View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4859-Insertion-8 (Length: 247)

Name: NF4859-Insertion-8
Description: NF4859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4859-Insertion-8
NF4859-Insertion-8
[»] chr7 (33 HSPs)
chr7 (91-243)||(17843442-17843595)
chr7 (11-72)||(15171005-15171066)
chr7 (11-81)||(17831036-17831106)
chr7 (7-75)||(3585763-3585831)
chr7 (7-70)||(25692578-25692641)
chr7 (11-72)||(10585428-10585489)
chr7 (7-65)||(9767574-9767632)
chr7 (7-72)||(1589027-1589092)
chr7 (25-74)||(8309977-8310026)
chr7 (7-75)||(20175884-20175952)
chr7 (7-70)||(10418346-10418409)
chr7 (18-57)||(24751454-24751493)
chr7 (11-65)||(3736132-3736186)
chr7 (18-75)||(9288710-9288767)
chr7 (18-75)||(9298502-9298559)
chr7 (7-72)||(9501802-9501867)
chr7 (7-72)||(21233893-21233958)
chr7 (23-59)||(21428602-21428638)
chr7 (7-59)||(39270527-39270579)
chr7 (18-72)||(6039539-6039593)
chr7 (11-57)||(13281985-13282031)
chr7 (7-56)||(23298142-23298191)
chr7 (7-75)||(5471969-5472038)
chr7 (18-59)||(9917967-9918008)
chr7 (18-59)||(9925879-9925920)
chr7 (18-75)||(10332205-10332262)
chr7 (22-59)||(26249331-26249368)
chr7 (31-75)||(5047072-5047116)
chr7 (11-59)||(7399132-7399180)
chr7 (25-65)||(8317329-8317369)
chr7 (27-59)||(8317694-8317726)
chr7 (27-59)||(13252910-13252942)
chr7 (27-59)||(13287963-13287995)
[»] chr6 (26 HSPs)
chr6 (106-247)||(28110575-28110716)
chr6 (9-65)||(6629223-6629279)
chr6 (18-72)||(8246427-8246481)
chr6 (19-72)||(9898110-9898163)
chr6 (7-75)||(13216545-13216613)
chr6 (25-65)||(17295935-17295975)
chr6 (11-75)||(32759763-32759827)
chr6 (18-73)||(8038292-8038347)
chr6 (19-65)||(2588097-2588143)
chr6 (7-59)||(12991481-12991533)
chr6 (7-59)||(13022108-13022160)
chr6 (18-75)||(14726928-14726985)
chr6 (30-75)||(21060642-21060687)
chr6 (30-75)||(21079959-21080004)
chr6 (7-67)||(10822027-10822087)
chr6 (20-72)||(19246079-19246131)
chr6 (23-59)||(22404509-22404545)
chr6 (11-53)||(21547028-21547070)
chr6 (11-75)||(3357936-3358001)
chr6 (7-72)||(21687371-21687436)
chr6 (7-56)||(23230224-23230273)
chr6 (30-75)||(30356076-30356121)
chr6 (21-57)||(9387421-9387457)
chr6 (27-59)||(21152745-21152777)
chr6 (7-59)||(27123081-27123133)
chr6 (7-59)||(31879070-31879122)
[»] chr4 (28 HSPs)
chr4 (106-247)||(19863167-19863308)
chr4 (7-72)||(19927067-19927132)
chr4 (11-72)||(9849949-9850010)
chr4 (11-75)||(16669960-16670024)
chr4 (18-65)||(25024907-25024954)
chr4 (18-72)||(5685439-5685493)
chr4 (11-65)||(17277640-17277694)
chr4 (11-65)||(19094040-19094094)
chr4 (22-59)||(16928728-16928765)
chr4 (21-66)||(26114449-26114494)
chr4 (7-59)||(8968327-8968379)
chr4 (19-74)||(10236391-10236446)
chr4 (7-77)||(9263555-9263625)
chr4 (18-72)||(23083502-23083556)
chr4 (18-75)||(15047574-15047631)
chr4 (18-75)||(15106793-15106850)
chr4 (11-55)||(22345871-22345915)
chr4 (23-73)||(1832294-1832344)
chr4 (7-57)||(19547308-19547358)
chr4 (11-72)||(5691549-5691610)
chr4 (23-56)||(11782285-11782318)
chr4 (18-75)||(19883717-19883774)
chr4 (18-59)||(22527746-22527787)
chr4 (9-57)||(10108039-10108087)
chr4 (25-65)||(14573256-14573296)
chr4 (7-59)||(17711095-17711147)
chr4 (31-59)||(25096114-25096142)
chr4 (27-59)||(37741409-37741441)
[»] scaffold0014 (1 HSPs)
scaffold0014 (106-247)||(64758-64899)
[»] chr1 (27 HSPs)
chr1 (106-247)||(21021579-21021720)
chr1 (7-72)||(24282791-24282856)
chr1 (18-72)||(16114601-16114655)
chr1 (7-65)||(7881583-7881642)
chr1 (23-75)||(12011423-12011475)
chr1 (7-57)||(20033375-20033425)
chr1 (11-72)||(9783222-9783283)
chr1 (7-72)||(35133674-35133739)
chr1 (7-59)||(15542564-15542616)
chr1 (11-59)||(16113325-16113373)
chr1 (11-59)||(21663346-21663394)
chr1 (11-55)||(21848426-21848470)
chr1 (11-75)||(26022188-26022252)
chr1 (21-57)||(27911868-27911904)
chr1 (18-65)||(16363423-16363470)
chr1 (11-70)||(25959702-25959760)
chr1 (7-50)||(44796907-44796950)
chr1 (7-72)||(15811687-15811752)
chr1 (7-72)||(16786336-16786401)
chr1 (27-60)||(18734837-18734870)
chr1 (7-52)||(25402695-25402740)
chr1 (18-75)||(26101660-26101717)
chr1 (7-59)||(9403129-9403181)
chr1 (7-59)||(14782319-14782371)
chr1 (11-59)||(15571944-15571992)
chr1 (18-66)||(18100024-18100072)
chr1 (7-58)||(18827194-18827245)
[»] chr8 (26 HSPs)
chr8 (7-73)||(24380594-24380660)
chr8 (7-75)||(7984905-7984974)
chr8 (18-72)||(30117900-30117954)
chr8 (11-59)||(15176687-15176735)
chr8 (24-70)||(19785024-19785070)
chr8 (19-65)||(24381575-24381621)
chr8 (24-70)||(37527268-37527314)
chr8 (7-72)||(14271631-14271696)
chr8 (18-75)||(18007344-18007401)
chr8 (21-73)||(15058744-15058796)
chr8 (27-59)||(24091131-24091163)
chr8 (7-75)||(28858626-28858694)
chr8 (11-54)||(22501628-22501671)
chr8 (7-65)||(19791184-19791242)
chr8 (13-59)||(24091611-24091657)
chr8 (30-72)||(30487659-30487701)
chr8 (11-65)||(30832732-30832786)
chr8 (21-74)||(2638523-2638576)
chr8 (23-72)||(4007394-4007443)
chr8 (21-54)||(13833863-13833896)
chr8 (7-59)||(23868085-23868138)
chr8 (21-70)||(24851178-24851227)
chr8 (11-59)||(14076916-14076964)
chr8 (27-59)||(24389566-24389598)
chr8 (23-59)||(24518842-24518878)
chr8 (7-75)||(34499079-34499147)
[»] chr5 (23 HSPs)
chr5 (7-65)||(17469807-17469865)
chr5 (18-71)||(26315022-26315075)
chr5 (7-75)||(25572701-25572769)
chr5 (11-65)||(24265528-24265582)
chr5 (11-65)||(24342159-24342213)
chr5 (7-72)||(19761822-19761887)
chr5 (7-75)||(25920622-25920690)
chr5 (18-72)||(18939321-18939375)
chr5 (7-72)||(18832012-18832077)
chr5 (18-55)||(24261873-24261910)
chr5 (7-75)||(107897-107965)
chr5 (11-59)||(23338734-23338782)
chr5 (7-59)||(24658555-24658607)
chr5 (7-70)||(18227402-18227465)
chr5 (25-59)||(20860147-20860181)
chr5 (23-65)||(24188694-24188736)
chr5 (30-72)||(24263993-24264035)
chr5 (30-72)||(24340623-24340665)
chr5 (7-57)||(28254691-28254741)
chr5 (27-59)||(19052911-19052943)
chr5 (11-66)||(24162259-24162314)
chr5 (7-59)||(26122198-26122250)
chr5 (7-59)||(26253260-26253312)
[»] chr3 (24 HSPs)
chr3 (7-72)||(13906825-13906890)
chr3 (11-72)||(18735512-18735573)
chr3 (11-71)||(22470648-22470708)
chr3 (23-74)||(20891883-20891934)
chr3 (7-65)||(23054825-23054883)
chr3 (11-72)||(820087-820148)
chr3 (12-65)||(3429472-3429525)
chr3 (23-59)||(11636229-11636265)
chr3 (23-71)||(19388093-19388141)
chr3 (7-52)||(3114971-3115016)
chr3 (25-70)||(17134899-17134944)
chr3 (18-75)||(20886670-20886727)
chr3 (11-71)||(6075765-6075825)
chr3 (7-75)||(8145037-8145105)
chr3 (11-71)||(22246791-22246851)
chr3 (7-59)||(25851204-25851255)
chr3 (18-59)||(19912379-19912420)
chr3 (7-59)||(6292149-6292201)
chr3 (27-55)||(8881636-8881664)
chr3 (7-70)||(19170385-19170449)
chr3 (7-71)||(25530971-25531035)
chr3 (23-59)||(27853170-27853206)
chr3 (7-75)||(31284535-31284603)
chr3 (23-59)||(34276695-34276731)
[»] chr2 (24 HSPs)
chr2 (11-72)||(11464557-11464618)
chr2 (7-72)||(17891520-17891585)
chr2 (22-75)||(34580013-34580066)
chr2 (22-75)||(34585762-34585815)
chr2 (7-59)||(18758090-18758142)
chr2 (18-75)||(20175613-20175670)
chr2 (7-72)||(26651877-26651942)
chr2 (22-71)||(27420877-27420926)
chr2 (7-56)||(32086817-32086866)
chr2 (27-59)||(18120803-18120835)
chr2 (23-59)||(21905531-21905567)
chr2 (23-75)||(22378068-22378120)
chr2 (11-55)||(27907782-27907826)
chr2 (23-59)||(28930079-28930115)
chr2 (7-70)||(28766653-28766716)
chr2 (18-72)||(18553098-18553152)
chr2 (11-57)||(32438937-32438983)
chr2 (30-75)||(8501749-8501794)
chr2 (7-56)||(25938339-25938388)
chr2 (30-75)||(34369140-34369185)
chr2 (7-56)||(36191325-36191374)
chr2 (27-59)||(25922416-25922448)
chr2 (11-59)||(29032675-29032723)
chr2 (11-59)||(29834660-29834708)
[»] scaffold0451 (1 HSPs)
scaffold0451 (9-65)||(10341-10397)
[»] scaffold0024 (1 HSPs)
scaffold0024 (11-74)||(41132-41195)
[»] scaffold0062 (1 HSPs)
scaffold0062 (11-71)||(41778-41838)
[»] scaffold0386 (2 HSPs)
scaffold0386 (11-72)||(5077-5138)
scaffold0386 (11-65)||(13724-13778)
[»] scaffold0352 (1 HSPs)
scaffold0352 (170-235)||(1736-1801)
[»] scaffold0043 (1 HSPs)
scaffold0043 (7-72)||(88678-88743)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-55)||(95413-95461)
[»] scaffold0111 (1 HSPs)
scaffold0111 (23-70)||(21282-21329)
[»] scaffold1017 (1 HSPs)
scaffold1017 (23-57)||(405-439)
[»] scaffold0555 (1 HSPs)
scaffold0555 (27-59)||(6265-6297)
[»] scaffold0086 (1 HSPs)
scaffold0086 (7-75)||(13032-13100)
[»] scaffold0032 (1 HSPs)
scaffold0032 (27-59)||(93083-93115)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-65)||(244080-244120)


Alignment Details
Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 91 - 243
Target Start/End: Original strand, 17843442 - 17843595
Alignment:
Q  91 tgttgaacttaagtttgttgaacttgaactt-gtctcatacttatggcttgtaccaatttggagagtgcttccatttgtttactcatcaaggtctgatta 189  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  17843442 tgttgaacttaagtttgttgaacttgaactttgtctcatacttatggcttgtaccaatttggagagtgcatccatttgtttactcatcaaggtctgatta 17843541  T
Q  190 gccaggataacactattctcattcacttcaagcactcgtatctcacattggtca 243  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17843542 accaggataacactattctcattcacttcaagcactcgtatctcacattggtca 17843595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 15171066 - 15171005
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  15171066 aattcctccctttgtaaagtcttctgaggcctcttgaatcttcattcttcatcttcccaagg 15171005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 81
Target Start/End: Original strand, 17831036 - 17831106
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtctatcaaa 81  Q
    |||||| |||| ||||||||||||||| ||||||||||||||||||||| ||||| |||| ||||||||||    
T  17831036 aattcctccctctgtaaagtcttctgaagcctcttgaatcttcattcttgatcttcccaatgtctatcaaa 17831106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 3585831 - 3585763
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| ||| ||||||||||||||||| ||||||||||||||||||||| |||| |||| ||||    
T  3585831 acataattcctcccattgtaaagtcttctgagacctcttgaatcttcattcttattcttcccaaagtct 3585763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 25692578 - 25692641
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||||||| || ||||| ||||    
T  25692578 acataattcctcccattgtaaagtcttctgaggcctcttgaatcttcatttttgatcttcccaa 25692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 10585489 - 10585428
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||| ||||||    
T  10585489 aattcctccctttgtaaagtcttctgagaccttttgaatcttcattcttcatcttcccaagg 10585428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 9767574 - 9767632
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||||||||||| |||||    
T  9767574 acataattcctccccctgtaaagtcttctgatgcctcttgaatcttcattcttcatctt 9767632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 1589027 - 1589092
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| || | |||||||||||||||||| | |||||||||||||||| ||||| ||||||    
T  1589027 acataattcctccttctgtaaagtcttctgaggcatgttgaatcttcattcttcatcttcccaagg 1589092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 25 - 74
Target Start/End: Complemental strand, 8310026 - 8309977
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtc 74  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  8310026 taaagtcttatgaggcctcttgaatcttcattcttcatcttcccaaggtc 8309977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 20175884 - 20175952
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| |||||||||  |||||| |||||||||||||||||||||| | ||||| |||| ||||    
T  20175884 acataattcctccctttgtattgtcttccgaggcctcttgaatcttcattcatgatcttcccaaagtct 20175952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 10418346 - 10418409
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||| | || ||||||||||||||||||| |||||||||||| | |||| ||||||||||    
T  10418346 acataatttctccttttgtaaagtcttctgaggtctcttgaatcttgaatcttcatctttccaa 10418409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 57
Target Start/End: Complemental strand, 24751493 - 24751454
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24751493 ccctttgtaatgtcttctgaggcctcttgaatcttcattc 24751454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 3736132 - 3736186
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| |||| |||| ||||| |||||||||||||||||||||||||| |||||    
T  3736132 aattcctccctctgtatagtctcctgaggcctcttgaatcttcattcttcatctt 3736186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 9288710 - 9288767
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||| |||||||||||||| |||||||||| |||||  ||||||||    
T  9288710 ccctctgtaaagtcttatgaggcctcttgaaccttcattcttgatcttctcaaggtct 9288767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 9298502 - 9298559
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||| |||||||||||||| |||||||||| |||||  ||||||||    
T  9298502 ccctctgtaaagtcttatgaggcctcttgaaccttcattcttgatcttctcaaggtct 9298559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 9501802 - 9501867
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| |||||  | || ||||||||||||||||||||||||| ||||| ||||||    
T  9501802 acataattcctccctctgtaacatattttgaggcctcttgaatcttcattctttatcttcccaagg 9501867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 21233893 - 21233958
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| ||| | |||||||||||||| | || |||||||||||||||||||| |||||| |||||    
T  21233893 acataactcctcgctttgtaaagtcttttaagacctcttgaatcttcattcttcatcttttcaagg 21233958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 21428602 - 21428638
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||| |||||||||||||||||||||||||    
T  21428602 tgtaaagtcttttgaggcctcttgaatcttcattctt 21428638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 39270579 - 39270527
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||| || |||| |||||||||| | ||||||||||||||||||||||||    
T  39270579 acataatacctccctatgtaaagtctcccgaggcctcttgaatcttcattctt 39270527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 6039593 - 6039539
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| ||||| || || ||||||||||||||||||||||||| ||||| ||||||    
T  6039593 ccctctgtaaggtattatgaggcctcttgaatcttcattctttatcttcccaagg 6039539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 13282031 - 13281985
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||| ||||||||||  |||| |||||||||||||||||||||||    
T  13282031 aattcctccctttgtaatatcttttgaggcctcttgaatcttcattc 13281985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 23298142 - 23298191
Alignment:
Q  7 acataattcccccct-ttgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    |||||||||| |||| |||||| ||||||||||||||||||||||||||||    
T  23298142 acataattcctccctattgtaa-gtcttctgaggcctcttgaatcttcatt 23298191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 5472038 - 5471969
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattct-taatctttccaaggtct 75  Q
    |||||||||| |||||||||| ||||| ||  || ||||||||||||||||| | || ||||||||||||    
T  5472038 acataattcctccctttgtaatgtcttatggagcatcttgaatcttcattctctcatttttccaaggtct 5471969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 9917967 - 9918008
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  9917967 ccctatgtaatgtcttttgaggcctcttgaatcttcattctt 9918008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 9925879 - 9925920
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||| ||||| ||||| |||||||||||||||||||||||||    
T  9925879 ccctatgtaatgtcttttgaggcctcttgaatcttcattctt 9925920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 10332205 - 10332262
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||| || |||| ||||||||||||||||||||||| ||||| |||| ||||    
T  10332205 ccctctgtaacgtgttctaaggcctcttgaatcttcattcttgatcttcccaaagtct 10332262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 59
Target Start/End: Complemental strand, 26249368 - 26249331
Alignment:
Q  22 ttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||| |||| |||||||||||||||||||||    
T  26249368 ttgtaaagtctcctgaagcctcttgaatcttcattctt 26249331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 5047116 - 5047072
Alignment:
Q  31 cttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||||||||||||||||||| || ||||| |||| ||||    
T  5047116 cttctgaggcctcttgaatcttcattattgatcttcccaaagtct 5047072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 7399132 - 7399180
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||| |||||||||||  |||||||||||||||| ||||||    
T  7399132 aattcctcccttcgtaaagtcttcataggcctcttgaatctttattctt 7399180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 8317369 - 8317329
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||||||| ||||||||||||||| ||||||||| |||||    
T  8317369 taaagtcttttgaggcctcttgaattttcattcttcatctt 8317329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 8317726 - 8317694
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||| ||||||    
T  8317726 aagtcttctgaggcctcttgaatctttattctt 8317694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 13252942 - 13252910
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||| |||||||||||||||||||||||    
T  13252942 aagtcttctaaggcctcttgaatcttcattctt 13252910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 13287995 - 13287963
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||| ||||||    
T  13287995 aagtcttctgaggcctcttgaatctttattctt 13287963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 2e-36; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 28110575 - 28110716
Alignment:
Q  106 tgttgaacttgaacttgtctcatacttatggcttgtaccaatttggagagtgcttccatttgtttactcatcaaggtctgattagccaggataacactat 205  Q
    ||||||| |||||||||||| |||||||||||||||||| |||| || |||||||| ||||||||||||||||| | |||| ||||||||| || |||||    
T  28110575 tgttgaatttgaacttgtcttatacttatggcttgtacctattttgaaagtgcttctatttgtttactcatcaatgcctgactagccaggacaatactat 28110674  T
Q  206 tctcattcacttcaagcactcgtatctcacattggtcaatct 247  Q
    ||||||||||| ||||||||| | |||||| ||| |||||||    
T  28110675 tctcattcactccaagcactcctttctcactttgctcaatct 28110716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 6629279 - 6629223
Alignment:
Q  9 ataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  6629279 ataattcctccctttgtaaagtcttctgaggcctcttgaatcttcattcttcatctt 6629223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 8246427 - 8246481
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||    
T  8246427 ccctctgtaaagtcttccgaggcctcttgaatcttcattcttcatcttcccaagg 8246481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 72
Target Start/End: Complemental strand, 9898163 - 9898110
Alignment:
Q  19 cctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||| ||||||    
T  9898163 cctttgtaaattcttctgaggcctcttgaatctttattcttcatcttcccaagg 9898110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 13216613 - 13216545
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||| | ||||||||||||| || ||| ||||||||||||||||||||| | ||| |||||||||    
T  13216613 acataatttctccctttgtaaagttttatgatgcctcttgaatcttcattcttgaccttcccaaggtct 13216545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 17295975 - 17295935
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  17295975 taaagtcttatgaggcctcttgaatcttcattcttaatctt 17295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 32759763 - 32759827
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||| |||||||||| |||||| ||||||||||||||||||| || | ||||| |||||||||    
T  32759763 aattcctccctttgtaacgtcttccgaggcctcttgaatcttcactcatgatcttcccaaggtct 32759827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 8038347 - 8038292
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggt 73  Q
    |||| |||||| |||| ||||||||||||||||||||||||| ||||| |||||||    
T  8038347 ccctctgtaaaatcttatgaggcctcttgaatcttcattcttgatcttcccaaggt 8038292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 2588097 - 2588143
Alignment:
Q  19 cctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||| |||||| |||||||||||||||||||||||||||| |||||    
T  2588097 cctttataaagttttctgaggcctcttgaatcttcattcttgatctt 2588143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 12991481 - 12991533
Alignment:
Q  7 acataattcccccct-ttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  12991481 acataattcctccctgttgtaa-gtcttctgaggcctcttgaatcttcattctt 12991533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 13022108 - 13022160
Alignment:
Q  7 acataattcccccct-ttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||||||||||    
T  13022108 acataattcctccctattgtaa-gtcttctgaggcctcttgaatcttcattctt 13022160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 14726928 - 14726985
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||| || ||||||||||||||||||| || |||||||||| ||||    
T  14726928 ccctctgtaaagtcttatgcggcctcttgaatcttcatttttgatctttccaaagtct 14726985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 21060687 - 21060642
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||||||||||||||||||||||| |||| ||||| ||||    
T  21060687 tcttctgaggcctcttgaatcttcattcttgatctctccaaagtct 21060642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 21080004 - 21079959
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||| |||||||||||||||||||||||||||| ||||| ||||    
T  21080004 tcttcttaggcctcttgaatcttcattcttaatctctccaaagtct 21079959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 67
Target Start/End: Original strand, 10822027 - 10822087
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttc 67  Q
    ||||||||||  ||||||||| ||||| |||||||| |||||||||||||| | |||||||    
T  10822027 acataattccttcctttgtaatgtcttttgaggccttttgaatcttcattcatgatctttc 10822087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 72
Target Start/End: Original strand, 19246079 - 19246131
Alignment:
Q  20 ctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    ||||||||||| ||| ||| |||||||||||||||||||| ||||| ||||||    
T  19246079 ctttgtaaagttttccgagacctcttgaatcttcattcttcatcttcccaagg 19246131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 22404545 - 22404509
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| ||||||||||||||||||||||||||    
T  22404545 tgtaaagtctcctgaggcctcttgaatcttcattctt 22404509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 21547070 - 21547028
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttc 53  Q
    |||||| |||||||||| ||||| |||||||||||||||||||    
T  21547070 aattcctccctttgtaatgtcttttgaggcctcttgaatcttc 21547028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 3357936 - 3358001
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc-ttaatctttccaaggtct 75  Q
    |||||| |||||||||| ||||| |||||||  |||||||||||||| || |||||| ||||||||    
T  3357936 aattcctccctttgtaatgtcttttgaggccctttgaatcttcattctttcatcttttcaaggtct 3358001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 21687436 - 21687371
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| |||| ||||| || |||| ||||| |||||||||||| ||||| ||||||    
T  21687436 acataattcctccctctgtagagtctcctaaggcatcttgtatcttcattcttcatcttcccaagg 21687371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 23230273 - 23230224
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    ||||| |||| |||| |||||||||| || ||||||||||||||||||||    
T  23230273 acatagttcctccctgtgtaaagtctccttaggcctcttgaatcttcatt 23230224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 30356076 - 30356121
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    ||||||||||| |||||||||||||||||| ||||| |||| ||||    
T  30356076 tcttctgaggcttcttgaatcttcattcttgatcttcccaaagtct 30356121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 9387421 - 9387457
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    ||||||| ||||||||||||||||||||||| |||||    
T  9387421 tttgtaatgtcttctgaggcctcttgaatctacattc 9387457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 21152777 - 21152745
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||| ||||||    
T  21152777 aagtcttctgaggcctcttgaatctttattctt 21152745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 27123133 - 27123081
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| || | |||||||||| | |||||||||||||| |||||||||    
T  27123133 acataattcctccatatgtaaagtctccagaggcctcttgaattttcattctt 27123081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 31879122 - 31879070
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||  ||||  ||||| |||||||||| |||||||||||||||||||    
T  31879122 acataattcttccctaagtaaactcttctgaggtctcttgaatcttcattctt 31879070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 19863167 - 19863308
Alignment:
Q  106 tgttgaacttgaacttgtctcatacttatggcttgtaccaatttggagagtgcttccatttgtttactcatcaaggtctgattagccaggataacactat 205  Q
    |||||||||| ||||||||| ||||||||||| ||||||  ||| || |||||||| ||||||||||||||||| | |||| |||||||||||| |||||    
T  19863167 tgttgaacttaaacttgtcttatacttatggcctgtacctgttttgaaagtgcttctatttgtttactcatcaatgcctgactagccaggataatactat 19863266  T
Q  206 tctcattcacttcaagcactcgtatctcacattggtcaatct 247  Q
    ||||||||||||||||||||| | |||||| ||| |||||||    
T  19863267 tctcattcacttcaagcactcctttctcactttgctcaatct 19863308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 19927132 - 19927067
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||||    
T  19927132 acataattcctccctttgtaaaatcttctgaggcctcttaaatcttcattcttcatcttcccaagg 19927067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 9850010 - 9849949
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||||| ||||| ||||||    
T  9850010 aattcctccctttgtaaagtcttctgagacctcttgaattttcattctttatcttcccaagg 9849949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 75
Target Start/End: Complemental strand, 16670024 - 16669960
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||| |||||||||| |||||||||||||| ||||||||| |||||| ||||| |||||||||    
T  16670024 aattcctccctttgtaacgtcttctgaggccttttgaatcttaattcttcatcttcccaaggtct 16669960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 25024907 - 25024954
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  25024907 ccctttgtaaagtcttttgaggcctcttgaatcttcattcttcatctt 25024954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 5685439 - 5685493
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| ||||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  5685439 ccctctgtaaagtcttctgaggtctcttgaatcttctttcttcatctttccaagg 5685493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 17277640 - 17277694
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| |||||||||||||||| ||||||||||||| ||||||||||| |||||    
T  17277640 aattcctccctttgtaaagtcttatgaggcctcttgagtcttcattctttatctt 17277694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 19094040 - 19094094
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  19094040 aattcctccctctgtaaagtcttatgaggcctcttgaatcttcattcttcatctt 19094094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 59
Target Start/End: Original strand, 16928728 - 16928765
Alignment:
Q  22 ttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16928728 ttgtaaagtcttctgaggcctcttgaatcttcattctt 16928765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Complemental strand, 26114494 - 26114449
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattcttaatcttt 66  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||||    
T  26114494 tttgtaaagtcttttgaggcctcttgaatcttcattcttcatcttt 26114449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 8968379 - 8968327
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||  ||||||||||||||||| |||||||||||||||||||    
T  8968379 acataattcctcccactgtaaagtcttctgaggtctcttgaatcttcattctt 8968327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Original strand, 10236391 - 10236446
Alignment:
Q  19 cctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtc 74  Q
    ||||||||||| |||||||||| ||||||||||||||| || ||||| ||||||||    
T  10236391 cctttgtaaagacttctgaggcatcttgaatcttcattattcatcttcccaaggtc 10236446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 77
Target Start/End: Complemental strand, 9263625 - 9263555
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtctat 77  Q
    |||||||| | |||| ||||||||||| ||| | ||||||||||||||||||| ||||| |||| ||||||    
T  9263625 acataatttctccctctgtaaagtcttatgatgactcttgaatcttcattcttgatcttcccaatgtctat 9263555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 23083502 - 23083556
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| ||||| |||||| |||||||||||||||||||||||| ||||| ||||||    
T  23083502 ccctctgtaacgtcttccgaggcctcttgaatcttcattcttcatcttcccaagg 23083556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 15047574 - 15047631
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    ||||| ||||||||||  |||||||||||||||||||||||| ||||| |||| ||||    
T  15047574 cccttggtaaagtctttcgaggcctcttgaatcttcattcttgatcttcccaaagtct 15047631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 15106850 - 15106793
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    ||||| ||||||||||  |||||||||||||||||||||||| ||||| |||| ||||    
T  15106850 cccttggtaaagtctttcgaggcctcttgaatcttcattcttgatcttcccaaagtct 15106793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 22345871 - 22345915
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcat 55  Q
    |||||| |||||||||| ||||| |||||||||||||||||||||    
T  22345871 aattcctccctttgtaatgtcttatgaggcctcttgaatcttcat 22345915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 1832344 - 1832294
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggt 73  Q
    ||||| ||||||||||||||||||||| ||| ||||| ||||| |||||||    
T  1832344 tgtaatgtcttctgaggcctcttgaatattctttcttgatcttcccaaggt 1832294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 19547358 - 19547308
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||||| | |||||||||| |||||| || |||||||||||||||||||    
T  19547358 acataatttctccctttgtaatgtcttccgacgcctcttgaatcttcattc 19547308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 72
Target Start/End: Original strand, 5691549 - 5691610
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| |||||| ||||||||||| |||||||| |  ||||||||||||| ||||| ||||||    
T  5691549 aatttccccctctgtaaagtcttttgaggcctatcaaatcttcattcttcatcttcccaagg 5691610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 11782285 - 11782318
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    |||||||||| |||||||||||||||||||||||    
T  11782285 tgtaaagtctcctgaggcctcttgaatcttcatt 11782318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 19883774 - 19883717
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||||| |||||| |||||| ||||||||| ||||| |||| ||||    
T  19883774 ccctctgtaaagtcttctaaggcctgttgaattttcattcttgatcttcccaaagtct 19883717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 22527746 - 22527787
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| || || |||||||||||||||||||||||||    
T  22527746 ccctttgtaacgtattttgaggcctcttgaatcttcattctt 22527787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 57
Target Start/End: Original strand, 10108039 - 10108087
Alignment:
Q  9 ataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||||| |||||||||| || ||||||||||||||| || |||||||    
T  10108039 ataattcctccctttgtaatgttttctgaggcctcttgcatattcattc 10108087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 14573256 - 14573296
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  14573256 taaagtcttctgaagcctcttaaatcttcattcttgatctt 14573296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 17711095 - 17711147
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||| ||||| ||||  || ||||||||||||||||||||||    
T  17711095 acataattcctccctatgtaatgtctcatggggcctcttgaatcttcattctt 17711147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 59
Target Start/End: Original strand, 25096114 - 25096142
Alignment:
Q  31 cttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||||||    
T  25096114 cttctgaggcctcttgaatcttcattctt 25096142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 37741409 - 37741441
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||| |||||||||||||||||||||||    
T  37741409 aagtcttctaaggcctcttgaatcttcattctt 37741441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 106 - 247
Target Start/End: Complemental strand, 64899 - 64758
Alignment:
Q  106 tgttgaacttgaacttgtctcatacttatggcttgtaccaatttggagagtgcttccatttgtttactcatcaaggtctgattagccaggataacactat 205  Q
    |||||||||||||||||||| ||||||||||||||||||  |||  | |||||||| ||||||||||||||||||| |||| |||| ||||||| |||||    
T  64899 tgttgaacttgaacttgtcttatacttatggcttgtacctgtttcaaaagtgcttctatttgtttactcatcaaggcctgactagcaaggataatactat 64800  T
Q  206 tctcattcacttcaagcactcgtatctcacattggtcaatct 247  Q
    |||||||||||  |||||||| ||| |||| ||| |||||||    
T  64799 tctcattcactctaagcactcctatatcaccttgctcaatct 64758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 106 - 247
Target Start/End: Original strand, 21021579 - 21021720
Alignment:
Q  106 tgttgaacttgaacttgtctcatacttatggcttgtaccaatttggagagtgcttccatttgtttactcatcaaggtctgattagccaggataacactat 205  Q
    |||||||||||||||||||| ||||||||| ||||||    |||||| |||||||| || |||||||||||||||| |||| ||| || ||||| |||||    
T  21021579 tgttgaacttgaacttgtctgatacttatgacttgtattggtttggaaagtgcttctatatgtttactcatcaaggcctgactagtcatgataatactat 21021678  T
Q  206 tctcattcacttcaagcactcgtatctcacattggtcaatct 247  Q
    ||||||||||| ||||||||| |||||||| ||| |||||||    
T  21021679 tctcattcactccaagcactcctatctcactttgctcaatct 21021720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 24282791 - 24282856
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||||||| ||||| ||||||    
T  24282791 acataattcctccctttgtaaagtcttatgaggcctcttgaatattcattcttcatcttcccaagg 24282856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 16114601 - 16114655
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||    
T  16114601 ccctttgtaaagtcttctaaggcctcttgaatcttcattcttcatcttcccaagg 16114655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 7881583 - 7881642
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcc-tcttgaatcttcattcttaatctt 65  Q
    |||||||||| |||||||||||||||| ||||||| |||||||||||||||||| |||||    
T  7881583 acataattcctccctttgtaaagtcttatgaggccttcttgaatcttcattctttatctt 7881642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 12011475 - 12011423
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    ||||||||||| |||||||| |||||||||||||||| ||||| |||||||||    
T  12011475 tgtaaagtcttttgaggcctattgaatcttcattcttgatcttcccaaggtct 12011423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 7 - 57
Target Start/End: Complemental strand, 20033425 - 20033375
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||||| | ||||||| || |||||||||||||||||||||||||||||    
T  20033425 acataatttctccctttgaaatgtcttctgaggcctcttgaatcttcattc 20033375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 9783283 - 9783222
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||| ||||||||||| |||||||||||||| ||||||| || ||||| ||||||    
T  9783283 aattcctccctctgtaaagtcttatgaggcctcttgaaccttcatttttcatcttcccaagg 9783222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 35133674 - 35133739
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||  |||||||||| ||||||||||||||||||||| |||| ||||  ||||| |||||    
T  35133674 acataattctaccctttgtaacgtcttctgaggcctcttgaatattcaatcttcttcttttcaagg 35133739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 15542616 - 15542564
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||| |||| ||||||||||  |||||||||||||||||||||||||    
T  15542616 acataagtcctccctatgtaaagtctcttgaggcctcttgaatcttcattctt 15542564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 16113325 - 16113373
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  16113325 aattcctccctttgtaaattcttctgaggcctattgaatattcattctt 16113373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 21663394 - 21663346
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| |||| ||||||||||  |||||||||||||||||||||||||    
T  21663394 aattcctccctatgtaaagtctcgtgaggcctcttgaatcttcattctt 21663346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 21848426 - 21848470
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcat 55  Q
    |||||| |||||||||||||||| |||||| ||||||||||||||    
T  21848426 aattccaccctttgtaaagtcttttgaggcatcttgaatcttcat 21848470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 75
Target Start/End: Original strand, 26022188 - 26022252
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||| ||||||||||||||||||||||||| |||||| ||  |||||  ||||||||| ||||    
T  26022188 aattcctccctttgtaaagtcttctgaggccttttgaattttatttcttggtctttccaaagtct 26022252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 57
Target Start/End: Original strand, 27911868 - 27911904
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    ||||||| |||||||||||||||||||||||||||||    
T  27911868 tttgtaatgtcttctgaggcctcttgaatcttcattc 27911904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 16363423 - 16363470
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||| ||||||||||||| |||||| | ||||||||||||||||||||    
T  16363423 ccctctgtaaagtcttctaaggcctatagaatcttcattcttaatctt 16363470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 70
Target Start/End: Complemental strand, 25959760 - 25959702
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||| |||||| ||||||||| | ||||||||||||||||||||||| ||||| ||||    
T  25959760 aattcctccctttataaagtctttt-aggcctcttgaatcttcattcttcatcttcccaa 25959702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 44796907 - 44796950
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatc 50  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||    
T  44796907 acataattcctccctctgtaacgtcttctgaggcctcttgaatc 44796950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 15811752 - 15811687
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| ||||| ||||| ||||||||||| |||||||| ||||  |||| ||||||    
T  15811752 acataattccaccctctgtaacgtcttatgaggcctcttaaatcttcaatcttcgtcttcccaagg 15811687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 16786401 - 16786336
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||| | |||| ||||||||||| ||||| || |||||||||||||||| || || ||||||    
T  16786401 acataatttctccctctgtaaagtcttatgaggtcttttgaatcttcattcttgatattcccaagg 16786336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 18734870 - 18734837
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctta 60  Q
    ||||||||||||||||||| ||||||||||||||    
T  18734870 aagtcttctgaggcctcttaaatcttcattctta 18734837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 25402740 - 25402695
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatctt 52  Q
    |||||||||| ||| || | ||||||||||||||||||||||||||    
T  25402740 acataattcctcccatttttaagtcttctgaggcctcttgaatctt 25402695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 26101660 - 26101717
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| |||||| |||| |||| |||||||||||||||||||| || || |||||||||    
T  26101660 ccctctgtaaattcttatgagacctcttgaatcttcattcttgatattcccaaggtct 26101717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 9403129 - 9403181
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||  |||||||||| ||||| ||||||||||||| ||||||    
T  9403129 acataattcctcccactgtaaagtctcctgagacctcttgaatcttaattctt 9403181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 14782319 - 14782371
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||| || |||| | |||||||| ||||||||| ||||||||||||||||    
T  14782319 acataatgcctccctatttaaagtctcctgaggccttttgaatcttcattctt 14782371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 15571992 - 15571944
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| |||| |||||| |||| ||| |||||||||||||||||||||    
T  15571992 aattcctccctgtgtaaactcttttgatgcctcttgaatcttcattctt 15571944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 18100072 - 18100024
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatcttt 66  Q
    ||||||||||||||| |  ||| ||||||||||||||||||| ||||||    
T  18100072 ccctttgtaaagtctacatagggctcttgaatcttcattcttcatcttt 18100024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 58
Target Start/End: Original strand, 18827194 - 18827245
Alignment:
Q  7 acataattcccccc-tttgtaaagtcttctgaggcctcttgaatcttcattct 58  Q
    |||||||||| ||| ||||||| ||||| ||||||||||||||||||||||||    
T  18827194 acataattcctcccatttgtaa-gtcttatgaggcctcttgaatcttcattct 18827245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 73
Target Start/End: Complemental strand, 24380660 - 24380594
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggt 73  Q
    ||||||||||   |||||| ||||||||||||||||||||||||||||||||| ||||| |||||||    
T  24380660 acataattccttgctttgtgaagtcttctgaggcctcttgaatcttcattcttcatcttaccaaggt 24380594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 7984905 - 7984974
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatc-tttccaaggtct 75  Q
    |||||||||| ||| |||||||||||| ||| ||||||||||||||||||||| ||| ||||||||||||    
T  7984905 acataattcctcccattgtaaagtcttatgatgcctcttgaatcttcattcttcatcttttccaaggtct 7984974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 30117954 - 30117900
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    ||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  30117954 ccctttgcaaagtcttttgaggcctcttgaatcttcattcttcatcttcccaagg 30117900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 15176735 - 15176687
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  15176735 aattcctccctatgtaaagtctcctgaggcctcttgaatcttcattctt 15176687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 19785070 - 19785024
Alignment:
Q  24 gtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  19785070 gtaaagtcttatgaggcctcttgaatcttcattcttcatcttcccaa 19785024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Complemental strand, 24381621 - 24381575
Alignment:
Q  19 cctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  24381621 cctttgtaatgtcttctgaggactcttgaatcttcattcttcatctt 24381575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 70
Target Start/End: Complemental strand, 37527314 - 37527268
Alignment:
Q  24 gtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||||||| ||||||||||||||||||||||| ||||| ||||    
T  37527314 gtaaagtcttcttaggcctcttgaatcttcattcttcatcttcccaa 37527268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 14271631 - 14271696
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| ||||| |||||||||||||| ||||||||||| ||||  |||| ||||||    
T  14271631 acataattcctccctatgtaacgtcttctgaggcctattgaatcttcaatctttgtcttgccaagg 14271696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 18007344 - 18007401
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| |||||||||||| ||||||||||||||||||||| || |||||  ||||||||    
T  18007344 ccctctgtaaagtcttcagaggcctcttgaatcttcatttttgatcttctcaaggtct 18007401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 73
Target Start/End: Complemental strand, 15058796 - 15058744
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggt 73  Q
    ||||||| |||||||||| |||||||||||||||||||| || || |||||||    
T  15058796 tttgtaacgtcttctgagacctcttgaatcttcattcttcattttcccaaggt 15058744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 24091163 - 24091131
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||||||||||    
T  24091163 aagtcttctgaggcctcttgaatcttcattctt 24091131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 28858626 - 28858694
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||| | ||||| ||||| |||| ||||||||||||||| ||||||||| ||||| |||| ||||    
T  28858626 acataatttctcccttcgtaaaatcttttgaggcctcttgaatattcattcttgatcttcccaaagtct 28858694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 54
Target Start/End: Original strand, 22501628 - 22501671
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttca 54  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||    
T  22501628 aattcctccctctgtaatgtcttctgaggcctcttgaatcttca 22501671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 65
Target Start/End: Original strand, 19791184 - 19791242
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||||| ||| ||| ||| |||| |||||||| |||||||||||||||| |||||    
T  19791184 acataattcctcccgttgcaaaatcttttgaggcctattgaatcttcattcttcatctt 19791242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24091611 - 24091657
Alignment:
Q  13 ttcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||| |||||||||||||| ||| |||||||||||||||| ||||||    
T  24091611 ttcctccctttgtaaagtcatctaaggcctcttgaatctttattctt 24091657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Original strand, 30487659 - 30487701
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| ||||||||||||||||||||||||| ||||| ||||||    
T  30487659 tcttttgaggcctcttgaatcttcattcttcatcttcccaagg 30487701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Original strand, 30832732 - 30832786
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| ||||||||||||||| | |||| ||||| ||||||||||||| |||||    
T  30832732 aattcctccctttgtaaagtctcccgaggtctcttaaatcttcattcttgatctt 30832786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 74
Target Start/End: Original strand, 2638523 - 2638576
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtc 74  Q
    |||||||| |||| |||||||||||||||||||| |||| || || ||||||||    
T  2638523 tttgtaaattcttttgaggcctcttgaatcttcactcttcatattcccaaggtc 2638576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 72
Target Start/End: Complemental strand, 4007443 - 4007394
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    ||||||||||| ||||||| ||||||||||||||||| ||| || |||||    
T  4007443 tgtaaagtcttttgaggccccttgaatcttcattcttcatcctttcaagg 4007394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 54
Target Start/End: Complemental strand, 13833896 - 13833863
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttca 54  Q
    ||||||||||||| ||||||||||||||||||||    
T  13833896 tttgtaaagtcttatgaggcctcttgaatcttca 13833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 23868138 - 23868085
Alignment:
Q  7 acataattcccccctt-tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| ||||  |||||||||| ||||| ||||||||||||||||||||    
T  23868138 acataattcctccctactgtaaagtctcctgagccctcttgaatcttcattctt 23868085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 70
Target Start/End: Complemental strand, 24851227 - 24851178
Alignment:
Q  21 tttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    ||||||| ||||||||||| ||||||||||||||||| | ||||| ||||    
T  24851227 tttgtaatgtcttctgaggtctcttgaatcttcattcatgatcttcccaa 24851178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 14076916 - 14076964
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||||||||  | |||| |||||||||||||||||||||||    
T  14076916 aattcctccctttgtaatattttctaaggcctcttgaatcttcattctt 14076964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 24389566 - 24389598
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||||||||||||||||||||||||    
T  24389566 aagtctcctgaggcctcttgaatcttcattctt 24389598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 24518878 - 24518842
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  24518878 tgtaatgtcttctgaggcctcttaaatcttcattctt 24518842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 34499079 - 34499147
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| |||| ||||| || | |||||||||||||||| | ||||||| ||||| |||| ||||    
T  34499079 acataattcctccctctgtaatgtttcctgaggcctcttgaatttccattcttgatcttcccaaagtct 34499147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 17469865 - 17469807
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||| || |||||    
T  17469865 acataattcctccctttgtaaagtcttatgaggcctcttgaatcttcatttttcatctt 17469807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 18 - 71
Target Start/End: Original strand, 26315022 - 26315075
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||| |||||    
T  26315022 ccctttgtaaagtcttatgaggcctcttgaatcttcattcttcatcttcccaag 26315075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 25572769 - 25572701
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| |||||||||| |||||| ||| |||||||||||||| ||||| ||||| |||||||||    
T  25572769 acataattcctccctttgtaatgtcttccgagacctcttgaatcttccttcttcatcttcccaaggtct 25572701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24265582 - 24265528
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  24265582 aattcctccctttgtaaagtcttctgaggccttttgattcttcattcttcatctt 24265528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 24342213 - 24342159
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| ||||||||||||||||||||||||| |||| ||||||||||| |||||    
T  24342213 aattcctccctttgtaaagtcttctgaggccttttgattcttcattcttcatctt 24342159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 19761887 - 19761822
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| ||||| ||||||||||||||||||||| ||| ||||| ||||| ||||||    
T  19761887 acataattcctccctctgtaacgtcttctgaggcctcttgaatattctttcttcatcttcccaagg 19761822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 25920622 - 25920690
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||| | |||| ||||||||||| ||||| ||||||||||||||||||| ||| | |||||||||    
T  25920622 acataatttctccctctgtaaagtcttatgaggtctcttgaatcttcattcttgatcatcccaaggtct 25920690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 18939321 - 18939375
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    ||||||||||||||||||| |||||||||||| |||| ||||  |||||||||||    
T  18939321 ccctttgtaaagtcttctggggcctcttgaatattcaatctttgtctttccaagg 18939375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 18832012 - 18832077
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| ||||  |||| |||||||||||||||||||||||||| ||||  |||| ||||||    
T  18832012 acataattcctccctccgtaacgtcttctgaggcctcttgaatcttcaatcttcgtcttcccaagg 18832077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 24261873 - 24261910
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcat 55  Q
    |||||||||||||||| |||||||||||||||||||||    
T  24261873 ccctttgtaaagtcttatgaggcctcttgaatcttcat 24261910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 107965 - 107897
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| || ||||||| || |||||| ||||||||||||||||||| | ||||| |||| ||||    
T  107965 acataattcctccatttgtaatgttttctgatgcctcttgaatcttcattcatgatcttcccaaagtct 107897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 23338734 - 23338782
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||| ||||||||||| |||||| |||||||||||||||||||    
T  23338734 aattcctcccattgtaaagtctcctgaggactcttgaatcttcattctt 23338782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 24658607 - 24658555
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||  ||| ||||||||||  |||||||||||||||||||||||||    
T  24658607 acataattccttcctatgtaaagtctcttgaggcctcttgaatcttcattctt 24658555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 18227402 - 18227465
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||| | |||| ||||| | ||| ||||| ||||||||||||||||||||||||| ||||    
T  18227402 acataatttctccctctgtaatgccttatgaggtctcttgaatcttcattcttaatcttcccaa 18227465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 20860147 - 20860181
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||| ||||||||||||||||||||||||||    
T  20860147 taaagtctcctgaggcctcttgaatcttcattctt 20860181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Original strand, 24188694 - 24188736
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||    
T  24188694 tgtaacgtcttctgaagcctcttgaatcttcattcttcatctt 24188736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 24264035 - 24263993
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||    
T  24264035 tcttctgaggcctcttaaatcttcattcttcatcttcccaagg 24263993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 72
Target Start/End: Complemental strand, 24340665 - 24340623
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||    
T  24340665 tcttctgaggcctcttaaatcttcattcttcatcttcccaagg 24340623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 28254691 - 28254741
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||||||| || ||||||| ||||| |||||||| ||||||||||||||    
T  28254691 acataattcctccatttgtaatgtcttatgaggccttttgaatcttcattc 28254741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 19052911 - 19052943
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||||||||||||||||||||||||    
T  19052911 aagtctcctgaggcctcttgaatcttcattctt 19052943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 66
Target Start/End: Complemental strand, 24162314 - 24162259
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcct-cttgaatcttcattcttaatcttt 66  Q
    |||||| |||||| |||||| ||||||||||| ||||||||||||||||| ||||||    
T  24162314 aattcctcccttt-taaagttttctgaggccttcttgaatcttcattcttcatcttt 24162259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 26122198 - 26122250
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||  ||||  |||||||||||||  ||||||||||||||||||||    
T  26122198 acataattccttccttcataaagtcttctgacacctcttgaatcttcattctt 26122250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 26253260 - 26253312
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||| ||||| |||| |||||  |||||||||| |||||||||||||||||||    
T  26253260 acatcattcctccctctgtaatatcttctgagggctcttgaatcttcattctt 26253312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 13906890 - 13906825
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| ||||| |||||||||| ||||||||||||||||| ||||||| ||||| ||||||    
T  13906890 acataattcctcccttagtaaagtcttatgaggcctcttgaatctccattctttatcttcccaagg 13906825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 18735573 - 18735512
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||| ||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  18735573 aattcctccctctgtaaagtcttctgagggctcttgaatcttcattcttcttctttccaagg 18735512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 22470708 - 22470648
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||| |||||||| |||||||||||||||| |||||||||||||||| ||||| |||||    
T  22470708 aattcctccctttgtgaagtcttctgaggcctattgaatcttcattcttcatcttcccaag 22470648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 23 - 74
Target Start/End: Complemental strand, 20891934 - 20891883
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtc 74  Q
    ||||||||||||||||||||||||||||||||||||| |||||  |||||||    
T  20891934 tgtaaagtcttctgaggcctcttgaatcttcattcttcatcttcacaaggtc 20891883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 65
Target Start/End: Complemental strand, 23054883 - 23054825
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||||| ||||||||||  |||| ||||||||||||||||||||||||| |||||    
T  23054883 acataattcctccctttgtaatttcttttgaggcctcttgaatcttcattcttgatctt 23054825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 820148 - 820087
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||| ||||| ||||| |||||||||||||||||| |||||| ||||||||||||    
T  820148 aattcctccctctgtaacgtcttttgaggcctcttgaatcttaattcttcatctttccaagg 820087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 65
Target Start/End: Complemental strand, 3429525 - 3429472
Alignment:
Q  12 attcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||    
T  3429525 attcctccctttgtaaagtcttttgaggtctcttgaatcttcattcttcatctt 3429472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 11636265 - 11636229
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||||||||||||||    
T  11636265 tgtaaagtcttctgaggcctcttgaatcttcattctt 11636229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 23 - 71
Target Start/End: Complemental strand, 19388141 - 19388093
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||||||||||||||||| ||||| |||||||||||||||| |||||    
T  19388141 tgtaaagtcttctgaggcctattgaagcttcattcttaatcttcccaag 19388093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 3115016 - 3114971
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatctt 52  Q
    |||||||||| |||| ||||| ||||||||||||||||||||||||    
T  3115016 acataattcctccctctgtaacgtcttctgaggcctcttgaatctt 3114971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 70
Target Start/End: Original strand, 17134899 - 17134944
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    ||||||||| ||||||||||||||||||||||||| ||||| ||||    
T  17134899 taaagtcttatgaggcctcttgaatcttcattcttcatcttcccaa 17134944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 20886670 - 20886727
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| ||||| |||||||||||| |||||||||||| |||||  ||||||||    
T  20886670 ccctttgtaatgtcttatgaggcctcttggatcttcattcttcatcttctcaaggtct 20886727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 6075765 - 6075825
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||| |||||| ||| | || |||||||||||||||||||||||||| ||||| |||||    
T  6075765 aattcctccctttataatgcctcctgaggcctcttgaatcttcattcttcatcttcccaag 6075825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 8145037 - 8145105
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||| |||| |||||||||| |||| |||||||||||||| | | || |||||||||| ||||    
T  8145037 acataattcctccctatgtaaagtctactgaagcctcttgaatctttagttttgatctttccaaagtct 8145105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 71
Target Start/End: Original strand, 22246791 - 22246851
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||| || ||||||||||||| ||||| ||||| ||||||||||||| ||||| |||||    
T  22246791 aattcctccttttgtaaagtcttttgaggtctcttaaatcttcattcttcatcttcccaag 22246851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 59
Target Start/End: Complemental strand, 25851255 - 25851204
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| ||| || ||||||||||||||||||||||||| |||||||||    
T  25851255 acataattcctcccatt-taaagtcttctgaggcctcttgaattttcattctt 25851204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 59
Target Start/End: Original strand, 19912379 - 19912420
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||| |||||||||||| |||||||||||||||||| |||||    
T  19912379 ccctatgtaaagtcttcagaggcctcttgaatcttcgttctt 19912420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 6292149 - 6292201
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||| | ||| || || |||||||||||||||||||||||||    
T  6292149 acataattcctccctctataacgtattttgaggcctcttgaatcttcattctt 6292201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 55
Target Start/End: Complemental strand, 8881664 - 8881636
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcat 55  Q
    |||||||||||||||||||||||||||||    
T  8881664 aagtcttctgaggcctcttgaatcttcat 8881636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 70
Target Start/End: Complemental strand, 19170449 - 19170385
Alignment:
Q  7 acataattcccccctt-tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||||| ||||  |||||||||| |||||| ||||||||||| |||||||  |||||||||    
T  19170449 acataattcctccctactgtaaagtctcctgaggactcttgaatctccattcttggtctttccaa 19170385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 25531035 - 25530971
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||||||| | |||||||| |||||   ||||||||||||||||||||| | ||||| |||||    
T  25531035 acataattcctctctttgtaatgtcttacaaggcctcttgaatcttcattcatgatcttcccaag 25530971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 27853206 - 27853170
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||| || ||||||||||||||||||||||||||||    
T  27853206 tgtaacgtattctgaggcctcttgaatcttcattctt 27853170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 31284603 - 31284535
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||| | |||| | ||||||||| |||  |||||||||||||||||||| || || |||||||||    
T  31284603 acataatttctccctctttaaagtcttttgaaacctcttgaatcttcattcttgatattcccaaggtct 31284535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 59
Target Start/End: Complemental strand, 34276731 - 34276695
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| |||||||||||||| |||||||||||    
T  34276731 tgtaaagtctcctgaggcctcttgactcttcattctt 34276695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 11464618 - 11464557
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||| ||||||    
T  11464618 aattcctccctttgttaagtcttttgaggcctcttgaatcttcattcttcatcttcccaagg 11464557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 72
Target Start/End: Original strand, 17891520 - 17891585
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| || |||||||| |||| ||||||||||||||||||||||||| ||||| ||||||    
T  17891520 acataattcctccttttgtaaattcttatgaggcctcttgaatcttcattcttcatcttcccaagg 17891585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 34580066 - 34580013
Alignment:
Q  22 ttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |||||||||    
T  34580066 ttgtaaagtcttatgatgcatcttgaatcttcattcttaatcttcccaaggtct 34580013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 75
Target Start/End: Complemental strand, 34585815 - 34585762
Alignment:
Q  22 ttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||||||| ||| || |||||||||||||||||||||||| |||||||||    
T  34585815 ttgtaaagtcttatgatgcatcttgaatcttcattcttaatcttcccaaggtct 34585762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 7 - 59
Target Start/End: Original strand, 18758090 - 18758142
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||  || ||||||||||| ||||||||||||||||||||||||||    
T  18758090 acataattcctgccattgtaaagtctcctgaggcctcttgaatcttcattctt 18758142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 20175613 - 20175670
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||| |||||||||||||||| |||||||| ||||| | |||||||    
T  20175613 ccctatgtaaagtcttatgaggcctcttgaatcatcattcttgatcttcctaaggtct 20175670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 26651942 - 26651877
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||||| |||| |||||  ||||||||||||||| |||| ||||||||| ||||| ||||||    
T  26651942 acataattcctccctctgtaacatcttctgaggcctctagaatattcattctttatcttcccaagg 26651877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 71
Target Start/End: Original strand, 27420877 - 27420926
Alignment:
Q  22 ttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||| |||||    
T  27420877 ttgtaatgtcttctgaggccacttgaatcttcattcttcatcttcccaag 27420926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 32086817 - 32086866
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    |||||||||| ||||||||||||||| || | ||||||||||||||||||    
T  32086817 acataattcctccctttgtaaagtctcctaaagcctcttgaatcttcatt 32086866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 18120835 - 18120803
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||||||||||    
T  18120835 aagtcttctgaggcctcttgaatcttcattctt 18120803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 21905531 - 21905567
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||| ||||||||||||||||||||||||||    
T  21905531 tgtaaagtctcctgaggcctcttgaatcttcattctt 21905567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 75
Target Start/End: Complemental strand, 22378120 - 22378068
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    ||||| |||| ||||||||||||||||||||||||||  |||| |||||||||    
T  22378120 tgtaaggtctcctgaggcctcttgaatcttcattctttgtcttcccaaggtct 22378068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 55
Target Start/End: Complemental strand, 27907826 - 27907782
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcat 55  Q
    |||||| |||| |||||||||| ||||||||||||||||||||||    
T  27907826 aattcctccctatgtaaagtctcctgaggcctcttgaatcttcat 27907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 28930079 - 28930115
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||||||||||||||||||| |||||||||    
T  28930079 tgtaaagtcttctgaggcctcttgaatattcattctt 28930115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 70
Target Start/End: Original strand, 28766653 - 28766716
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||| | ||| ||||||||||||||||| | ||||||||||||||| || ||||| ||||    
T  28766653 acataatttctcccattgtaaagtcttctgagacatcttgaatcttcattgttcatcttcccaa 28766716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 18553098 - 18553152
Alignment:
Q  18 ccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||| ||||||||||||||| || |||||||||||||||||| ||| | ||||||    
T  18553098 ccctctgtaaagtcttctgaagcttcttgaatcttcattcttcatcatcccaagg 18553152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 32438983 - 32438937
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    |||||| |||||||||| || || |||||||||||||||||||||||    
T  32438983 aattcctccctttgtaatgttttttgaggcctcttgaatcttcattc 32438937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Complemental strand, 8501794 - 8501749
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| |||| |||||||||||||||||||| ||||| |||||||||    
T  8501794 tcttatgagacctcttgaatcttcattcttgatcttcccaaggtct 8501749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Original strand, 25938339 - 25938388
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    |||||||||| |||||||||| ||||||||| | || |||||||||||||    
T  25938339 acataattcctccctttgtaatgtcttctgaagtctattgaatcttcatt 25938388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 75
Target Start/End: Original strand, 34369140 - 34369185
Alignment:
Q  30 tcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||| ||||||||||||||||||||||| | |||||||||| ||||    
T  34369140 tcttatgaggcctcttgaatcttcattcatgatctttccaaagtct 34369185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 56
Target Start/End: Complemental strand, 36191374 - 36191325
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcatt 56  Q
    |||||||||| ||| |||||||||||| ||| |||| |||||||||||||    
T  36191374 acataattcctccccttgtaaagtcttatgaagcctattgaatcttcatt 36191325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 25922416 - 25922448
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||| ||||||||||||||||    
T  25922416 aagtcttctgaggcctattgaatcttcattctt 25922448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 29032675 - 29032723
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| ||||||||||||| | ||  ||||||||||||||||||||||    
T  29032675 aattcctccctttgtaaagtgtcctttggcctcttgaatcttcattctt 29032723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 29834660 - 29834708
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||| || |||||| |||||| |||||||| ||||||||||||||||    
T  29834660 aattcctccatttgtagagtcttttgaggcctgttgaatcttcattctt 29834708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0451 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0451
Description:

Target: scaffold0451; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 65
Target Start/End: Complemental strand, 10397 - 10341
Alignment:
Q  9 ataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||    
T  10397 ataattcctccctttgtgaagtcttttgaggcctcttgaatcttcattcttcatctt 10341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 11 - 74
Target Start/End: Original strand, 41132 - 41195
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtc 74  Q
    |||||| || ||||||||||||| ||||||||||||||||| ||||||| ||||| ||||||||    
T  41132 aattcctccttttgtaaagtcttatgaggcctcttgaatctccattcttcatcttcccaaggtc 41195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 41838 - 41778
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaag 71  Q
    |||||| ||||||||||| |||| | ||||||||||||||||||||||| ||||| |||||    
T  41838 aattcctccctttgtaaattcttattaggcctcttgaatcttcattctttatcttcccaag 41778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 72
Target Start/End: Complemental strand, 5138 - 5077
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||| |||| ||||||||||||||||||||||||||| ||  ||||| ||||| ||||||    
T  5138 aattcctccctctgtaaagtcttctgaggcctcttgaattttgcttcttcatcttcccaagg 5077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 65
Target Start/End: Complemental strand, 13778 - 13724
Alignment:
Q  11 aattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    |||||| || ||||||||||||||||| ||||||||||| ||| ||||| |||||    
T  13778 aattcctccatttgtaaagtcttctgatgcctcttgaattttccttcttcatctt 13724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 235
Target Start/End: Original strand, 1736 - 1801
Alignment:
Q  170 tactcatcaaggtctgattagccaggataacactattctcattcacttcaagcactcgtatctcac 235  Q
    ||||||||||||  ||| ||||||| |||| ||||||||||||||||  |||||||| ||||||||    
T  1736 tactcatcaaggcttgactagccagcataaaactattctcattcactctaagcactcctatctcac 1801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 72
Target Start/End: Complemental strand, 88743 - 88678
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaagg 72  Q
    |||||||| | |||| ||||||||||||||||| || ||||||||||||||||  | |||||||||    
T  88743 acataatttctccctctgtaaagtcttctgagggcttttgaatcttcattcttcttatttccaagg 88678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Original strand, 95413 - 95461
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcat 55  Q
    |||||||||| |||| |||||||||| ||||| ||||||||||||||||    
T  95413 acataattcctccctatgtaaagtctcctgagacctcttgaatcttcat 95461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 70
Target Start/End: Original strand, 21282 - 21329
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaa 70  Q
    |||||||||| ||||||||||||| ||||||||||||  |||||||||    
T  21282 tgtaaagtctcctgaggcctcttgtatcttcattcttggtctttccaa 21329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1017 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1017
Description:

Target: scaffold1017; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 57
Target Start/End: Original strand, 405 - 439
Alignment:
Q  23 tgtaaagtcttctgaggcctcttgaatcttcattc 57  Q
    ||||| |||||||||||||||||||||||||||||    
T  405 tgtaacgtcttctgaggcctcttgaatcttcattc 439  T

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Target: scaffold0555 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Original strand, 6265 - 6297
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    |||||||||||||||||||||||||| ||||||    
T  6265 aagtcttctgaggcctcttgaatctttattctt 6297  T

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Target: scaffold0086 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 75
Target Start/End: Complemental strand, 13100 - 13032
Alignment:
Q  7 acataattcccccctttgtaaagtcttctgaggcctcttgaatcttcattcttaatctttccaaggtct 75  Q
    |||||||| | ||||||||||   |||| |||||||||||||||||||||| | ||||| |||| ||||    
T  13100 acataatttctccctttgtaattccttccgaggcctcttgaatcttcattcatgatcttcccaaagtct 13032  T

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Target: scaffold0032 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 59
Target Start/End: Complemental strand, 93115 - 93083
Alignment:
Q  27 aagtcttctgaggcctcttgaatcttcattctt 59  Q
    ||||||||||||| |||||||||||||||||||    
T  93115 aagtcttctgaggactcttgaatcttcattctt 93083  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 244120 - 244080
Alignment:
Q  25 taaagtcttctgaggcctcttgaatcttcattcttaatctt 65  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  244120 taaagtcttctgaagcctcttaaatcttcattcttgatctt 244080  T

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