View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4859_low_5 (Length: 352)

Name: NF4859_low_5
Description: NF4859
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4859_low_5
NF4859_low_5
[»] chr6 (42 HSPs)
chr6 (110-223)||(2076242-2076355)
chr6 (112-194)||(22075402-22075484)
chr6 (112-223)||(23393597-23393708)
chr6 (112-223)||(23413505-23413616)
chr6 (110-189)||(27222822-27222901)
chr6 (111-194)||(31479473-31479556)
chr6 (112-194)||(19869172-19869254)
chr6 (110-183)||(12941217-12941290)
chr6 (110-194)||(23400662-23400747)
chr6 (113-194)||(27416540-27416621)
chr6 (112-194)||(8242397-8242479)
chr6 (112-194)||(11565386-11565468)
chr6 (112-194)||(11716952-11717034)
chr6 (112-194)||(12620345-12620427)
chr6 (112-190)||(23988292-23988370)
chr6 (112-194)||(27555525-27555606)
chr6 (110-198)||(25737873-25737961)
chr6 (110-189)||(4475785-4475864)
chr6 (116-194)||(14470866-14470944)
chr6 (112-194)||(22861740-22861822)
chr6 (112-194)||(22947652-22947734)
chr6 (112-194)||(22951608-22951690)
chr6 (112-194)||(23870096-23870178)
chr6 (112-194)||(23874052-23874134)
chr6 (110-188)||(28290904-28290982)
chr6 (111-194)||(16622822-16622903)
chr6 (114-194)||(23537966-23538046)
chr6 (117-189)||(23955359-23955431)
chr6 (112-194)||(16758700-16758782)
chr6 (110-179)||(18918590-18918659)
chr6 (110-194)||(34297782-34297866)
chr6 (115-194)||(1254144-1254223)
chr6 (113-179)||(18953496-18953562)
chr6 (159-223)||(27416670-27416733)
chr6 (153-223)||(23537775-23537845)
chr6 (153-223)||(27555413-27555482)
chr6 (153-194)||(23537882-23537923)
chr6 (110-158)||(28707880-28707928)
chr6 (153-223)||(22075527-22075596)
chr6 (153-223)||(23955242-23955311)
chr6 (187-223)||(18918656-18918692)
chr6 (187-223)||(18953559-18953595)
[»] chr1 (21 HSPs)
chr1 (111-223)||(41801289-41801401)
chr1 (110-194)||(22132108-22132192)
chr1 (110-189)||(16370915-16370994)
chr1 (111-194)||(41389675-41389758)
chr1 (112-190)||(33796022-33796100)
chr1 (112-194)||(1009247-1009329)
chr1 (112-194)||(1926807-1926889)
chr1 (112-194)||(16376827-16376909)
chr1 (112-194)||(20925821-20925903)
chr1 (110-194)||(20230148-20230233)
chr1 (111-194)||(39245181-39245262)
chr1 (111-194)||(39248736-39248817)
chr1 (110-189)||(32649057-32649136)
chr1 (110-223)||(21406220-21406322)
chr1 (115-190)||(29533876-29533951)
chr1 (112-194)||(52634253-52634335)
chr1 (159-223)||(22132241-22132305)
chr1 (110-176)||(11809959-11810025)
chr1 (153-223)||(29533760-29533829)
chr1 (136-189)||(20439188-20439241)
chr1 (153-223)||(16370798-16370867)
[»] scaffold0575 (1 HSPs)
scaffold0575 (110-223)||(6970-7083)
[»] scaffold0013 (1 HSPs)
scaffold0013 (110-223)||(74341-74454)
[»] chr8 (32 HSPs)
chr8 (110-223)||(23913221-23913334)
chr8 (110-194)||(44385843-44385927)
chr8 (112-223)||(14399104-14399215)
chr8 (110-190)||(23427815-23427895)
chr8 (112-223)||(18864116-18864227)
chr8 (11-92)||(11355771-11355852)
chr8 (112-223)||(30941576-30941687)
chr8 (112-194)||(21829472-21829554)
chr8 (112-194)||(21974195-21974277)
chr8 (112-194)||(43250187-43250269)
chr8 (110-198)||(21328547-21328635)
chr8 (112-194)||(21409885-21409968)
chr8 (112-194)||(21804377-21804460)
chr8 (112-194)||(21978305-21978387)
chr8 (112-194)||(22110586-22110668)
chr8 (117-189)||(11774286-11774358)
chr8 (110-189)||(8414986-8415065)
chr8 (115-190)||(27942700-27942775)
chr8 (110-179)||(21386159-21386228)
chr8 (153-223)||(23427698-23427768)
chr8 (120-189)||(363258-363327)
chr8 (110-179)||(21968002-21968071)
chr8 (110-179)||(21980842-21980911)
chr8 (110-179)||(21985825-21985894)
chr8 (110-179)||(22000788-22000857)
chr8 (110-179)||(22009206-22009275)
chr8 (110-194)||(42560891-42560975)
chr8 (161-223)||(44385972-44386034)
chr8 (136-189)||(8729645-8729698)
chr8 (153-223)||(11774169-11774238)
chr8 (110-157)||(44494233-44494280)
chr8 (153-206)||(8415113-8415166)
[»] chr7 (63 HSPs)
chr7 (110-223)||(13919422-13919535)
chr7 (110-223)||(1860031-1860144)
chr7 (110-223)||(25928381-25928494)
chr7 (110-194)||(7520225-7520309)
chr7 (110-194)||(10607330-10607414)
chr7 (110-194)||(13891615-13891699)
chr7 (111-194)||(18424220-18424303)
chr7 (110-188)||(20486733-20486811)
chr7 (110-194)||(39268323-39268407)
chr7 (110-189)||(14420777-14420856)
chr7 (110-189)||(16004994-16005073)
chr7 (110-189)||(18606328-18606407)
chr7 (110-189)||(18871287-18871366)
chr7 (112-194)||(39721180-39721263)
chr7 (112-223)||(45171512-45171623)
chr7 (112-194)||(2833493-2833575)
chr7 (110-194)||(9752517-9752601)
chr7 (110-190)||(11660271-11660351)
chr7 (110-194)||(13891998-13892082)
chr7 (110-194)||(16582406-16582490)
chr7 (110-189)||(10897906-10897985)
chr7 (112-194)||(31710-31792)
chr7 (112-194)||(12706134-12706216)
chr7 (112-194)||(12713525-12713607)
chr7 (112-194)||(12722183-12722265)
chr7 (112-194)||(16908521-16908603)
chr7 (112-194)||(18277979-18278061)
chr7 (112-194)||(18281943-18282025)
chr7 (115-188)||(838148-838221)
chr7 (115-188)||(1203328-1203401)
chr7 (110-194)||(26291141-26291226)
chr7 (110-189)||(146490-146569)
chr7 (112-194)||(15083210-15083293)
chr7 (115-190)||(16109990-16110065)
chr7 (110-189)||(41283635-41283714)
chr7 (112-194)||(72383-72465)
chr7 (112-194)||(76492-76574)
chr7 (112-194)||(2531344-2531425)
chr7 (153-223)||(9752728-9752798)
chr7 (112-194)||(12717272-12717354)
chr7 (115-190)||(834060-834135)
chr7 (115-190)||(1199240-1199315)
chr7 (110-194)||(15213033-15213117)
chr7 (110-223)||(18301315-18301420)
chr7 (153-223)||(7520353-7520423)
chr7 (153-223)||(10607457-10607527)
chr7 (153-223)||(13891502-13891572)
chr7 (153-223)||(13891885-13891955)
chr7 (153-223)||(16582293-16582363)
chr7 (153-211)||(39268450-39268508)
chr7 (136-189)||(15166240-15166293)
chr7 (110-179)||(16185524-16185593)
chr7 (110-206)||(23666462-23666557)
chr7 (153-223)||(834182-834251)
chr7 (153-223)||(838270-838339)
chr7 (153-223)||(1199362-1199431)
chr7 (153-223)||(1203450-1203519)
chr7 (159-206)||(11660171-11660218)
chr7 (136-178)||(11302308-11302350)
chr7 (153-194)||(9752644-9752685)
chr7 (110-158)||(11394888-11394936)
chr7 (153-223)||(16110112-16110181)
chr7 (153-223)||(41283518-41283587)
[»] chr3 (67 HSPs)
chr3 (110-223)||(15463834-15463947)
chr3 (110-194)||(12853373-12853457)
chr3 (110-192)||(16795490-16795572)
chr3 (112-194)||(11301677-11301759)
chr3 (110-188)||(14670017-14670095)
chr3 (112-192)||(5219834-5219914)
chr3 (110-189)||(3801960-3802039)
chr3 (110-189)||(14764805-14764884)
chr3 (110-189)||(20249859-20249938)
chr3 (110-189)||(54519587-54519666)
chr3 (112-194)||(11853691-11853773)
chr3 (112-194)||(14664410-14664492)
chr3 (110-188)||(18899444-18899522)
chr3 (113-194)||(14667574-14667655)
chr3 (110-182)||(10834951-10835023)
chr3 (110-190)||(13435807-13435887)
chr3 (118-194)||(19774183-19774259)
chr3 (115-223)||(23173254-23173361)
chr3 (110-189)||(9532248-9532327)
chr3 (111-194)||(16751912-16751995)
chr3 (112-194)||(7108223-7108305)
chr3 (112-194)||(7112158-7112240)
chr3 (112-194)||(11068598-11068680)
chr3 (112-194)||(14497932-14498014)
chr3 (118-188)||(14681541-14681611)
chr3 (112-194)||(22320114-22320196)
chr3 (112-194)||(22335169-22335251)
chr3 (112-194)||(55021361-55021443)
chr3 (110-183)||(12304170-12304243)
chr3 (110-194)||(30064369-30064454)
chr3 (110-194)||(8928877-8928961)
chr3 (110-189)||(41124-41203)
chr3 (112-223)||(15963453-15963564)
chr3 (112-223)||(15967377-15967488)
chr3 (112-223)||(15971301-15971412)
chr3 (110-189)||(23372553-23372632)
chr3 (110-189)||(29545948-29546027)
chr3 (110-189)||(51299523-51299602)
chr3 (112-193)||(4108800-4108882)
chr3 (112-193)||(4112649-4112731)
chr3 (112-194)||(11167105-11167187)
chr3 (112-194)||(15616162-15616244)
chr3 (112-194)||(28948446-28948528)
chr3 (110-194)||(18933365-18933450)
chr3 (110-194)||(11912412-11912496)
chr3 (110-223)||(8491742-8491844)
chr3 (110-189)||(16326051-16326130)
chr3 (110-181)||(38312867-38312938)
chr3 (109-179)||(17318518-17318588)
chr3 (110-179)||(4590170-4590239)
chr3 (111-198)||(16840214-16840301)
chr3 (153-223)||(8929004-8929074)
chr3 (116-188)||(12337248-12337319)
chr3 (153-223)||(12853500-12853570)
chr3 (153-223)||(12337129-12337198)
chr3 (153-223)||(17348864-17348934)
chr3 (110-179)||(14068072-14068141)
chr3 (153-223)||(11301802-11301871)
chr3 (153-206)||(13435707-13435760)
chr3 (110-158)||(5841187-5841235)
chr3 (110-157)||(45220972-45221019)
chr3 (153-223)||(41007-41076)
chr3 (153-203)||(10835078-10835128)
chr3 (187-223)||(4590236-4590272)
chr3 (150-194)||(15555623-15555667)
chr3 (187-223)||(17318585-17318621)
chr3 (112-148)||(37440692-37440728)
[»] chr2 (23 HSPs)
chr2 (110-220)||(9783953-9784063)
chr2 (110-189)||(19663567-19663646)
chr2 (110-189)||(20260247-20260326)
chr2 (112-223)||(41532454-41532565)
chr2 (110-183)||(21074517-21074590)
chr2 (110-189)||(6481774-6481853)
chr2 (110-189)||(6485241-6485320)
chr2 (110-189)||(9240664-9240743)
chr2 (112-194)||(10103308-10103390)
chr2 (112-194)||(12902618-12902700)
chr2 (112-194)||(24630059-24630141)
chr2 (112-194)||(27381005-27381087)
chr2 (112-194)||(27384975-27385057)
chr2 (112-194)||(27600356-27600438)
chr2 (112-194)||(30346669-30346751)
chr2 (110-189)||(37379026-37379105)
chr2 (112-194)||(24645136-24645218)
chr2 (112-194)||(24647079-24647161)
chr2 (112-194)||(24647912-24647994)
chr2 (112-194)||(31343902-31343984)
chr2 (126-189)||(10686272-10686335)
chr2 (153-206)||(21074644-21074697)
chr2 (153-223)||(37378909-37378978)
[»] chr4 (45 HSPs)
chr4 (110-223)||(631757-631870)
chr4 (110-194)||(17052455-17052539)
chr4 (110-194)||(12422928-12423012)
chr4 (110-194)||(22634936-22635020)
chr4 (111-194)||(15223531-15223614)
chr4 (112-194)||(20158459-20158541)
chr4 (112-194)||(20163910-20163992)
chr4 (110-190)||(24048394-24048474)
chr4 (110-189)||(15533209-15533288)
chr4 (110-189)||(36036942-36037021)
chr4 (153-223)||(22635063-22635133)
chr4 (110-194)||(13813842-13813926)
chr4 (110-194)||(13818330-13818414)
chr4 (110-194)||(23996976-23997059)
chr4 (110-189)||(18211594-18211673)
chr4 (115-190)||(30145772-30145847)
chr4 (112-194)||(4562785-4562867)
chr4 (112-194)||(5758467-5758549)
chr4 (112-194)||(9555054-9555136)
chr4 (112-194)||(14759003-14759085)
chr4 (112-194)||(14955771-14955853)
chr4 (112-194)||(17807039-17807121)
chr4 (112-194)||(20161135-20161217)
chr4 (112-194)||(33740821-33740903)
chr4 (110-189)||(28384841-28384920)
chr4 (112-194)||(12486256-12486338)
chr4 (112-194)||(25688427-25688509)
chr4 (110-189)||(49549092-49549172)
chr4 (110-223)||(10711792-10711894)
chr4 (110-223)||(10925562-10925664)
chr4 (136-206)||(14047291-14047361)
chr4 (153-223)||(13813969-13814039)
chr4 (153-223)||(13818541-13818611)
chr4 (153-223)||(17052582-17052652)
chr4 (110-179)||(27532752-27532821)
chr4 (153-223)||(12422821-12422891)
chr4 (153-223)||(20164035-20164104)
chr4 (153-223)||(30145656-30145725)
chr4 (114-190)||(38106935-38107011)
chr4 (153-223)||(24048605-24048674)
chr4 (153-194)||(13818457-13818498)
chr4 (153-211)||(20158584-20158641)
chr4 (185-223)||(20161291-20161329)
chr4 (153-223)||(28384724-28384793)
chr4 (153-190)||(24048521-24048558)
[»] scaffold0200 (1 HSPs)
scaffold0200 (112-214)||(10732-10834)
[»] chr5 (31 HSPs)
chr5 (110-194)||(22120601-22120685)
chr5 (110-194)||(15238127-15238211)
chr5 (110-189)||(38146428-38146507)
chr5 (111-194)||(10751802-10751885)
chr5 (110-189)||(23113412-23113491)
chr5 (110-189)||(28372091-28372170)
chr5 (110-189)||(37600018-37600097)
chr5 (112-194)||(11219540-11219622)
chr5 (112-194)||(18354782-18354864)
chr5 (112-194)||(24768574-24768656)
chr5 (110-194)||(20912262-20912346)
chr5 (110-189)||(19510452-19510531)
chr5 (110-189)||(22339002-22339081)
chr5 (112-194)||(11224126-11224208)
chr5 (112-194)||(11227948-11228030)
chr5 (112-194)||(19474184-19474266)
chr5 (112-194)||(20294499-20294581)
chr5 (110-223)||(22749118-22749230)
chr5 (110-189)||(22335472-22335551)
chr5 (110-189)||(41878661-41878740)
chr5 (112-194)||(11226142-11226224)
chr5 (112-194)||(11229938-11230020)
chr5 (110-194)||(22108459-22108542)
chr5 (117-189)||(33473948-33474020)
chr5 (110-194)||(36459533-36459617)
chr5 (153-223)||(22108585-22108655)
chr5 (112-194)||(40727411-40727492)
chr5 (153-223)||(22120728-22120798)
chr5 (110-206)||(9774914-9775009)
chr5 (153-223)||(33474068-33474137)
chr5 (110-157)||(19075911-19075958)
[»] scaffold0124 (4 HSPs)
scaffold0124 (110-194)||(25577-25661)
scaffold0124 (153-223)||(25704-25774)
scaffold0124 (153-206)||(37669-37722)
scaffold0124 (136-189)||(37568-37621)
[»] scaffold1852 (2 HSPs)
scaffold1852 (112-194)||(832-914)
scaffold1852 (159-223)||(963-1026)
[»] scaffold0410 (1 HSPs)
scaffold0410 (112-194)||(14829-14911)
[»] scaffold0327 (2 HSPs)
scaffold0327 (110-194)||(18808-18892)
scaffold0327 (153-223)||(18695-18765)
[»] scaffold0293 (1 HSPs)
scaffold0293 (110-223)||(21349-21454)
[»] scaffold0142 (2 HSPs)
scaffold0142 (110-194)||(8749-8833)
scaffold0142 (153-223)||(8876-8946)
[»] scaffold0080 (4 HSPs)
scaffold0080 (110-194)||(33922-34006)
scaffold0080 (110-185)||(28466-28541)
scaffold0080 (153-205)||(28401-28453)
scaffold0080 (153-205)||(33827-33879)
[»] scaffold1427 (1 HSPs)
scaffold1427 (110-189)||(190-269)
[»] scaffold0337 (1 HSPs)
scaffold0337 (110-189)||(10831-10910)
[»] scaffold0141 (1 HSPs)
scaffold0141 (112-223)||(15586-15697)
[»] scaffold0026 (1 HSPs)
scaffold0026 (110-189)||(109591-109670)
[»] scaffold0012 (2 HSPs)
scaffold0012 (110-189)||(224152-224231)
scaffold0012 (153-223)||(224279-224348)
[»] scaffold0166 (1 HSPs)
scaffold0166 (112-194)||(11071-11153)
[»] scaffold0031 (1 HSPs)
scaffold0031 (110-188)||(37212-37290)
[»] scaffold0003 (2 HSPs)
scaffold0003 (113-194)||(70740-70821)
scaffold0003 (159-223)||(70628-70691)
[»] scaffold1873 (1 HSPs)
scaffold1873 (153-223)||(563-633)
[»] scaffold0486 (1 HSPs)
scaffold0486 (112-194)||(8562-8644)
[»] scaffold0372 (1 HSPs)
scaffold0372 (112-194)||(6332-6414)
[»] scaffold0349 (1 HSPs)
scaffold0349 (112-194)||(11036-11118)
[»] scaffold0028 (1 HSPs)
scaffold0028 (112-194)||(60337-60419)
[»] scaffold0023 (1 HSPs)
scaffold0023 (113-194)||(11762-11843)
[»] scaffold0842 (1 HSPs)
scaffold0842 (110-189)||(5232-5311)
[»] scaffold0544 (1 HSPs)
scaffold0544 (110-189)||(3526-3605)
[»] scaffold0525 (1 HSPs)
scaffold0525 (116-223)||(5546-5653)
[»] scaffold0157 (1 HSPs)
scaffold0157 (112-194)||(34139-34221)
[»] scaffold0061 (1 HSPs)
scaffold0061 (112-194)||(68567-68649)
[»] scaffold0599 (1 HSPs)
scaffold0599 (110-194)||(4106-4190)
[»] scaffold0380 (1 HSPs)
scaffold0380 (110-179)||(3974-4043)
[»] scaffold0139 (2 HSPs)
scaffold0139 (110-179)||(23947-24016)
scaffold0139 (187-223)||(24013-24049)
[»] scaffold0029 (2 HSPs)
scaffold0029 (110-179)||(62849-62918)
scaffold0029 (187-223)||(62915-62951)
[»] scaffold0299 (2 HSPs)
scaffold0299 (116-188)||(5817-5888)
scaffold0299 (153-223)||(5698-5767)
[»] scaffold0109 (2 HSPs)
scaffold0109 (110-179)||(37207-37276)
scaffold0109 (187-223)||(37273-37309)
[»] scaffold0002 (2 HSPs)
scaffold0002 (145-194)||(115390-115438)
scaffold0002 (153-214)||(115481-115541)
[»] scaffold0001 (1 HSPs)
scaffold0001 (121-198)||(163588-163665)


Alignment Details
Target: chr6 (Bit Score: 98; Significance: 3e-48; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 2076355 - 2076242
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  2076355 gttatctatgagttgttaaatgtatttgatgatgattatgttaagttgataagttgttttttattcatgaattgataatgagatgcttggtggagaaatg 2076256  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  2076255 ttattacgaattaa 2076242  T

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Target: chr6; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 22075402 - 22075484
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22075402 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 22075484  T

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Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 23393708 - 23393597
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  23393708 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 23393609  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  23393608 attacgaattaa 23393597  T

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Target: chr6; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 23413616 - 23413505
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  23413616 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 23413517  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  23413516 attacgaattaa 23413505  T

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Target: chr6; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 27222901 - 27222822
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  27222901 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 27222822  T

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Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 31479473 - 31479556
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  31479473 ttatctatgagttgttaaatgtatttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 31479556  T

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Target: chr6; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 19869254 - 19869172
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  19869254 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatg 19869172  T

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Target: chr6; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 12941290 - 12941217
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattg 183  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  12941290 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattg 12941217  T

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Target: chr6; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 23400747 - 23400662
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||    
T  23400747 gttatctatgagttgttaaatgtacttgatgatggttatgttaaagttgataagttgtcctttattcatgaattgataatgagatg 23400662  T

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Target: chr6; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 194
Target Start/End: Original strand, 27416540 - 27416621
Alignment:
Q  113 atctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  27416540 atctatgagttgttaagtgtacttgatgatgtttatgttaagttgataggttgtcttttattcatgaattgataatgagatg 27416621  T

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Target: chr6; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 8242479 - 8242397
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  8242479 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 8242397  T

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Target: chr6; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11565468 - 11565386
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  11565468 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 11565386  T

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Target: chr6; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 11716952 - 11717034
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  11716952 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 11717034  T

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Target: chr6; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 12620345 - 12620427
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12620345 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12620427  T

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Target: chr6; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 23988370 - 23988292
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||||||| |||||||||||||||    
T  23988370 tatctatgagttgttaagtgtacttgatgatgtttatattaaattgataagttgtcttttattaatgaattgataatga 23988292  T

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Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 27555606 - 27555525
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  27555606 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgat-agttgtcttttattcatgaattgataatgagatg 27555525  T

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Target: chr6; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 25737961 - 25737873
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttg 198  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||  ||||||||| |||| ||||||||||||||    
T  25737961 gttatctatgagttggtaaatgtacttgatgatgattatgctaagttgataagttgtcccttattcatgtattgctaatgagatgcttg 25737873  T

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Target: chr6; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 4475864 - 4475785
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  4475864 gttatttatgagttgttaaatgtacttgatgattgttatgttaagttgataagttgtcttttattcatgaattgctaatg 4475785  T

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Target: chr6; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 116 - 194
Target Start/End: Complemental strand, 14470944 - 14470866
Alignment:
Q  116 tatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||  |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  14470944 tatgagttgttaggtgtacttgatgatgtttatgttaggttgataagttgtcttttattcatgaattgataatgagatg 14470866  T

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Target: chr6; HSP #20
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22861822 - 22861740
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  22861822 tatctatgagttgttaagtgtacttggtgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 22861740  T

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Target: chr6; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22947734 - 22947652
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  22947734 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattagtgaattgataatgagatg 22947652  T

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Target: chr6; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22951690 - 22951608
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  22951690 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattagtgaattgataatgagatg 22951608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 23870178 - 23870096
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  23870178 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattagtgaattgataatgagatg 23870096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 23874134 - 23874052
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  23874134 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattagtgaattgataatgagatg 23874052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 28290904 - 28290982
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||| ||||    
T  28290904 gttatctataagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcataaattgctaat 28290982  T

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Target: chr6; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 16622903 - 16622822
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||| |||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||||    
T  16622903 ttatctatgaattgttaaatgtacttgatgatgtttatgttaagttgataagt--tcttttattcatgaaatgataatgagatg 16622822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 114 - 194
Target Start/End: Complemental strand, 23538046 - 23537966
Alignment:
Q  114 tctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||||  |||||| ||||||| ||||||||||    
T  23538046 tctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcccttattcgtgaattgttaatgagatg 23537966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 23955431 - 23955359
Alignment:
Q  117 atgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  23955431 atgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgttaatg 23955359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 16758782 - 16758700
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||| |||| |||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||| |||||||    
T  16758782 tatctatgagttattaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgatagtgagatg 16758700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 18918590 - 18918659
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  18918590 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 18918659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 34297782 - 34297866
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||    
T  34297782 gttatctatgagttgttaaatgtacttgctgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagatg 34297866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 115 - 194
Target Start/End: Complemental strand, 1254223 - 1254144
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||    
T  1254223 ctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgttccttattcatgtattgttaatgagatg 1254144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 113 - 179
Target Start/End: Original strand, 18953496 - 18953562
Alignment:
Q  113 atctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||    
T  18953496 atctaggagttgttaaatgtacttgatgatgattatgttaagtcgataagttgtcttctattcatga 18953562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 27416670 - 27416733
Alignment:
Q  159 taagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  27416670 taagttgtcttctatt-atgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 27416733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 23537845 - 23537775
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| |||||||||||  |||||||| ||| |||||| ||||||||||||||| | ||||| ||||||||    
T  23537845 agttgctaagttgtcttcaattcatgatttgctaatgaaatgcttggtggagaatttttattacgaattaa 23537775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 27555482 - 27555413
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| ||||| ||| |||||||||||||||||||| ||||||||    
T  27555482 agttgttaagttgtcttctatt-atgagttgctaatgtgatacttggtggagaaatgttattacgaattaa 27555413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 23537923 - 23537882
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||| ||||||||||||||||||||||||| ||||||||||    
T  23537923 agttgctaagttgtcttttattcatgaattgctaatgagatg 23537882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 28707928 - 28707880
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttga 158  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||    
T  28707928 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttga 28707880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 22075527 - 22075596
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| |||||||| |||||| | |||||||||||| ||||||||    
T  22075527 agttgctaagttgtcttctatt-atgagttgctaatgagaagcttggggaagaaatgttattacgaattaa 22075596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 23955311 - 23955242
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  23955311 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 23955242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 18918656 - 18918692
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  18918656 atgagatgcttggtggagaaatgttattacaaattaa 18918692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 18953559 - 18953595
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  18953559 atgagatgcttggtggagaaatgttattacaaattaa 18953595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 1e-47; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 111 - 223
Target Start/End: Original strand, 41801289 - 41801401
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgt 210  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  41801289 ttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatat 41801388  T
Q  211 tattgcgaattaa 223  Q
    |||| ||||||||    
T  41801389 tattacgaattaa 41801401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 22132108 - 22132192
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22132108 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 22132192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 16370994 - 16370915
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  16370994 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 16370915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 41389675 - 41389758
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||| |||||||||||||    
T  41389675 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgttttttattcatgaaatgataatgagatg 41389758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 190
Target Start/End: Complemental strand, 33796100 - 33796022
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  33796100 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatga 33796022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 1009329 - 1009247
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  1009329 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 1009247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 1926807 - 1926889
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  1926807 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 1926889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 16376827 - 16376909
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  16376827 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 16376909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 20925821 - 20925903
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  20925821 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 20925903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 20230148 - 20230233
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  20230148 gttatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtcttttattcatgaattaataatgagatg 20230233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 39245181 - 39245262
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||||    
T  39245181 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagt--tcttttattcatgaaatgataatgagatg 39245262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 39248736 - 39248817
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||| |||||||||||||    
T  39248736 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagt--tcttttattcatgaaatgataatgagatg 39248817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 32649136 - 32649057
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  32649136 gttatttatgagttgttaaatgtacttgatgattgttatgttaagttgataagttgtcttttattcatgaattgctaatg 32649057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 21406322 - 21406220
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||           |||||||||||||||||||||||    
T  21406322 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattc-----------atgagatgcttggtggagaaatg 21406234  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  21406233 ttattacgaattaa 21406220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 29533951 - 29533876
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||||  ||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  29533951 ctatgagttgttaaatgtgtttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 29533876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 52634335 - 52634253
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||| | ||||||| |||||||||||||||||||    
T  52634335 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttattttttattaatgaattgataatgagatg 52634253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 22132241 - 22132305
Alignment:
Q  159 taagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||  |||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  22132241 taagttgtcttccattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 22132305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 176
Target Start/End: Original strand, 11809959 - 11810025
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattca 176  Q
    |||| ||||||||||||||||||||||||||| | | || |||||||||||||| ||||| ||||||    
T  11809959 gttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattca 11810025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 29533829 - 29533760
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  29533829 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 29533760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 20439188 - 20439241
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||| |||| ||||||||||||||||||||||||||||| |||| |||||    
T  20439188 tgatgatggttatgttaagttgataagttgtcttttattcatgtattgctaatg 20439241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 16370867 - 16370798
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||| || |||||||||||| ||||||| | ||||||||    
T  16370867 agttgctaagttgtcttatattcatgagttgttaataaggtgcttggtggag-aatgttaatacgaattaa 16370798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 6970 - 7083
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  6970 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttagtgaagaaatg 7069  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  7070 ttattacgaattaa 7083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 74341 - 74454
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  74341 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgagttgctaatgagatgcttggtggagaaatg 74440  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  74441 ttattacgaattaa 74454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 8e-46; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 23913334 - 23913221
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23913334 gttatctataagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggacaaatg 23913235  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  23913234 ttattacgaattaa 23913221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 44385843 - 44385927
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  44385843 gttatctatgagttgttaaatgtacttgatgatgattatgttaacttgataagttgtcttttattcatgaattgataatgagatg 44385927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 14399104 - 14399215
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  14399104 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 14399203  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  14399204 attacgaattaa 14399215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 23427895 - 23427815
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  23427895 gttatctatgagttgttaaatgtacttaatgatggttatgttaagttgataagttgtcttttattcatgaattgataatga 23427815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 18864116 - 18864227
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  18864116 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 18864215  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  18864216 attacgaattaa 18864227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 11355852 - 11355771
Alignment:
Q  11 acatcatcacgatatttctgtagatatgatctcaaaatctgcaatataaagaaaatagacattctttcaggctggagaaata 92  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  11355852 acatcatcgcgatatttctgtagatatgatcttaaaatctgcaatataaagaaaatagatattcttttaggctggagaaata 11355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 30941576 - 30941687
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||| |||||||||||||||| ||| || | || | ||    
T  30941576 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcataaattgataatgagatgtttgatgaataagtatt 30941675  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  30941676 attacgaattaa 30941687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 21829472 - 21829554
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  21829472 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 21829554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 21974195 - 21974277
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  21974195 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 21974277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 43250269 - 43250187
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  43250269 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 43250187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 110 - 198
Target Start/End: Complemental strand, 21328635 - 21328547
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttg 198  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||||||    
T  21328635 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagatgcttg 21328547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 21409968 - 21409885
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  21409968 tatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtcttttattaatgaattgataatgagatg 21409885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 21804460 - 21804377
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||    
T  21804460 tatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtcttttattaatgaattgataatgagatg 21804377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 21978305 - 21978387
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||  |||||||||||||||||||| |||||||||||||||||||    
T  21978305 tatctatgagttgttaagtgtacttgatgatgtttatgttatattgataagttgtcttttattaatgaattgataatgagatg 21978387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22110668 - 22110586
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||  |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  22110668 tatctatgagttgttaagtgtacttgatgatttttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 22110586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 11774358 - 11774286
Alignment:
Q  117 atgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  11774358 atgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgttaatg 11774286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 8414986 - 8415065
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||| | | |||| |||||||||||||||||||||||||||||||||| |||||    
T  8414986 gttacctatgagttgttaaatgtacttgattagggttattttaagttgataagttgtcttttattcatgaattgctaatg 8415065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 27942700 - 27942775
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||||||||||||||| ||||  |||||| |||||||||||||||||||||||||| ||||||    
T  27942700 ctatgagttgttaaatgtacttgatgatggttatgataagttaataagttgtcttttattcatgaattgctaatga 27942775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 21386228 - 21386159
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  21386228 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 21386159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 23427768 - 23427698
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  23427768 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 23427698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 363327 - 363258
Alignment:
Q  120 agttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||| |||||    
T  363327 agttgttaaatgtacttgttgatggttatgttaagatgataagttgtcttttattcatgaattgctaatg 363258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 21968002 - 21968071
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  21968002 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatga 21968071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 21980842 - 21980911
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  21980842 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatga 21980911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 21985825 - 21985894
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  21985825 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatga 21985894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 22000788 - 22000857
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||||    
T  22000788 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttctattcatga 22000857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 22009206 - 22009275
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||||||||||||||| || |||||||||    
T  22009206 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtgttctattcatga 22009275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 42560891 - 42560975
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||| ||||| || |||| ||||||||| |||||||   ||||||||| |||| ||||||||||    
T  42560891 gttatctatgagttgttaaatgtacgtgatggtggttatgttaagttgacaagttgttccttattcatgcattgctaatgagatg 42560975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 223
Target Start/End: Original strand, 44385972 - 44386034
Alignment:
Q  161 agttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||| ||||||||| ||| |||||||||||||||| ||||||||||||| ||||||||    
T  44385972 agttgtcttctattcatgagttgctaatgagatgcttggttgagaaatgttattacgaattaa 44386034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 8729645 - 8729698
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  8729645 tgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 8729698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 11774238 - 11774169
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  11774238 agttgataagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 11774169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 44494233 - 44494280
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttg 157  Q
    |||| |||||| |||||||||||||||||||||| |||| ||||||||    
T  44494233 gttacctatgaattgttaaatgtacttgatgatggttatgttaagttg 44494280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 8415113 - 8415166
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| ||||||||||||||    
T  8415113 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggagaa 8415166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 13919422 - 13919535
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||| |||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13919422 gttatatatgagttgttaaatgtacttgatgacgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 13919521  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  13919522 ttattacgaattaa 13919535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 1860031 - 1860144
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||| |||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1860031 gttatatatgagttgttaaatgtacttgatgacgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatgtttggtggagaaatg 1860130  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  1860131 ttattacgaattaa 1860144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 25928381 - 25928494
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||    
T  25928381 gttatctatgagttgttaaatgtactttatgatggttatgttaagttgataagttgttttttattcatgaattgctaatgagatgcttggttgagaaatg 25928480  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  25928481 ttattacgaattaa 25928494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 7520225 - 7520309
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  7520225 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttgataagttgtcttttattcatgaattgataatgagatg 7520309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 10607330 - 10607414
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  10607330 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttagtcatgaattgataatgagatg 10607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 13891699 - 13891615
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  13891699 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatgagatg 13891615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 18424303 - 18424220
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  18424303 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 18424220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 20486811 - 20486733
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  20486811 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataat 20486733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 39268323 - 39268407
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  39268323 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgccttttattcatgaatttataatgagatg 39268407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 14420856 - 14420777
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  14420856 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 14420777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 16005073 - 16004994
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  16005073 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 16004994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 18606407 - 18606328
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  18606407 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 18606328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 18871366 - 18871287
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  18871366 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 18871287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 39721263 - 39721180
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  39721263 tatctatgagttgttaaatgtacttgatgatggttatgttaaagttgataagttgtcttttattcatgaattgataatgagatg 39721180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 45171512 - 45171623
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  45171512 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 45171611  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  45171612 attacgaattaa 45171623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 2833493 - 2833575
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  2833493 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 2833575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 9752517 - 9752601
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||| ||||| |||| |||||||||||||||| |||||||||||||||| |||||||||||    
T  9752517 gttatctatgagttgttaaatgtacttggtgatggttatgttaagttgataagttgccttttattcatgaatttataatgagatg 9752601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 11660351 - 11660271
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||| ||||||    
T  11660351 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttggtaagttgtcttttattcatgaattgctaatga 11660271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 13892082 - 13891998
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||| | ||||||||| ||||||||||    
T  13892082 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttttgcatgaattgctaatgagatg 13891998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 16582490 - 16582406
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||| |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||||||||||||||||||||    
T  16582490 gttatttatgagttgttaaatgtacttgatgatggttatgataagttgataagttgtctttttttcatgaattgataatgagatg 16582406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 10897906 - 10897985
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  10897906 gttatctatgagtcgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 10897985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 31792 - 31710
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  31792 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 31710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 12706134 - 12706216
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12706134 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12706216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 12713607 - 12713525
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12713607 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12713525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 12722265 - 12722183
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12722265 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 16908521 - 16908603
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  16908521 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 16908603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 18278061 - 18277979
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  18278061 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattgatgaattgataatgagatg 18277979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 18282025 - 18281943
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  18282025 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattgatgaattgataatgagatg 18281943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 838148 - 838221
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  838148 ctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaat 838221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 115 - 188
Target Start/End: Original strand, 1203328 - 1203401
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  1203328 ctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaat 1203401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 26291226 - 26291141
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  26291226 gttatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtcttttattcatgaattaataatgagatg 26291141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 146569 - 146490
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| || |||||||||| |||||    
T  146569 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctactcatgaattgctaatg 146490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 15083293 - 15083210
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaag-ttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  15083293 tatctatgagttgttaagtgtacttgatgatggttatgttaaaattgataagttgtcttttattcatgaattgataatgagatg 15083210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 16109990 - 16110065
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||||||||| ||||||    
T  16109990 ctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttatcttttattcatgaattgctaatga 16110065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 41283714 - 41283635
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  41283714 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgctaatg 41283635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 72383 - 72465
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||| ||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  72383 tatctatgaattgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 72465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 76492 - 76574
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||| ||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  76492 tatctatgaattgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 76574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 2531344 - 2531425
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||    
T  2531344 tatctatgagttgttaggtgtacttgatgatg-ttatgttaagttgataagttgtcttttattcatgaattgataaagagatg 2531425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 9752728 - 9752798
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||    
T  9752728 agttgataagttatcttttattcatgaattgataatgagatgcttggtggagaaatattattacgaattaa 9752798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 12717354 - 12717272
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||| ||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12717354 tatctatgagttgttaagtgtacttgctgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12717272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 834060 - 834135
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    |||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  834060 ctatgagttgttaattctacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 834135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 115 - 190
Target Start/End: Original strand, 1199240 - 1199315
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    |||||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  1199240 ctatgagttgttaattctacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 1199315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 15213117 - 15213033
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||    
T  15213117 gttatccatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagatg 15213033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 18301420 - 18301315
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||        |||| |||||||||  || |||||||||||||||||||||||||    
T  18301420 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttg--------tcttctattcatgagctgctaatgagatgcttggtggagaaatg 18301329  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  18301328 ttattacgaattaa 18301315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 7520353 - 7520423
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  7520353 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 7520423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 10607457 - 10607527
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  10607457 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 10607527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 13891572 - 13891502
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  13891572 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 13891502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 13891955 - 13891885
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||    
T  13891955 agttgctaagttgtcttctattcatgagttgctaatgagatgcttgatggagaaatgttattacgaattaa 13891885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 16582363 - 16582293
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||||||||  |  |||||||||||||||||||||||||||||| ||||||||    
T  16582363 agttgctaagttgtcttctattcatgagatactaatgagatgcttggtggagaaatgttattacgaattaa 16582293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 39268450 - 39268508
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||||| ||||    
T  39268450 agttgataagttgtcttctattcatgagttgctaatgagatgcttggtggagaattgtt 39268508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 136 - 189
Target Start/End: Complemental strand, 15166293 - 15166240
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  15166293 tgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 15166240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 16185593 - 16185524
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||| ||||||||||||||||||||||||||| | | || |||||||||||||| ||||| |||||||||    
T  16185593 gttacctatgagttgttaaatgtacttgatgagggtcatgttaagttgataagtcgtcttctattcatga 16185524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 206
Target Start/End: Original strand, 23666462 - 23666557
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    |||||||||||||||||||||||||||||||||| |||  |  ||||| ||||||||| | ||||||||| ||| |||| || |||| |||||||||    
T  23666462 gttatctatgagttgttaaatgtacttgatgatg-ttacgtatagttgctaagttgtcctctattcatgagttgttaataaggtgctaggtggagaa 23666557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 834182 - 834251
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  834182 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 834251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 838270 - 838339
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  838270 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 838339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 1199362 - 1199431
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  1199362 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 1199431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 1203450 - 1203519
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  1203450 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 1203519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 206
Target Start/End: Complemental strand, 11660218 - 11660171
Alignment:
Q  159 taagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  11660218 taagttgtcttctattcatgagttgttaatgagatgcttggtggagaa 11660171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 11302350 - 11302308
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatg 178  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  11302350 tgatgatggttatgttaagttgataagttgtcttttattcatg 11302308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 9752644 - 9752685
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  9752644 agttgataagttgtcttttatccatgaatttataatgagatg 9752685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Original strand, 11394888 - 11394936
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttga 158  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||    
T  11394888 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttga 11394936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 16110112 - 16110181
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||| ||||||| ||||||||| ||| |||||||||||| ||||||| ||||||| | ||||||||    
T  16110112 agttgttaacttgtcttctattcatgagttgttaatgagatgctgggtggag-aatgttaatacgaattaa 16110181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 41283587 - 41283518
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  41283587 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 41283518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 8e-46; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 15463947 - 15463834
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||| |||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15463947 gttatatatgagttgttaaatgtacttgatgacgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 15463848  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  15463847 ttattacgaattaa 15463834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 12853373 - 12853457
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12853373 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 12853457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 16795572 - 16795490
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgaga 192  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  16795572 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgaga 16795490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 11301677 - 11301759
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11301677 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 11301759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 14670095 - 14670017
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  14670095 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataat 14670017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 5219914 - 5219834
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgaga 192  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  5219914 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgaga 5219834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 3802039 - 3801960
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  3802039 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 3801960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 14764805 - 14764884
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  14764805 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 14764884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 20249859 - 20249938
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  20249859 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 20249938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 54519666 - 54519587
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  54519666 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 54519587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11853773 - 11853691
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  11853773 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcacgaattgataatgagatg 11853691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 14664492 - 14664410
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14664492 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttctattcatgaattgataatgagatg 14664410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 188
Target Start/End: Complemental strand, 18899522 - 18899444
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  18899522 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaat 18899444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 14667655 - 14667574
Alignment:
Q  113 atctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||| |||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  14667655 atctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttctattcatgaattgataatgagatg 14667574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 10834951 - 10835023
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaatt 182  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  10834951 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaatt 10835023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 190
Target Start/End: Complemental strand, 13435887 - 13435807
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  13435887 gttatatatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 13435807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 194
Target Start/End: Complemental strand, 19774259 - 19774183
Alignment:
Q  118 tgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  19774259 tgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 19774183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 115 - 223
Target Start/End: Complemental strand, 23173361 - 23173254
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttatt 214  Q
    |||||||||||||||| |||||||||||  |||| |||||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| |    
T  23173361 ctatgagttgttaaatatacttgatgatagttatgttaagttgataagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaat 23173263  T
Q  215 gcgaattaa 223  Q
     ||||||||    
T  23173262 acgaattaa 23173254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 9532327 - 9532248
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| |||||    
T  9532327 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttgataagttgtcttttattcatgaattgttaatg 9532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 111 - 194
Target Start/End: Original strand, 16751912 - 16751995
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||||| || |||||||||||||    
T  16751912 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttatcttttattcatcaaatgataatgagatg 16751995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 7108305 - 7108223
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  7108305 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 7108223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 7112240 - 7112158
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  7112240 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 7112158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11068680 - 11068598
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  11068680 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 11068598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 14498014 - 14497932
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  14498014 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 14497932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 118 - 188
Target Start/End: Complemental strand, 14681611 - 14681541
Alignment:
Q  118 tgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  14681611 tgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataat 14681541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22320196 - 22320114
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  22320196 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 22320114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 22335251 - 22335169
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  22335251 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 22335169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 55021443 - 55021361
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  55021443 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 55021361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 183
Target Start/End: Complemental strand, 12304243 - 12304170
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattg 183  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||    
T  12304243 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtattttattcatgaattg 12304170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 30064454 - 30064369
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  30064454 gttatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtcttttattcatgaattaataatgagatg 30064369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 8928877 - 8928961
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||| | || ||||||||||    
T  8928877 gttatctatgagttgttaaatgtacttgatggtggttatgttaagttgataagttgtcttttattcatggactgctaatgagatg 8928961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 41203 - 41124
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  41203 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgctaatg 41124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 15963564 - 15963453
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    |||||||||||| |||| |||||||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  15963564 tatctatgagttattaagtgtacttgatgatgtttatgttaaattaataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 15963465  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  15963464 attacgaattaa 15963453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 15967488 - 15967377
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    |||||||||||| |||| |||||||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  15967488 tatctatgagttattaagtgtacttgatgatgtttatgttaaattaataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 15967389  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  15967388 attacgaattaa 15967377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 112 - 223
Target Start/End: Complemental strand, 15971412 - 15971301
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    |||||||||||| |||| |||||||||||||| |||| |||| || ||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  15971412 tatctatgagttattaagtgtacttgatgatgtttatgttaaattaataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 15971313  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  15971312 attacgaattaa 15971301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 23372553 - 23372632
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  23372553 gttatttatgagttgttaaatgtacttgatgattgttatgttaagttgataagttgtcttttattcatgaattgctaatg 23372632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 29545948 - 29546027
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| |||||||||| |||||    
T  29545948 gttatctatgagttgttaaatgtacttgatgatggttgtgttaagttgataagttgtcttttagtcatgaattgctaatg 29546027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 51299602 - 51299523
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  51299602 gttatttatgagttgttaaatgtacttgatgattgttatgttaagttgataagttgtcttttattcatgaattgctaatg 51299523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 4108800 - 4108882
Alignment:
Q  112 tatctatgagttgttaaa-tgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagat 193  Q
    |||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  4108800 tatctatgagttgttaaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagat 4108882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 193
Target Start/End: Original strand, 4112649 - 4112731
Alignment:
Q  112 tatctatgagttgttaaa-tgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagat 193  Q
    |||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| ||||||||||||||||||    
T  4112649 tatctatgagttgttaaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagat 4112731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 11167105 - 11167187
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| | |||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  11167105 tatctatgagttgttaagtttacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 11167187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 15616244 - 15616162
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| ||||||||| |||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  15616244 tatctatgagttgttaagtgtacttgaagatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 15616162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 28948528 - 28948446
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||| ||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  28948528 tatctataagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 28948446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 18933365 - 18933450
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaa-gttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||| ||||||||||||||| |||||||||||    
T  18933365 gttatctatgagttgttaagtgtacttgatgatggttatgttaaagttgataagttgtattttattcatgaattaataatgagatg 18933450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 11912496 - 11912412
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||    
T  11912496 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagatg 11912412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 8491742 - 8491844
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||           |||||||||||||||||||||||    
T  8491742 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattc-----------atgagatgcttggtggagaaatg 8491830  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  8491831 ttattacgaattaa 8491844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 16326051 - 16326130
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||||| | |||| | |||||||||||||||||||||||||||||||| |||||    
T  16326051 gttacctatgagttgttaaatgtacttgatgagggttatgtcaagttgataagttgtcttttattcatgaattgctaatg 16326130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 181
Target Start/End: Original strand, 38312867 - 38312938
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaat 181  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||    
T  38312867 gttatctatgagtggttaaatgtacttgatgatggttatgttaagtttataagttgtcttttattcatgaat 38312938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 17318518 - 17318588
Alignment:
Q  109 agttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    ||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  17318518 agttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 17318588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 4590170 - 4590239
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  4590170 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 4590239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 111 - 198
Target Start/End: Original strand, 16840214 - 16840301
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttg 198  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||| ||||    
T  16840214 ttatctatgagttgttaaatgtatttgatgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagattcttg 16840301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 8929004 - 8929074
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  8929004 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 8929074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 12337319 - 12337248
Alignment:
Q  116 tatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    ||||||||||||| |||||||||||||| |||| |||| ||||| ||||||||||||||||||||||||||||    
T  12337319 tatgagttgttaagtgtacttgatgatgtttatgttaaattgat-agttgtcttttattcatgaattgataat 12337248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 12853500 - 12853570
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||    
T  12853500 agttgttaagttgtcttctattcatgagttgctaatgagatgtttggtggagaaatgttattacgaattaa 12853570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 12337198 - 12337129
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  12337198 agttgctaagttgtcttctatt-atgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 12337129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 17348864 - 17348934
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||  ||||||||||||||||||| ||||||||    
T  17348864 agttgctaagttgtcttctattcatgagttgctaatgagatatttggtggagaaatgttattacgaattaa 17348934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 14068072 - 14068141
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| |||||| |||||||| ||||||||| |||| |||||| ||||||||||||| |||||||||    
T  14068072 gttatctaggagttgctaaatgtatttgatgatggttatgttaagtcgataagttgtcttctattcatga 14068141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 11301802 - 11301871
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| || || |||||||||||||||||||||||| ||||||||    
T  11301802 agttgctaagttgtcttctatt-atgagttgctattgtgatgcttggtggagaaatgttattacgaattaa 11301871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 13435760 - 13435707
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||| |||||||||||  |||||||| ||| ||||||||||||||||||||||    
T  13435760 agttgttaagttgtcttcaattcatgagttgttaatgagatgcttggtggagaa 13435707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 158
Target Start/End: Complemental strand, 5841235 - 5841187
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttga 158  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||    
T  5841235 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttga 5841187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 45220972 - 45221019
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttg 157  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  45220972 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 45221019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 41076 - 41007
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  41076 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 41007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 10835078 - 10835128
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtgga 203  Q
    ||||| ||||||||||| |||| |||| ||| |||||||||||||||||||    
T  10835078 agttgctaagttgtcttctatttatgagttgttaatgagatgcttggtgga 10835128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 4590236 - 4590272
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  4590236 atgagatgcttggtggagaaatgttattacaaattaa 4590272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 15555667 - 15555623
Alignment:
Q  150 ttaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||| ||||||||||| ||||||||| ||| ||||||||||    
T  15555667 ttaagttgttaagttgtcttatattcatgagttgctaatgagatg 15555623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 17318585 - 17318621
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  17318585 atgagatgcttggtggagaaatgttattacaaattaa 17318621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 37440692 - 37440728
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattat 148  Q
    ||||||||||||||||| |||||||||||||| ||||    
T  37440692 tatctatgagttgttaagtgtacttgatgatggttat 37440728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 91; Significance: 5e-44; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 110 - 220
Target Start/End: Complemental strand, 9784063 - 9783953
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  9784063 gttatctatgagttgtttaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatc 9783964  T
Q  210 ttattgcgaat 220  Q
    ||||| |||||    
T  9783963 ttattacgaat 9783953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 19663567 - 19663646
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  19663567 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 19663646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 20260326 - 20260247
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  20260326 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 20260247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 41532454 - 41532565
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  41532454 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 41532553  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  41532554 attacgaattaa 41532565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 21074517 - 21074590
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattg 183  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  21074517 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattg 21074590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 6481853 - 6481774
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||    
T  6481853 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataggttgtcttttattcatgaattgctaatg 6481774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 6485320 - 6485241
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||    
T  6485320 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataggttgtcttttattcatgaattgctaatg 6485241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 9240743 - 9240664
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||| |||||    
T  9240743 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatgaattgctaatg 9240664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 10103308 - 10103390
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  10103308 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 10103390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 12902618 - 12902700
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  12902618 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 12902700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 24630059 - 24630141
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  24630059 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 24630141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 27381005 - 27381087
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  27381005 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 27381087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 27384975 - 27385057
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  27384975 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 27385057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 27600438 - 27600356
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  27600438 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 27600356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 30346669 - 30346751
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  30346669 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 30346751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 37379105 - 37379026
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  37379105 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgctaatg 37379026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 24645218 - 24645136
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||| ||||||||||    
T  24645218 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattggtaatgagatg 24645136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 24647161 - 24647079
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||| ||||||||||    
T  24647161 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattggtaatgagatg 24647079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 24647994 - 24647912
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||| ||||||||||    
T  24647994 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattggtaatgagatg 24647912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 31343984 - 31343902
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||  ||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||||| ||||||    
T  31343984 tatctatgagttgttaggtgtacttgatgatgtatatgttaagttgataagctgtcttttattcatgaattgataaagagatg 31343902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 10686272 - 10686335
Alignment:
Q  126 taaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  10686272 taaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 10686335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 21074644 - 21074697
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||| |||||||| || ||||||||||||| ||||||||||||||||||||||    
T  21074644 agttgctaagttgttttctattcatgaattgttaatgagatgcttggtggagaa 21074697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 37378978 - 37378909
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  37378978 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 37378909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 86; Significance: 5e-41; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 631757 - 631870
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||    
T  631757 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtattctattcatgagttgctaatgagatgcttggtggagaaatg 631856  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  631857 ttattacgaattaa 631870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 17052455 - 17052539
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  17052455 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttgataagttgtcttttattcatgaattgataatgagatg 17052539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 12423012 - 12422928
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  12423012 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 12422928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 22634936 - 22635020
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  22634936 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaatttataatgagatg 22635020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 15223614 - 15223531
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  15223614 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 15223531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 20158459 - 20158541
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20158459 tatctatgagttgttaagtgtacttgatgatgcttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 20158541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 20163910 - 20163992
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20163910 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 20163992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 24048394 - 24048474
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  24048394 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 24048474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 15533288 - 15533209
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  15533288 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 15533209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 36037021 - 36036942
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  36037021 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 36036942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 22635063 - 22635133
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22635063 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattacgaattaa 22635133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 13813842 - 13813926
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||| |||||||||||    
T  13813842 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgccttttgttcatgaatttataatgagatg 13813926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 13818330 - 13818414
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||  ||||||||||||||| |||||||||||    
T  13818330 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgcattttattcatgaatttataatgagatg 13818414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 23996976 - 23997059
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||||||||||||||||||||    
T  23996976 gttatctatgagttgttaaatgtacttgatgatggttatgt-aagttgataagttctcttttattcatgaattgataatgagatg 23997059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 18211673 - 18211594
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||| |||||    
T  18211673 gttatctatgagttgttaaatgtacttgatgatggttatgttgagttgataagttgtcttttattcatgaattgctaatg 18211594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 115 - 190
Target Start/End: Complemental strand, 30145847 - 30145772
Alignment:
Q  115 ctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||    
T  30145847 ctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatga 30145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 4562785 - 4562867
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  4562785 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 4562867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 5758467 - 5758549
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  5758467 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 5758549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 9555136 - 9555054
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  9555136 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 9555054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 14759003 - 14759085
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  14759003 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 14759085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 14955771 - 14955853
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  14955771 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 14955853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 17807121 - 17807039
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  17807121 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 17807039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 20161135 - 20161217
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  20161135 tatctatgagttgttaagtgtacttgataatgtttatgttaagttgataagttgtcttttattcaagaattgataatgagatg 20161217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 33740903 - 33740821
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  33740903 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 33740821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 28384920 - 28384841
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  28384920 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgctaatg 28384841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 12486338 - 12486256
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||| ||||||||    
T  12486338 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgatgatgagatg 12486256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 25688509 - 25688427
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||  ||||||||||||||||||    
T  25688509 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattagtgaattgataatgagatg 25688427  T

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Target: chr4; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 49549092 - 49549172
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgata-agttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||| |||||    
T  49549092 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataccgttgtcttttattcatgaattgctaatg 49549172  T

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Target: chr4; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 10711894 - 10711792
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||           |||||||||||||||||||||||    
T  10711894 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattc-----------atgagatgcttggtggagaaatg 10711806  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  10711805 ttattacgaattaa 10711792  T

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Target: chr4; HSP #30
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 10925664 - 10925562
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||           |||||||||||||||||||||||    
T  10925664 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattc-----------atgagatgcttggtggagaaatg 10925576  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  10925575 ttattacgaattaa 10925562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 136 - 206
Target Start/End: Complemental strand, 14047361 - 14047291
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||    
T  14047361 tgatgatgattatgttaagttgataagttgtattttattcatgagttgttaatgagatgcttggtggagaa 14047291  T

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Target: chr4; HSP #32
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 13813969 - 13814039
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||    
T  13813969 agttgataagttgtcttctattcatgagttgctaatgagatgtttggtggagaaatgttattacgaattaa 13814039  T

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Target: chr4; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 13818541 - 13818611
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||||| ||||||||| ||| |||||||||| ||||||||||||||||||| ||||||||    
T  13818541 agttgataagttgtcttctattcatgagttgctaatgagatgtttggtggagaaatgttattacgaattaa 13818611  T

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Target: chr4; HSP #34
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 17052582 - 17052652
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  17052582 agttgttaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 17052652  T

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Target: chr4; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 27532821 - 27532752
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||| ||| |||||||||    
T  27532821 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgccttctattcatga 27532752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 12422891 - 12422821
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||| ||||||||||||||| ||||||||    
T  12422891 agttgctaagttgtcttctattcatgagttgctaatgagatgcttgatggagaaatgttattacgaattaa 12422821  T

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Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 20164035 - 20164104
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  20164035 agttgctaagttgtcttctatt-atgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 20164104  T

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Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 30145725 - 30145656
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  30145725 agttgataagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 30145656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 190
Target Start/End: Complemental strand, 38107011 - 38106935
Alignment:
Q  114 tctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||||||||||||||| |  ||||||||| |||| |||||||||||| |||||||| |||||||| ||| ||||||    
T  38107011 tctatgagttgttaaatatgattgatgatgtttatgttaagttgataaattgtctttcattcatgagttgctaatga 38106935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 24048605 - 24048674
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||| | ||||||||    
T  24048605 agttgctaagttgtcttctattcatgagttgttaatgagatgcttggtggag-aatgttaatacgaattaa 24048674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 13818457 - 13818498
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  13818457 agttgataagttgtcttttatccatgaatttataatgagatg 13818498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 211
Target Start/End: Original strand, 20158584 - 20158641
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||| ||| ||||||| |||| |||| ||| |||||||||||||||||||||||||||    
T  20158584 agttgctaacttgtcttctatt-atgagttgctaatgagatgcttggtggagaaatgtt 20158641  T

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Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 20161291 - 20161329
Alignment:
Q  185 taatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  20161291 taatgagatgcttggtggaaaaatgttattacgaattaa 20161329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 28384793 - 28384724
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| | ||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  28384793 agttgctaagttgtcctctattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 28384724  T

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Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 190
Target Start/End: Original strand, 24048521 - 24048558
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatga 190  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  24048521 agttgctaagttgtcttttattcatgaattgttaatga 24048558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 112 - 214
Target Start/End: Complemental strand, 10834 - 10732
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    |||||| |||||||||| |||||||||||||| |||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  10834 tatctaagagttgttaagtgtacttgatgatggttatgttaagttgataagttgtattttattcatgaatagataatgagatgcttggtggagaaatgtt 10735  T
Q  212 att 214  Q
    |||    
T  10734 att 10732  T

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Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 22120601 - 22120685
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  22120601 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 22120685  T

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Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 15238127 - 15238211
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  15238127 gttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 15238211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 38146428 - 38146507
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  38146428 gttatctatgagttgttaaatgtacttgatgatgattatgttaagttgataagttgtcttttattcatgaattgctaatg 38146507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 111 - 194
Target Start/End: Complemental strand, 10751885 - 10751802
Alignment:
Q  111 ttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |||||||||||||    
T  10751885 ttatctatgagttgttaaatgtacttgatgatgtttatgttaagttgataagttgtcttttattcaagaaatgataatgagatg 10751802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 23113412 - 23113491
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| |||||    
T  23113412 gttatctatgagttgttaaatgtacttgatgatgattgtgttaagttgataagttgtcttttattcatgaattgctaatg 23113491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 28372091 - 28372170
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  28372091 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 28372170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 37600018 - 37600097
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  37600018 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 37600097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11219622 - 11219540
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  11219622 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatg 11219540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 18354864 - 18354782
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  18354864 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataaattgtcttttattcatgaattgataatgagatg 18354782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 24768574 - 24768656
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24768574 tatctatgagttgttaagtgtacctgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 24768656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 20912262 - 20912346
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  20912262 gttatctatgagttgttaagtgtacttgatgatgtgtatgttaagttgataagttgtcttttattcatgaaatgataatgagatg 20912346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 19510531 - 19510452
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||| |||||    
T  19510531 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataggttgtcttttattcatgaattgctaatg 19510452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 22339081 - 22339002
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||    
T  22339081 gttatctatgagttgttaaatgtacttgatgatggttatgttacgttgataagttgtcttttattcatgaattgctaatg 22339002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11224208 - 11224126
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  11224208 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagctgtcttttattcatgaattgataatgagatg 11224126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11228030 - 11227948
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||| |||||||||||||||||||||||||||||||    
T  11228030 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagctgtcttttattcatgaattgataatgagatg 11227948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 19474184 - 19474266
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  19474184 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 19474266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 20294581 - 20294499
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  20294581 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 20294499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 22749230 - 22749118
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||||||||||||||| | ||||||||| ||| |||| || |||||||||||| ||||    
T  22749230 gttatctatgagtggttaaatgtacttgatgatggttatgttaagttgataagttgtcctatattcatgagttgttaataaggtgcttggtggag-aatg 22749132  T
Q  210 ttattgcgaattaa 223  Q
    ||| | ||||||||    
T  22749131 ttaatacgaattaa 22749118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 22335551 - 22335472
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||||||||||||||||| |||||    
T  22335551 gttatctatgagttgttaaatgtatttgatgatggttatgttacgttgataagttgtcttttattcatgaattgctaatg 22335472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 41878661 - 41878740
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||||| |||||    
T  41878661 gttatctatgagttgttaaatgtacttgatgatagttatgttaagttgataagttgtcttttatttatgaattgctaatg 41878740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11226224 - 11226142
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||| |||||||||||||||||||||| ||||||||    
T  11226224 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagctgtcttttattcatgaattgatcatgagatg 11226142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11230020 - 11229938
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||| |||||||||||||||||||||| ||||||||    
T  11230020 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagctgtcttttattcatgaattgatcatgagatg 11229938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 22108459 - 22108542
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||  |  | ||||||||||||||||||||||||||||||||||||||||    
T  22108459 gttatctatgagttgttaaatgtacttgatgatg-ttacgtataattgataagttgtcttttattcatgaattgataatgagatg 22108542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 117 - 189
Target Start/End: Original strand, 33473948 - 33474020
Alignment:
Q  117 atgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |||||    
T  33473948 atgagttgttaaatgtacttgatgagggttatgttaagttgataagttgtcttttattcatgaattgttaatg 33474020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 36459617 - 36459533
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||   |||||||||  ||| ||||||||||    
T  36459617 gttatctatgagttgttaaatgtacttaatgatgattatgttaagttgataagttgttccttattcatgttttgctaatgagatg 36459533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 22108585 - 22108655
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  22108585 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 22108655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 40727411 - 40727492
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||| |||||||   |||||||||||||| |||| ||||||||||||||| |||||||||||||||||||||| ||||||    
T  40727411 tatctataagttgtttggtgtacttgatgatg-ttatgttaagttgataagttatcttttattcatgaattgataaagagatg 40727492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 22120728 - 22120798
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| |||||||  || ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  22120728 agttgctaagttgatttctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 22120798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 110 - 206
Target Start/End: Complemental strand, 9775009 - 9774914
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    |||||||||||||||||||||||||||||||||| |||  |  ||||| ||||||||| | ||||||||| ||| |||| || |||| |||||||||    
T  9775009 gttatctatgagttgttaaatgtacttgatgatg-ttacgtatagttgctaagttgtcctctattcatgagttgttaataaggtgctaggtggagaa 9774914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 33474068 - 33474137
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||| ||||||||||| ||| ||||||| |||||||||||| ||||||| | ||||||||    
T  33474068 agttgctaagttgtcctttattcatgagttgttaatgaggtgcttggtggag-aatgttaatacgaattaa 33474137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 19075958 - 19075911
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttg 157  Q
    |||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  19075958 gttacctatgagttgttaaatgtacttgatgagggttatgttaagttg 19075911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 73; Significance: 3e-33; HSPs: 4)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 25577 - 25661
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  25577 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgtgatg 25661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 25704 - 25774
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||  ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  25704 agttgttaagttgtctcctattcatgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 25774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 37669 - 37722
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaa 206  Q
    ||||| ||||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  37669 agttgttaagttgtcttctattcatgagttgttaatgagatgcttggtggagaa 37722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 37568 - 37621
Alignment:
Q  136 tgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||| |||| ||||||||||| ||||||||||||||||| |||| |||||    
T  37568 tgatgatggttatgttaagttgatacgttgtcttttattcatgtattgctaatg 37621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852 (Bit Score: 71; Significance: 4e-32; HSPs: 2)
Name: scaffold1852
Description:

Target: scaffold1852; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 832 - 914
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  832 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1852; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 159 - 223
Target Start/End: Original strand, 963 - 1026
Alignment:
Q  159 taagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||| |||| |||| ||| ||||| |||||||||||||||||||||||| ||||||||    
T  963 taagttgtcttctatt-atgatttgctaatgtgatgcttggtggagaaatgttattacgaattaa 1026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0410 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0410
Description:

Target: scaffold0410; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 14911 - 14829
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  14911 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 14829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 18892 - 18808
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||||||||||||    
T  18892 gttatctataagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcatttattcatgaattgataatgagatg 18808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 18765 - 18695
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| |||||| ||||||||||||| ||||||||| ||||||||    
T  18765 agttgctaagttgtcttctattcatgagttgctaatgaaatgcttggtggaggaatgttattacgaattaa 18695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 21349 - 21454
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatg 209  Q
    |||||||||||||||||||||||||||||||||| |||| |||||        ||||||||||||||||||||| |||||||||||||||||||||||||    
T  21349 gttatctatgagttgttaaatgtacttgatgatggttatgttaag--------ttgtcttttattcatgaattgctaatgagatgcttggtggagaaatg 21440  T
Q  210 ttattgcgaattaa 223  Q
    ||||| ||||||||    
T  21441 ttattacgaattaa 21454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 194
Target Start/End: Original strand, 8749 - 8833
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||| |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8749 gttatctacgagttgttaaatgtacatgatgatggttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 8833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 8876 - 8946
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||    
T  8876 agttgctaagttgtcttctattcatgagttgctaatgagatgcttggtggaaaaatgttattacgaattaa 8946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 69; Significance: 7e-31; HSPs: 4)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 34006 - 33922
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  34006 gttatctatgagttgttaaatgtacttgatgatcgttatgttaagttgataagttgtcttttattcatgaattgctaatgagatg 33922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 110 - 185
Target Start/End: Complemental strand, 28541 - 28466
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgat 185  Q
    |||||||||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||    
T  28541 gttatctatgagttgttaaatgtacttgatgatcgttatgttaagttgataagttgtcttttattcatgaattgat 28466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 28453 - 28401
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggaga 205  Q
    ||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  28453 agttgctaagttgtcttatatccatgagttgttaatgagatgcttggtggaga 28401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 33879 - 33827
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggaga 205  Q
    ||||| ||||||||||| ||| ||||| ||| |||||||||||||||||||||    
T  33879 agttgctaagttgtcttatatccatgagttgttaatgagatgcttggtggaga 33827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1427 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold1427
Description:

Target: scaffold1427; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 269 - 190
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  269 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 10831 - 10910
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  10831 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 10910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 112 - 223
Target Start/End: Original strand, 15586 - 15697
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgtt 211  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||||||| ||| || | || | ||    
T  15586 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattcatgaattgataatgagatgtttgatgaataagtatt 15685  T
Q  212 attgcgaattaa 223  Q
    ||| ||||||||    
T  15686 attacgaattaa 15697  T

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Target: scaffold0026 (Bit Score: 68; Significance: 3e-30; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 109670 - 109591
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  109670 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 109591  T

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Target: scaffold0012 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 224152 - 224231
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  224152 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaattgctaatg 224231  T

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Target: scaffold0012; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 223
Target Start/End: Original strand, 224279 - 224348
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| ||||||||| ||| ||||||| |||||||| ||| ||||||| | ||||||||    
T  224279 agttgctaagttgtcttctattcatgagttgttaatgaggtgcttggtagag-aatgttaatacgaattaa 224348  T

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Target: scaffold0166 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 11071 - 11153
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| ||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11071 tatctatgagttgttaagtgtacctgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatg 11153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 110 - 188
Target Start/End: Original strand, 37212 - 37290
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| |||||||    
T  37212 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttttattcatgaaatgataat 37290  T

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Target: scaffold0003 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 70821 - 70740
Alignment:
Q  113 atctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  70821 atctatgagttgttaagtgtacttgatgatgtttatgttaagttgataggttgtcttttattcatgaattgataatgagatg 70740  T

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Target: scaffold0003; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 159 - 223
Target Start/End: Complemental strand, 70691 - 70628
Alignment:
Q  159 taagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||| |||| |||| ||| |||||||||||||||||||||||||||||| ||||||||    
T  70691 taagttgtcttctatt-atgagttgctaatgagatgcttggtggagaaatgttattacgaattaa 70628  T

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Target: scaffold1873 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold1873
Description:

Target: scaffold1873; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 633 - 563
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  633 agttgataagttgtcttttattcatgaatcgataatgagatgcttggtggagaaatgttattacgaattaa 563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0486 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0486
Description:

Target: scaffold0486; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 8644 - 8562
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||||    
T  8644 tatctatgagttgttaagtgtacttgatgatgtttatgttaagttaataagttgtcttttattcatgaaatgataatgagatg 8562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0372 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0372
Description:

Target: scaffold0372; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 6332 - 6414
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  6332 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 6414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Complemental strand, 11118 - 11036
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  11118 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 11036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 60337 - 60419
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  60337 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 60419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 113 - 194
Target Start/End: Complemental strand, 11843 - 11762
Alignment:
Q  113 atctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||| |||||||||||||| |||| ||||||||||| |||||||||||| ||||||||||||||||||||    
T  11843 atctatgagttgttaagtgtacttgatgatgcttatgttaagttgatatgttgtcttttatacatgaattgataatgagatg 11762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0842 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0842
Description:

Target: scaffold0842; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Complemental strand, 5311 - 5232
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||||||||||| || |||||    
T  5311 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgtctattattcatgaaatgctaatg 5232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 3526 - 3605
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatg 189  Q
    ||||| |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||| |||||    
T  3526 gttatttatgagttgttaaatgtacttgatgattgttatgttaagttgataagttgtcttttattcatgaattgctaatg 3605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 5546 - 5653
Alignment:
Q  116 tatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattg 215  Q
    |||||||| |||  |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||| || | || |||||||     
T  5546 tatgagttcttaggtgtacttgatgatgtttatgttaagttgataagttgtcttttattcatgaattgataatgagatgtttgatgaataattgttatta 5645  T
Q  216 cgaattaa 223  Q
     |||||||    
T  5646 tgaattaa 5653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 34139 - 34221
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| |||||||||||||| |||| |||| |||||||||||||||||||| |||||||||| ||||||||    
T  34139 tatctatgagttgttaagtgtacttgatgatgtttatgttaaattgataagttgtcttttattaatgaattgatgatgagatg 34221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 59; Significance: 6e-25; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 112 - 194
Target Start/End: Original strand, 68567 - 68649
Alignment:
Q  112 tatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    ||||||||||||||||| ||||||||||| || |||| |||| |||||||||||||||||||| |||||||||||||||||||    
T  68567 tatctatgagttgttaagtgtacttgatggtgtttatgttaaattgataagttgtcttttattaatgaattgataatgagatg 68649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0599 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0599
Description:

Target: scaffold0599; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 4190 - 4106
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||   ||||||||| |||| ||||||||||    
T  4190 gttatctatgagttgttaaatgtacttgatgatggttatgttaagttgataagttgttccttattcatgtattgctaatgagatg 4106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0380 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Complemental strand, 4043 - 3974
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  4043 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 3974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 23947 - 24016
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  23947 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 24016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 24013 - 24049
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  24013 atgagatgcttggtggagaaatgttattacaaattaa 24049  T

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Target: scaffold0029 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 62849 - 62918
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||| |||||||||    
T  62849 gttatctaggagttgttaaatgtacttgatgatggttatgttaagttgataagttgtcttctattcatga 62918  T

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Target: scaffold0029; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 62915 - 62951
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  62915 atgagatgcttggtggagaaatgttattacaaattaa 62951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 116 - 188
Target Start/End: Complemental strand, 5888 - 5817
Alignment:
Q  116 tatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataat 188  Q
    ||||||||||||| |||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||    
T  5888 tatgagttgttaagtgtacttgatgatgtttatgttaagttgat-agttgtcttttattcatgaattgataat 5817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 153 - 223
Target Start/End: Complemental strand, 5767 - 5698
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    ||||| ||||||||||| |||| |||| ||| |||||| ||||||||||||||||||||||| ||||||||    
T  5767 agttgctaagttgtcttctatt-atgagttgctaatgaaatgcttggtggagaaatgttattacgaattaa 5698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 110 - 179
Target Start/End: Original strand, 37207 - 37276
Alignment:
Q  110 gttatctatgagttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatga 179  Q
    |||||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  37207 gttatctaggagttgttaaatgtacttgatgatggttatgttaagtcgataagttgtcttctattcatga 37276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Original strand, 37273 - 37309
Alignment:
Q  187 atgagatgcttggtggagaaatgttattgcgaattaa 223  Q
    |||||||||||||||||||||||||||| | ||||||    
T  37273 atgagatgcttggtggagaaatgttattacaaattaa 37309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 115390 - 115438
Alignment:
Q  145 ttatattaagttgataagttgtcttttattcatgaattgataatgagatg 194  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  115390 ttatgttaagttgata-gttgtcttttattcatgaattgataatgagatg 115438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 115481 - 115541
Alignment:
Q  153 agttgataagttgtcttttattcatgaattgataatgagatgcttggtggagaaatgttatt 214  Q
    ||||| ||||||||||| |||| |||| ||| |||||||||| |||||||||||||||||||    
T  115481 agttgctaagttgtcttctatt-atgagttgctaatgagatgtttggtggagaaatgttatt 115541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 198
Target Start/End: Original strand, 163588 - 163665
Alignment:
Q  121 gttgttaaatgtacttgatgatgattatattaagttgataagttgtcttttattcatgaattgataatgagatgcttg 198  Q
    ||||||||||||||||||||| | |||| |||||||||||| ||||   |||||||||  ||| ||||||||||||||    
T  163588 gttgttaaatgtacttgatgagggttatgttaagttgataacttgttccttattcatgttttggtaatgagatgcttg 163665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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