View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4858-Insertion-3 (Length: 441)
Name: NF4858-Insertion-3
Description: NF4858
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4858-Insertion-3 |
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Alignment Details
Target: chr7 (Bit Score: 414; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 414; E-Value: 0
Query Start/End: Original strand, 8 - 429
Target Start/End: Original strand, 43972138 - 43972559
Alignment:
| Q |
8 |
cttcaaagagtacttactatatgggaaaccagtcaaagacaagtgtggatggagttcacagcgatgtaaaggttttggagatgaaaactagaaggagtaa |
107 |
Q |
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| T |
43972138 |
cttcaaagagtacttactatatgggaaaccagtcaaagacaagtgtggatggagttcacagcgatgtaaaggttttggagatgaaaactaaaaggagtaa |
43972237 |
T |
|
| Q |
108 |
tgttttagatgtgttgcttagggttcttggtttcttgcttactctcactgctactatcattgtgggttttggcaaggagactaaggtcatttcatacgct |
207 |
Q |
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| T |
43972238 |
tgttttagatgtgttgcttagggttcttggtttcttgcttactctcactgctactatcattgtgggttttggcaaggagactaaggtcatttcatacgct |
43972337 |
T |
|
| Q |
208 |
tcattgcaattcaaagttactgctaagtgggaatatatgtctgctattgtgtaagctcatcacatctcttcctctctactaagggcaagtaggtctcatg |
307 |
Q |
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| T |
43972338 |
tcattgcaattcaaagttactgctaagtgggaatatatgtctgctattgtgtaagctcatcacatctcttcctctctactaagggcaagtagttctcatg |
43972437 |
T |
|
| Q |
308 |
ttttgtattttctttttataggtcaagctaacaagtgccctaatagcactaattaagataacaaaaaatagaaaattttaaatttatttcattaacaatt |
407 |
Q |
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| T |
43972438 |
ttttgtattttctttttataggtcaagctaacaagtgccctaatagcactaattaagataacaaaaaatagaaaattttaaatttatttcattaacaatt |
43972537 |
T |
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| Q |
408 |
gctatatataagggttctcttt |
429 |
Q |
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| T |
43972538 |
gctatatataagggttctcttt |
43972559 |
T |
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