View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4857_low_10 (Length: 263)
Name: NF4857_low_10
Description: NF4857
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4857_low_10 |
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Alignment Details
Target: chr1 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 3822248 - 3822490
Alignment:
| Q |
1 |
atgtactatagctactacctcattgctgacaaaagtgaaggtcactcaactcaaagtcctactaatcattcaacttggagaaacaacgtagtgtaacagt |
100 |
Q |
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| T |
3822248 |
atgtactatagctactacctcattgctgacaaaagtgaaggtcactcaactcaaagtcctactaatcattcaacttggagaaacaacgtagtgtaacagt |
3822347 |
T |
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| Q |
101 |
aacatgaacgaaagatattgccaatatgaattctattatgactatctatagtttataaaagtgattataattgaaaacgattggttcattgaaaaatcaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3822348 |
aacatgaacgaaagatattgccaatatgaattctattatgactatctatag-ttataaaagtgattataattgaaaacgattggttcattgaaaaatcaa |
3822446 |
T |
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| Q |
201 |
ccacttttcaatttgataccaattatatcttgaaacatgaatgg |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3822447 |
ccacttttcaatttgataccaattatatcttgaaacatgaatgg |
3822490 |
T |
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