View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4857_low_1 (Length: 1016)
Name: NF4857_low_1
Description: NF4857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4857_low_1 |
 | |
|
| [»] scaffold0428 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 826; Significance: 0; HSPs: 21)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 826; E-Value: 0
Query Start/End: Original strand, 1 - 866
Target Start/End: Complemental strand, 33390054 - 33389189
Alignment:
| Q |
1 |
atatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaact |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
33390054 |
atatagattatgtgatggtcctttggatgcacaaaagcaaattctatttcaaactctcgacataaaacaccatcaaatatgcaatcgttacattgcaact |
33389955 |
T |
|
| Q |
101 |
gatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
33389954 |
gatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaatcggaaaaaatagctgtgcatcgtgagt |
33389855 |
T |
|
| Q |
201 |
ggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcg |
300 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389854 |
ggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcg |
33389755 |
T |
|
| Q |
301 |
gaccgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgct |
400 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389754 |
gaccgattctcacaagttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgct |
33389655 |
T |
|
| Q |
401 |
aacggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaa |
500 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
33389654 |
aatggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattggctagattgagagaaaggccag |
33389555 |
T |
|
| Q |
501 |
ataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatc |
600 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389554 |
ataacgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatc |
33389455 |
T |
|
| Q |
601 |
agagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgat |
700 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389454 |
agagaaatatgtaaaaaacgttctaaatcattgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgat |
33389355 |
T |
|
| Q |
701 |
tcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccc |
800 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389354 |
tcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccc |
33389255 |
T |
|
| Q |
801 |
aaaaacaactctacaatgttacgatggagaaaatggtaaaattaccatttagaaataaagaaacat |
866 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389254 |
aaaaacaactctacaatgttacgatggagaaaatggtaaaattaccatttagaaataaagaaacat |
33389189 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 463; E-Value: 0
Query Start/End: Original strand, 2 - 865
Target Start/End: Complemental strand, 33411934 - 33411073
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
|||||||||| ||||||||| | |||||||||| ||||| ||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
33411934 |
tatagattatatgatggtcccctcgatgcacaaaggcaaatcctacttcaaactgtcggcatagaacaccatcaaatatgcaatcgttacagtgcaactg |
33411835 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
||||||||||||||||| || ||| ||||||| |||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| || |
|
|
| T |
33411834 |
atttgatacgacgtaggttacgtcatgaaaaggcccttctgatttttgataatgtggatcaagttgaacaattggaaaaaatagctgtgcatcgtgaatg |
33411735 |
T |
|
| Q |
202 |
gttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgg |
301 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||| | |
|
|
| T |
33411734 |
gttaggtgcgggtagtagaatcgttatcatttctagagatgagcatatattgaaagagtacggagtggatgtagtttacaaagttccacttatgaatagt |
33411635 |
T |
|
| Q |
302 |
accgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgcta |
401 |
Q |
| |
|
|| |||||| || | |||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||| |||||||| |
|
|
| T |
33411634 |
acagattcttacgagttattttgtcgaaaagctttcaaagttgagaaaattattatgagtgattatcaaaatttggcaaatgagatactagattatgcta |
33411535 |
T |
|
| Q |
402 |
acggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaa |
501 |
Q |
| |
|
| ||||| |||||||||||||||||||||||||||||||||||||||| || |||| | |||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
33411534 |
aaggtctaccactagcaattaaagtattgggctcatttttgtttggtcatagtgtggctgaatggaagagtgcattggctagattgagagaaagtccgca |
33411435 |
T |
|
| Q |
502 |
taatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaac-cgcgaatc |
600 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||| || || | | |||||||||||||||||||||||||||||||||||||||| | | | |
|
|
| T |
33411434 |
taatgatgtcatggatgtgctgcacttaagttttgatgggttagatgaaaaggaaaaagaaatatttcttgatattgcttgttttttcaactctcagccc |
33411335 |
T |
|
| Q |
601 |
agagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgat |
700 |
Q |
| |
|
||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||| |
|
|
| T |
33411334 |
cgagaaatatgttaaaaacgttctaaattgttgtggatttcatgctgatattggattaggagttctcattgataaatcacttataagcattga---ggat |
33411238 |
T |
|
| Q |
701 |
tcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccc |
800 |
Q |
| |
|
|| ||| ||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
33411237 |
gcaaatattaaaatgcattctttgttggaagagctaggcagaaaaattgtgcaagaaaattcaagcaaagagcaaagaaagtggagcaggatctggtcca |
33411138 |
T |
|
| Q |
801 |
aaaaacaactctacaatgttacgatggagaaaatggtaaaattaccatttagaaataaagaaaca |
865 |
Q |
| |
|
|||||||||||||||| |||| ||||||||| |||||||| | || ||||||||| || ||||| |
|
|
| T |
33411137 |
aaaaacaactctacaacgttatgatggagaatatggtaaagtaactgtttagaaattaaaaaaca |
33411073 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 427; E-Value: 0
Query Start/End: Original strand, 2 - 866
Target Start/End: Original strand, 31560908 - 31561769
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
||||||| | |||||||||| | ||||||||||| ||||| ||| |||||||| ||| |||||||||| ||||||||||||||| ||||| |||||| |
|
|
| T |
31560908 |
tatagatcaggtgatggtcccctcgatgcacaaaagcaaatcctacttcaaactgtcggcatagaacacaatcaaatatgcaatcattacagcgcaacta |
31561007 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
||||||| ||| | ||| ||| ||||| | |||| |||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||| || |
|
|
| T |
31561008 |
atttgatgcgaataaatctatgtcatgaaagggcccttctgattcttgataatgtagatcaagttggacaattggaaaaaatagctgtgcgtcgtgaatg |
31561107 |
T |
|
| Q |
202 |
gttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgg |
301 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
31561108 |
gttaggtgcagggagtagaattattatcatttctagagatgagcatatattgaaagagtatggagtggatgtagtttacaaagttccacttttgaatcag |
31561207 |
T |
|
| Q |
302 |
accgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgcta |
401 |
Q |
| |
|
|||| ||||||| |||||||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| |||||||| |
|
|
| T |
31561208 |
gccgagtctcacatgttattttgtcgaaaagctttcaaagttgagaaaattattatgagtgattatcaaaatttggcagatgagatactgaattatgcta |
31561307 |
T |
|
| Q |
402 |
acggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaa |
501 |
Q |
| |
|
| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||| | |
|
|
| T |
31561308 |
aaggtctaccgctagcaattacagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattgtccagattgagagaaagtccaga |
31561407 |
T |
|
| Q |
502 |
taatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatca |
601 |
Q |
| |
|
|||| |||||||||||||||| ||| ||||||||||||||||||||| || |||||||||||| |||||| |||||||||||||||||||| |
|
|
| T |
31561408 |
taataatgtcatggatgtgctgcagataagttttgatggtctaaatcttacggaaaaagaaatgtttcttcatattgcttgttttttcaactttctgcac |
31561507 |
T |
|
| Q |
602 |
gagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgatt |
701 |
Q |
| |
|
|||||| || |||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| |
|
|
| T |
31561508 |
gagaaaagagttaaaaacattctaaatagttgtggatttcatgctgatattggattaagagttctccttgataaatcacttataagcattgata---att |
31561604 |
T |
|
| Q |
702 |
cagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccca |
801 |
Q |
| |
|
|| | ||| ||||||||| ||| |||| || ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31561605 |
caataattaaaatgcattatttgttggaagaactaggcagaaaaattgtgcaagaaagttcaagcaaagagcaaagaaagtggagcaggttgtggtccca |
31561704 |
T |
|
| Q |
802 |
aaaacaactctacaatgttacgatggagaaaatggtaaaattaccatttagaaataaagaaacat |
866 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||| || | ||||||| |||| |||||| |
|
|
| T |
31561705 |
tgaacaaatctacaatgttatgatggagaaaatggtaaagtttctgtttagaattaaaaaaacat |
31561769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 426; E-Value: 0
Query Start/End: Original strand, 13 - 840
Target Start/End: Complemental strand, 33273762 - 33272938
Alignment:
| Q |
13 |
tgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacga |
112 |
Q |
| |
|
||||||||| | ||||||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||| ||||| | |||| ||||||||||| |
|
|
| T |
33273762 |
tgatggtcccctcgatgcacaaaagcaaatcctacttcaaactctcggcatagaacaccatcaaatatgcaatcattacagcgtaactaatttgatacga |
33273663 |
T |
|
| Q |
113 |
cgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcag |
212 |
Q |
| |
|
|||||||| ||||||||| | ||| |||||||||||||||||||||||| || ||| ||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
33273662 |
agtaggctatgtcgtgaaagggtccttctgattcttgataatgtggatcaagttgcacagttggaaaaaataggtgtgcatcgtgaatggttaggtgcag |
33273563 |
T |
|
| Q |
213 |
gtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctca |
312 |
Q |
| |
|
|||||||||| || |||||||||||||||||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||| |||| |||||||| |
|
|
| T |
33273562 |
gtagtagaattataatcatttctagagatgagcatatattgaaatactatggagtggatgcagtttacaaagttccacttttgaattggacagattctca |
33273463 |
T |
|
| Q |
313 |
caatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttcca |
412 |
Q |
| |
|
||| |||||||||||||||||||||||| ||||||| |||||||||||| ||| |||| || | | |||||| || ||||||||| ||||| ||| |
|
|
| T |
33273462 |
caagttattttgtcaaaaagctttcaaatttgagaaagttattatgagtaattatgaaaacttagcgtatgagattctagattatgctaatggtctacca |
33273363 |
T |
|
| Q |
413 |
ctagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtca |
512 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
33273362 |
ctagcaattatagtattgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgccctggctagattgagagaaagtccaaataatgatatca |
33273263 |
T |
|
| Q |
513 |
tggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatcagagaaatatgt |
612 |
Q |
| |
|
|||||||||| || |||||||||||||| ||| | |||| |||||||||||||||||| |||||||||||||||||| | | || || ||||||| |
|
|
| T |
33273262 |
tggatgtgctgcaattaagttttgatgggctagagcatactgaaaaagaaatatttcttcatattgcttgttttttcagctacagttcgaaggaatatgt |
33273163 |
T |
|
| Q |
613 |
aaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattcagtgattgaa |
712 |
Q |
| |
|
|||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||| ||||||||||||||||||| | | |||| ||| ||| | |
|
|
| T |
33273162 |
taaaaacattctaaattgttgtggttttcatgctgacattggattaagtgttctcaatgataaatcacttataagcct---tggtgagtcaacaattata |
33273066 |
T |
|
| Q |
713 |
atgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactct |
812 |
Q |
| |
|
||||||||||| |||| ||||| |||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
33273065 |
atgcattctttgttggaagagctgggcagaaaaattgtgcaagaaaattcaagcaaagagcgaagaaagtggagcagggtgtggtccgaaaaacaactca |
33272966 |
T |
|
| Q |
813 |
acaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
33272965 |
acaatgttacgatggagaaaatggtaaa |
33272938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 2 - 839
Target Start/End: Complemental strand, 33402595 - 33401761
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
|||||||||| |||||| || | ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
33402595 |
tatagattatatgatggcccaattgatgcacaaaagcaaatcctacatcaaactctcggcatagaacaccatcaaatatgcaatcgttacagtgcaattg |
33402496 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
||||||||| |||||||||| ||||||||||| | || ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||| || |
|
|
| T |
33402495 |
atttgatacaacgtaggctacgtcgtgaaaaggctcttctgatttttgataatgtggatcaagttgaacaattggaaaaaataggtgtgcatcgtgaatg |
33402396 |
T |
|
| Q |
202 |
gttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgg |
301 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||||||| || |
|
|
| T |
33402395 |
tttaggtgcgggtagtagaattattatcatttctagagatgaacatatattgaaagagtatgaagtggacgtagtttacaaagttcaacttttgaattgg |
33402296 |
T |
|
| Q |
302 |
accgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgcta |
401 |
Q |
| |
|
||||| ||||| || |||||||||| ||||||||||||| |||||||||||||||||||| ||| |||||||||| | ||||| ||| |||||||| |
|
|
| T |
33402295 |
accgaatctcataagttattttgtcgaaaagctttcaaagctgagaaaattattatgagtaattatcaaaatttggcaaataagatattgaattatgcta |
33402196 |
T |
|
| Q |
402 |
acggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaa |
501 |
Q |
| |
|
||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
33402195 |
gtggtctaccacttgcaattaaagtattgggctcatttttgttcggtcgtaatgtgactgaatggaagagtgcattggctaaattgagagaaagtccaaa |
33402096 |
T |
|
| Q |
502 |
taatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccg-cgaatc |
600 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||||||| || | | | ||||||| ||||||||||||||||||||||| ||||||| | | | |
|
|
| T |
33402095 |
taaagatgtcatggatgtgctgcaattaagttttgatgggttagagaagacggaaaaacaaatatttcttgatattgcttgtcttttcaattgtctggac |
33401996 |
T |
|
| Q |
601 |
agagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgat |
700 |
Q |
| |
|
| | ||||||| |||||| |||||||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| || | |
|
|
| T |
33401995 |
a-tggaatatgttaaaaacattctaaattgttgtggatttaatgctgatattggaataagagttctcattgataaatcacttataagcattaatggtca- |
33401898 |
T |
|
| Q |
701 |
tcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccc |
800 |
Q |
| |
|
| ||||||||||||||||| ||| |||||||||||||||||||||| | ||| |||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
33401897 |
--aaatattgaaatgcattctttgttgaaagagctaggcagaaaaattgtgcaaaaaacttcaagcaaagagccaagaaaatggagcaggttgtggtctg |
33401800 |
T |
|
| Q |
801 |
aaaaacaactctacaatgttacgatggagaaaatggtaa |
839 |
Q |
| |
|
||||||||||||| |||||| ||||||||| ||||||| |
|
|
| T |
33401799 |
caaaacaactctacgatgttaagatggagaatatggtaa |
33401761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 27 - 840
Target Start/End: Complemental strand, 33306442 - 33305632
Alignment:
| Q |
27 |
atgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtcg |
126 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| | |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
33306442 |
atgcacaaaagcaaatcctatttcaaactctaggcatagaacaccatctaataagcaatcgttacaacgcaactgatttgatacgacgtaggctacgtcg |
33306343 |
T |
|
| Q |
127 |
tgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataatt |
226 |
Q |
| |
|
||||||| ||| |||||||||||||||| || ||| |||||||||||||||||| || |||||||| || ||||||||||||||||||||||| || |
|
|
| T |
33306342 |
tgaaaaggtccttctgattcttgataatgtcaatgaagttgaacaattggaaaaaattgcagtgcatcgcgaatggttaggtgcaggtagtagaatcgtt |
33306243 |
T |
|
| Q |
227 |
atcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgtc |
326 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| ||| |||||||||||||||| |||||| | |||| |||||||| |||||||||| |
|
|
| T |
33306242 |
gtcatttctagagatgagcatatattgaaggagtatggagtggatgtattttacaaagttccactcttgaatatggccgaatctcacaagttattttgtc |
33306143 |
T |
|
| Q |
327 |
aaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagt |
426 |
Q |
| |
|
|||||||||||||| |||||| ||||| || ||| ||| |||||||||| ||||||| ||||||||||||| ||||| || |||||||||| | | |
|
|
| T |
33306142 |
gaaaagctttcaaacttgagaacattatattgggtaattatcaaaatttggcagatgagatattgagttatgctaatggtctacccctagcaattacaat |
33306043 |
T |
|
| Q |
427 |
attgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacag |
526 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| || |
|
|
| T |
33306042 |
attgggctcatttttgtttggtcgtaatgtgactgaatggaagagtgcattggctagattgagagaaagtccaaataaagatgtcatgaatgtgctgcat |
33305943 |
T |
|
| Q |
527 |
ttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaac-cgcgaatcagagaaatatgtaaaaaacgttcta |
625 |
Q |
| |
|
|||||||||||||| ||| | | | |||| |||||||||||||||||||||||||||| |||||| | | || | || | || |||||| ||||| |
|
|
| T |
33305942 |
ttaagttttgatgggctagaggagacggaacaagaaatatttcttgatattgcttgtttcttcaactcttggccca-tggaagaggttaaaaacattcta |
33305844 |
T |
|
| Q |
626 |
aatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattcagtgattgaaatgcattctttat |
725 |
Q |
| |
|
||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || ||| | ||||| |||||||| |||||||| | |
|
|
| T |
33305843 |
aattgttgtggattccatgctgatattggattaagagttctcaatgataaatcacttataaacactaa---ttattcacatattgaaatacattctttgt |
33305747 |
T |
|
| Q |
726 |
tggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgat |
825 |
Q |
| |
|
||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||| | | |
|
|
| T |
33305746 |
tggaagagctaggcagaaaaattgtgcaagaaaattcaagcaaagagcaaagaaagtggagcagggtctggtccaaaaagcaactctacaatgttatggt |
33305647 |
T |
|
| Q |
826 |
ggagaaaatggtaaa |
840 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
33305646 |
ggagaatatggtaaa |
33305632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 397; E-Value: 0
Query Start/End: Original strand, 2 - 840
Target Start/End: Original strand, 33642701 - 33643539
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
||||||||| ||||||||| | || |||||||| ||||| |||||||||||||| | |||||||||||||||||||||||||||| |||| ||||||| |
|
|
| T |
33642701 |
tatagattacatgatggtccactcgaagcacaaaagcaaatcctatttcaaactcttggcatagaacaccatcaaatatgcaatcgtaacatggcaactg |
33642800 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
|||||||||||||||||||| ||||||| ||| |||| |||||||||||||||| ||||||| ||||||||| |||||||||| ||||| |||||| || |
|
|
| T |
33642801 |
atttgatacgacgtaggctacgtcgtgagaaggcccttctgattcttgataatgttgatcaagttgaacaatttgaaaaaataggtgtgcgtcgtgaatg |
33642900 |
T |
|
| Q |
202 |
gttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgg |
301 |
Q |
| |
|
||||||||||||||||| | | |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| | |
|
|
| T |
33642901 |
gttaggtgcaggtagtatagttattatcatttctagagatgagcatatattgaaagtgtatggagtggatgtagtttacaaagttccacttttgaatcag |
33643000 |
T |
|
| Q |
302 |
accgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgcta |
401 |
Q |
| |
|
|| || ||| ||| || ||||||| |||||||||||||| |||||||| ||||||||||| ||| | ||| |||| | ||| |||| ||||||||| |
|
|
| T |
33643001 |
acagaatcttgcaagttgttttgtcgaaaagctttcaaacttgagaaaactattatgagtaattatcgaaagttggcatctgatgtactacgttatgcta |
33643100 |
T |
|
| Q |
402 |
acggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaa |
501 |
Q |
| |
|
| ||||| ||||||||||||| | ||||| ||||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| ||||| | |
|
|
| T |
33643101 |
atggtctaccactagcaattacaatattgagctcatttttgtttggtcgtaatgtaactgaatggaatggtgcattggctagattgagagaaggtccaga |
33643200 |
T |
|
| Q |
502 |
taatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatca |
601 |
Q |
| |
|
||||||||| ||||||||||| ||||| ||||||| ||||| | | |||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
33643201 |
taatgatgttatggatgtgctgagtttaagctttgatgtgctaaaggagagtgaaaaagaaatatttcttgatattgcttgttttttcaa-cggttatca |
33643299 |
T |
|
| Q |
602 |
-gagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcatt-aatagtga |
699 |
Q |
| |
|
|||||||||| |||||| || ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || | | |
|
|
| T |
33643300 |
cgagaaatatgctaaaaacattttaaattgttgtggatttcatgctgatattgggttaagagttctcattgataaatcacttataagcattgattattca |
33643399 |
T |
|
| Q |
700 |
ttcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcc |
799 |
Q |
| |
|
| || |||||||||||||||| | || | |||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
33643400 |
atgag-gattgaaatgcattctctgttagaagagctaggaaaaaaaattgtgcaagaaaattcaagcaaagagcaaagaaagtggagcaggctgtggtcc |
33643498 |
T |
|
| Q |
800 |
caaaaacaactctacaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
|||||||| ||||||||||| ||||||||| |||||||| |
|
|
| T |
33643499 |
aaaaaacaaatctacaatgttgtgatggagaatatggtaaa |
33643539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 385; E-Value: 0
Query Start/End: Original strand, 26 - 840
Target Start/End: Complemental strand, 33059520 - 33058709
Alignment:
| Q |
26 |
gatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtc |
125 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||| ||||||| |||||||| | | | |||| ||| |
|
|
| T |
33059520 |
gatgtacaaaaacaaatcctatttcaaactctcggcatagaacaccaacaaatatgcaatcgttaccatgcaactactttgatacaaaggaagctatgtc |
33059421 |
T |
|
| Q |
126 |
gtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataat |
225 |
Q |
| |
|
||||| ||||| ||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||| || |
|
|
| T |
33059420 |
atgaaagaacccttatgattcttgataatgtggaccaagttgaacaattggagaaaatagcggtgcatcgtgaatggttaggtccaggtagtagaattat |
33059321 |
T |
|
| Q |
226 |
tatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgt |
325 |
Q |
| |
|
|||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||| |||| ||| || ||| || |||||| ||||||||| |
|
|
| T |
33059320 |
tatcatttctagagatgagcatgtattgaaagcgtatggagtggatgtagtttacaaagtttcactattggattggaatgaagctcacatgttattttgt |
33059221 |
T |
|
| Q |
326 |
caaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaag |
425 |
Q |
| |
|
| ||||||||||||| ||||||||||||||||||||| ||| |||||||||| | ||||||| ||||||||| ||||| |||||||||||||||| |
|
|
| T |
33059220 |
cgaaaagctttcaaagatgagaaaattattatgagtaattatcaaaatttggtagatcagatactacattatgctaaaggtctaccactagcaattaaag |
33059121 |
T |
|
| Q |
426 |
tattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctaca |
525 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||| ||| ||||||||||||||||| || |
|
|
| T |
33059120 |
tattgggctcgtttttgtttggtcgtaatgtgactgaatggaagagtgcattgactagattgagacaaagtccagttaaagatgtcatggatgtgctgca |
33059021 |
T |
|
| Q |
526 |
gttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatcagagaaatatgtaaaaaacgttcta |
625 |
Q |
| |
|
|||||||||||||| || ||| | | ||||||||| ||||||||| |||||||||||||||||||| ||| || ||| || |||| |||||| ||||| |
|
|
| T |
33059020 |
attaagttttgatgggctcaatgaaacggaaaaagacatatttcttcatattgcttgttttttcaacaacgattcggaggaagatgttaaaaacattcta |
33058921 |
T |
|
| Q |
626 |
aatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattcagtgattgaaatgcattctttat |
725 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| ||||| | ||| | ||||||||||| | |
|
|
| T |
33058920 |
aactgttgtggatttcatgctgatattggattaagagttctcattgataaatcacttgtaagcat---tagttattcaattattaacatgcattctttgt |
33058824 |
T |
|
| Q |
726 |
tggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgat |
825 |
Q |
| |
|
||| |||||||||||||||||||||| | | | |||||||||||| | |||||| ||||||||| |||||||| | ||||||||||| |||||| | | |
|
|
| T |
33058823 |
tggaagagctaggcagaaaaattgtgcaaaatagttcaagcaaagaaccaagaaaatggagcaggttgtggtccacagaacaactctacgatgttatgtt |
33058724 |
T |
|
| Q |
826 |
ggagaaaatggtaaa |
840 |
Q |
| |
|
|||||| |||||||| |
|
|
| T |
33058723 |
ggagaatatggtaaa |
33058709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 383; E-Value: 0
Query Start/End: Original strand, 4 - 840
Target Start/End: Complemental strand, 33287521 - 33286688
Alignment:
| Q |
4 |
tagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgat |
103 |
Q |
| |
|
||||||| ||||||||| | ||||||||||| |||| ||| ||||||| ||| |||||| ||||||| |||||||||||| || ||||||| || |
|
|
| T |
33287521 |
tagattacatgatggtcccctcgatgcacaaaaggaaatcctacttcaaaccgtcggaatagaagaccatcatatatgcaatcgtcaccgtgcaactaat |
33287422 |
T |
|
| Q |
104 |
ttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggt |
203 |
Q |
| |
|
||||||| | |||||||| ||||||||| | |||| | |||||||||||||| |||| || |||||||||||||||||||| |||||||||||| || | |
|
|
| T |
33287421 |
ttgatacaaagtaggctacgtcgtgaaagggcccttcttattcttgataatgtagatcgagttgaacaattggaaaaaataggtgtgcatcgtgaatgtt |
33287322 |
T |
|
| Q |
204 |
taggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggac |
303 |
Q |
| |
|
|||| | |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||| ||| || ||| |
|
|
| T |
33287321 |
taggcgtaggtagtagaattattatcatttctagagatgagcatatattggaagagtatggagtggatgtagtctacaaagttccactcttggattggaa |
33287222 |
T |
|
| Q |
304 |
cgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaac |
403 |
Q |
| |
|
|| |||||| |||||||||| ||||||||||||| | ||||||||||||||||| | ||| ||| ||||| | |||||||||| ||||||||| |
|
|
| T |
33287221 |
tgaagctcacatgttattttgtcgaaaagctttcaaagaagagaaaattattatgagaaattatgaaagtttggtatatgagatactggattatgctaat |
33287122 |
T |
|
| Q |
404 |
ggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaata |
503 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||||||| ||| |
|
|
| T |
33287121 |
ggtctaccgttagcaattaaagtattgggctcatttttgtttggtcgtaatgtgacggaatggaagagtgcattgactagattaagagaaagtccagata |
33287022 |
T |
|
| Q |
504 |
atgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatcaga |
603 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||| |||| || |
|
|
| T |
33287021 |
atgatgtcatggatgtgctgcagttaagttttgatggtctaaaggagactgaaaaagaaatatttcttgatattgcttgttttttcaaccgcaaatcgga |
33286922 |
T |
|
| Q |
604 |
gaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattca |
703 |
Q |
| |
|
||||||| |||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||| || | | |
|
|
| T |
33286921 |
aaaatatgctaaaaacattctaaattgttgtagatttcatgctgatattggattaagagttcttattgataaatcacttatgaacattaatggtca---a |
33286825 |
T |
|
| Q |
704 |
gtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaa |
803 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||||||||||| | | | |||||||||||||| |||||| ||||||||| |||||||| | |
|
|
| T |
33286824 |
aatcttgaaatgcattctttgttggaagagctaggcagaaaaattgtgcaaaatagttcaagcaaagagccaagaaaatggagcaggttgtggtccacag |
33286725 |
T |
|
| Q |
804 |
aacaactctacaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
|||||||||||||||||| | ||||||| |||||||| |
|
|
| T |
33286724 |
aacaactctacaatgttatgttggagaatatggtaaa |
33286688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 4 - 840
Target Start/End: Complemental strand, 33264628 - 33263795
Alignment:
| Q |
4 |
tagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgat |
103 |
Q |
| |
|
||||||| ||||||||| | ||||||||||| ||||| ||| ||||||||| | |||||||||||||||||||||||||| ||| | |||||||||| |
|
|
| T |
33264628 |
tagattacatgatggtccaatagatgcacaaaagcaaatcctacatcaaactcttggcatagaacaccatcaaatatgcaatcattatagtgcaactgat |
33264529 |
T |
|
| Q |
104 |
ttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggt |
203 |
Q |
| |
|
|||||| || |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
33264528 |
ttgataagaaataggctaagtcgtgaaaagacccttctaattcttgataatgtggatcaagttgaacaattggaaagaataggtgtgcatcgtgaatggt |
33264429 |
T |
|
| Q |
204 |
taggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggac |
303 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||| |||||| ||||| || | |
|
|
| T |
33264428 |
taggtgcaggtagtagaatcgttatcatttcaagagatgaacatatattgaaagaatataaagtggatgtagtttacaaagtcccacttctgaattgggc |
33264329 |
T |
|
| Q |
304 |
cgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaac |
403 |
Q |
| |
|
||| ||||||| ||||||||| ||||||||||||| |||||||||||||||||||| ||| ||||||||| ||||||| |||| |||||||| |
|
|
| T |
33264328 |
cgaagctcacaagttattttgtagaaaagctttcaaagctgagaaaattattatgagtaattataaaaatttggcaaatgagatattgagatatgctaat |
33264229 |
T |
|
| Q |
404 |
ggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaata |
503 |
Q |
| |
|
||||| ||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||||| ||| |
|
|
| T |
33264228 |
ggtctaccactagcaattaaagtattgggttcatatttgtttggtcgtaatgtgactgaatggaagagtacattggctagtttgagagaaagtccagata |
33264129 |
T |
|
| Q |
504 |
atgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaacc---gcgaatc |
600 |
Q |
| |
|
||||||||||||||||| | || |||||||||||||| ||||| | |||||||||||||||||||| ||||||||||| |||||||||| |||| |
|
|
| T |
33264128 |
atgatgtcatggatgtgttgcaattaagttttgatgggctaaaggaaatggaaaaagaaatatttctcgatattgcttg-tttttcaacctttcggaat- |
33264031 |
T |
|
| Q |
601 |
agagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgat |
700 |
Q |
| |
|
||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||| || |
|
|
| T |
33264030 |
-gagaaatatgttaaaaacattttaaattgttgtggatttcatgctgatattggattaagtgttctcattgctaaatcacttataagcat---tagtaat |
33263935 |
T |
|
| Q |
701 |
tcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccc |
800 |
Q |
| |
|
||| ||| |||||||||||| ||| ||||||||| |||||||||||| | | | |||| ||||||||| |||||| ||||| ||| |||||||| |
|
|
| T |
33263934 |
tcaagaattataatgcattctttgttgcaagagctaggccgaaaaattgtgcaaaatagttcatgcaaagagccaagaaaatggagtaggttgtggtccg |
33263835 |
T |
|
| Q |
801 |
aaaaacaactctacaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
||||||| |||||||||||| ||||||||| |||||||| |
|
|
| T |
33263834 |
caaaacaattctacaatgttaagatggagaatatggtaaa |
33263795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 26 - 840
Target Start/End: Complemental strand, 9168731 - 9167917
Alignment:
| Q |
26 |
gatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtc |
125 |
Q |
| |
|
||||||||||| ||||| || |||||||||||| ||||||||||||||||||||||||||| |||| ||| || |||||||| |||||| ||| ||| |
|
|
| T |
9168731 |
gatgcacaaaagcaaatcttacttcaaactctcggcatagaacaccatcaaatatgcaatcgctacagtgccacaaatttgatatgacgtatactatgtc |
9168632 |
T |
|
| Q |
126 |
gtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataat |
225 |
Q |
| |
|
|||||| | |||| |||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||| || |
|
|
| T |
9168631 |
gtgaaagggccctcctgattcttgataatgttgatcaagttgaacaattggaaaaaatagatgtgcatcgtgaatggttaggtgtgggtagtagaattat |
9168532 |
T |
|
| Q |
226 |
tatcatttctagagatgagcatatattgaaagagtatggagt---ggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattt |
322 |
Q |
| |
|
|||| | ||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||| ||| || |||||| | |||||| |
|
|
| T |
9168531 |
tatcgtatcttgagatgagcatatattgaaagagtatggagtactggatgtagtttacaaagttccactcttgaatcagactgaatctcactagttattt |
9168432 |
T |
|
| Q |
323 |
tgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaatta |
422 |
Q |
| |
|
| || |||||||||||||| |||||||| ||||| |||| ||| |||||||||| | ||||||||| | |||||| || ||||| ||| ||||||||| |
|
|
| T |
9168431 |
tatcgaaaagctttcaaacttgagaaaactattagcagtaattatcaaaatttggcatatgagatacttaattatgcgaaaggtctaccattagcaatta |
9168332 |
T |
|
| Q |
423 |
aagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgct |
522 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||| |||| ||||||||||||||| | |
|
|
| T |
9168331 |
aagtattgggctcatttttgtttggtcgtaatgtgactgaatgcaagagtgcattggctagattgagacaaatcccagataaagatgtcatggatgtgtt |
9168232 |
T |
|
| Q |
523 |
acagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatcagagaaatatgtaaaaaacgtt |
622 |
Q |
| |
|
|| ||||||||||||| ||| | | | |||||| |||||||||||| |||||||||||||||||||| || ||||| ||||| || ||| || |
|
|
| T |
9168231 |
gcaactaagttttgatgggctagaggaaacggaaaaggaaatatttcttcatattgcttgttttttcaactcttggtccgagaactatgttaacaacatt |
9168132 |
T |
|
| Q |
623 |
ctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattcagtgattgaaatgcattctt |
722 |
Q |
| |
|
|||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||| ||||||||| || |
|
|
| T |
9168131 |
ctaaattgttgtggattttatgttgatattggattaagagttctcattgataaatcacttataagcattaa---ttattcagagattaaaatgcattatt |
9168035 |
T |
|
| Q |
723 |
tattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttac |
822 |
Q |
| |
|
| || | ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||| | |
|
|
| T |
9168034 |
tgttagaagagctgggcagaaaaattgtgcaagaaaattcaagcaaagagcaaagaaaatggagcaggttgtggtccaaaaaacaactctacaatgttgc |
9167935 |
T |
|
| Q |
823 |
gatggagaaaatggtaaa |
840 |
Q |
| |
|
|||||||| |||||||| |
|
|
| T |
9167934 |
gatggagagtatggtaaa |
9167917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 162; E-Value: 6e-86
Query Start/End: Original strand, 351 - 691
Target Start/End: Original strand, 28869219 - 28869559
Alignment:
| Q |
351 |
ttattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattgggctcatttttgtttggtcg |
450 |
Q |
| |
|
|||| ||||||| ||| |||||||||| || ||||||| ||||||||| ||||| || |||||||||| | ||||| ||||| |||||||||||| |
|
|
| T |
28869219 |
ttatcatgagtaattatcaaaatttggcaaatgtgatactggattatgctaaaggtctaccgctagcaattacaatattgtactcatatttgtttggtcg |
28869318 |
T |
|
| Q |
451 |
taatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcat |
550 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28869319 |
taatgtgactgaatggaagagtgcattggctagattgagagaaagtccagataatgatgtcatggatgtgctgcagttaagttttgatggtctaaatcat |
28869418 |
T |
|
| Q |
551 |
atggaaaaagaaatatttcttgatattgcttgttttttcaac-cgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgat |
649 |
Q |
| |
|
| ||||||||| ||||||||||||||| ||| ||||||||| | | | | |||||| || |||||| |||||||| ||||| |||||||||||| |
|
|
| T |
28869419 |
actgaaaaagaattatttcttgatattgtttgctttttcaactcttgga-ccgagaaaagagttaaaaacattctaaattgttgtgggtttcatgctgat |
28869517 |
T |
|
| Q |
650 |
attggattaagagttctcattgataaatcacttataagcatt |
691 |
Q |
| |
|
|||||||||| |||||||||||||||||| |||||||||||| |
|
|
| T |
28869518 |
attggattaaaagttctcattgataaatcccttataagcatt |
28869559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 2 - 207
Target Start/End: Original strand, 31567227 - 31567432
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
||||||| || ||||||||| | ||||||||||| ||||| ||| |||||||| | | |||||| ||||| ||||||||||||| ||||| || ||| |
|
|
| T |
31567227 |
tatagatcatatgatggtcccctcgatgcacaaaagcaaatcctacttcaaactgttggcatagatcaccaacaaatatgcaatcattacagcgccacta |
31567326 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
||||||||||| | |||||| ||||||||| | |||| |||||||||| ||||| ||||||| ||||||| |||||||||||| ||||| |||||| || |
|
|
| T |
31567327 |
atttgatacgaagaaggctatgtcgtgaaagggcccttctgattcttgaaaatgtagatcaagttgaacaaatggaaaaaatagttgtgcgtcgtgaatg |
31567426 |
T |
|
| Q |
202 |
gttagg |
207 |
Q |
| |
|
|||||| |
|
|
| T |
31567427 |
gttagg |
31567432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 957 - 1009
Target Start/End: Complemental strand, 33389098 - 33389046
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttgaatgatgatgatgt |
1009 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
33389098 |
gcaatgctttaggaaaggcatgttgaagccatagttttgaatgatgatgatgt |
33389046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 492
Target Start/End: Original strand, 13609635 - 13609719
Alignment:
| Q |
408 |
ttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagaga |
492 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||| |||||| |||| | ||||||| ||||||||||| ||||| ||||| |
|
|
| T |
13609635 |
ttccactagcaattgaagtgttgggctcatttttgtatggtcgagatgtctctgaatggagaagtgcattggccagattaagaga |
13609719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 957 - 1003
Target Start/End: Complemental strand, 9167829 - 9167783
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttgaatgatga |
1003 |
Q |
| |
|
||||| |||||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
9167829 |
gcaattctttaggaaaagcatgttgaagcaatagttttgaatgatga |
9167783 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 957 - 995
Target Start/End: Complemental strand, 33058623 - 33058585
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttg |
995 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33058623 |
gcaatgctttaggaaaagcatgttgaagccatagttttg |
33058585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 957 - 1003
Target Start/End: Complemental strand, 33286599 - 33286553
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttgaatgatga |
1003 |
Q |
| |
|
|||||||||||||||| ||||||| ||||| |||||||||||||||| |
|
|
| T |
33286599 |
gcaatgctttaggaaaagcatgttaaagccttagttttgaatgatga |
33286553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 131
Target Start/End: Complemental strand, 33360036 - 33359931
Alignment:
| Q |
26 |
gatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtc |
125 |
Q |
| |
|
||||||||||| |||| ||||||||||||||| |||||||||| || |||||||| || ||||| ||||||| |||||||| | | |||||| ||| |
|
|
| T |
33360036 |
gatgcacaaaagaaaatcctatttcaaactctcagcatagaacacaataaaatatgcgattgttaccatgcaactactttgatacaaaggaggctatgtc |
33359937 |
T |
|
| Q |
126 |
gtgaaa |
131 |
Q |
| |
|
||||| |
|
|
| T |
33359936 |
atgaaa |
33359931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 958 - 995
Target Start/End: Original strand, 33643636 - 33643673
Alignment:
| Q |
958 |
caatgctttaggaaatgcatgttgaagccatagttttg |
995 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
33643636 |
caatgctttaggaaaagcatgttgaagccatagttttg |
33643673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 959 - 1005
Target Start/End: Complemental strand, 33411021 - 33410975
Alignment:
| Q |
959 |
aatgctttaggaaatgcatgttgaagccatagttttgaatgatgatg |
1005 |
Q |
| |
|
||||| ||||||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
33411021 |
aatgcattaggaagagcatgttgaagccatatttttgaatgatgatg |
33410975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0428 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: scaffold0428
Description:
Target: scaffold0428; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 4 - 839
Target Start/End: Complemental strand, 8739 - 7907
Alignment:
| Q |
4 |
tagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgat |
103 |
Q |
| |
|
||||||| ||||||||| | ||||||||||| ||||| ||| ||||||||| | |||||||||||||||||||||||||| ||| | |||||||||| |
|
|
| T |
8739 |
tagattacatgatggtccaattgatgcacaaaagcaaatcctacatcaaactcttggcatagaacaccatcaaatatgcaatcattatagtgcaactgat |
8640 |
T |
|
| Q |
104 |
ttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggt |
203 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||| ||||| |||||||||||| |||| |
|
|
| T |
8639 |
ttgataagacataggctaagtcgtgaaaagacccttctaattcttgataatgtggatcaagttgaacaattggaaagaataggtgtgcatcgtgaatggt |
8540 |
T |
|
| Q |
204 |
taggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggac |
303 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||| |||||||||||||| ||| |||||| |||||||||||||||||||| ||| || |||| |
|
|
| T |
8539 |
taggtgcaggtagtagaatcgttatcatttcaagagatgaacatatattgaaagaatataaagtggatgtagtttacaaagttccactgttggattggac |
8440 |
T |
|
| Q |
304 |
cgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaac |
403 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||| | ||| |||||||||| | ||||||||||| ||| ||||| |
|
|
| T |
8439 |
cgagtctcacaagttattttgtcaaaaagctttcaaacttgagaaaattatcatgaaaaattatcaaaatttggcatatgagatactgaattacgctaat |
8340 |
T |
|
| Q |
404 |
ggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaata |
503 |
Q |
| |
|
||||| ||||||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| |
|
|
| T |
8339 |
ggtctaccactagcaattacagtattgggctcatttttgtctggtcgtaatgtgactgaatggaagagtgcattggctagactgagacaaagtccaaata |
8240 |
T |
|
| Q |
504 |
atgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaac-cgc-gaatca |
601 |
Q |
| |
|
| ||||||||||||||||| || ||||||| |||||| ||| | | | |||||||||||||||||||||||||||||||||||||||| | | |||| |
|
|
| T |
8239 |
aagatgtcatggatgtgcttcaattaagttatgatgggctagaggaaacggaaaaagaaatatttcttgatattgcttgttttttcaactctcggaat-- |
8142 |
T |
|
| Q |
602 |
gagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgatt |
701 |
Q |
| |
|
|||||| | | |||||| |||||||| ||||||||||| |||||||||||||| | ||||||||||||||||||||| |||| |||| | || || |
|
|
| T |
8141 |
gagaaaattattaaaaacattctaaattgttgtggatttcacgctgatattggatttatagttctcattgataaatcactaataaccattca---tggtt |
8045 |
T |
|
| Q |
702 |
cagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccca |
801 |
Q |
| |
|
|| | |||||||||||||||| |||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
8044 |
caattgttgaaatgcattctttgttggaagagttaggcagaaaaattgtgcaagaaaattcaagcaaagagcaaagaaagtggagcaggatgtggtccaa |
7945 |
T |
|
| Q |
802 |
aaaacaactctacaatgttacgatggagaaaatggtaa |
839 |
Q |
| |
|
| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
7944 |
acaacaactctacaatgttacgatggagaatatggtaa |
7907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 413; Significance: 0; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 2 - 840
Target Start/End: Original strand, 17438927 - 17439762
Alignment:
| Q |
2 |
tatagattatgtgatggtcctttggatgcacaaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactg |
101 |
Q |
| |
|
||||||||| ||||||||| | || |||||||| ||||| ||||||||||||| | |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
17438927 |
tatagattacatgatggtccacttgaagcacaaaagcaaatcatatttcaaactcttggcatagaacaccatcaaatatgcaatcgttacagtgcaacat |
17439026 |
T |
|
| Q |
102 |
atttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtg |
201 |
Q |
| |
|
|||||||||| | ||| ||| ||| ||||| | | || |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| || |
|
|
| T |
17439027 |
atttgatacggcatagactatgtcatgaaagggcacttctgattcttgataatgtggatcaagttgaacaattggaaaaaatagatgtgcatcttgaatg |
17439126 |
T |
|
| Q |
202 |
gttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgg |
301 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
17439127 |
gttaggtgcaggtagtagaatcattatcatttctagagatgagcatatattgaaaaagtatggagtggatgtagtttacaaagttccacttttgaattgg |
17439226 |
T |
|
| Q |
302 |
accgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgcta |
401 |
Q |
| |
|
| |||||| |||| |||||||||| ||||||||||||| |||||| ||||||||||||| ||| |||||||||| |||||||||||| ||||||| |
|
|
| T |
17439227 |
agagattcttacaagttattttgtcgaaaagctttcaaagttgagaacattattatgagtaattatcaaaatttggcaaatgagatactgagatatgcta |
17439326 |
T |
|
| Q |
402 |
acggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaa |
501 |
Q |
| |
|
| ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||| | |
|
|
| T |
17439327 |
atggtctaccactagcaattaaagtaatgggctcatttttgtttggttgtaatgtgactgaatggaagagtgcattggctagattgagagagagtccaga |
17439426 |
T |
|
| Q |
502 |
taatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatca |
601 |
Q |
| |
|
||| |||||||| || ||||| || |||||||||||||| ||||| |||| ||||| ||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
17439427 |
taaagatgtcatagacgtgctgcaattaagttttgatgggctaaagcatactgaaaaggaaatatttcttgatattgcttgttttttcaactctgaatgt |
17439526 |
T |
|
| Q |
602 |
gagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgatt |
701 |
Q |
| |
|
||||||||||| |||||| |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || | |
|
|
| T |
17439527 |
gagaaatatgttaaaaacattcttaattgttgtggatttcatgctgatattggattaagagttctcattaataaatcacttataagcattaatggtca-- |
17439624 |
T |
|
| Q |
702 |
cagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtccca |
801 |
Q |
| |
|
| ||||||||||||||||| |||| ||||| |||||||||||||||| | | | ||||||||| || | |||||| ||||||||| ||||||| |
|
|
| T |
17439625 |
-aaacattgaaatgcattctttgttggaagagctgggcagaaaaattgtgcaaaatagttcaagcaatgacccaagaaaatggagcaggttgtggtctac |
17439723 |
T |
|
| Q |
802 |
aaaacaactctacaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
| |||||||||| |||||| |||| |||||||||||| |
|
|
| T |
17439724 |
agaacaactctatgatgttattatggcgaaaatggtaaa |
17439762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 957 - 997
Target Start/End: Original strand, 17439856 - 17439896
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttgaa |
997 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17439856 |
gcaatgctttaggaaaagcatgttgaagccatagttttgaa |
17439896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 172; Significance: 7e-92; HSPs: 22)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 172; E-Value: 7e-92
Query Start/End: Original strand, 143 - 840
Target Start/End: Complemental strand, 31150179 - 31149485
Alignment:
| Q |
143 |
attcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatg |
242 |
Q |
| |
|
|||||||| ||||| ||||||| ||||||| | || ||| |||| ||| ||||||| ||||||||||| || |||||||| ||||| ||||||||||| | |
|
|
| T |
31150179 |
attcttgacaatgttgatcaagttgaacaactcgagaaattagccgtgaatcgtgaatggttaggtgcggggagtagaatcattataatttctagagacg |
31150080 |
T |
|
| Q |
243 |
agcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaaca |
342 |
Q |
| |
|
||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| || |||| | |||||| ||| |||||||||||||| |
|
|
| T |
31150079 |
agcatatcttgaaagagtatggagtggatgttgtttacaaagttccactcctgaatcggactgactctcttcaattatttagtcgaaaagctttcaaact |
31149980 |
T |
|
| Q |
343 |
tgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattgggctcatttttg |
442 |
Q |
| |
|
||| | ||||||||||||||| | || |||| | ||||||||| || |||||||| || || || ||||||||||||||||| ||||| |||||| |
|
|
| T |
31149979 |
tgatca---tattatgagtagttatgataagttggcatctgagatactaaggtatgctaatggcctacctctagcaattaaagtattaggctcgtttttg |
31149883 |
T |
|
| Q |
443 |
tttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtc |
542 |
Q |
| |
|
| || ||| ||| | |||||||| ||||||||||| |||||||||||||||||||| || ||| ||||||||||| | | |||||||||||||| |
|
|
| T |
31149882 |
tatgatcgaaatatttttgaatggaaaagtgcattggcaagattgagagaaagtccaaacaaagatatcatggatgtgttgcgattaagttttgatgggt |
31149783 |
T |
|
| Q |
543 |
taaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttca |
642 |
Q |
| |
|
| | | |||||||| ||||||||||| ||||||||||||||||||| | | ||||||||||| ||||| |||||||| ||||||||||| |
|
|
| T |
31149782 |
tggaggaaatggaaaaggaaatatttctccatattgcttgttttttcaaagggggtgaggagaaatatgttaaaaatgttctaaactgttgtggatttca |
31149683 |
T |
|
| Q |
643 |
tgctgatattggattaagagttctcattgataaatcacttataagcatt--aatagtgattcagtgattgaaatgcattctttattggttgagctaggca |
740 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||| ||||||||||| || || | | | |||||||| || ||| ||| ||||| |||| |
|
|
| T |
31149682 |
tgctgatattggattaagggttctaattgataaatccgttataagcatttcaacagaaaataa--tattgaaatacaccgtttgttgcaagagcttggca |
31149585 |
T |
|
| Q |
741 |
gaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgatggagaaaatggtaaa |
840 |
Q |
| |
|
|||||||||| | |||||| |||| ||||||| |||||||||||||||| ||||| ||| || ||| |||| ||||||| | |||||| |||||||| |
|
|
| T |
31149584 |
gaaaaattgttcaagaaaaatcaatcaaagagtcaagaaagtggagcaggatgtggctccacaagcaattctataatgttatgtcggagaatatggtaaa |
31149485 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 164; E-Value: 4e-87
Query Start/End: Original strand, 147 - 691
Target Start/End: Complemental strand, 31159076 - 31158535
Alignment:
| Q |
147 |
ttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagca |
246 |
Q |
| |
|
|||||||||| ||| ||| ||||||| | || ||| |||||||| ||||||| || ||||||||||| |||||||| |||| |||||||||||||| || |
|
|
| T |
31159076 |
ttgataatgttgataaagttgaacaacttgataaattagctgtgaatcgtgaatgcttaggtgcagggagtagaatcgttataatttctagagatgaaca |
31158977 |
T |
|
| Q |
247 |
tatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaacatgag |
346 |
Q |
| |
|
||| ||||||||||||||||| || |||||||||||||||||||| |||||| |||| | |||| | || |||||||||||||||||||||| ||| |
|
|
| T |
31158976 |
tatcttgaaagagtatggagttgatgtagtttacaaagttccactcttgaatgggactaactctcttcaattgttttgtcaaaaagctttcaaacttgat |
31158877 |
T |
|
| Q |
347 |
aaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattgggctcatttttgtttg |
446 |
Q |
| |
|
| |||||||||||||| | || ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||||||||| ||||||||||||| |
|
|
| T |
31158876 |
ca---tattatgagtagttttgataagttgacatttgacatactcagttatgctaatggtctaccgctagcaattaaagtattgggatcatttttgtttg |
31158780 |
T |
|
| Q |
447 |
gtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaa |
546 |
Q |
| |
|
|||| | | |||||||| |||||||||||||||||||| |||||||||| || ||| ||||||||||| | | ||||||||||| || || | |
|
|
| T |
31158779 |
gtcgagacatctatgaatggaaaagtgcattggctagattgagcaaaagtccaaacaaagatatcatggatgtgatgcgattaagttttgaagggttaga |
31158680 |
T |
|
| Q |
547 |
tcatatggaaaaagaaatatttcttgatattgcttgttttttca-accgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttcatgc |
645 |
Q |
| |
|
| |||||||||||||||||||||| |||||||||||||||| | | | | | ||| ||||| |||| ||||||||| ||||||||| ||||| |
|
|
| T |
31158679 |
aaaattggaaaaagaaatatttcttgacattgcttgttttttcattcagagcaaga-agatttatgtccaaaaagttctaaattgctgtggattccatgc |
31158581 |
T |
|
| Q |
646 |
tgatattggattaagagttctcattgataaatcacttataagcatt |
691 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||| |
|
|
| T |
31158580 |
tgatattggattaagagttctaattgataaatcacttctaagcatt |
31158535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 72 - 839
Target Start/End: Original strand, 31477143 - 31477907
Alignment:
| Q |
72 |
atcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaaca |
171 |
Q |
| |
|
|||| |||||||||| || || |||| || | ||||| ||||||| ||| ||||| ||| | ||| ||||| |||||||||| ||| ||| |||||| |
|
|
| T |
31477143 |
atcagatatgcaatctttccactgcatctaacttgattagacgtagactatgtcgtcaaagggtccttatgatttttgataatgttgataaagttgaaca |
31477242 |
T |
|
| Q |
172 |
attggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggac |
271 |
Q |
| |
|
| |||||||||||| ||| |||||| ||| |||||| || |||| ||| ||||| |||||||||||||||||||||||||| | |||||||| || |
|
|
| T |
31477243 |
actggaaaaaataggtgtttgtcgtgaatggctaggtgagggaagtaaaatcattataatttctagagatgagcatatattgaagaattatggagtagat |
31477342 |
T |
|
| Q |
272 |
gtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaa |
371 |
Q |
| |
|
| ||||||||||||||| || ||| || |||| | |||| | ||||| |||| |||||||||||||| ||| | |||| ||| |||||| || |
|
|
| T |
31477343 |
gaagtttacaaagttcctctcttggattggactaactctcttcaattattgtgtcgaaaagctttcaaacttgatca---tattttgaatagttatgaag |
31477439 |
T |
|
| Q |
372 |
atttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagag |
471 |
Q |
| |
|
|||| | || ||||| |||||| || || || ||||| ||||||||||||||||| ||||||||||||||||| || | | ||||||| || |
|
|
| T |
31477440 |
ggttggttaatggcatactacattatgccaatggcctaccacttgcaattaaagtattgggttcatttttgtttggtcgggatatatctgaatggagaag |
31477539 |
T |
|
| Q |
472 |
tgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttctt |
571 |
Q |
| |
|
||||||||||||| | | |||||||||| | || ||||| ||||||||| | | |||||||||||||| ||||| | ||||||||||||||||||| |
|
|
| T |
31477540 |
tgcattggctagactcaaagaaagtccagagaaggatgttatggatgtgttgcgattaagttttgatgggctaaaggagcaggaaaaagaaatatttctt |
31477639 |
T |
|
| Q |
572 |
gatattgcttgttttttcaaccgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattg |
671 |
Q |
| |
|
||||||||||||||||||| | | | | ||||||| | ||||| ||| ||||| |||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
31477640 |
catattgcttgttttttcaatcaagtttgggggaaatatcttaaaaatgttttaaattgttgtggatttcatgccgatattggattaagagttctcattg |
31477739 |
T |
|
| Q |
672 |
ataaatcacttataagcattaatagtgattcagtgattgaaatgcattctttattggttgagctaggcagaaaaattgtgcgagaaaattcaagcaaaga |
771 |
Q |
| |
|
|||||||||||||||||||| || ||| | | ||| | |||||| ||| |||| |||||||| ||| ||||||| | |||||||||||||||||| |
|
|
| T |
31477740 |
ataaatcacttataagcattgatgcagatggatttattcacatgcatggtttgttggaagagctagggagagaaattgttcaagaaaattcaagcaaaga |
31477839 |
T |
|
| Q |
772 |
gcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgatggagaaaatggtaa |
839 |
Q |
| |
|
||||||||| ||||| ||| | |||| | ||||||| || || |||| | | ||||||||||||||| |
|
|
| T |
31477840 |
gcaaagaaactggaggaggatatggttcgtaaaacaagtcaacgatgtcatgttggagaaaatggtaa |
31477907 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 32 - 840
Target Start/End: Original strand, 31497056 - 31497854
Alignment:
| Q |
32 |
caaaaacaaattctatttcaaactctcgacatagaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtcgtgaaa |
131 |
Q |
| |
|
||||| ||||||||| |||||||||| | |||||||||||| |||||||||| | |||| ||| || | ||||||||||| |||||| || || ||| |
|
|
| T |
31497056 |
caaaagcaaattctacatcaaactctcaatgaagaacaccatcatatatgcaatcttcacatcgcatctaacttgatacgacgcaggctatgttgtcaaa |
31497155 |
T |
|
| Q |
132 |
agaccctagtgattcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcat |
231 |
Q |
| |
|
| ||| ||||| |||||||||| ||| ||| ||||||||| |||||||||| ||| | |||||| ||||||| || ||||||| ||| |||||||| |
|
|
| T |
31497156 |
gtatccttttgatttttgataatgttgataaagttgaacaattagaaaaaatagttgttcgtcgtgattggttagatgtgggtagtaaaatcattatcat |
31497255 |
T |
|
| Q |
232 |
ttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctc-acaatttattttgtcaaaa |
330 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||| | |||||||||||||| |||||| || |||| | |||| || | ||||| |||| ||| |
|
|
| T |
31497256 |
ttctagagacgagcatatactgaaagagtatggagtggatgaggtttacaaagttcctcttttggattggactaactctcgacga-ttattatgtcgaaa |
31497354 |
T |
|
| Q |
331 |
agctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattg |
430 |
Q |
| |
|
|||||||||| ||| | |||| ||||| |||| || || | | || ||||| ||||| || || || ||||| ||||||||||||||| |
|
|
| T |
31497355 |
agctttcaaaattgatca---tattttgagtggttatgaagggttagttaatggcgtactgcattatgtcaatggcctaccactggcaattaaagtattg |
31497451 |
T |
|
| Q |
431 |
ggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaa |
530 |
Q |
| |
|
|| ||||||||||||| ||| || | | |||||| | |||||||||| ||||||||||||||||||||| || ||||||||||||||| | | | || |
|
|
| T |
31497452 |
ggttcatttttgtttgatcgggatataattgaatgggaaagtgcattggttagattgagagaaagtccaaacaaagatgtcatggatgtgttgcgttaaa |
31497551 |
T |
|
| Q |
531 |
gttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcgaatca-gagaaatatgtaaaaaacgttctaaatc |
629 |
Q |
| |
|
|||||||||| ||||| | || || |||||| | |||||| ||||||||||||||||||| | | || | | | ||||| ||||| ||||||||| |
|
|
| T |
31497552 |
gttttgatgggctaaacaagatagataaagaattgtttcttcatattgcttgttttttcaattg-gcataatgcaacgtatgttaaaaatgttctaaat- |
31497649 |
T |
|
| Q |
630 |
actgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcattaatagtgattcagtgattgaaatgcattctttattggt |
729 |
Q |
| |
|
||||||||||||| | |||| |||||||||||||||||||||||||||||| | ||||| ||| || |||| |||||||| | | ||| |
|
|
| T |
31497650 |
gttgtggatttcatgttcatatcggattaagagttctcattgataaatcacttgtgagcat------tgaggaagagattcaaatgcatgatatgttgca |
31497743 |
T |
|
| Q |
730 |
tgagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgatggag |
829 |
Q |
| |
|
|| ||||||||||| ||||| | ||||||||||||||| ||| |||||||||||||||| |||||| || ||||| ||||| |||||| | ||||| |
|
|
| T |
31497744 |
agaactaggcagaaatattgttcaagaaaattcaagcaaggagagaagaaagtggagcaggttgtggttgaaagaacaattctacgatgttatgttggag |
31497843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 192 - 589
Target Start/End: Complemental strand, 31019582 - 31019188
Alignment:
| Q |
192 |
atcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccact |
291 |
Q |
| |
|
||||||| || ||||||| ||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || | |||||||||||||||||| |
|
|
| T |
31019582 |
atcgtgaatgtttaggtgtagggagtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttccact |
31019483 |
T |
|
| Q |
292 |
tttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactg |
391 |
Q |
| |
|
|||||| |||| | |||| | ||||||||||||||||||||||||| ||| | |||||||||| |||| | || ||| |||| | || |
|
|
| T |
31019482 |
cttgaatgagaccaactctcttcaattattttgtcaaaaagctttcaaacttgatca---tattatgagtggttatgataaactggcacttgacacgcta |
31019386 |
T |
|
| Q |
392 |
agttatgctaacggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagag |
491 |
Q |
| |
|
|||||| || || || ||||||||||||||||||||||||||||||||||||||||| || | ||||||||| ||||||||||||||||||| || |
|
|
| T |
31019385 |
tcttatgccaatggcctaccactagcaattaaagtattgggctcatttttgtttggtcgagatatctccgaatggagaagtgcattggctagattgaaag |
31019286 |
T |
|
| Q |
492 |
aaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttc |
589 |
Q |
| |
|
|||||||||| || ||| | ||||||||| | | |||||||||||||| | | || |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31019285 |
aaagtccaaacaaagatattatggatgtgttgcgattaagttttgatggattggagaatttggaaaaagaaatatttcttgatattgcttgttttttc |
31019188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 203 - 691
Target Start/End: Complemental strand, 31029452 - 31028967
Alignment:
| Q |
203 |
ttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcgga |
302 |
Q |
| |
|
||||||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||| || | |||||||||||||||||| |||||| || |
|
|
| T |
31029452 |
ttaggtgcagggagtagaatcattataatttctagagatgagcatatcttgaatgagtatggagttgatgaagtttacaaagttccactcttgaatgaga |
31029353 |
T |
|
| Q |
303 |
ccgattctcacaatttattttgtcaaaaagctttcaaacatgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaa |
402 |
Q |
| |
|
|| | |||| | ||||||||||||||||||||||||| |||| | | |||||||| |||| | || ||| |||| | ||| |||||| || |
|
|
| T |
31029352 |
ccaactctcttcaattattttgtcaaaaagctttcaaacttgagca---tgttatgagtggttatgataaaatggcacttgacacactatcttatgccaa |
31029256 |
T |
|
| Q |
403 |
cggtcttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaat |
502 |
Q |
| |
|
|| || |||||||| |||||||||||||||||||||||||||||||| || | | ||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
31029255 |
tggcctaccactagctattaaagtattgggctcatttttgtttggtcgagatatctctgaatggagaagtaaattggctagattgagagaatgtccaatc |
31029156 |
T |
|
| Q |
503 |
aatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccgcga-atca |
601 |
Q |
| |
|
|| ||| | ||||||||| | | ||||||||||| || ||| | ||||||||||||| ||||||||||||||||||||||||||||| | | | || |
|
|
| T |
31029155 |
aaagatattatggatgtgttgcgattaagttttgaagggctagagaatatggaaaaagatatatttcttgatattgcttgttttttcaaagggtacaaca |
31029056 |
T |
|
| Q |
602 |
gagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagcatt |
691 |
Q |
| |
|
|| ||| ||| | ||| |||||||| |||| |||||||||||||| ||||||||| |||||||||||||||| |||||||||||| |
|
|
| T |
31029055 |
-aggaatgtgttacaaatattctaaattgtcgtgggtttcatgctgatatcggattaagaattctcattgataaatcccttataagcatt |
31028967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 103; E-Value: 1e-50
Query Start/End: Original strand, 143 - 690
Target Start/End: Complemental strand, 31528240 - 31527696
Alignment:
| Q |
143 |
attcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatg |
242 |
Q |
| |
|
|||||||||||||| |||||||| ||||||||||| ||| | ||| || | ||| || |||||||| || |||||||| ||||| ||||| |||||| |
|
|
| T |
31528240 |
attcttgataatgttgatcaaggagaacaattggagaaattggctttgaaccgtaagctgttaggtgttgggagtagaatcattataatttcgagagata |
31528141 |
T |
|
| Q |
243 |
agcatatattgaaagagtatggagtggacgtagtttacaaagttccacttttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaaca |
342 |
Q |
| |
|
||||| ||||| |||||||||||| ||||||| |||||||||||| ||||||| || |||||| | |||||||| ||| |||||||||||| |
|
|
| T |
31528140 |
ctcatatcttgaataggtatggagtggatgtagttttcaaagttccactcttgaatcaaactaattctcttcaattattttgccaacaagctttcaaacg |
31528041 |
T |
|
| Q |
343 |
tgagaaaattattatgagtagttaccaaaatttggattttgagatactgagttatgctaacggtcttccactagcaattaaagtattgggctcatttttg |
442 |
Q |
| |
|
||| || |||| |||||| ||| | | |||| | ||||||||| | ||||||||| || | |||||||| ||||||| |||||||||||||||| |
|
|
| T |
31528040 |
tgataa---tattttgagtaattatgacgagttggtatatgagatactaaattatgctaatggcttaccactagcgattaaagcattgggctcatttttg |
31527944 |
T |
|
| Q |
443 |
tttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtc |
542 |
Q |
| |
|
|||||||| || | ||||||| ||||||||| ||||||||||||| | |||||| || ||| || | ||||| | | || ||||||||||| | |
|
|
| T |
31527943 |
tttggtcgagatatttatgaatggagaagtgcattgactagattgagagacaatccaaacaaagatatcttcgatgtattgcgattgagttttgatgggc |
31527844 |
T |
|
| Q |
543 |
taaatcatatggaaaaagaaatatttcttgatattgcttgttttttcaaccg-cgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttc |
641 |
Q |
| |
|
|| | | |||||||||||||||||||| |||||||| ||||||||||| | || | || | | ||| ||||| || || ||| |||||||||| |
|
|
| T |
31527843 |
tagagaacatggaaaaagaaatatttctcgatattgcatgttttttcaatggacgtaaggaagcact-tgttaaaaatgtactgaattgttgtggatttc |
31527745 |
T |
|
| Q |
642 |
atgctgatattggattaagagttctcattgataaatcacttataagcat |
690 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
31527744 |
atgctgatattggattaagagttctcattgacaaatcacttataagcat |
31527696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 90; E-Value: 6e-43
Query Start/End: Original strand, 461 - 691
Target Start/End: Original strand, 31502651 - 31502882
Alignment:
| Q |
461 |
gaatggaagagtgcattggc-tagattgagagaaagtccaaataatgatgtcatggatgtgctacag-ttaagttttgatggtctaaatcatatggaaaa |
558 |
Q |
| |
|
|||||||| ||||||||||| |||||||||||| || || | || ||||||||||||||||| ||| |||||||||||||| ||| | | ||||| |
|
|
| T |
31502651 |
gaatggaaaagtgcattggcctagattgagagacagcccggacaaagatgtcatggatgtgct-cagattaagttttgatgggctagaggagtctgaaaa |
31502749 |
T |
|
| Q |
559 |
agaaatatttcttgatattgcttgttttttcaa-ccgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggatt |
657 |
Q |
| |
|
|||||||||||| ||||||||||||||||||| ||| | || ||||||||||| ||||| ||||||||| |||||||||||||||||||| ||||| |
|
|
| T |
31502750 |
ggaaatatttcttcatattgcttgttttttcaatccgagcatg-gagaaatatgttaaaaatgttctaaattgttgtggatttcatgctgatataggatt |
31502848 |
T |
|
| Q |
658 |
aagagttctcattgataaatcacttataagcatt |
691 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
31502849 |
aagagttctcattgataaatcacttataagcatt |
31502882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 187 - 341
Target Start/End: Original strand, 31489959 - 31490113
Alignment:
| Q |
187 |
tgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagtttacaaagtt |
286 |
Q |
| |
|
|||| ||||||| |||||||||||||| |||||||| ||||| |||||| ||||||| ||||| ||||||||||||||||| || |||||||||| |||| |
|
|
| T |
31489959 |
tgtgaatcgtgaatggttaggtgcagggagtagaatcattataatttctggagatgaacatatcttgaaagagtatggagttgatgtagtttacagagtt |
31490058 |
T |
|
| Q |
287 |
ccacttttgaatcggaccgattctcacaatttattttgtcaaaaagctttcaaac |
341 |
Q |
| |
|
||||| |||||| ||||| | |||| | ||||||| || |||||||||||||| |
|
|
| T |
31490059 |
ccactcttgaattggaccaactctcttcaattattttctctaaaagctttcaaac |
31490113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 64 - 303
Target Start/End: Original strand, 31502257 - 31502499
Alignment:
| Q |
64 |
agaacaccatcaaatatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaa |
163 |
Q |
| |
|
||||||| ||||||||||||||| || | |||| || | ||||| ||||| |||||| ||||| ||| | ||| ||||| |||||||||| ||| || |
|
|
| T |
31502257 |
agaacacaatcaaatatgcaatctttctactgcatctaacttgattcgacgcaggctatgtcgtcaaagggtccttttgatttttgataatgttgataaa |
31502356 |
T |
|
| Q |
164 |
ggtgaacaattggaaaaaatagctgtgcatc----gtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagag |
259 |
Q |
| |
|
| ||||||| |||||||||||| |||| | |||| |||||||||| ||||||| ||| ||||| ||||||||||||||||||||||||||| |
|
|
| T |
31502357 |
gttgaacaactggaaaaaataggtgtgtgtgtgtggtgaatggttaggtgg-ggtagtaaaatcattataatttctagagatgagcatatattgaaattt |
31502455 |
T |
|
| Q |
260 |
tatggagtggacgtagtttacaaagttccacttttgaatcggac |
303 |
Q |
| |
|
| ||||||||| | ||||||||||||||| |||||| ||||||| |
|
|
| T |
31502456 |
tttggagtggatgaagtttacaaagttcctcttttggatcggac |
31502499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 416 - 537
Target Start/End: Complemental strand, 31033577 - 31033457
Alignment:
| Q |
416 |
gcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaagtccaaataatgatgtcatgg |
515 |
Q |
| |
|
||||||||||||||||||||||||| || |||||| ||| | | ||||||| ||||||||||||||||||||||||| ||||||||| ||| | |||| |
|
|
| T |
31033577 |
gcaattaaagtattgggctcatttt-gtgtggtcgaaatatctctgaatggacaagtgcattggctagattgagagaaaatccaaataaagatattatgg |
31033479 |
T |
|
| Q |
516 |
atgtgctacagttaagttttga |
537 |
Q |
| |
|
||||||| | ||||||||||| |
|
|
| T |
31033478 |
atgtgctgcgattaagttttga |
31033457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 731 - 840
Target Start/End: Original strand, 31502940 - 31503049
Alignment:
| Q |
731 |
gagctaggcagaaaaattgtgcgagaaaattcaagcaaagagcaaagaaagtggagcagggtgtggtcccaaaaacaactctacaatgttacgatggaga |
830 |
Q |
| |
|
|||||||| ||||||||||| | |||||||||||||||||||| |||||||||||||||| |||||| ||| |||| || ||||||| | | |||||| |
|
|
| T |
31502940 |
gagctaggaagaaaaattgttcaagaaaattcaagcaaagagccaagaaagtggagcaggttgtggttagaaacacaagtcgacaatgtcatgttggaga |
31503039 |
T |
|
| Q |
831 |
aaatggtaaa |
840 |
Q |
| |
|
|||||||||| |
|
|
| T |
31503040 |
aaatggtaaa |
31503049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 470 - 687
Target Start/End: Original strand, 31483395 - 31483612
Alignment:
| Q |
470 |
agtgcattggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttc |
569 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| || || | ||||||| |||||||| ||||| |||| ||| | | | ||| |||||||||| |
|
|
| T |
31483395 |
agtgcattggctagattgggagaaagtccaaacaaaaatattatggatgccctacagtttggtttttatgggctagagaaaacagaatttgaaatatttc |
31483494 |
T |
|
| Q |
570 |
ttgatattgcttgttttttcaaccgcgaatcag-agaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctca |
668 |
Q |
| |
|
|||| || |||||||||||||| | | | || | |||| ||| ||||| ||| ||||| |||||||||||| |||||||||||||||||||||| |
|
|
| T |
31483495 |
ttgacatcgcttgttttttcaatgg-gcgtgaggaaaaatttgttaaaaatgttttaaattgttgtggatttcatcctgatattggattaagagttcttg |
31483593 |
T |
|
| Q |
669 |
ttgataaatcacttataag |
687 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
31483594 |
ttgataaatcacttataag |
31483612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 475 - 681
Target Start/End: Original strand, 31490244 - 31490450
Alignment:
| Q |
475 |
attggctagattgagagaaagtccaaataatgatgtcatggatgtgctacagttaagttttgatggtctaaatcatatggaaaaagaaatatttcttgat |
574 |
Q |
| |
|
|||| ||| ||||| || ||||||| |||| ||| | ||||||||||| ||||| ||||| ||| |||| | ||||||||||||||||||||| || |
|
|
| T |
31490244 |
attgactaaattgaaagtaagtccacataaagatattatggatgtgctgcagttgagtttaattgggctaatggagatggaaaaagaaatatttcttcat |
31490343 |
T |
|
| Q |
575 |
attgcttgttttttcaaccgcgaatcagagaaatatgtaaaaaacgttctaaatcactgtggatttcatgctgatattggattaagagttctcattgata |
674 |
Q |
| |
|
||||| ||||| |||||| | | ||| | ||||| ||||| ||||| || | |||||||||||||||||||| |||||||||||||| |||||| |
|
|
| T |
31490344 |
attgcatgtttcttcaacgggcgagaggaggactatgttaaaaatgttctgaactattgtggatttcatgctgatataggattaagagttcttgttgata |
31490443 |
T |
|
| Q |
675 |
aatcact |
681 |
Q |
| |
|
| ||||| |
|
|
| T |
31490444 |
actcact |
31490450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 77 - 303
Target Start/End: Complemental strand, 31161551 - 31161327
Alignment:
| Q |
77 |
atatgcaatcgttacattgcaactgatttgatacgacgtaggctaagtcgtgaaaagaccctagtgattcttgataatgtggatcaaggtgaacaattgg |
176 |
Q |
| |
|
|||||||||| ||||| |||| || | || | || | |||||||| || ||| |||| |||| | |||||||| ||||| ||||||| ||||||| | | |
|
|
| T |
31161551 |
atatgcaatctttacaatgcatctaactttaaacaaagtaggctatgtagtgtaaagtcccttttaattcttgacaatgttgatcaagttgaacaactcg |
31161452 |
T |
|
| Q |
177 |
aaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggagtggacgtagt |
276 |
Q |
| |
|
||||| |||||| | || ||| |||||| |||| || |||||||| ||||| | || ||||||||||||||| ||||||| || || ||||| || || |
|
|
| T |
31161451 |
aaaaactagctgag--tcatgaatggttatgtgcggggagtagaatcattataacttttagagatgagcatatcttgaaagtgtttgttgtggatgttgt |
31161354 |
T |
|
| Q |
277 |
ttacaaagttccacttttgaatcggac |
303 |
Q |
| |
|
|||||||||||| | |||||| |||| |
|
|
| T |
31161353 |
ctacaaagttccattgttgaatgggac |
31161327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 167 - 298
Target Start/End: Original strand, 31483092 - 31483223
Alignment:
| Q |
167 |
gaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatgagcatatattgaaagagtatggag |
266 |
Q |
| |
|
||||||||||| ||| |||||||| |||| | | |||| |||||| || ||||| ||||| ||| |||||||| ||||| ||| |||||||||||| |
|
|
| T |
31483092 |
gaacaattggagaaactagctgtgactcgtaaatcattagctgcagggagcagaatcattatagtttgtagagatgctcatatcttggaagagtatggag |
31483191 |
T |
|
| Q |
267 |
tggacgtagtttacaaagttccacttttgaat |
298 |
Q |
| |
|
|||||| | |||||||||||||| | |||||| |
|
|
| T |
31483192 |
tggacgcactttacaaagttccattcttgaat |
31483223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 957 - 1003
Target Start/End: Original strand, 31477988 - 31478034
Alignment:
| Q |
957 |
gcaatgctttaggaaatgcatgttgaagccatagttttgaatgatga |
1003 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||||||||| |||| |
|
|
| T |
31477988 |
gcaatgctttaggaaaagaatgttgaagccatagttttgaatcatga |
31478034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 261
Target Start/End: Complemental strand, 31033811 - 31033694
Alignment:
| Q |
144 |
ttcttgataatgtggatcaaggtgaacaattggaaaaaatagctgtgcatcgtgagtggttaggtgcaggtagtagaataattatcatttctagagatga |
243 |
Q |
| |
|
||||||||||||| ||||||| |||||| ||| ||| |||||||| | |||| || |||||||| || |||||||| |||| | ||||||||||| |
|
|
| T |
31033811 |
ttcttgataatgttgatcaagttgaacagcaggagaaattagctgtgagtagtgaatgtttaggtgctgggagtagaattgttataacttctagagatgt |
31033712 |
T |
|
| Q |
244 |
gcatatattgaaagagta |
261 |
Q |
| |
|
||||| ||||||||||| |
|
|
| T |
31033711 |
tcatatcttgaaagagta |
31033694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 958 - 999
Target Start/End: Original strand, 31483839 - 31483880
Alignment:
| Q |
958 |
caatgctttaggaaatgcatgttgaagccatagttttgaatg |
999 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||| |
|
|
| T |
31483839 |
caatgctttaggaaaagaatgttgaagccatagttttgaatg |
31483880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 632 - 688
Target Start/End: Complemental strand, 31019145 - 31019089
Alignment:
| Q |
632 |
tgtggatttcatgctgatattggattaagagttctcattgataaatcacttataagc |
688 |
Q |
| |
|
|||||||||||| | ||||| ||||||||| |||| ||||||||||| ||||||||| |
|
|
| T |
31019145 |
tgtggatttcatccagatatcggattaagaattcttattgataaatcccttataagc |
31019089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 410 - 446
Target Start/End: Complemental strand, 31161223 - 31161187
Alignment:
| Q |
410 |
ccactagcaattaaagtattgggctcatttttgtttg |
446 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||| |
|
|
| T |
31161223 |
ccactagcaattaaagtattgggctcttttttgtttg |
31161187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 407 - 494
Target Start/End: Original strand, 31245583 - 31245670
Alignment:
| Q |
407 |
cttccactagcaattaaagtattgggctcatttttgtttggtcgtaatgtgaccgaatggaagagtgcattggctagattgagagaaa |
494 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||| ||| || |||| | ||||||| ||||||||||| || || ||||||| |
|
|
| T |
31245583 |
cttccattagcaattaaagttttgggctcatttttgtatggccgagatgtctctgaatggagaagtgcattggcaaggttaagagaaa |
31245670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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