta 29371538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 32677510 - 32677477
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||| ||||||||||||||    
T  32677510 ctaaaacatcaaaagaaaatgaatggagggagta 32677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 39807012 - 39806979
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||| ||||||||    
T  39807012 ctaaaacatcaaaagaaaaggaatgaagggagta 39806979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 39807256 - 39807223
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    |||| |||||||||||||||||||||||||||||    
T  39807256 tacttcctccattccttttcttttgatgttttag 39807223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 49319347 - 49319380
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    |||| |||||||||||||||||||||||||||||    
T  49319347 tacttcctccattccttttcttttgatgttttag 49319380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 17904440 - 17904163
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17904440 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 17904341  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17904340 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 17904241  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17904240 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 17904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 307 - 585
Target Start/End: Complemental strand, 26770457 - 26770179
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  26770457 atactccctccattcattttcttttgatgttttaattcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaata 26770358  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26770357 tccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 26770258  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  26770257 ataaattcactaaaacatcaaaagttttggaatttagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 26770179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 307 - 585
Target Start/End: Original strand, 46467334 - 46467612
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46467334 atactccctccattccttttcttttgatgttttaactcttgacacaaattttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 46467433  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    | ||||||||||||||||||||||| | ||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  46467434 ttcttatttatcattaaattcacatgtgataaaccaaaggtcgcaactactttaatagtttattgtgttttccaacaaaggtaaacttgagaaaacaata 46467533  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46467534 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 46467612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 245; E-Value: 1e-135
Query Start/End: Original strand, 314 - 586
Target Start/End: Original strand, 29427170 - 29427442
Alignment:
Q  314 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttat 413  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29427170 ctccattcattttcttttgatgttttacctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtctttat 29427269  T
Q  414 ttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatt 513  Q
    |||||||||||||||||| | ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29427270 ttatcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatt 29427369  T
Q  514 cactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29427370 cactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 29427442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 6387692 - 6387969
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  6387692 tacttcctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 6387791  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6387792 ccttatttatcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgataaaacaataa 6387891  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6387892 caaattcactaaaacatcaaaagttttggaatatagttgcagttctaaaacatcaaaagaaaaggaatggagggagta 6387969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 37179331 - 37179608
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt-acttaaatg 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  37179331 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaatgaaagtatatagacatttgtgtgtttttttacttaaatg 37179430  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||| ||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  37179431 tccttgtttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaactt-agaaaacaata 37179529  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37179530 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 37179608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 306 - 585
Target Start/End: Original strand, 29890824 - 29891103
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29890824 aatactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgttttttacttaaat 29890923  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
    |||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  29890924 gtccttatttatcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaaggataaacttgagaaaacaat 29891023  T
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29891024 cataaattcactaaaacatcaaaaattttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 29891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 306 - 587
Target Start/End: Complemental strand, 4405388 - 4405107
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||    
T  4405388 aatactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgatttttactaaaat 4405289  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
    |||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||| |||||||||||||    
T  4405288 gtccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttatggtgttttccaacaaggataaaattgagaaaacaat 4405189  T
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  4405188 aataaattcactaaaacatcaaatgttttagaatatagttgaagttttaaaacatcaaaagaaaagaaatggagggagtata 4405107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 308 - 577
Target Start/End: Complemental strand, 9876539 - 9876271
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||| ||||||||| |||| |||| ||||||||||| ||| || ||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  9876539 tacttcctccattctttttttttt-atgttttagctattggcataagttttaaggagtaattaaaatatataaatatttgtgtgatttttactaaaatgt 9876441  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  9876440 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataa 9876341  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgg 577  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9876340 taaattcactaaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatgg 9876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 306 - 585
Target Start/End: Complemental strand, 6390003 - 6389732
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    ||||||||||| |||| |||||||||||||||||| |||||||||||||||||||| |||| |||||||||||||| |||||||||||||||||||||||    
T  6390003 aatactccctcaattctttttcttttgatgttttaactcttgacacaagttttaagaagtagttaaagtatataaatatttgtgtgttttttacttaaat 6389904  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
    |||||||||||||||||        | | ||||| |||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6389903 gtccttatttatcatta--------tgtgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaat 6389812  T
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  6389811 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaacaaaatgaatggagggagta 6389732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 195; E-Value: 1e-105
Query Start/End: Original strand, 345 - 587
Target Start/End: Original strand, 41921892 - 41922133
Alignment:
Q  345 ttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatctaataaaccaaa 444  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  41921892 ttgacacaagttttaaggagtaattaaagtatataaacatttgtgt-ttttttacttaaatgtccttatttatcattaaattcacatgtgataaaccaaa 41921990  T
Q  445 ggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagt 544  Q
    |||   ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  41921991 ggttgcaactactttaatagtttattgtgtttttcaacaagggtaaacttgataaaacaatattaaattcactaaaacatcaaaagttttggaatatagt 41922090  T
Q  545 tgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||||||||||||||||||||||| ||| |||||||||||    
T  41922091 tgaagttctaaaacatcaaaagaaaagaaatagagggagtata 41922133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 326 - 585
Target Start/End: Complemental strand, 12252331 - 12252069
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||||||||| | |||| ||||||| ||||||||||||||| ||||| ||| |||||| ||||||  ||| |||||||||||||||| |||||||    
T  12252331 tcttttgatgttttaacacttggcacaagtcttaaggagtaattaatgtatagaaatatttgtatgttttggactaaaatgtccttatttatgattaaat 12252232  T
Q  426 tcacatctaataaaccaaaggtcataactactttaatag-tttat--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| | |||| ||||| ||||||||| ||||||||| |||||  |||||||| |||| || ||||||||| |||||||| | |||||  | || |||    
T  12252231 tcacatgtgataagccaaaagtcataactcctttaatagttttatggtgtgtttttcaactagagtaaacttgggaaaacaagattaaatatattagaac 12252132  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  12252131 atcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatggagggagta 12252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 307 - 463
Target Start/End: Original strand, 31502652 - 31502809
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtg--ttttttacttaaa 404  Q
    ||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  31502652 atactccctccattc-ttttcttttgatgttttagctcttgatgcaagttttaaggagtaattaaagtatataaacatttgtgtgttttttttacttaaa 31502750  T
Q  405 tgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaata 463  Q
    ||||||||||||||||||||||||||| | |||| ||||| |||| |||||||||||||    
T  31502751 tgtccttatttatcattaaattcacatgtgataagccaaaagtcacaactactttaata 31502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 462 - 581
Target Start/End: Original strand, 31503091 - 31503210
Alignment:
Q  462 tagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 561  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31503091 tagtttatagtgttttccaacaagggtaaacttaagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 31503190  T
Q  562 aaaagaaaaggaatggaggg 581  Q
    ||||||||||||| ||||||    
T  31503191 aaaagaaaaggaacggaggg 31503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 326 - 570
Target Start/End: Complemental strand, 33974753 - 33974506
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||||||| ||| ||| || ||| ||  ||| |||| ||||||||||| ||||||     
T  33974753 tcttttgacgttttagctcttggcacaagtcttaaggagtaattaaagtatagaaatattggtatgtattggactaaaatatccttatttatgattaaac 33974654  T
Q  426 tcacatctaataaaccaaaggtcataactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| | |||| |  ||||||| |||| |||||||||||| ||  |||||||| ||||||||||||||||| ||||| |||| |||||  ||||||||    
T  33974653 tcacatgtgataagctgaaggtcacaactcctttaatagttttatggtgtgtttttcaacaagggtaaacttgggaaaaaaatattaaatatactaaaac 33974554  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    || |||  |||||||||||||||||||||| |||||||||||||||||    
T  33974553 ataaaatattttggaatatagttgaagttcgaaaacatcaaaagaaaa 33974506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 326 - 587
Target Start/End: Original strand, 31858110 - 31858373
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||||| |||||||||||||| ||||||| | | |||| ||||||||||| |||||||    
T  31858110 tcttttgatgttttaactcttgacacaaatcttaaggagtaattaaagaatataaacatttgtatgtttttgattaaaatatccttatttatgattaaat 31858209  T
Q  426 tcacatctaataaaccaaaggtcataactactttaata-gtttat--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    | |||| | ||||  ||||||||| ||||  |||||||  |||||  |||||||| |||| |||||||| ||| ||||| || | |||||  ||||||||    
T  31858210 ttacatgtgataagtcaaaggtcacaactcatttaatacttttatgatgtgtttttcaacgagggtaaatttgggaaaa-aaaattaaatatactaaaac 31858308  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||  ||||  ||||||||||||||| ||||||||||||||||||  |||||||||||||||    
T  31858309 atcaaatattttaaaatatagttgaagttgtaaaacatcaaaagaaaaaaaatggagggagtata 31858373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 308 - 570
Target Start/End: Complemental strand, 46690140 - 46689878
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||  || |||||||||||||||||||||| ||||| | ||||||||||||||||||||||||| |||||| ||||||  ||| ||||||    
T  46690140 tactccctccattttttatcttttgatgttttagctcttggcacaaatcttaaggagtaattaaagtatataaatatttgtatgttttggactaaaatgt 46690041  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagttt-attgtgt---tttccaacaagggtaaacttgagaaaaca 503  Q
    | ||||     ||||||||||||| | |||| ||||| |||| |||| |||||||||||| || ||||   ||| ||| ||||||||||||| ||||| |    
T  46690040 cattata----attaaattcacatgtgataagccaaatgtcacaacttctttaatagttttatcgtgtgttttttcaaaaagggtaaacttgggaaaaaa 46689945  T
Q  504 ataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||| |||    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  46689944 atattaaccatactaaaacatcaagtattttggaatatagttgaagttctaaaacatcaaaagaaaa 46689878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 307 - 565
Target Start/End: Original strand, 9215462 - 9215722
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||| |||  || ||||||||||||||||||||||  |||| | ||||| ||||||||||||| ||||| |||||| ||||||  ||| |||||    
T  9215462 atactccctctattttttatcttttgatgttttagctcttggtacaaatcttaagaagtaattaaagtacataaatatttgtatgttttggactaaaatg 9215561  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaat-agtttat--tgtgttttccaacaagggtaaacttgagaaaaca 503  Q
    |||||| |||| ||||||||||||| | ||||| ||||||||| |||| ||||||| | |||||  ||| |||| ||||||||||||| |||| |||| |    
T  9215562 tcctta-ttataattaaattcacatgtgataaatcaaaggtcacaactcctttaataattttatggtgtctttttcaacaagggtaaatttgaaaaaaaa 9215660  T
Q  504 ataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 565  Q
    ||| || ||  |||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  9215661 atattacatatactaaaacattaaatattttggaatatagttgaagttctaaaacatcaaaa 9215722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 326 - 527
Target Start/End: Complemental strand, 48049261 - 48049057
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    |||||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||| |||||| ||||||| ||| |||||||||||||||| |||||||    
T  48049261 tcttttgatgttttagctcttggcacaagtcttaagtagtaattaaagtatagaaatatttgtatgtttttgactaaaatgtccttatttatgattaaat 48049162  T
Q  426 tcacatctaataaaccaaaggtcataactactttaatagtt---tattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    | |||| | |||| |||||||||| |||| |||||||||||   || |||||||| ||||| ||||||||||| ||||| |||| |||||  ||||||||    
T  48049161 ttacatgtgataagccaaaggtcacaactcctttaatagttttctagtgtgtttttcaacaggggtaaacttgggaaaaaaatattaaatatactaaaac 48049062  T
Q  523 atcaa 527  Q
    |||||    
T  48049061 atcaa 48049057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 307 - 447
Target Start/End: Complemental strand, 9332599 - 9332458
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgt-gttttttacttaaat 405  Q
    |||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||  ||||||||| ||||    
T  9332599 atactccctccatttcttttcttttgatattttagctcttaacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttttactaaaat 9332500  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggt 447  Q
    |||||||||||  ||||||||||||| | ||||| |||||||    
T  9332499 gtccttatttagtattaaattcacatgtgataaatcaaaggt 9332458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 476 - 586
Target Start/End: Original strand, 19523863 - 19523975
Alignment:
Q  476 ttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca--aaagaaaagga 573  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  19523863 ttccaacaagggtaaacttgataaaacaataataaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaacaaaaaaaagga 19523962  T
Q  574 atggagggagtat 586  Q
    || ||||||||||    
T  19523963 atagagggagtat 19523975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 326 - 565
Target Start/End: Complemental strand, 5515038 - 5514797
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||||| |||||||||||||||||| |||| || |||||||| |||| ||| |||||| |||||| |||| |||||| ||||||||| |||||||    
T  5515038 tcttttgatgtattagctcttgacacaagtcttaatgaataattaaaatataaaaatatttgtatgttttgtactaaaatgttcttatttatgattaaat 5514939  T
Q  426 tcacatctaataaaccaaaggtcataactactttaatagtt---tattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| | ||||| ||||||||| ||||  ||||||||||   || ||||||||  ||||||||||||||||| |||  |||| |||||  ||||||      
T  5514938 tcacatgtgataaatcaaaggtcacaactcttttaatagttttatagtgtgttttttaacaagggtaaacttga-aaataaatattaaatatactaaata 5514840  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaa 565  Q
    ||||||  |||| ||||||| || |||||||||||||| ||||    
T  5514839 atcaaatattttagaatatatttaaagttctaaaacattaaaa 5514797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 9332460 - 9332364
Alignment:
Q  486 ggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  9332460 ggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaaaaatggaggga 9332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 306 - 495
Target Start/End: Original strand, 22753066 - 22753257
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    ||||||||||||||| ||| | |||||||||||||| ||| ||||||||| |||| |||||||| ||| ||| ||| |||||  ||||||  ||| ||||    
T  22753066 aatactccctccatttcttatattttgatgttttagttctggacacaagtcttaatgagtaattgaagcataaaaatatttgaatgttttggactaaaat 22753165  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttat--tgtgttttccaacaagggtaaacttg 495  Q
    ||| |||||||||||||||||||||| | ||||  ||||||||| ||||  |||||||||||||  | |||||||||||||| |||||||||    
T  22753166 gtctttatttatcattaaattcacatgtgataagtcaaaggtcacaacttttttaatagtttatagtttgttttccaacaagcgtaaacttg 22753257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 326 - 570
Target Start/End: Complemental strand, 7839315 - 7839072
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||| |||||||| ||  ||||||| ||||||||||||||||||||||||| |||||| ||||||  | | |||||    ||||||| |||||||    
T  7839315 tcttttgatattttagctgttatcacaagtattaaggagtaattaaagtatataaatatttgtatgttttgaaataaaatg----tatttatgattaaat 7839220  T
Q  426 tcacatctaataaaccaaaggtcataactactttaat-agtttat--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| |||||||||||| |||| |||| ||||||| | |||||  |||||||| |||  | |||||||||  ||||| | || | |||  |||||||     
T  7839219 tcacatgtaataaaccaaatgtcacaactcctttaataattttatggtgtgtttttcaatgaaggtaaacttaggaaaaaagtattcaatatactaaaat 7839120  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    || |||   ||||||||||| || |||||| |||||||||||| ||||    
T  7839119 ataaaataatttggaatataattaaagttcaaaaacatcaaaataaaa 7839072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 517 - 585
Target Start/End: Complemental strand, 29723023 - 29722955
Alignment:
Q  517 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||    
T  29723023 taaaacatcaaaagttttggaataaagtttaagttctaaaatatcaaaagaaaaggaatggagagagta 29722955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 470 - 586
Target Start/End: Complemental strand, 43701666 - 43701550
Alignment:
Q  470 tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 569  Q
    |||||||| ||||||||||||| |||   ||| |||| ||||    |||||||||||||  |||||||||  |||| |||||||||||||||||||||||    
T  43701666 tgtgtttttcaacaagggtaaaattggataaaaaatattaaaaattctaaaacatcaaattttttggaatgaagtttaagttctaaaacatcaaaagaaa 43701567  T
Q  570 aggaatggagggagtat 586  Q
    |||||||||||||||||    
T  43701566 aggaatggagggagtat 43701550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 328 - 378
Target Start/End: Original strand, 19523813 - 19523863
Alignment:
Q  328 ttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatat 378  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19523813 ttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatat 19523863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 362 - 586
Target Start/End: Complemental strand, 33915940 - 33915716
Alignment:
Q  362 gagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaa 461  Q
    ||||||||||| ||||| || |||||| ||||||  ||| |||  |||||||| || |||||||||| || | ||||  ||||||||| |||   |||||    
T  33915940 gagtaattaaaatatatgaatatttgtatgttttgaactaaaaaatccttatt-ataattaaattcatatatgataaggcaaaggtcacaacctatttaa 33915842  T
Q  462 tagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaac 558  Q
    |||||| ||  |||||||| |||||||| |||||||| ||||| || | |||||  ||||||||||||||  ||||| ||||||||| || ||| |||||    
T  33915841 tagttttatggtgtgtttttcaacaagg-taaacttgggaaaaaaaaattaaatatactaaaacatcaaatattttgaaatatagttaaaattcaaaaac 33915743  T
Q  559 atcaaaagaaaaggaatggagggagtat 586  Q
    | ||||||||||  ||||||||||||||    
T  33915742 aacaaaagaaaa-aaatggagggagtat 33915716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 470 - 585
Target Start/End: Original strand, 33379130 - 33379244
Alignment:
Q  470 tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 569  Q
    |||||||| ||||||||||||| ||| || || |||| ||||    |||||||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  33379130 tgtgtttttcaacaagggtaaaattg-gataaaaatattaaaaatcctaaaacatcaaatattttgaaatcaagttgaagttctaaaacatcaaaagaaa 33379228  T
Q  570 aggaatggagggagta 585  Q
    || |||||||||||||    
T  33379229 agaaatggagggagta 33379244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 515 - 570
Target Start/End: Original strand, 49011065 - 49011120
Alignment:
Q  515 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  49011065 actaaaacatcaaatgttttgaaatatagttgaagtcctaaaacatcaaaagaaaa 49011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 302 - 341
Target Start/End: Complemental strand, 46467618 - 46467579
Alignment:
Q  302 atgtaatactccctccattccttttcttttgatgttttag 341  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  46467618 atgtagtactccctccattccttttcttttgatgttttag 46467579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 4405353 - 4405387
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  4405353 ctaaaacatcaaaagaaaaggaatggagggagtat 4405387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 29427442 - 29427408
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  29427442 atactccctccattccttttcttttgatgttttag 29427408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 29890859 - 29890825
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  29890859 ctaaaacatcaaaagaaaaggaatggagggagtat 29890825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 43701550 - 43701584
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  43701550 atactccctccattccttttcttttgatgttttag 43701584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 587
Target Start/End: Complemental strand, 46467367 - 46467333
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||||||||||||||||||||||||    
T  46467367 taaaacatcaaaagaaaaggaatggagggagtata 46467333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 6387969 - 6387936
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  6387969 tactccctccattccttttcttttgatgttttag 6387936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 17904163 - 17904196
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  17904163 tactccctccattccttttcttttgatgttttag 17904196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 17904407 - 17904440
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  17904407 ctaaaacatcaaaagaaaaggaatggagggagta 17904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 26770179 - 26770212
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  26770179 tactccctccattccttttcttttgatgttttag 26770212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 29723414 - 29723381
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  29723414 tactccctccattccttttcttttgatgttttag 29723381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 29723381 - 29723414
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  29723381 ctaaaacatcaaaagaaaaggaatggagggagta 29723414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 37179364 - 37179331
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  37179364 ctaaaacatcaaaagaaaaggaatggagggagta 37179331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 37179608 - 37179575
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  37179608 tactccctccattccttttcttttgatgttttag 37179575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 308 - 340
Target Start/End: Complemental strand, 29891103 - 29891071
Alignment:
Q  308 tactccctccattccttttcttttgatgtttta 340  Q
    |||||||||||||||||||||||||||||||||    
T  29891103 tactccctccattccttttcttttgatgtttta 29891071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 553 - 587
Target Start/End: Original strand, 26770424 - 26770458
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||||||| ||||||||||||||||    
T  26770424 taaaacatcaaaagaaaatgaatggagggagtata 26770458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 307 - 340
Target Start/End: Original strand, 4405108 - 4405141
Alignment:
Q  307 atactccctccattccttttcttttgatgtttta 340  Q
    |||||||||||||| |||||||||||||||||||    
T  4405108 atactccctccatttcttttcttttgatgtttta 4405141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 6387725 - 6387692
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||| ||||    
T  6387725 ctaaaacatcaaaagaaaaggaatggaggaagta 6387692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 33379244 - 33379211
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||| ||||||||||||||||||||    
T  33379244 tactccctccatttcttttcttttgatgttttag 33379211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 308 - 586
Target Start/End: Original strand, 33837729 - 33838007
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  33837729 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 33837828  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33837829 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 33837928  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33837929 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 33838007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 45334276 - 45334553
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  45334276 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 45334375  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  45334376 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgaaaaaacaataa 45334475  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45334476 caaattcactaaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagggagta 45334553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 242; E-Value: 1e-133
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 2508796 - 2509073
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2508796 tactccatcaatttcttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 2508895  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2508896 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttactgtgttttccaacaagggtaaacttgagaaaacaataa 2508995  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2508996 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 2509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 28379224 - 28378947
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  28379224 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtgattaaagtatataaacatttgtgcgttttttacttaaatgt 28379125  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    ||||||||||| ||||||||||||   ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28379124 ccttatttatccttaaattcacatgcgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 28379025  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28379024 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaataatggagggagta 28378947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 308 - 587
Target Start/End: Complemental strand, 25106488 - 25106209
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |    
T  25106488 tactccctccattccttttcttttgatgttttagcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgttttttatttaaattt 25106389  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |    
T  25106388 ccttatttatcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgaaaaaacaatca 25106289  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  25106288 taaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagtata 25106209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 38495472 - 38495749
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  38495472 tactccctccattcattttcttttgatgttttagctcttgacataagttttaaggagtaattaaaatatataaacatttgtgtgttttttacttaaatat 38495571  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38495572 ccttatttatcattaaattcacatgtgataaaccaaatgtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 38495671  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||| |||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||    
T  38495672 taaattcaccaaaacatcaaaaattttagaatatagttgaagttctaaaacatcacaagaaaaagaatggaggaagta 38495749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 308 - 586
Target Start/End: Complemental strand, 9740263 - 9739984
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt-acttaaatg 406  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||| |||||||||    
T  9740263 tactccctccattccttttcttttgatgttttaactcttgacacaagttttagggagtaattaaagtatataaacatttgtgtttttttttacttaaatg 9740164  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    || |||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||    
T  9740163 tcattatttatcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaaggataaacttgagaaagcaata 9740064  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||| ||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  9740063 ataaattcagtaaaacatcaaaagttttgaaatatacatgaagttctaaaacatcaaaagaaaaggaatggagggagtat 9739984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 305 - 580
Target Start/End: Original strand, 13469505 - 13469777
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaa 404  Q
    ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  13469505 taatactccttccattccttttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttc-cttaaa 13469603  T
Q  405 tgtccttatttatcattaaattcacatctaataaac--caaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaac 502  Q
    ||||||||||||||||||||||||||| | ||||||  ||||  ||    | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13469604 tgtccttatttatcattaaattcacatgtgataaacaacaaacatc----caactttaatagtttattgtgttttccaacaagggtaaacttgagaaaac 13469699  T
Q  503 aataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagg 580  Q
    ||| ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13469700 aattataaatttactaaaatatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagg 13469777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 177; E-Value: 6e-95
Query Start/End: Original strand, 323 - 541
Target Start/End: Original strand, 2626253 - 2626472
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  2626253 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtg-tttttatttaaatgtccttatttatcatta 2626351  T
Q  423 aa-ttcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaac-aataataaattcactaaa 520  Q
    || ||||||| | ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  2626352 aatttcacatgtgataaaccaaaggtcacaattactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaaataataaattcactaaa 2626451  T
Q  521 acatcaaaagttttggaatat 541  Q
    |||||||||||||||||||||    
T  2626452 acatcaaaagttttggaatat 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 307 - 588
Target Start/End: Original strand, 32183480 - 32183762
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||  || |||||||||||||||||||||| ||||||| ||||||||||||||||| ||| ||| |||||| ||||||  ||| |||||    
T  32183480 atactccctccattttttatcttttgatgttttagctcttggcacaagtcttaaggagtaattaaagcatagaaatatttgtatgttttggactaaaatg 32183579  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttat--tgtgttttccaacaagggtaaacttgagaaaacaa 504  Q
    ||||||||||| ||||||||||||| | |||| |||||||||  |||| ||| ||||||||||  |||||||||||||||||||||||||| ||||| ||    
T  32183580 tccttatttatgattaaattcacatgtgataagccaaaggtcgcaactcctt-aatagtttatggtgtgttttccaacaagggtaaacttgggaaaaaaa 32183678  T
Q  505 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    || |||||  ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||| |||||||||||    
T  32183679 tattaaatatactaaaacatcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatgaagggagtatat 32183762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 462 - 586
Target Start/End: Original strand, 27793345 - 27793469
Alignment:
Q  462 tagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 561  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  27793345 tagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacattaaaagttttggaatatagttgaagatctaaaacatc 27793444  T
Q  562 aaaagaaaaggaatggagggagtat 586  Q
    ||||||||| ||||||| |||||||    
T  27793445 aaaagaaaatgaatggaaggagtat 27793469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 323 - 463
Target Start/End: Original strand, 27793059 - 27793197
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    |||| |||| |||||||| |||| |||| |||||||||||| ||||||| |||||||| ||||||||| ||||| | |||||| ||||||||||||||||    
T  27793059 ttttttttttatgttttacctctggacataagttttaaggaataattaatgtatataa-catttgtgtattttt-atttaaatatccttatttatcatta 27793156  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaata 463  Q
    |||| |||| | |||||||||| |||| ||||| |||||||    
T  27793157 aatttacatgtgataaaccaaatgtcacaactaatttaata 27793197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 516 - 586
Target Start/End: Complemental strand, 27024502 - 27024432
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  27024502 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagtat 27024432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 518 - 586
Target Start/End: Original strand, 25978969 - 25979037
Alignment:
Q  518 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||||| ||||||||||||||    
T  25978969 aaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggagggagtat 25979037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 517 - 586
Target Start/End: Complemental strand, 8235230 - 8235161
Alignment:
Q  517 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||| |||||| |||| | ||||||| |||||||||||||||||||  ||||||||||||||    
T  8235230 taaaacatcaaatgttttgaaataaaattgaagtcctaaaacatcaaaagaaaataaatggagggagtat 8235161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 588
Target Start/End: Original strand, 27027655 - 27027691
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||||||||||||||||||||||    
T  27027655 ctaaaacatcaaaagaaaaggaatggagggagtatat 27027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 33838009 - 33837973
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  33838009 taatactccctccattccttttcttttgatgttttag 33837973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 523 - 570
Target Start/End: Original strand, 2626667 - 2626714
Alignment:
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  2626667 atcaaaagttttggaatatagttgaagttctaaaatataaaaaaaaaa 2626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 9739983 - 9740018
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  9739983 aatactccctccattccttttcttttgatgttttag 9740018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 27024431 - 27024466
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  27024431 aatactccctccattccttttcttttgatgttttag 27024466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 27027689 - 27027655
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  27027689 atactccctccattccttttcttttgatgttttag 27027655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 2509073 - 2509040
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  2509073 tactccctccattccttttcttttgatgttttag 2509040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 25106455 - 25106488
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  25106455 ctaaaacatcaaaagaaaaggaatggagggagta 25106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 304 - 341
Target Start/End: Complemental strand, 25979040 - 25979003
Alignment:
Q  304 gtaatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  25979040 gtaatactccctccatttcttttcttttgatgttttag 25979003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 28379191 - 28379224
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  28379191 ctaaaacatcaaaagaaaaggaatggagggagta 28379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 33837762 - 33837729
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  33837762 ctaaaacatcaaaagaaaaggaatggagggagta 33837729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 45334309 - 45334276
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  45334309 ctaaaacatcaaaagaaaaggaatggagggagta 45334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 45334553 - 45334520
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  45334553 tactccctccattccttttcttttgatgttttag 45334520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 470 - 550
Target Start/End: Original strand, 3203413 - 3203492
Alignment:
Q  470 tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagt 550  Q
    |||||||| |||||| | |||||||||||||| |||| |||||  ||||||||||||||  ||||  ||||||||||||||    
T  3203413 tgtgtttttcaacaaagataaacttgagaaaa-aatattaaatatactaaaacatcaaatattttaaaatatagttgaagt 3203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 585
Target Start/End: Original strand, 9740231 - 9740263
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||    
T  9740231 taaaacatcaaaagaaaaggaatggagggagta 9740263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 25106210 - 25106244
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||| ||||||||||||||||||||||||||||    
T  25106210 atactctctccattccttttcttttgatgttttag 25106244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 417
Target Start/End: Original strand, 25978717 - 25978827
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||| |||||||| |||||||||||||||||||| |  |  ||||||| ||||||| | ||| |||||||| || | ||||  | |||| ||| |||||    
T  25978717 atactacctccatttcttttcttttgatgttttaggtgattgcacaagtattaaggaatcatttaagtatatgaataattgtaaggttttgactaaaatg 25978816  T
Q  407 tccttatttat 417  Q
     ||||||||||    
T  25978817 cccttatttat 25978827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 586
Target Start/End: Complemental strand, 13469540 - 13469507
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||| |||||||    
T  13469540 taaaacatcaaaagaaaaggaatggaaggagtat 13469507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 305 - 346
Target Start/End: Complemental strand, 27793471 - 27793430
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttagctctt 346  Q
    ||||||||| ||||||| ||||||||||||||||||| ||||    
T  27793471 taatactccttccattcattttcttttgatgttttagatctt 27793430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 38495505 - 38495472
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||| ||||||||||||||    
T  38495505 ctaaaacatcaaaagaaaatgaatggagggagta 38495472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 259; Significance: 1e-144; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 307 - 585
Target Start/End: Complemental strand, 29875232 - 29874954
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29875232 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 29875133  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29875132 tccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 29875033  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29875032 ataaattcactaaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 29874954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 12398946 - 12399223
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  12398946 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 12399045  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
     ||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12399046 tcttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 12399145  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12399146 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 12399223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 307 - 585
Target Start/End: Complemental strand, 34208816 - 34208538
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||    
T  34208816 atactccctccattcctttttttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatg 34208717  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34208716 tccttatttatcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 34208617  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34208616 acaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 34208538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 307 - 585
Target Start/End: Complemental strand, 23090576 - 23090298
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  23090576 atactccctccattccttttcttttgatgttttacctcttgacacaagttttaaggagtaattaaagtatacaaacatttgtgtattttttacttaaatg 23090477  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    | ||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23090476 ttcttatttatcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 23090377  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    | ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23090376 acaaattcactaaaacatcaaaaattttggaatacagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 23090298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 314 - 585
Target Start/End: Complemental strand, 4145965 - 4145694
Alignment:
Q  314 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttat 413  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  4145965 ctccattccttttcttttgatgttttagttcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatgtccttat 4145866  T
Q  414 ttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatt 513  Q
    |||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  4145865 ttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttaagaaaacaataacaaatt 4145766  T
Q  514 cactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4145765 cactaaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagcgagta 4145694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 4695162 - 4695439
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4695162 tactccctccatttcttttcttttgatgttatagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 4695261  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||| ||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4695262 ccttatttattattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 4695361  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
     ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  4695362 caaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaaaatcaaaagaaaaggaatgaagggagta 4695439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 200; E-Value: 1e-108
Query Start/End: Original strand, 323 - 586
Target Start/End: Complemental strand, 3077859 - 3077596
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  3077859 ttttttttttatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtattttttacttaaatgtccttatttatcatta 3077760  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||||| || | |||||| ||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||    
T  3077759 aattcatatgtgataaacaaaatgtcacaactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataacaaattcactaaaac 3077660  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||  |||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  3077659 atcaaaagttttaaaatatagttgaaattctaaaacatcaaaagaaaatgaatggagggagtat 3077596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 308 - 570
Target Start/End: Original strand, 42757805 - 42758072
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||    
T  42757805 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaac-gttgtgtg-tttttacttaaatgt 42757902  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaagg-------tcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaa 500  Q
      |||||||||||||||||||||| | |||||||||| |       ||||||||||||||||||||||| |||||||||||||||| |||||||||||||    
T  42757903 ttttatttatcattaaattcacatgtgataaaccaaatgtcataactcataactactttaatagtttatcgtgttttccaacaaggataaacttgagaaa 42758002  T
Q  501 acaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |||| ||||    
T  42758003 acaataataaattcactaaaacatcaaaagttttgaaaaatagttgaagttctaaaacataaaaaaaaaa 42758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 308 - 520
Target Start/End: Original strand, 22645909 - 22646121
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |    
T  22645909 tactccctcaatttcttttcttttaatgttttagctcttggcacaagttttaaggagtaattaaagtatataaatatttgtgtgttttttactaaaatat 22646008  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||    
T  22646009 ccttatttatcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaaggttaaacttgagaaaacaataa 22646108  T
Q  508 taaattcactaaa 520  Q
    |||||||||||||    
T  22646109 taaattcactaaa 22646121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 337 - 570
Target Start/End: Original strand, 12096231 - 12096466
Alignment:
Q  337 tttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatctaat 436  Q
    ||||||||||||||||||  ||||||||||||||||  ||||||  |||||| | || |  ||| |||||||||| ||||| ||||||||| ||| | ||    
T  12096231 tttagctcttgacacaagacttaaggagtaattaaatcatataagtatttgtatcttatggactaaaatgtccttctttataattaaattcgcatgtgat 12096330  T
Q  437 aaaccaaaggtcataactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaattc-actaaaacatcaaaagtt 532  Q
    ||  ||| |||||  |||| ||||||||||| ||  |||||||| ||||||| ||| ||||||||||| |||| |||| |  | |||||||||||| |||    
T  12096331 aagtcaa-ggtcacgacta-tttaatagttttatggtgtgtttttcaacaagagtacacttgagaaaagaatattaaaatatattaaaacatcaaatgtt 12096428  T
Q  533 ttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||||||||||||||||| |||||||||||||||||||    
T  12096429 ttggaatatagttgaagtcctaaaacatcaaaagaaaa 12096466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 328 - 586
Target Start/End: Complemental strand, 19574943 - 19574685
Alignment:
Q  328 ttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattc 427  Q
    ||||||||||||| |||||| ||||||| ||||| ||||||||||||||||||| |||||| | ||||    | ||| ||  |||||||| |||||||||    
T  19574943 ttttgatgttttaactcttggcacaagtcttaagaagtaattaaagtatataaatatttgtattttttagggtaaaaagtttttatttataattaaattc 19574844  T
Q  428 acatctaataaaccaaaggtcataactactttaatagtttat--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatc 525  Q
    ||||   ||||  |||| ||||||| |  ||||| |||||||  ||| |||| |||||||||| | |||| ||||| |||| |||||  | ||||||||     
T  19574843 acatacgataagtcaaatgtcataagtcatttaaaagtttatggtgtctttttcaacaagggtgaccttgggaaaa-aatattaaatatattaaaacatt 19574745  T
Q  526 aaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||  ||||| ||| || ||||||| |||||||||||||||| ||  ||||||||||||||    
T  19574744 aaatattttgaaatttaattgaagtcctaaaacatcaaaagacaa-aaatggagggagtat 19574685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 585
Target Start/End: Original strand, 41610625 - 41610694
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||    
T  41610625 ctaaaacatcaaaagttttggaataaagtttaagttctaaaacatcaaaagaaaagaaatggagagagta 41610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 585
Target Start/End: Complemental strand, 42793109 - 42793040
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||    
T  42793109 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagtgagta 42793040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 345 - 564
Target Start/End: Complemental strand, 22528244 - 22528023
Alignment:
Q  345 ttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatctaataaaccaaa 444  Q
    |||||||||||||||||  |||||||||||||| ||| |||||| ||||||  | | |||| |  |||||||| |||||||||| || | |||| |||||    
T  22528244 ttgacacaagttttaagc-gtaattaaagtatagaaatatttgtatgttttggattaaaatatttttatttatgattaaattcatatgtgataagccaaa 22528146  T
Q  445 ggtcataactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatat 541  Q
    ||||| ||||  ||||||||||| ||  |||||||| |||||| |||||| |||  | || | || |||||  ||||||||||||||  ||||||| |||    
T  22528145 ggtcacaactcttttaatagttttatggtgtgtttttcaacaaaggtaaatttggaataaaattattaaatgtactaaaacatcaaatattttggagtat 22528046  T
Q  542 agttgaagttctaaaacatcaaa 564  Q
    | ||||||| |||||| ||||||    
T  22528045 aattgaagtcctaaaatatcaaa 22528023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 552 - 590
Target Start/End: Original strand, 42793562 - 42793600
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatatgt 590  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42793562 ctaaaacatcaaaagaaaaggaatggagggagtatatgt 42793600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 326 - 431
Target Start/End: Complemental strand, 4939781 - 4939676
Alignment:
Q  326 tcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaat 425  Q
    ||||||||||||||| ||||||||| |||| ||||  |||||||||| |||||||  |||||| ||||||  | | ||| | | |||||||| |||||||    
T  4939781 tcttttgatgttttaactcttgacataagtcttaataagtaattaaaatatataagtatttgtatgttttggattaaaaagcctttatttataattaaat 4939682  T
Q  426 tcacat 431  Q
    ||||||    
T  4939681 tcacat 4939676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 518 - 582
Target Start/End: Complemental strand, 4434847 - 4434783
Alignment:
Q  518 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||  | ||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  4434847 aaaacatcaaatatcttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggaggga 4434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 588
Target Start/End: Original strand, 29875198 - 29875234
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||||||||||||||||||||||    
T  29875198 ctaaaacatcaaaagaaaaggaatggagggagtatat 29875234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 300 - 340
Target Start/End: Original strand, 41610365 - 41610405
Alignment:
Q  300 taatgtaatactccctccattccttttcttttgatgtttta 340  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  41610365 taatctaatactccctccattccttttcttttgatgtttta 41610405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 587
Target Start/End: Original strand, 23090543 - 23090577
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||||||||||||||||||||||||    
T  23090543 taaaacatcaaaagaaaaggaatggagggagtata 23090577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 42793596 - 42793562
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  42793596 atactccctccattccttttcttttgatgttttag 42793562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 12398979 - 12398946
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  12398979 ctaaaacatcaaaagaaaaggaatggagggagta 12398946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 12399223 - 12399190
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  12399223 tactccctccattccttttcttttgatgttttag 12399190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 23090298 - 23090331
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  23090298 tactccctccattccttttcttttgatgttttag 23090331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 34208538 - 34208571
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  34208538 tactccctccattccttttcttttgatgttttag 34208571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 586
Target Start/End: Complemental strand, 41610405 - 41610372
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||||||||||||    
T  41610405 taaaacatcaaaagaaaaggaatggagggagtat 41610372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 42757838 - 42757805
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  42757838 ctaaaacatcaaaagaaaaggaatggagggagta 42757805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 326 - 425
Target Start/End: Complemental strand, 32144385 - 32144285
Alignment:
Q  326 tcttttgatgttttagctctt-gacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaa 424  Q
    ||||||||||||| ||||||| || | |||| ||||||||||||||| ||||||||| |||| | |||||   ||| ||| |||||| ||||| ||||||    
T  32144385 tcttttgatgtttaagctcttagatataagtcttaaggagtaattaacgtatataaatatttttatgtttcgaactaaaaagtccttgtttataattaaa 32144286  T
Q  425 t 425  Q
    |    
T  32144285 t 32144285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 306 - 341
Target Start/End: Original strand, 3077595 - 3077630
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||| |||||||||||||||||||    
T  3077595 aatactccctccattcattttcttttgatgttttag 3077630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 516 - 587
Target Start/End: Complemental strand, 8718094 - 8718023
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||  ||||| |||| ||||||| |  ||||| ||||||||||||| |||||||||| ||||    
T  8718094 ctaaaacatcaaatattttgaaataaagttgaaatcttaaaatatcaaaagaaaagaaatggagggattata 8718023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 587
Target Start/End: Original strand, 34208782 - 34208817
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||| |||||||||||||||||||||    
T  34208782 ctaaaacatcaaaaaaaaaggaatggagggagtata 34208817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 536 - 570
Target Start/End: Original strand, 594328 - 594362
Alignment:
Q  536 gaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||||||||||||||| ||||||||||||||||||    
T  594328 gaatatagttgaagttttaaaacatcaaaagaaaa 594362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 4145694 - 4145727
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||| ||||||||||||||||||||||||||||    
T  4145694 tactcgctccattccttttcttttgatgttttag 4145727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 29874954 - 29874987
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||| |||||||||||||||||||    
T  29874954 tactccctccattctttttcttttgatgttttag 29874987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 42793040 - 42793073
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||| ||||||||||||||||||||||||||||    
T  42793040 tactcactccattccttttcttttgatgttttag 42793073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 255; Significance: 1e-141; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 255; E-Value: 1e-141
Query Start/End: Original strand, 308 - 586
Target Start/End: Complemental strand, 47669396 - 47669118
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  47669396 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 47669297  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47669296 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 47669197  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
     ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47669196 caaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 47669118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 307 - 585
Target Start/End: Complemental strand, 46220537 - 46220259
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  46220537 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaattg 46220438  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46220437 tccttatttatcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 46220338  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  46220337 acaaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggagta 46220259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 311 - 585
Target Start/End: Complemental strand, 9831777 - 9831503
Alignment:
Q  311 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcct 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||    
T  9831777 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgttct 9831678  T
Q  411 tatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataa 510  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  9831677 tatttatcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaagggtaaacttgagaaaataataacaa 9831578  T
Q  511 attcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  9831577 attcactaaaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaaggaatggagggagta 9831503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 307 - 585
Target Start/End: Original strand, 10737700 - 10737978
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||    
T  10737700 atactccctccattccttttcttttgatgttttagctcttgatacaagttttaaggagcaattaaagtatataaatatttgtgtgttttttacttaaatg 10737799  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    |||||||||||||||||||||| || | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10737800 tccttatttatcattaaattcagatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 10737899  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10737900 ataaattcactaaaacatcaaaagttttagaatatagttgaagttctaaaacattaaaagaaaaggaatgaagggagta 10737978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 306 - 586
Target Start/End: Complemental strand, 48565096 - 48564817
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  48565096 aatactccctccattccttttcttttgatgttttggcttttgacacaagttttaaggagtaattaaagtatataaacacttgtgtgttttttacttaaat 48564997  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
    |||||||||||||||||||||||||| | |||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48564996 gtccttatttatcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgagaaaacaat 48564897  T
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||    
T  48564896 aataaattcactaaaacatcaaaatttttggaatatagttgaagttttaaaacatc-aaagaaaagtaatggagggagtat 48564817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 310 - 585
Target Start/End: Original strand, 3384597 - 3384870
Alignment:
Q  310 ctccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcc 409  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  3384597 ctccctccattctttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacgtttgtgtgttttttacttaaatgttt 3384696  T
Q  410 ttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataata 509  Q
    |||||||||||||||||||||| | ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3384697 ttatttatcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataata 3384796  T
Q  510 aattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||  | |||||||| |||||||||||||||||||||| ||||| ||||||||    
T  3384797 aattcactaaaacatcaaaagttttg--aaatagttgaggttctaaaacatcaaaagaaaaagaatgaagggagta 3384870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 323 - 587
Target Start/End: Complemental strand, 4817531 - 4817267
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    |||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  4817531 ttttttttttatgttttaactcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtgttttacttaaatgtccttatttatcatta 4817432  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    ||||||||| | |||||| |||  ||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  4817431 aattcacatgtgataaactaaatatcacaactaccttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaatgataaattcactaaaac 4817332  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4817331 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 4817267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 308 - 586
Target Start/End: Complemental strand, 4055761 - 4055483
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||| | ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  4055761 tactcccttcgttctttttcttttgatgttttaactcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttcacttaaatgt 4055662  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    | |||||||||||||||||||||| | |||||||||| || | ||||||||||| |||  |||||||||||||| |||||||||||||||||||||||||    
T  4055661 ctttatttatcattaaattcacatgtgataaaccaaatgttacaactactttaacagtgaattgtgttttccaataagggtaaacttgagaaaacaataa 4055562  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055561 ttaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 4055483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 323 - 585
Target Start/End: Complemental strand, 18127112 - 18126851
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||||    
T  18127112 tttttttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtgttttacttaaatattcttttttatcatta 18127013  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    ||||||||| | |||||||||| |||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18127012 aattcacatgtgataaaccaaaagtcacaactactt-aatagtttgttgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 18126914  T
Q  523 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18126913 atcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18126851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 308 - 570
Target Start/End: Complemental strand, 8889720 - 8889457
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt-acttaaatg 406  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||    
T  8889720 tactccctccattccttttattttgatgttttagctcttgacacaagttttaagaagtaattaaagtatatatacatttgtgtgtttttttacttaaatg 8889621  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    || |||||||||||||||||||||| | |||||| ||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8889620 tcattatttatcattaaattcacatgtgataaactaaaagtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaata 8889521  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8889520 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaa 8889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 169; E-Value: 3e-90
Query Start/End: Original strand, 357 - 584
Target Start/End: Complemental strand, 7414436 - 7414208
Alignment:
Q  357 ttaaggagtaattaaagtatataaacatttgtgtgtttttt-acttaaatgtccttatttatcattaaattcacatctaataaaccaaaggtcataacta 455  Q
    ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||||| | |||||||||| |||| |||||    
T  7414436 ttaaggagtaattaaagtatataaatatttgtgtgtttttttacttaaatatccttatttatcattaaattcacatatgataaaccaaatgtcacaacta 7414337  T
Q  456 ctttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaa 555  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||||    
T  7414336 ctttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaaaatttaaaatatagttgaagttctaa 7414237  T
Q  556 aacatcaaaagaaaaggaatggagggagt 584  Q
    |||||||||| |||| |||||||||||||    
T  7414236 aacatcaaaaaaaaatgaatggagggagt 7414208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 308 - 565
Target Start/End: Complemental strand, 39241429 - 39241172
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||| ||||||| ||||||||||||||||||||||||||||| || ||||||| ||||||||||||||||||| |||||||||||||| ||  |||| |    
T  39241429 tactctctccatttcttttcttttgatgttttagctcttgacataaattttaagaagtaattaaagtatataaatatttgtgtgtttttgaccaaaatat 39241330  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggt-aaacttgagaaaacaata 506  Q
     ||||||||||||||||||||||| | ||||| |||| |||| ||||||||||||||||||| ||||||| ||||||| || |||||||| | |||||||    
T  39241329 tcttatttatcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaagagtaaaacttgatacaacaata 39241230  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 565  Q
    ||||||||||| ||||| ||||||||||| |||||||||||| ||||||||||| ||||    
T  39241229 ataaattcactgaaacaacaaaagttttgaaatatagttgaa-ttctaaaacattaaaa 39241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 309 - 446
Target Start/End: Original strand, 1236071 - 1236208
Alignment:
Q  309 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 408  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1236071 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 1236170  T
Q  409 cttatttatcattaaattcacatctaataaaccaaagg 446  Q
    ||||||||||||||||||||||| | ||||| ||||||    
T  1236171 cttatttatcattaaattcacatgtgataaatcaaagg 1236208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 483 - 585
Target Start/End: Original strand, 1236205 - 1236307
Alignment:
Q  483 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  1236205 aagggtaaacttgagaaaacaataataaattcactaaaccatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaatgaatggaggga 1236304  T
Q  583 gta 585  Q
    |||    
T  1236305 gta 1236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 305 - 431
Target Start/End: Original strand, 37875724 - 37875849
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaa 404  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| ||| |||||| || |||| ||| |||    
T  37875724 taatactccctccatttcttttcttttgatgttttagctcttggcacaagtcttaaggaataattaatgtatagaaatatttgtatg-ttttgactaaaa 37875822  T
Q  405 tgtccttatttatcattaaattcacat 431  Q
    | |||||||||||||||||||||||||    
T  37875823 tatccttatttatcattaaattcacat 37875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 352 - 562
Target Start/End: Complemental strand, 26842673 - 26842462
Alignment:
Q  352 aagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatctaataaaccaaaggtcata 451  Q
    |||| ||||||||||||||||||||| ||| || | | ||||||  ||| |||| ||||||||||| ||||||||||||| | ||||  |||| |||| |    
T  26842673 aagtcttaaggagtaattaaagtatagaaatatgtatatgttttagactaaaatatccttatttatgattaaattcacatgtgataagtcaaatgtcaca 26842574  T
Q  452 actactttaatagtttat---tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaa 548  Q
    | | ||| ||||||||     |||||||| |||||||| ||||||||| ||||  ||| |||||  ||||||||||||||  ||||| ||||||||||||    
T  26842573 atttcttgaatagttttacgatgtgtttttcaacaaggataaacttgaaaaaa--atattaaatatactaaaacatcaaatattttgaaatatagttgaa 26842476  T
Q  549 gttctaaaacatca 562  Q
    ||||||||||||||    
T  26842475 gttctaaaacatca 26842462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 506 - 586
Target Start/End: Original strand, 1749521 - 1749601
Alignment:
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| |||||    
T  1749521 aataaattcactaaaacatcaaaagttttggtatataattaaagttctaaaacatcaaaagaaaaggaatagaggaagtat 1749601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 313 - 570
Target Start/End: Original strand, 49112282 - 49112535
Alignment:
Q  313 cctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcctta 412  Q
    ||||||||  || |||||| ||||||||| ||||   | |||| |||| |||||||||||||||| ||| |||||| ||||||  ||| |||| ||||||    
T  49112282 cctccattttttatcttttcatgttttagttctt---agaagtcttaaagagtaattaaagtataaaaatatttgtatgttttggactaaaatatcctta 49112378  T
Q  413 tttatcattaaattcacatctaataaaccaaaggtcataactactttaatagttt---attgtgttttccaacaagggtaaacttgagaaaacaataata 509  Q
    ||||| ||||||||||||| |  ||| | ||||||||||||   |||||||||||     |||||||| ||||||||||||| ||   ||||||||  ||    
T  49112379 tttatgattaaattcacatgtggtaagctaaaggtcataacacttttaatagttttaaggtgtgtttttcaacaagggtaaatttagaaaaacaatgtta 49112478  T
Q  510 aattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||  ||||||||||||||  ||||  ||||||||| |||||    |||||||||||||||    
T  49112479 aatatactaaaacatcaaatattttaaaatatagttaaagtt----aacatcaaaagaaaa 49112535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 585
Target Start/End: Complemental strand, 33020275 - 33020206
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||||||||||    
T  33020275 ctaaaacatcaaaagttttggaaaaaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 33020206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 586
Target Start/End: Original strand, 33846758 - 33846936
Alignment:
Q  413 tttatcattaaattcacatctaataaaccaaaggtcataactactttaatagttt-at----tgtgttttccaacaagggtaaacttga-gaaaacaata 506  Q
    ||||| ||||||||||||| ||||||  |||| |||| ||||  ||||||||||| ||    ||||||||  ||||||||||||||||| ||||| || |    
T  33846758 tttataattaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaa 33846857  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
     |||||  ||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  ||||||||||||||    
T  33846858 ttaaatatactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagtat 33846936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 413 - 586
Target Start/End: Complemental strand, 33947220 - 33947042
Alignment:
Q  413 tttatcattaaattcacatctaataaaccaaaggtcataactactttaatagttt-at----tgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    ||||| ||||||||||||| ||||||  |||| |||| ||||  ||||||||||| ||    ||||||||  |||||||||||||||||| ||| || ||    
T  33947220 tttataattaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaa 33947121  T
Q  508 t-aaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    | ||||  ||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  ||||||||||||||    
T  33947120 ttaaatatactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagtat 33947042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 4055481 - 4055517
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  4055481 taatactccctccattccttttcttttgatgttttag 4055517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 47669116 - 47669152
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  47669116 taatactccctccattccttttcttttgatgttttag 47669152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 4817268 - 4817302
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  4817268 atactccctccattccttttcttttgatgttttag 4817302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 10737734 - 10737700
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  10737734 ctaaaacatcaaaagaaaaggaatggagggagtat 10737700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 46220503 - 46220537
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  46220503 ctaaaacatcaaaagaaaaggaatggagggagtat 46220537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 9831503 - 9831536
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  9831503 tactccctccattccttttcttttgatgttttag 9831536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 18126851 - 18126884
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  18126851 tactccctccattccttttcttttgatgttttag 18126884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 33020206 - 33020239
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  33020206 tactccctccattccttttcttttgatgttttag 33020239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 47669363 - 47669396
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  47669363 ctaaaacatcaaaagaaaaggaatggagggagta 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 584
Target Start/End: Complemental strand, 1236103 - 1236071
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagt 584  Q
    |||||||||||||||||||||||||||||||||    
T  1236103 ctaaaacatcaaaagaaaaggaatggagggagt 1236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 554 - 586
Target Start/End: Original strand, 48565063 - 48565095
Alignment:
Q  554 aaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||    
T  48565063 aaaacatcaaaagaaaaggaatggagggagtat 48565095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 587
Target Start/End: Original strand, 33023428 - 33023463
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    ||||||| ||||||||||||||||||||||||||||    
T  33023428 ctaaaacgtcaaaagaaaaggaatggagggagtata 33023463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 457 - 528
Target Start/End: Complemental strand, 37875920 - 37875849
Alignment:
Q  457 tttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaa 528  Q
    ||||||||| |  ||| |||| |||||||| ||||||||||||||||| | |||||  ||||||||||||||    
T  37875920 tttaatagtatggtgtatttttcaacaaggataaacttgagaaaacaacattaaatatactaaaacatcaaa 37875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 582
Target Start/End: Original strand, 9831747 - 9831777
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||    
T  9831747 ctaaaacatcaaaagaaaaggaatggaggga 9831777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 33023462 - 33023428
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||| |||||||    
T  33023462 atactccctccattccttttcttttgacgttttag 33023428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 37875760 - 37875726
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||| ||||||||||||||    
T  37875760 ctaaaacatcaaaagaaaagaaatggagggagtat 37875726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 1236307 - 1236274
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||| |||||||||||||||||||    
T  1236307 tactccctccattcattttcttttgatgttttag 1236274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 8889687 - 8889720
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||| |||||||||||||||||||    
T  8889687 ctaaaacatcaaaataaaaggaatggagggagta 8889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 46220259 - 46220292
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||| ||||||||||||||||||||||||    
T  46220259 tactccctctattccttttcttttgatgttttag 46220292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 248; Significance: 1e-137; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-137
Query Start/End: Original strand, 308 - 583
Target Start/End: Complemental strand, 15234032 - 15233757
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||    
T  15234032 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtatattttttacttaaatgt 15233933  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15233932 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 15233833  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 583  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15233832 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggag 15233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 308 - 588
Target Start/End: Original strand, 43040849 - 43041129
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||| ||||||||| |||||||| ||||||    
T  43040849 tactccctccattccttttcttttgatgttttagctattggcacaagttttaaggagtaattaaaatatataaatatttgtgtgatttttactaaaatgt 43040948  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  43040949 ccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataa 43041048  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43041049 taaattcactaaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagtatat 43041129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 308 - 586
Target Start/End: Complemental strand, 41252693 - 41252414
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttt-acttaaatg 406  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  41252693 tactctctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttttttacttaaatg 41252594  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||| |||| |||| |||||||||||||||||||||| ||||||||||||| |||||||||||| ||||||    
T  41252593 tccttatttatcattaaattcacatgtgataaaacaaatgtcacaactactttaatagtttattgtattttccaacaaggataaacttgagaacacaata 41252494  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  41252493 ataaattcactaaaacatcaaaagttttggaatatatttgaagttctaaaacataaaaagaaaaggaatggagggagtat 41252414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 223; E-Value: 1e-122
Query Start/End: Original strand, 312 - 586
Target Start/End: Original strand, 35792911 - 35793184
Alignment:
Q  312 ccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcctt 411  Q
    |||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  35792911 cccttcattccttttcttttgatgttttaactcttgacataagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcctg 35793010  T
Q  412 atttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaa 511  Q
    ||||||||||||||||||||   |||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35793011 atttatcattaaattcacatgcgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttga-aaaacaataataaa 35793109  T
Q  512 ttcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35793110 ttctctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagtat 35793184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 308 - 585
Target Start/End: Original strand, 44104546 - 44104833
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtg-ttttttacttaaatg 406  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44104546 tactccctccattccttttcttttgatgttttaacttttgacataagttttaaggagtaattaaagtatataaacatttgtgtgtttttttacttaaatg 44104645  T
Q  407 tccttatttatcattaaattcacatctaataaacc--aaaggtcataactactttaatagtttattgtgttttccaac-------aagggtaaacttgag 497  Q
    || |||||||||||||||||||||| | |||||||  |||||||| |||||| |||||||||||||||||||||||||       |||||||||||||||    
T  44104646 tctttatttatcattaaattcacatgtgataaaccataaaggtcacaactaccttaatagtttattgtgttttccaacaatttataagggtaaacttgag 44104745  T
Q  498 aaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  44104746 aaaataataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaggaacggagggagta 44104833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 323 - 585
Target Start/End: Complemental strand, 41643156 - 41642891
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    ||||||||||||||||||  ||||| ||||  |||||| |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  41643156 ttttcttttgatgttttaattcttggcacacattttaaagagtaattaaagtatataaatatttgtgtgttttttactaaaatgtccttatttatcatta 41643057  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaac 522  Q
    |||| |||| | ||||| ||||||||| ||||||||||||||||||| ||||||||||  || |||||||||||||||||||||||||||||||||||||    
T  41643056 aattaacatgtgataaatcaaaggtcacaactactttaatagtttatggtgttttccagaaaaggtaaacttgagaaaacaataataaattcactaaaac 41642957  T
Q  523 atcaaaagttttggaa--tatagttgaagttct-aaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||  |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  41642956 atcaaaagttttggaatatatagttgaaattctaaaaacatcaaaagaaaagaaatggagggagta 41642891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 327 - 570
Target Start/End: Original strand, 31903400 - 31903641
Alignment:
Q  327 cttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaatt 426  Q
    ||||||||||||||||| ||| ||| | ||||||||||||||||||||||||||  |||||||||||||| ||  |||||||||||||||||||||||||    
T  31903400 cttttgatgttttagcttttggcacgacttttaaggagtaattaaagtatataat-atttgtgtgtttttgaccaaaatgtccttatttatcattaaatt 31903498  T
Q  427 cacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatca 526  Q
    ||||| | |||| |||||||||| ||||||||||||||||||| ||||||||||| |||||||||| ||| |||||||||||||||| ||||||||||||    
T  31903499 cacatgtgataatccaaaggtcacaactactttaatagtttatggtgttttccaataagggtaaac-tgataaaacaataataaatttactaaaacatca 31903597  T
Q  527 aaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||  ||||||||||| |||||||||||||||||||||| ||||    
T  31903598 aaaaatttggaatatatttgaagttctaaaacatcaaaaaaaaa 31903641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 388 - 587
Target Start/End: Complemental strand, 31296278 - 31296081
Alignment:
Q  388 tgtgttttttacttaaatgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaaggg 487  Q
    ||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||  ||| ||||||||||||||||||||||||||| |||||| ||    
T  31296278 tgtgtttttt--ttaaatgtccttatttatcattaaattcacatgtgataaaccaaatatcacaactactttaatagtttattgtgtttttcaacaaagg 31296181  T
Q  488 taaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtata 587  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  31296180 taaatttgagaaaacaataataaattcactaaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaagaatggaaggagtata 31296081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 308 - 570
Target Start/End: Complemental strand, 21727949 - 21727684
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||| ||  || |||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||| |||||| ||||||  ||| ||||||    
T  21727949 tactccctccgttttttatcttttgatgttttagctcttggcacaagtcttaaggagtaattgaagtatataaatatttgtatgttttggactaaaatgt 21727850  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatag-tttattgtg--ttttccaacaagggtaaacttgagaaaacaa 504  Q
    |||| ||||| ||||||||||||| | ||||  |||| | || |||| ||||||||| |||||||||  |||| ||||||||||||| ||| | ||| ||    
T  21727849 ccttgtttatgattaaattcacatgtgataaggcaaatgccacaactcctttaatagttttattgtgtttttttcaacaagggtaaatttggggaaaaaa 21727750  T
Q  505 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    || ||  |  || |||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  21727749 tattagttataccaaaacatcaaatattttgaaatatagttgaagttctaaaacatcaaaagaaaa 21727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 516 - 585
Target Start/End: Original strand, 10118660 - 10118729
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||    
T  10118660 ctaaaacatcaaaagttttggaataaagtttaagctctaaaatatcaaaagaaaaggaatggagggagta 10118729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 552 - 588
Target Start/End: Complemental strand, 10112372 - 10112336
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||||||||||||||||||||||    
T  10112372 ctaaaacatcaaaagaaaaggaatggagggagtatat 10112336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 10112338 - 10112372
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  10112338 atactccctccattccttttcttttgatgttttag 10112372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 516 - 586
Target Start/End: Complemental strand, 36963200 - 36963130
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||  ||||| |||| |||| || ||||||||||| |||||||||||||| ||| ||||||    
T  36963200 ctaaaacatcaaattttttgaaataaagtttaaattctaaaacattaaaagaaaaggaatagagcgagtat 36963130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 15233999 - 15234032
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  15233999 ctaaaacatcaaaagaaaaggaatggagggagta 15234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 43040882 - 43040849
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  43040882 ctaaaacatcaaaagaaaaggaatggagggagta 43040849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 307 - 340
Target Start/End: Complemental strand, 43041127 - 43041094
Alignment:
Q  307 atactccctccattccttttcttttgatgtttta 340  Q
    ||||||||||||||||||||||||||||||||||    
T  43041127 atactccctccattccttttcttttgatgtttta 43041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 553 - 585
Target Start/End: Complemental strand, 44104578 - 44104546
Alignment:
Q  553 taaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||    
T  44104578 taaaacatcaaaagaaaaggaatggagggagta 44104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 35793184 - 35793150
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||| |||||||||||||||||||    
T  35793184 atactccctccattctttttcttttgatgttttag 35793150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 41252414 - 41252448
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||| |||||||||    
T  41252414 atactccctccattccttttctttttatgttttag 41252448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 10118729 - 10118696
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||| ||||||    
T  10118729 tactccctccattccttttcttttgatattttag 10118696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 44104833 - 44104800
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    |||||||||| |||||||||||||||||||||||    
T  44104833 tactccctccgttccttttcttttgatgttttag 44104800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 247; Significance: 1e-136; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 247; E-Value: 1e-136
Query Start/End: Original strand, 308 - 586
Target Start/End: Complemental strand, 32274711 - 32274433
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  32274711 tactccctccattcattttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgt 32274612  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    || |||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32274611 ccgtatttatcattaaagtcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 32274512  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32274511 caaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 32274433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 307 - 586
Target Start/End: Original strand, 27312113 - 27312394
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctctt-gacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttt-ttacttaaa 404  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  27312113 atactccctccattccttttcttttgatgttttagctcttagacacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttttacttaaa 27312212  T
Q  405 tgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa 504  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27312213 tgtccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa 27312312  T
Q  505 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27312313 taataaattcactaaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 27312394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 182; E-Value: 6e-98
Query Start/End: Original strand, 307 - 524
Target Start/End: Complemental strand, 2543359 - 2543142
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  2543359 atactccctccattcgttttcttttgatgttttagctcttgacacaagttttaagaagtaattaaagtatataaacatctgtgtgttttttacttaaatg 2543260  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    || |||||||||||||||||||||| | |||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2543259 tctttatttatcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaata 2543160  T
Q  507 ataaattcactaaaacat 524  Q
    ||||||||||||||||||    
T  2543159 ataaattcactaaaacat 2543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 308 - 586
Target Start/End: Original strand, 29452542 - 29452821
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||| |||  |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| ||    
T  29452542 tactccctctatttattttcttttgatgttttaactcttggcacaagttttaaggagtaattaaagtatataaatatttgtgtgtttttgactaaaaagt 29452641  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa-ta 506  Q
    | |||||||||||||||||||||| | ||||| ||||||||| ||||| ||||||||||||| ||||||||||||||| |||||||||||||||||| ||    
T  29452642 cattatttatcattaaattcacatgtgataaatcaaaggtcacaactattttaatagtttatggtgttttccaacaagtgtaaacttgagaaaacaagta 29452741  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||| |  ||| ||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  29452742 ataaattcactaaaacatcaagaaatttagaatatagttgaagttctaaaacatcagaagaaaagaaatggagggagtat 29452821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 307 - 585
Target Start/End: Original strand, 31170989 - 31171267
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||| ||||||||||||| |||||| ||||  ||||| ||||||||||||||||||||||||||| |||||||| ||||| | | ||||     
T  31170989 atactccctccatttcttttcttttgatattttagttcttagcacaaattttaaggagtaattaaagtatataaatatttgtgtatttttgattaaaata 31171088  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||||||  ||||||||||| || | |||||||||||||||||||    
T  31171089 tccttatttatcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttaaggtgttttccaataaagataaacttgagaaaacaata 31171188  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||| |||||| || ||||||||||| | ||||| ||||||| |||||||||||||| |||||||||||||    
T  31171189 ataaattcactacaacatctaatgttttggaatacatttgaatttctaaatcatcaaaagaaaagaaatggagggagta 31171267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 402 - 583
Target Start/End: Original strand, 8504796 - 8504977
Alignment:
Q  402 aaatgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaa 501  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  8504796 aaatgtccttatttatcattaaattcacatataataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacctgagaaaa 8504895  T
Q  502 caataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 583  Q
     ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  8504896 taataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggag 8504977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 306 - 586
Target Start/End: Original strand, 7156235 - 7156503
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    ||||| |||||| || |||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||| ||| ||| ||||    
T  7156235 aataccccctccgtttctttgcttttgatgttttagctcttgatacaagttttaaggaataattaaagtatataaatatttgtgtgtctttgactaaaat 7156334  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
     ||||||||||||||||||||||||| | |||||||||| |||| || |||||||||||||||| |||||||||||||            ||||||||||    
T  7156335 atccttatttatcattaaattcacatgtgataaaccaaatgtcacaattactttaatagtttatggtgttttccaaca------------agaaaacaat 7156422  T
Q  506 aataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||| |||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||    
T  7156423 aataaattcactaaaacatctaaagttttggaatatagttgattgtctaaaacatcaaaagaaaagaaatggagggagtat 7156503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 129; E-Value: 3e-66
Query Start/End: Original strand, 410 - 578
Target Start/End: Complemental strand, 5004057 - 5003889
Alignment:
Q  410 ttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataata 509  Q
    ||||||| |||||||||||| | | ||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5004057 ttatttaacattaaattcacctgtgataaatcaaatgtcaaaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataata 5003958  T
Q  510 aattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 578  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  5003957 aattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaaaaaaatgaatgga 5003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 118; E-Value: 9e-60
Query Start/End: Original strand, 308 - 585
Target Start/End: Complemental strand, 18742223 - 18741947
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||| ||||||| ||||| ||| |||||||||||||  ||| |||| |    
T  18742223 tactccctccatttcttttcttttgatgttttacctcttggcacaagtcttaaggaataattaatgtataaaaatatttgtgtgttttg-actaaaatat 18742125  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
    |||||| ||||| ||||||| ||| | |||| ||||| |||||||||  |||   |||    |||||||| ||||||||||||| ||||||| ||||||     
T  18742124 ccttatatatcaataaattctcatgtcataagccaaaagtcataactctttttgcagtacggtgtgtttttcaacaagggtaaatttgagaatacaatat 18742025  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||  |||||||||||||| |||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  18742024 taaatatactaaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggagggagta 18741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 483 - 587
Target Start/End: Complemental strand, 12174802 - 12174698
Alignment:
Q  483 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  12174802 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatatttaaagttctaaaacattaaaagaaaaggaatggaggga 12174703  T
Q  583 gtata 587  Q
    |||||    
T  12174702 gtata 12174698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 306 - 408
Target Start/End: Complemental strand, 5008410 - 5008308
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5008410 aatactcctttcattccttttcttttgatgttttagctcttaacacaagttttaaggagtaattaaagtatataaatatttgtgtgttttttacttaaat 5008311  T
Q  406 gtc 408  Q
    |||    
T  5008310 gtc 5008308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 308 - 372
Target Start/End: Original strand, 8504733 - 8504797
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaa 372  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8504733 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaa 8504797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 537 - 585
Target Start/End: Original strand, 29302500 - 29302548
Alignment:
Q  537 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29302500 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 306 - 341
Target Start/End: Complemental strand, 27312395 - 27312360
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||||    
T  27312395 aatactccctccattccttttcttttgatgttttag 27312360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 552 - 586
Target Start/End: Complemental strand, 27312147 - 27312113
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||    
T  27312147 ctaaaacatcaaaagaaaaggaatggagggagtat 27312113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 32274433 - 32274467
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  32274433 atactccctccattccttttcttttgatgttttag 32274467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 552 - 585
Target Start/End: Complemental strand, 8504766 - 8504733
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||||||||||||||||||    
T  8504766 ctaaaacatcaaaagaaaaggaatggagggagta 8504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 29302548 - 29302515
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  29302548 tactccctccattccttttcttttgatgttttag 29302515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 586
Target Start/End: Original strand, 2543325 - 2543359
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||| |||||||||||||||    
T  2543325 ctaaaacatcaaaagaaaacgaatggagggagtat 2543359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 7156503 - 7156469
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||| ||||||||||||||||||||    
T  7156503 atactccctccatttcttttcttttgatgttttag 7156469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 12174699 - 12174733
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||| |||||||||    
T  12174699 atactccctccattccttttcttttaatgttttag 12174733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 308 - 341
Target Start/End: Original strand, 18741947 - 18741980
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||| ||||||||||||||||||||    
T  18741947 tactccctccatttcttttcttttgatgttttag 18741980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 32274678 - 32274711
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||| ||||||||||||||    
T  32274678 ctaaaacatcaaaagaaaatgaatggagggagta 32274711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 238; Significance: 1e-131; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 311 - 588
Target Start/End: Original strand, 8955779 - 8956056
Alignment:
Q  311 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtcct 410  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8955779 tccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtattttttacttaaatgtcct 8955878  T
Q  411 tatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataa 510  Q
    ||||||||||||||||||||| | ||||||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||    
T  8955879 tatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttattgtgttttccaataagggtaaacttgataaaacaataacaa 8955978  T
Q  511 attcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8955979 attcactaaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaaaaaaaggaatggagggagtatat 8956056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 308 - 589
Target Start/End: Complemental strand, 45591019 - 45590738
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45591019 tactccctccattcattttcttttgatgttttagctcttgacataagttgtaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 45590920  T
Q  408 ccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataa 507  Q
     |||||||||||||||||||| || | ||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  45590919 tcttatttatcattaaattcatatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaaaggtaaacttgataaaacaataa 45590820  T
Q  508 taaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtatatg 589  Q
    | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45590819 tgaattcactaaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggagtatatg 45590738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 325 - 586
Target Start/End: Original strand, 33288421 - 33288683
Alignment:
Q  325 ttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgtttt-ttacttaaatgtccttatttatcattaa 423  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  33288421 ttcttttgatgttttagctattgacacaagttttaaggagtaattaaagtatataaacatttgtgtatttttttacttaaatgtccttatttatcattaa 33288520  T
Q  424 attcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaaca 523  Q
    |||||||| | |||||||||| |||| ||||||||||  ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  33288521 attcacatgtgataaaccaaatgtcacaactactttatcagtatattgtgttttccaacatgggtaaacttgagaaaacaataataaattcactaaaaca 33288620  T
Q  524 tcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  33288621 tcaaaagttttggaatataattgaagttctaaaatatcaaaagaaaagaaatggagggagtat 33288683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 308 - 575
Target Start/End: Complemental strand, 34334613 - 34334342
Alignment:
Q  308 tactccctccattcctttt-cttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataa---acatttgtgtgttttttacttaa 403  Q
    ||||||||||||||||||| ||||||||| || | ||||| |||||||| ||||||||||||||||||||||||   |||||||| ||||||||||||||    
T  34334613 tactccctccattcctttttcttttgatgattaaactcttaacacaagtcttaaggagtaattaaagtatataataaacatttgtatgttttttacttaa 34334514  T
Q  404 atgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaaca 503  Q
    ||||| |||||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||    
T  34334513 atgtctttatttatcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaagaca 34334414  T
Q  504 ataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 575  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34334413 ataataaattcactaaagcatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 34334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 165; E-Value: 9e-88
Query Start/End: Original strand, 307 - 579
Target Start/End: Complemental strand, 49162366 - 49162108
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    |||||||||||||||| |||||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| ||||||||| |||||||| |||||    
T  49162366 atactccctccattccctttcttttgatgttttagctattggcacaagttttaaagagtaattaaagtatataaatatttgtgtgatttttactaaaatg 49162267  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||||||||||             |||||||||| | ||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||    
T  49162266 tccttatttatcattaaa-------------aaccaaaggttacaactactttaatagtttatggtgttttccaacaagg-taaaattgagaaaacaata 49162181  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggag 579  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  49162180 ataaattcactaaaacatcaaaaattttggaatatagttgaagttctgaaacatcaaaagaaaatgaatggag 49162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 162; E-Value: 5e-86
Query Start/End: Original strand, 314 - 519
Target Start/End: Complemental strand, 36971319 - 36971115
Alignment:
Q  314 ctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttat 413  Q
    |||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  36971319 ctccattcattttcttttgatgttttagcttttgacacaagttttaagaagtaattaaagtatataaacatttgtgtgttttttacttaaatatccttat 36971220  T
Q  414 ttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaatt 513  Q
    |||||||||||||||||| | ||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  36971219 ttatcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaa-ggtaaacttcagaaaacaataataaatt 36971121  T
Q  514 cactaa 519  Q
    ||||||    
T  36971120 cactaa 36971115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 323 - 570
Target Start/End: Original strand, 50774073 - 50774325
Alignment:
Q  323 ttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcatta 422  Q
    |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||   ||||||||||||||    
T  50774073 ttttttttttatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtgttttttacttaaataatcttatttatcatta 50774172  T
Q  423 aattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaa- 521  Q
    |||| |||| | |||||||||| ||||  |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||     
T  50774173 aatttacatgtgataaaccaaaagtcacgactaatttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaat 50774272  T
Q  522 ----catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
         ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  50774273 actgtatcaaaagttttgaaatatagttaaagttctaaaacatcaaaaaaaaa 50774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 306 - 585
Target Start/End: Complemental strand, 18835986 - 18835705
Alignment:
Q  306 aatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaat 405  Q
    |||||||| ||||||  |||| ||||||||||||| || ||  ||||| |||||||||||||||||| |||||||| |||||||||||||| ||| ||||    
T  18835986 aatactccttccatttattttattttgatgttttatcttttcgcacaaattttaaggagtaattaaaatatataaatatttgtgtgtttttaactaaaat 18835887  T
Q  406 gtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaat 505  Q
    |||||||||||||||||||||||||| | ||||| |||| |||| |||||||||||||||||||  ||||||| ||||||| |||| |||||||||||||    
T  18835886 gtccttatttatcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttatgatgttttctaacaaggataaatttgagaaaacaat 18835787  T
Q  506 a--ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |  ||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  18835786 aatatatattcactaaaacatcgaaagttttggaatatagttgaagttctaaaacatcaaaagaaaataaatgaagggagta 18835705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 115; E-Value: 6e-58
Query Start/End: Original strand, 307 - 588
Target Start/End: Original strand, 26025527 - 26025803
Alignment:
Q  307 atactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatg 406  Q
    ||||||||||| ||  || |||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||| |||||| ||||||  ||| |||||    
T  26025527 atactccctccgttttttatcttttgatgttttagctcttggcacaagtcttagggagtaattaaagtatagaaatatttgtatgttttggactaaaatg 26025626  T
Q  407 tccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaata 506  Q
    ||||||||||| ||||||||||||| | |||| |||||||||| ||||| ||| || |     |||||||| ||||||||||||||||| ||||| ||||    
T  26025627 tccttatttatgattaaattcacatgtgataagccaaaggtcacaactagttttatgg-----tgtgtttttcaacaagggtaaacttgggaaaa-aata 26025720  T
Q  507 ataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaag-aaaaggaatggagggagtatat 588  Q
     |||||  |||||||  |||||  |||||||||||||||||||| ||||||||||||||| ||||  ||||||||||||||||    
T  26025721 ttaaatatactaaaatgtcaaatattttggaatatagttgaagtcctaaaacatcaaaagaaaaaaaaatggagggagtatat 26025803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 309 - 447
Target Start/End: Complemental strand, 39482138 - 39482000
Alignment:
Q  309 actccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtc 408  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||||||    
T  39482138 actccctccatttcttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgtatttttgactaaaatgtc 39482039  T
Q  409 cttatttatcattaaattcacatctaataaaccaaaggt 447  Q
    ||||||||  ||||||||||||| | |||||||||||||    
T  39482038 cttatttagtattaaattcacatgtgataaaccaaaggt 39482000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 308 - 431
Target Start/End: Original strand, 30469213 - 30469336
Alignment:
Q  308 tactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgt 407  Q
    |||||||| |||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||||||||    
T  30469213 tactcccttcatttcttttcttttgatgttttaactcttgacacaagttttaagaagtaattaaagtatataaatatttgtgtattttttacttaaatgt 30469312  T
Q  408 ccttatttatcattaaattcacat 431  Q
    | || |||||||||||||||||||    
T  30469313 cattgtttatcattaaattcacat 30469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 493 - 586
Target Start/End: Original strand, 30469353 - 30469446
Alignment:
Q  493 ttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  30469353 ttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagtat 30469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 486 - 582
Target Start/End: Complemental strand, 39482002 - 39481906
Alignment:
Q  486 ggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 582  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  39482002 ggtaaacctgagaaaacaataataaatttactaaaacatcaaaagttttggaaaatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 39481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 334 - 570
Target Start/End: Original strand, 33108924 - 33109163
Alignment:
Q  334 tgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaatgtccttatttatcattaaattcacatct 433  Q
    ||||||| |||||||||||||| ||||| | |||||||| |||||||| |||| | ||||||   || |||  | ||||||||| |||||||| |||| |    
T  33108924 tgttttaactcttgacacaagtcttaagaaataattaaattatataaatatttctatgttttgagctaaaaaattcttatttataattaaatttacatgt 33109023  T
Q  434 aataaaccaaaggtcataactactttaatagttt-at--tgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaaaacatcaaaag 530  Q
    |||||  ||||||||| ||||  ||||||||||| ||  ||||||||  ||||||| ||||||| |||||| |||| |||||  |||||||||||||       
T  33109024 aataagacaaaggtcacaactcatttaatagttttatggtgtgttttttaacaaggataaacttaagaaaaaaatattaaatatactaaaacatcaatta 33109123  T
Q  531 ttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    ||||  |||||||||||||| ||||||||| |||||||||    
T  33109124 ttttaaaatatagttgaagtcctaaaacattaaaagaaaa 33109163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 516 - 586
Target Start/End: Complemental strand, 19256255 - 19256185
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||    
T  19256255 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagtat 19256185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 535 - 586
Target Start/End: Complemental strand, 36016329 - 36016278
Alignment:
Q  535 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 586  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016329 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtat 36016278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 516 - 570
Target Start/End: Complemental strand, 36968407 - 36968353
Alignment:
Q  516 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 570  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36968407 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaaaaaaa 36968353  T

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Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 305 - 341
Target Start/End: Original strand, 19256183 - 19256219
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||||    
T  19256183 taatactccctccattccttttcttttgatgttttag 19256219  T

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Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 551 - 585
Target Start/End: Original strand, 19257103 - 19257137
Alignment:
Q  551 tctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    |||||||||||||||||||||||||||||||||||    
T  19257103 tctaaaacatcaaaagaaaaggaatggagggagta 19257137  T

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Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 36016278 - 36016312
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||||||||||||||||||    
T  36016278 atactccctccattccttttcttttgatgttttag 36016312  T

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Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 308 - 341
Target Start/End: Complemental strand, 19257137 - 19257104
Alignment:
Q  308 tactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||||||||||||||||||||||    
T  19257137 tactccctccattccttttcttttgatgttttag 19257104  T

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Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 305 - 341
Target Start/End: Complemental strand, 30469448 - 30469412
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||| |||||||||||||||||||||||||    
T  30469448 taatactcccttcattccttttcttttgatgttttag 30469412  T

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Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 552 - 588
Target Start/End: Original strand, 49162332 - 49162368
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49162332 ctaaaacatcaaaagaaagggaatggagggagtatat 49162368  T

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Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 552 - 582
Target Start/End: Complemental strand, 8955809 - 8955779
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggaggga 582  Q
    |||||||||||||||||||||||||||||||    
T  8955809 ctaaaacatcaaaagaaaaggaatggaggga 8955779  T

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Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Complemental strand, 8956054 - 8956020
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    |||||||||||||||||||| ||||||||||||||    
T  8956054 atactccctccattcctttttttttgatgttttag 8956020  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 307 - 341
Target Start/End: Original strand, 45590741 - 45590775
Alignment:
Q  307 atactccctccattccttttcttttgatgttttag 341  Q
    ||||||||||||||| |||||||||||||||||||    
T  45590741 atactccctccattcattttcttttgatgttttag 45590775  T

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Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 304 - 341
Target Start/End: Original strand, 39481899 - 39481936
Alignment:
Q  304 gtaatactccctccattccttttcttttgatgttttag 341  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  39481899 gtaatattccctccatttcttttcttttgatgttttag 39481936  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 552 - 585
Target Start/End: Original strand, 45590986 - 45591019
Alignment:
Q  552 ctaaaacatcaaaagaaaaggaatggagggagta 585  Q
    ||||||||||||||||||| ||||||||||||||    
T  45590986 ctaaaacatcaaaagaaaatgaatggagggagta 45591019  T

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Target: scaffold0103 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 305 - 588
Target Start/End: Complemental strand, 44898 - 44616
Alignment:
Q  305 taatactccctccattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaacatttgtgtgttttttacttaaa 404  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||    
T  44898 taatactctctacattccttttcttttgatgttttagctcttgacacaagttttaaggagtaattaaagtatataaatatttgtgt--tttttacttaaa 44801  T
Q  405 tgtccttatttatcattaaattcacatctaataaaccaaaggtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaa 504  Q
    ||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44800 tgtccttatttatcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaa 44701  T
Q  505 taataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca-aaagaaaaggaatggagggagtatat 588  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||    
T  44700 taataaattcactaaaacctcaaaagttttggaatatagttgaagttctcaaacatcagaaagaaaaggaatgaagggagtatat 44616  T

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