View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4860_low_2 (Length: 452)
Name: NF4860_low_2
Description: NF4860
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4860_low_2 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold1476 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 421; Significance: 0; HSPs: 28)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 421; E-Value: 0
Query Start/End: Original strand, 13 - 437
Target Start/End: Original strand, 5098087 - 5098511
Alignment:
| Q |
13 |
atacttgtcagtaaaactttgattttatctctattcatacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagatt |
112 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5098087 |
atacttgtcagtaaaactttgattttatctctattcatacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagatt |
5098186 |
T |
|
| Q |
113 |
ggttaacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaac |
212 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5098187 |
ggttaacctttcattctgaaggttcttcggtaacttttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaac |
5098286 |
T |
|
| Q |
213 |
cccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctccttt |
312 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5098287 |
cccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctccttt |
5098386 |
T |
|
| Q |
313 |
gaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacag |
412 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5098387 |
gaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacag |
5098486 |
T |
|
| Q |
413 |
cagtttatctggtatatgatgaaca |
437 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
5098487 |
cagtttatctggtatatgatgaaca |
5098511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 52 - 436
Target Start/End: Complemental strand, 5101198 - 5100814
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||| ||| ||||| | || |||| |||||||||||| |||| |||||||| ||||||||||||||| ||| ||||||||||| ||||| || |
|
|
| T |
5101198 |
cagaatatagatgtcaatagtagtggtggttgtttgcttcctggtgatagttatccaaattggttaacctttctttcggaaggttcttctgtaactttag |
5101099 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
|||| || ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||| |
|
|
| T |
5101098 |
aagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataacataacatcaagtggccttaaaaatgtgtt |
5100999 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
5100998 |
agtgaaaaattacacaaaggccaccattcagctctataagagcgaggcattagtctcctttgaagatgaggaggctctgagggtagtatcaagtatagaa |
5100899 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
5100898 |
cccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtatacgatgaac |
5100814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 52 - 436
Target Start/End: Complemental strand, 5136299 - 5135915
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||| ||| ||||| | || |||| |||||||||||| |||| |||||||| ||||||||||||||| ||| ||||||||||| ||||| || |
|
|
| T |
5136299 |
cagaatatagatgtcaatagaagtggtggttgtttgcttcctggtgatagttatccaaattggttaacctttctttcggaaggttcttctgtaactttag |
5136200 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
|||| || ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||| |
|
|
| T |
5136199 |
aagtccctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataacataacatcaagtggccttaaaaatgtgtt |
5136100 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
|| ||||| ||||||||||||||||||||||||| ||||| || ||||| | ||||||||||||||||||| | ||||||| |||||||||||||| |
|
|
| T |
5136099 |
ggtaaaaaattacacaaaggccaccattcagctctacaagagcgaagcattagcctcctttgaagatgaggaggctctgagggtagtatcaagtatagaa |
5136000 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|| |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
|
|
| T |
5135999 |
cccggtaacaaagtggaggtcgttgttgtttttgagaacagtttcattgtgaaaaagacagcagtttatctcgtatacgatgaac |
5135915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 52 - 436
Target Start/End: Complemental strand, 5156393 - 5156009
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||||| || |||| |||| |||||||| |||||||||||| | |||||||||||||||| || | ||| |
|
|
| T |
5156393 |
cagaatatggatggcaatgggagtggtggttgtttcctccccagtgatagttatccaaattggttaacctataattctgaaggttcttctgtgaaatttg |
5156294 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
||||||| ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||| ||| | | || |||||||||||||||||||| |
|
|
| T |
5156293 |
aagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatacttcaaccccagataatgtaacatgtagtggccttaaaaacatgtt |
5156194 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
| ||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||| | ||||||||| |||||||| ||||| |
|
|
| T |
5156193 |
attgaaaaattacacaaaggccaccattcagctttataagagtgaggcattggcctcctttgaagatgaagaggggcagagggtagtatcaagtctagaa |
5156094 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
||||||||||||||||||||| | |||||||||||| | |||||||||||| |||||| |||||||||| ||||| ||||||| |
|
|
| T |
5156093 |
cctggtaacaaagtggaggtccattttgttttcgagattaatttcattgtgaagaagacaacagtttatcttgtatacgatgaac |
5156009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 52 - 436
Target Start/End: Original strand, 5351315 - 5351699
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||||||||||||| |||| ||| |||||||||||| |||| |||||||| |||||||||||||| ||| |||| |||||| || | ||| |
|
|
| T |
5351315 |
cagaatatggatctcaataggagtagtggttgtttgcttcctggtgatagttatccaaattggttaacctttatttcagaagtttcttctgtgaaatttg |
5351414 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| |||||||||||||| ||||||||||||||||| | |||| | | |||||||||||||||||||||||| |
|
|
| T |
5351415 |
aagttcctcaagtggaagggcgtgacttgaagacaatgatgtgcatagtctatacttcaacccctggtaacgtaacatcaagtggccttaaaaacatgtt |
5351514 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
||||||||| |||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| | |||||| || |||||||||||||| |
|
|
| T |
5351515 |
agtgaaaaattacacaaaggccaccattcggctctataagagtgaggcattagtttcctttgaagatgaggaggggcagaggttagtatcaagtatagaa |
5351614 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|| |||||||||||||||||||| ||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||| |
|
|
| T |
5351615 |
cccagtaacaaagtggaggtcatttttgttttcgagaatgattgcattgtgaaaaagacagtagtttatctcgtatatgatgaac |
5351699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 52 - 436
Target Start/End: Original strand, 5426815 - 5427199
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||||||||||||| |||| ||| || ||||||||| ||| |||||||| | |||||||||| | ||||||||||||||| ||||| |||| |
|
|
| T |
5426815 |
cagaatatggatctcaataggagtggtagttttttgcttcctggtgacagttatccaaagtggttaacctatagttctgaaggttcttctgtaacttttc |
5426914 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
||||||| ||||||||||| |||| | |||| ||||| |||||||| ||||||||||||||||| | ||| | ||||||||||||||||||| |||||| |
|
|
| T |
5426915 |
aagttccacaagtggaagggcgtaacctgaagacaattatgtgcatagtctatacttcaacccctggtaatgtaatatcaagtggccttaaaatcatgtt |
5427014 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
| ||||||| |||||||||||| ||||||||| ||||||||||||| ||| || || ||||||||||||||| | | || ||| |||||||||||||| |
|
|
| T |
5427015 |
attgaaaaattacacaaaggccatcattcagctttataagagtgaggtattagtgtcatttgaagatgaggagggggaaagagtagtatcaagtatagaa |
5427114 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||||||| |||||||| || ||||||| |||||||||||| |||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
5427115 |
cctggtaacaaaatggaggtcgtttttgtttttgagaacagtttcgttgtgacgaagacagtagtttatctcgtatatgatgaac |
5427199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 51 - 433
Target Start/End: Complemental strand, 5181155 - 5180773
Alignment:
| Q |
51 |
acagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaaccttt |
150 |
Q |
| |
|
||||||||||||| |||||| || |||| || ||| || |||| |||| |||||||| |||||||||||||| |||||||||||||||| ||||| ||| |
|
|
| T |
5181155 |
acagaatatggatgtcaatgaaagtggtggttatttcctccccagtgatagttatccaaattggttaacctttaattctgaaggttcttctgtaactttt |
5181056 |
T |
|
| Q |
151 |
caagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgt |
250 |
Q |
| |
|
|||| || |||||||| |||| |||||| ||||||||| | ||||||||| |||||| ||| ||| | | ||||||||||||||||||||||| |
|
|
| T |
5181055 |
gaagtccctttggtggaaggacgtaacttgaagacaatgatgctcgttgtctataattcaactccacataatgtaacatcaagtggccttaaaaacatgt |
5180956 |
T |
|
| Q |
251 |
tagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtataga |
350 |
Q |
| |
|
|||| ||||| |||||||||| ||||||||||||||||||||||| | || ||||| ||||||||||| ||| | ||||||||| ||||||| ||||| |
|
|
| T |
5180955 |
tagttaaaaattacacaaaggctaccattcagctctataagagtgatacgttagtctcttttgaagatgaagagggtcagagggtagtatcaagcataga |
5180856 |
T |
|
| Q |
351 |
acctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatg |
433 |
Q |
| |
|
||| |||||||||||||||||| || ||||||| ||||| |||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
5180855 |
acccggtaacaaagtggaggtcgtttttgtttttgagaaaagtttcattgtgaagaagacagcaatttatctggtatatgatg |
5180773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 52 - 436
Target Start/End: Original strand, 5372012 - 5372396
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||||||| ||| ||||| |||| |||||| || |||| |||| |||||||| |||||||||||| | ||||||||||||||| || | ||| |
|
|
| T |
5372012 |
cagaatatggatggcaacgggagtggtggttgtttcctccccaatgatagttatccaaattggttaacctatagttctgaaggttcttctgtgaaatttg |
5372111 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
||||||| ||||||||||| |||| |||||| ||||| ||||||| ||||| ||||||||| || | ||| | | ||| |||||||||||||||||||| |
|
|
| T |
5372112 |
aagttcctcaagtggaagggcgtaacttgaagacaattatgtgcaatgtctgtacttcaactccggataatgtaacatctagtggccttaaaaacatgtt |
5372211 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaa |
351 |
Q |
| |
|
| ||||||| |||||||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| ||| | ||||||||| |||||||| ||||| |
|
|
| T |
5372212 |
attgaaaaattacacaaaggccaccattcagctttataagagtgaagcattagtctcctttgaagatgaagaggggcagagggtagtatcaagtctagaa |
5372311 |
T |
|
| Q |
352 |
cctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||||||||||||| || | ||||| ||||||| |||||||||||| |||||| || ||||||| ||||| ||||||| |
|
|
| T |
5372312 |
cctggtaacaaagtggagatccattttgttctcgagaatgatttcattgtgaagaagacaacaatttatctcgtatacgatgaac |
5372396 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 51 - 433
Target Start/End: Original strand, 5438925 - 5439307
Alignment:
| Q |
51 |
acagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaaccttt |
150 |
Q |
| |
|
||||||||||||| |||||||||| | || | |||| || ||| |||| |||||||| |||||||||||||| |||||||||||||||| ||||| ||| |
|
|
| T |
5438925 |
acagaatatggatgtcaatgggagtgatggtcgttttctccccggtgatagttatccaaattggttaacctttaattctgaaggttcttctgtaactttt |
5439024 |
T |
|
| Q |
151 |
caagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgt |
250 |
Q |
| |
|
||||| || ||||||||||| |||| |||| || ||||||||||||||||| ||||||| || | |||||| | |||| | |||||| ||| | | |
|
|
| T |
5439025 |
caagtccctcaagtggaagggcgtaatttgatgtcattgatgtgcattgtctattcttcaactccggataacataacatcagatagccttataaatgtat |
5439124 |
T |
|
| Q |
251 |
tagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtataga |
350 |
Q |
| |
|
| |||| ||| |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||| | |||||| ||| |||||||||||| |
|
|
| T |
5439125 |
tggtgataaatcacacaaaggccaccattcagctctataagagtgaggctgtagtctcttttgaagatgaggaggggcagaggttaaaatcaagtataga |
5439224 |
T |
|
| Q |
351 |
acctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatg |
433 |
Q |
| |
|
||||||||||||||||||||| || |||||||| |||| |||||||| ||||||||||||| |||||| |||||||||| |
|
|
| T |
5439225 |
acctggtaacaaagtggaggttgtttttgttttcaagaatgatttcattgccaaaaagacagcagcttatctcgtatatgatg |
5439307 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 53 - 432
Target Start/End: Original strand, 5397962 - 5398341
Alignment:
| Q |
53 |
agaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttca |
152 |
Q |
| |
|
||||||| ||| |||||||| |||| |||||| || |||| ||| |||||||| |||||||||| | | |||||| |||||||| |||| ||| | |
|
|
| T |
5397962 |
agaatatcgatggcaatgggaatggtggttgtttcctccccagcgatagttatccaaattggttaacttatagttctgagggttcttctttaacttttga |
5398061 |
T |
|
| Q |
153 |
agttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtta |
252 |
Q |
| |
|
|||||| || |||||||| |||| |||||| ||||||||||||||||| ||||||||||| | | ||| | | ||| ||||||||||||||||||||| |
|
|
| T |
5398062 |
agttcctcatgtggaagggcgtaacttgaagacaatgatgtgcattgtgtatacttcaactctggataatgtaacatctagtggccttaaaaacatgtta |
5398161 |
T |
|
| Q |
253 |
gtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaac |
352 |
Q |
| |
|
|||| ||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||| ||| | || |||||| ||||||||||||||| |
|
|
| T |
5398162 |
gtgataaattacacaaaggccaccattcagctctataagagtgaggcgttattctcctttgaacatgaagaggggcaaagggtagtatcaagtatagaac |
5398261 |
T |
|
| Q |
353 |
ctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
||||||||||||| ||||| | ||||||||||||| |||||||||||| |||||| |||||||||| ||||||||| |
|
|
| T |
5398262 |
ctggtaacaaagttgaggttgtctttgttttcgagaatgatttcattgtgaagaagacaacagtttatcttgtatatgat |
5398341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 76 - 433
Target Start/End: Original strand, 5448548 - 5448905
Alignment:
| Q |
76 |
ggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgta |
175 |
Q |
| |
|
|||| |||||| |||||| |||| ||||||||||||||||||||||| |||||||||||||||| ||||| ||| |||| || |||||||||| ||| |
|
|
| T |
5448548 |
ggtggttgtttccttcccggtgatagttatccagattggttaacctttaattctgaaggttcttctgtaacttttgaagtccctcaagtggaagagcgtc |
5448647 |
T |
|
| Q |
176 |
gcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccac |
275 |
Q |
| |
|
|||| || |||||||||||||||||||||||||||||| ||| | | ||| |||||||||||||| |||| |||||||| |||||||||| || |
|
|
| T |
5448648 |
aattgacgtcattgatgtgcattgtctatacttcaaccccagataatgtaacatctagtggccttaaaaatgtgttggtgaaaaattacacaaaggctac |
5448747 |
T |
|
| Q |
276 |
cattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcatt |
375 |
Q |
| |
|
|||||| |||||||||||||| |||| || |||||||||||| ||||| | |||||| || |||||||||||||||| || |||||||||||| || || |
|
|
| T |
5448748 |
cattcaaatctataagagtgagacattagtttcctttgaagataaggaggggcagaggttagtatcaagtatagaacccggaaacaaagtggagatcgtt |
5448847 |
T |
|
| Q |
376 |
gttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatg |
433 |
Q |
| |
|
||||||||||||| ||||| |||| | ||||||| ||| |||||||||||||||| |
|
|
| T |
5448848 |
tttgttttcgagaatgatttcactgtggagaagacagtagtatatctggtatatgatg |
5448905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 50 - 433
Target Start/End: Complemental strand, 5283594 - 5283223
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||||| ||||| |||| ||||||||||||||||| |||| |||||||||||||||| |||||| ||| ||||||||||| ||||| || |
|
|
| T |
5283594 |
tacagaatatggatgtcaataggagtggtgattgtttgcttcctggtgatagttatccagattggttgacctttagttcagaaggttcttctgtaacttt |
5283495 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatg |
249 |
Q |
| |
|
| | || || ||||| ||||| ||| |||||| ||||||||||||||||||||||||||||||| | ||| | | || ||| |||| || |
|
|
| T |
5283494 |
tgatgtccctcaagttgaagggtgtaacttgaagtcaatgatgtgcattgtctatacttcaacccctggtaa---------acatagctttagaaacgtg |
5283404 |
T |
|
| Q |
250 |
ttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatag |
349 |
Q |
| |
|
||||||||||| |||||||||||||||| || |||||||| ||||| ||||| || ||||||| ||||| | |||||||||||||||||||| | |
|
|
| T |
5283403 |
ttagtgaaaaattacacaaaggccaccatccaactctataatagtgatgcattttcctactttgaaaatgagtgg---cagagggtaatatcaagtatcg |
5283307 |
T |
|
| Q |
350 |
aacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatg |
433 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
5283306 |
aaccaggtaacaaagtggaggtcatatttgtttttgaaaacagtttcattgtgaagaagacagcaatttatctggtatatgatg |
5283223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 436
Target Start/End: Original strand, 5177649 - 5178038
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||||| |||||| | |||| ||||||| |||| | |||| ||| |||||||||||||||||| ||| |||||||||||||||| || |
|
|
| T |
5177649 |
tacagaatatggatgagaatgggtgtggtggttgtttgtttcctagtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtt |
5177748 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatg---tgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaac |
246 |
Q |
| |
|
| |||| || ||||||||||| | | || || ||||||||| ||||||| |||| ||||||||| | ||| || | ||||| ||||||| |||| |
|
|
| T |
5177749 |
tgaagtccctcaagtggaagggtgcactttaaagacaatgatgatatgcattgactattcttcaaccctggataatataacatcaaatggccttgcaaac |
5177848 |
T |
|
| Q |
247 |
atgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagta |
346 |
Q |
| |
|
|||| || || || ||||||| |||||||||||||| |||||||| |||||||| | ||||||||||||||| ||| | ||||| ||| ||||||||| |
|
|
| T |
5177849 |
ttgttggttaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttgaagatgaagagggtcagagagtagtatcaagta |
5177948 |
T |
|
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||| || ||| |||||||||| ||||||||||||| |
|
|
| T |
5177949 |
tagaaccttgtaacaaagtggaggttgttgttgtttttgagaacggtttcattgtgaagaaaacaacagtttatctcgtatatgatgaac |
5178038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 50 - 436
Target Start/End: Original strand, 5279474 - 5279863
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||||| |||||| | |||| ||||||| |||| | |||| ||| |||||||||||||||||| ||| |||||||||||||||| || |
|
|
| T |
5279474 |
tacagaatatggatgagaatgggtgtggtggttgtttgtttccaagtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtt |
5279573 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatg---tgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaac |
246 |
Q |
| |
|
| |||| || ||||||||||| | | || || ||| ||||| ||||||| |||| ||||||||| | ||| || | ||||| ||||||| |||| |
|
|
| T |
5279574 |
tgaagtccctcaagtggaagggtgcactttaaagacattgatgatatgcattgactattcttcaaccctggataatataacatcaaatggccttgcaaac |
5279673 |
T |
|
| Q |
247 |
atgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagta |
346 |
Q |
| |
|
|||| ||||| || ||||||| |||||||||||||| |||||||| |||||||| | ||||||||||||||| ||| | ||||| ||| ||||||||| |
|
|
| T |
5279674 |
ttgttggtgaagaattacacaaaagccaccattcagctttataagagagaggcattagcctcctttgaagatgaagagggtcagagagtagtatcaagta |
5279773 |
T |
|
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||| |||||||||||||||| |||||||||| |||||| ||||||||||||| || ||| |||||||||| ||||||||||||| |
|
|
| T |
5279774 |
tagaaccttgtaacaaagtggaggttgttgttgtttttgagaacggtttcattgtgaagaaaacaacagtttatctcgtatatgatgaac |
5279863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 51 - 436
Target Start/End: Complemental strand, 5242896 - 5242508
Alignment:
| Q |
51 |
acagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaaccttt |
150 |
Q |
| |
|
||||||||||||| |||||||| |||| |||||||||||| ||| |||||||||||||||||||||| |||||||||||||||| || || ||| |
|
|
| T |
5242896 |
acagaatatggatgagaatgggagtggtggttgtttgcttcctggtgacagttatccagattggttaaccttcgattctgaaggttcttctgttactttt |
5242797 |
T |
|
| Q |
151 |
caagttccccaagtggaaggccgtagcttgaaaacaat---gatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaaca |
247 |
Q |
| |
|
|||| || ||||||||||| || | ||||| ||||| ||| || ||||||| ||||||| | | || || | ||| ||||||| |||| |
|
|
| T |
5242796 |
gaagtccctcaagtggaagggcgaatgttgaagacaataacgatatgtgctgtctattcttcaacttcggatagtataacatctgatggccttggaaact |
5242697 |
T |
|
| Q |
248 |
tgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtat |
347 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| ||||| |||||| | | | |||||||||||||| || | | ||| ||| ||| |||||| |
|
|
| T |
5242696 |
tgttagtgaaaaattacacaaaggccaccattcagctctacaagagagaggcagtagccgcctttgaagatgagaaggggctgagagtagtatgaagtat |
5242597 |
T |
|
| Q |
348 |
agaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||||||| ||||||||| ||||||||||||| |
|
|
| T |
5242596 |
agaacctggtaacaaagtggaggtcgtttttgtttttgagaacagtttcattgtgaagaagacagtagtttatctcgtatatgatgaac |
5242508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 51 - 432
Target Start/End: Complemental strand, 5353244 - 5352863
Alignment:
| Q |
51 |
acagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaaccttt |
150 |
Q |
| |
|
||||||||||||| | ||||| || |||| |||||| || || |||| |||||||| ||||||||||||| | |||||||||||||| ||||| ||| |
|
|
| T |
5353244 |
acagaatatggatgttaatggaagtggtggttgtttcctccctggtgatagttatccaaattggttaaccttctactctgaaggttcttctgtaactttt |
5353145 |
T |
|
| Q |
151 |
caagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgt |
250 |
Q |
| |
|
|| || || | |||||||| |||| |||||| ||||||||||||||| ||||||| ||||||| | |||||| | ||| |||||||||||| ||| |
|
|
| T |
5353144 |
catgtccctctggtggaagggcgtaacttgaagacaatgatgtgcattatctatacgtcaacccaaaataacataacttcatatggccttaaaaatgtgt |
5353045 |
T |
|
| Q |
251 |
tagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtataga |
350 |
Q |
| |
|
| | ||||| |||||||||| ||||||||||| |||||||| |||||||| | |||||||||||||||||| | ||||| ||| |||||||||| || |
|
|
| T |
5353044 |
tgctaaaaaattacacaaaggctaccattcagctttataagagagaggcattaatttcctttgaagatgaggaggggcagagagtagtatcaagtatgga |
5352945 |
T |
|
| Q |
351 |
acctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
|||||| ||||||| ||||| || ||||||||||||| ||||||| ||||| |||||| || ||||||||||||||||| |
|
|
| T |
5352944 |
tcctggtgacaaagtagaggtggttattgttttcgagaattgtttcatcgtgaagaagacaacaatttatctggtatatgat |
5352863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 50 - 436
Target Start/End: Complemental strand, 5689288 - 5688899
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||||| |||||| | |||| ||||||| |||| | |||| ||| |||||||||||||||||| ||| |||||||||||||||| || |
|
|
| T |
5689288 |
tacagaatatggatgagaatgggtgtggtggttgtttgtttcctagtgatagttgtccagattggttaaccttcaattgcgaaggttcttcggtaatgtt |
5689189 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatg---tgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaac |
246 |
Q |
| |
|
| |||| || ||||||||||| || | || || ||| ||||| ||||| | |||| || |||||| | |||||| | ||||| ||||||| |||| |
|
|
| T |
5689188 |
tgaagtccctcaagtggaagggcgcactttaaagacattgatgatatgcatcgactattctacaaccctggataacataacatcaaatggccttgcaaac |
5689089 |
T |
|
| Q |
247 |
atgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagta |
346 |
Q |
| |
|
|||| ||||| || ||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||| ||| | ||||| ||| ||||||||| |
|
|
| T |
5689088 |
ttgttggtgaagaattacacaaaagccaccattcagctttataagagcgaggcattagtctcctttgaagatgaagagggacagagagtagtatcaagta |
5688989 |
T |
|
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||| |||||||||||||||| || |||||| |||||| ||||||||||||| || ||| |||||||||| ||||||||||||| |
|
|
| T |
5688988 |
tagaaccttgtaacaaagtggaggttgtttctgtttttgagaacggtttcattgtgaagaaaacaacagtttatctcgtatatgatgaac |
5688899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 52 - 389
Target Start/End: Original strand, 5334097 - 5334437
Alignment:
| Q |
52 |
cagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttc |
151 |
Q |
| |
|
|||||||||||| ||||||||| |||| |||||| | ||| |||| |||||||| ||||||||| || | |||||||||||||||| || | ||| |
|
|
| T |
5334097 |
cagaatatggatggcaatgggagtggtggttgtttcc---ccagtgatagttatccaaattggttaagctataattctgaaggttcttctgtgaaatttg |
5334193 |
T |
|
| Q |
152 |
aagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgtt |
251 |
Q |
| |
|
||||||| ||||||||||| ||| |||||| ||||||||||||||| |||||| ||||||||||| ||| | | |||||||||||||||||||||||| |
|
|
| T |
5334194 |
aagttcctcaagtggaagggggtaacttgaagacaatgatgtgcattttctataattcaaccccagataatgt-acatcaagtggccttaaaaacatgtt |
5334292 |
T |
|
| Q |
252 |
agtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattgg-------tctcctttgaagatgaggagagccagagggtaatatcaag |
344 |
Q |
| |
|
||||| ||| ||||||||||||||||||| |||||||||||||||||||| | || ||| ||||||| ||| | |||||||| ||||| | |
|
|
| T |
5334293 |
agtgataaattacacaaaggccaccattcaactctataagagtgaggcattagacttctaacttcttcaaagatgaagaggggtagagggtagtatcatg |
5334392 |
T |
|
| Q |
345 |
tatagaacctggtaacaaagtggaggtcattgttgttttcgagaa |
389 |
Q |
| |
|
| |||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
5334393 |
tctagaacctggtaacaaagtggaggtcgtttttgttttcgagaa |
5334437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 116 - 436
Target Start/End: Original strand, 2938888 - 2939214
Alignment:
| Q |
116 |
taacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctata--cttcaacc |
213 |
Q |
| |
|
|||||| | |||||||| ||||||| || | ||| ||||||| ||||||||||| |||| |||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
2938888 |
taacctataattctgaatgttcttctgtgaaatttgaagttcctcaagtggaagggcgtaacttgaagacaatgatgtgcattgtctatatacttaaacc |
2938987 |
T |
|
| Q |
214 |
ccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttg |
313 |
Q |
| |
|
|||| ||| | | ||| |||||||||||||||||| || ||||||| | | |||||||||||||||||||||||||||||||||||| |||||||| | |
|
|
| T |
2938988 |
ccagataatgtaacatctagtggccttaaaaacatgatattgaaaaattatataaaggccaccattcagctctataagagtgaggcattagtctccttcg |
2939087 |
T |
|
| Q |
314 |
aa----gatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaaga |
409 |
Q |
| |
|
|| ||||| || | ||||||||| |||||||| || ||||||||||||||||||||||| | ||||| ||||||| || ||||||||| ||| |
|
|
| T |
2939088 |
aagatggatgaagaagggcagagggtagtatcaagtctataacctggtaacaaagtggaggtccattttgttatcgagaatgattgcattgtgaagaagg |
2939187 |
T |
|
| Q |
410 |
cagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|| || ||||||| ||||||||||||| |
|
|
| T |
2939188 |
caacaatttatctcgtatatgatgaac |
2939214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 51 - 435
Target Start/End: Original strand, 5345940 - 5346327
Alignment:
| Q |
51 |
acagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaaccttt |
150 |
Q |
| |
|
||||||||||||| |||||||| |||| |||||||||||| ||| ||||||||||||||||||| || |||||||||||||||| || || ||| |
|
|
| T |
5345940 |
acagaatatggatgagaatgggagtggtggttgtttgcttcctggtgacagttatccagattggttaactttcaattctgaaggttcttctgttactttt |
5346039 |
T |
|
| Q |
151 |
caagttccccaagtggaaggccgtagcttgaaaacaat---gatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaaca |
247 |
Q |
| |
|
||||||| ||||||||||| || | ||||| ||||| ||| || |||||||| ||||||| | | ||| || | ||| |||||| | |||| |
|
|
| T |
5346040 |
gaagttcctcaagtggaagggcgaatgttgaagacaataacgatatgtgttgtctattcttcaacttcggataatataacatctgatggcctgagaaact |
5346139 |
T |
|
| Q |
248 |
tgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtat |
347 |
Q |
| |
|
|||| |||||||| |||||||||| ||||||||||| || ||||| |||||| | | | ||||||||||||||||| ||||||| || |||||||||| |
|
|
| T |
5346140 |
tgttggtgaaaaattacacaaaggctaccattcagctatacaagagagaggcagtagccgcctttgaagatgaggagggccagagagttgtatcaagtat |
5346239 |
T |
|
| Q |
348 |
agaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaa |
435 |
Q |
| |
|
|||||||||||||||||||||||| | |||||| | ||||| ||||||||||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
5346240 |
agaacctggtaacaaagtggaggttgtcgttgttattgagaatggtttcattgtgaagaagacagcaatttatctcatatatgatgaa |
5346327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 50 - 436
Target Start/End: Complemental strand, 5127014 - 5126625
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||||| || | || | |||| | |||||||||| |||| |||||||| |||||||| |||| | || ||||||||||||||||| || |
|
|
| T |
5127014 |
tacagaatatggatgccagttggtgtggtggtagtttgcttcctggtgatagttatccatattggttagccttcaactccgaaggttcttcggtaacttt |
5126915 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaaca---atgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaac |
246 |
Q |
| |
|
| |||| || |||||| |||| |||| ||||| | | ||||| |||||||||||| |||||||| | |||||| | |||| |||||||| || | |
|
|
| T |
5126914 |
tgaagtacctcaagtgaaagggcgtacgttgaagaaagtaatgatatgcattgtctattcttcaaccttggataacataacatcagatggccttacaagc |
5126815 |
T |
|
| Q |
247 |
atgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagta |
346 |
Q |
| |
|
|||| |||||||| |||| |||||||||||||| ||||||||||| |||||| ||||||||||||||||||||| | |||| ||| ||||||||| |
|
|
| T |
5126814 |
ttgttggtgaaaaattacacgaaggccaccattcaactctataagagagaggcagcagtctcctttgaagatgaggagggggagagagtagtatcaagta |
5126715 |
T |
|
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
||||| ||||||||||||| ||| | |||||||||| ||||| ||||||||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
5126714 |
tagaagctggtaacaaagttgagattgttgttgtttttaagaacggtttcattgtgaagaagacagctgtttatctcatatatgatgaac |
5126625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 130 - 436
Target Start/End: Complemental strand, 5065754 - 5065445
Alignment:
| Q |
130 |
gaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatg---tgcattgtctatacttcaaccccagctaacatga |
226 |
Q |
| |
|
||||||||||| ||||| ||| |||| || ||| || |||| |||| ||||| ||||| ||| |||||||||||| |||||||||| | |||||| |
|
|
| T |
5065754 |
gaaggttcttctgtaacttttgaagtccctcaaatgaaagggcgtatgttgaagacaataatgatatgcattgtctattcttcaaccccggataacatag |
5065655 |
T |
|
| Q |
227 |
tatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagag |
326 |
Q |
| |
|
||| |||||| | ||| |||| || ||||| ||||||| |||||||||||||||||||||| ||||| || |||||||||||||||||||| | |
|
|
| T |
5065654 |
catctgatggcctcacaaatttgttggtaaaaaattacacaaaatccaccattcagctctataagagagaggcgttaatctcctttgaagatgaggaggg |
5065555 |
T |
|
| Q |
327 |
ccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggta |
426 |
Q |
| |
|
||||| ||| |||||||||| |||||||| || |||||||| | |||||||||| |||||| ||||| ||||||| | |||| |||||||||| || |
|
|
| T |
5065554 |
gcagagagtagtatcaagtattgaacctggaaataaagtggattttgttgttgtttttgagaacggtttcgttgtgaagaggacaacagtttatctcata |
5065455 |
T |
|
| Q |
427 |
tatgatgaac |
436 |
Q |
| |
|
|||||||||| |
|
|
| T |
5065454 |
tatgatgaac |
5065445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 129 - 436
Target Start/End: Complemental strand, 23127613 - 23127306
Alignment:
| Q |
129 |
tgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgata |
228 |
Q |
| |
|
|||||||||||| |||| ||| ||| ||| ||||||||||| | || | |||| ||||| ||||| ||||| ||||||||||||||| |||||| | |
|
|
| T |
23127613 |
tgaaggttcttctgtaagttttgaagctcctcaagtggaagggcataacgtgaagacaataatgtgtgttgtcaatacttcaaccccagataacattacc |
23127514 |
T |
|
| Q |
229 |
tcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagcc |
328 |
Q |
| |
|
|| |||| |||||||| |||| || ||||| ||||||||| ||||||||| |||||||||| ||| |||| ||||| || ||||||||||| | |
|
|
| T |
23127513 |
tcggatggcgttaaaaacgtgttggtaaaaaattacacaaagggtaccattcagatctataagagagagacattagtctcgttcgaagatgaggaaggga |
23127414 |
T |
|
| Q |
329 |
agagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtata |
428 |
Q |
| |
|
|||| || |||||||| |||||||||||||||| ||||||| |||| ||||| ||||| ||||| ||||||| || ||| |||||||||| ||||| |
|
|
| T |
23127413 |
agagcttagtatcaagtgcagaacctggtaacaaaatggaggttgttgtcgtttttgagaatggtttcgttgtgaagaatacaacagtttatcttgtata |
23127314 |
T |
|
| Q |
429 |
tgatgaac |
436 |
Q |
| |
|
|||||||| |
|
|
| T |
23127313 |
tgatgaac |
23127306 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 96 - 411
Target Start/End: Complemental strand, 5073018 - 5072703
Alignment:
| Q |
96 |
tgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgc |
195 |
Q |
| |
|
||||||||| ||| ||||||| ||||| ||| || |||| |||||||| ||| |||| || ||||||||||| || | ||||| |||||||| ||| |
|
|
| T |
5073018 |
tgatggttacccaaattggttttcctttaattacgatggttgttcggtaaaatttgaagtccctcaagtggaagggcgcatattgaagacaatgatatgc |
5072919 |
T |
|
| Q |
196 |
attgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtg |
295 |
Q |
| |
|
|||||||| ||||| | ||| ||| | ||||| |||||||||||| || | |||||||| |||| || ||||||||||| || |||||||| | |
|
|
| T |
5072918 |
gttgtctattcttcaccaccaaataatgtagtatcagacggccttaaaaacttgatggtgaaaaattacactaaagccaccattcaactatataagagag |
5072819 |
T |
|
| Q |
296 |
aggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagttt |
395 |
Q |
| |
|
||||||| |||||||| ||||||| ||| || |||| || ||||||||||||| ||||||||| |||||||||| | |||||| | |||||| ||| |
|
|
| T |
5072818 |
aggcattagtctccttcaaagatgatgagggcgagagattagtatcaagtatagagcctggtaaccaagtggaggttgtcgttgttgttgagaacgattt |
5072719 |
T |
|
| Q |
396 |
cattgtgaaaaagaca |
411 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
5072718 |
cattgtgaaaaagaca |
5072703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 433
Target Start/End: Complemental strand, 5256218 - 5256113
Alignment:
| Q |
328 |
cagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtat |
427 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||||||||||||| | |||||||| |||| |||||||||||| ||||||||| ||||| |||||| |
|
|
| T |
5256218 |
cagagggtaatatcaagtattgaaccaggtaacaaagtggaggtcgtatttgttttcaagaatgatttcattgtgaagaagacagcaatttatttggtat |
5256119 |
T |
|
| Q |
428 |
atgatg |
433 |
Q |
| |
|
|||||| |
|
|
| T |
5256118 |
atgatg |
5256113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 215
Target Start/End: Complemental strand, 5256478 - 5256367
Alignment:
| Q |
104 |
atccagattggttaacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtcta |
203 |
Q |
| |
|
||||| |||||||||||| | ||||||||||||||| ||||| ||| |||| ||| |||| ||||| |||| ||||| ||||||||||||||||||| |
|
|
| T |
5256478 |
atccaaattggttaacctatagttctgaaggttcttctgtaacttttgaagtccccgaagttgaagggcgtaacttgatgtcaatgatgtgcattgtcta |
5256379 |
T |
|
| Q |
204 |
tacttcaacccc |
215 |
Q |
| |
|
|||||||||||| |
|
|
| T |
5256378 |
tacttcaacccc |
5256367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 431
Target Start/End: Original strand, 5253701 - 5253827
Alignment:
| Q |
305 |
tctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaa |
404 |
Q |
| |
|
||||||||||||| |||||| | || || ||| ||| |||||| |||||||| || ||||||||| | |||||||||| |||||||||||||||||||| |
|
|
| T |
5253701 |
tctcctttgaagacgaggaggggcaaagagtattattaagtattgaacctggaaataaagtggagtttgttgttgtttttgagaacagtttcattgtgaa |
5253800 |
T |
|
| Q |
405 |
aaagacagcagtttatctggtatatga |
431 |
Q |
| |
|
| ||| |||||||||| ||||||| |
|
|
| T |
5253801 |
gaggacgacagtttatctcatatatga |
5253827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 253 - 368
Target Start/End: Complemental strand, 5124622 - 5124507
Alignment:
| Q |
253 |
gtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaac |
352 |
Q |
| |
|
|||||||| |||| |||| |||||||| ||||||||||| || ||||| ||| | ||| |||| |||||| | || || || |||| |||||||||| |
|
|
| T |
5124622 |
gtgaaaaattacacgaaggggaccattcaactctataagagagatgcattagtcgcatttcaagaggaggaggggcatagattagtatcgagtatagaac |
5124523 |
T |
|
| Q |
353 |
ctggtaacaaagtgga |
368 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
5124522 |
ctggtaataaagtgga |
5124507 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 155; Significance: 4e-82; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 50 - 432
Target Start/End: Complemental strand, 47985775 - 47985393
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||| | | |||||||| | | ||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
47985775 |
tacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttt |
47985676 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatg |
249 |
Q |
| |
|
| |||| || ||||||||| | | || ||| || |||||||||||||||||||||||||||||| ||| | |||| | |||| ||||||||||||| || |
|
|
| T |
47985675 |
tgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaacgtg |
47985576 |
T |
|
| Q |
250 |
ttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatag |
349 |
Q |
| |
|
||||||| ||| ||||||| |||| |||||| ||||||||||||||| |||| ||||||||| |||||||||| | |||| ||| |||||||||||| |
|
|
| T |
47985575 |
ttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagtatag |
47985476 |
T |
|
| Q |
350 |
aacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| ||||| ||||||||||||| | || |||||||||||| ||||||||| |
|
|
| T |
47985475 |
aacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
47985393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 50 - 432
Target Start/End: Complemental strand, 48004349 - 48003967
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||| | | |||||||| | | ||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
48004349 |
tacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttt |
48004250 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatg |
249 |
Q |
| |
|
| |||| || ||||||||| | | || ||| || |||||||||||||||||||||||||||||| ||| | |||| | |||| ||||||||||||| || |
|
|
| T |
48004249 |
tgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaacgtg |
48004150 |
T |
|
| Q |
250 |
ttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatag |
349 |
Q |
| |
|
||||||| ||| ||||||| |||| |||||| ||||||||||||||| |||| ||||||||| |||||||||| | |||| ||| |||||||||||| |
|
|
| T |
48004149 |
ttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagtatag |
48004050 |
T |
|
| Q |
350 |
aacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
|||| ||||||||||||||||| |||||||||| ||||| ||||||||||||| | || |||||||||||| ||||||||| |
|
|
| T |
48004049 |
aacccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
48003967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 50 - 432
Target Start/End: Complemental strand, 47995062 - 47994680
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||| | | |||||||| | | ||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
47995062 |
tacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttt |
47994963 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatg |
249 |
Q |
| |
|
| |||| || ||||||||| | | || ||| || |||||||||||||||||||||||||||||| ||| | |||| | |||| ||||||||||||| || |
|
|
| T |
47994962 |
tgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaacgtg |
47994863 |
T |
|
| Q |
250 |
ttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatag |
349 |
Q |
| |
|
||||||| ||| ||||||| |||| |||||| ||||||||||||||| |||| ||||||||| |||||||||| | |||| ||| |||||||||||| |
|
|
| T |
47994862 |
ttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagtatag |
47994763 |
T |
|
| Q |
350 |
aacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||| ||||| ||||||||||||| | || |||||||||||| ||||||||| |
|
|
| T |
47994762 |
aatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
47994680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 50 - 432
Target Start/End: Complemental strand, 48013634 - 48013252
Alignment:
| Q |
50 |
tacagaatatggatctcaatgggagcggtgattgtttgcttcccactgatggttatccagattggttaacctttcattctgaaggttcttcggtaacctt |
149 |
Q |
| |
|
|||||||||||| | | |||||||| | | ||||||||| || |||| |||||||| |||||||||||||| |||||||||||||||||||||| || |
|
|
| T |
48013634 |
tacagaatatggctgttaatgggagtgattgttgtttgctccctggtgatagttatccaaattggttaacctttaattctgaaggttcttcggtaacttt |
48013535 |
T |
|
| Q |
150 |
tcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatg |
249 |
Q |
| |
|
| |||| || ||||||||| | | || ||| || |||||||||||||||||||||||||||||| ||| | |||| | |||| ||||||||||||| || |
|
|
| T |
48013534 |
tgaagtccctcaagtggaaaggcataacttaaagacaatgatgtgcattgtctatacttcaacctcagatgacataacatcagatggccttaaaaacgtg |
48013435 |
T |
|
| Q |
250 |
ttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatag |
349 |
Q |
| |
|
||||||| ||| ||||||| |||| |||||| ||||||||||||||| |||| ||||||||| |||||||||| | |||| ||| |||||||||||| |
|
|
| T |
48013434 |
ttagtgataaatcacacaagagccatcattcaactctataagagtgagacattaatctcctttggagatgaggagggggagagagtagtatcaagtatag |
48013335 |
T |
|
| Q |
350 |
aacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgat |
432 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||| ||||| ||||||||||||| | || |||||||||||| ||||||||| |
|
|
| T |
48013334 |
aatccggtaacaaagtggaggtggttgttgtttttgagaatggtttcattgtgaagaggatagcagtttatcttgtatatgat |
48013252 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 10)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 125 - 436
Target Start/End: Complemental strand, 4319609 - 4319298
Alignment:
| Q |
125 |
attctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacat |
224 |
Q |
| |
|
|||| ||||||||||| |||| ||| |||| || ||||||||||| ||||||||||| ||||| ||||||||||||||| |||||| |||| |||| |
|
|
| T |
4319609 |
attcagaaggttcttctgtaatttttgaagtccctcaagtggaaggacgtagcttgaagacaataatgtgcattgtctattcttcaagcccatacgacat |
4319510 |
T |
|
| Q |
225 |
gatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggag |
324 |
Q |
| |
|
| |||| ||||||| |||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| || ||||| |||||||||| |||||||| |
|
|
| T |
4319509 |
aacatcagatggccttgaaaatgtgttagtgataaatcacacaaagaccaccattcaactctataagagagaagcattatcctcctttgaaaatgaggag |
4319410 |
T |
|
| Q |
325 |
agccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctgg |
424 |
Q |
| |
|
| ||||| || || ||| ||| ||||||||| |||| |||||| | |||| ||||| | ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4319409 |
tggcagagagttgtaacaaatatggaacctggtgacaaggtggagattgttgtcgtttttgggaacagtttcattgtgatgaagacagcagtttatctca |
4319310 |
T |
|
| Q |
425 |
tatatgatgaac |
436 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4319309 |
tatatgatgaac |
4319298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 234 - 436
Target Start/End: Complemental strand, 4132813 - 4132614
Alignment:
| Q |
234 |
tggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagg |
333 |
Q |
| |
|
|||||| ||||| |||| |||| ||| ||||| ||| | |||||||||||||||||||| |||||||| | |||||||||| |||||||| | ||||| |
|
|
| T |
4132813 |
tggcctaaaaaatgtgttggtgataaatcacacgaagactaccattcagctctataagagagaggcattcgcctcctttgaaaatgaggagtggcagaga |
4132714 |
T |
|
| Q |
334 |
gtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatg |
433 |
Q |
| |
|
||| |||||| ||| ||||||||| ||||||| ||| ||||||||||| | ||||||||||||||||| ||||||||||||||||| ||||||||| |
|
|
| T |
4132713 |
gtagtatcaaatatggaacctggtgacaaagtcgag---attgttgtttttgggaacagtttcattgtgatgaagacagcagtttatctcatatatgatg |
4132617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 160 - 436
Target Start/End: Complemental strand, 4122916 - 4122640
Alignment:
| Q |
160 |
caagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaa |
259 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||| | |||| |||| | ||| |||| ||||||| |||| |||| |||| || |
|
|
| T |
4122916 |
caagtggaaggacgtagcttgaagacaatgatgtgcattgtctattcatcaagcccaaatggcatagcatcagttggccttcaaaatgtgttggtgataa |
4122817 |
T |
|
| Q |
260 |
accacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaa |
359 |
Q |
| |
|
| ||||||||| |||||||||| ||||||||||| ||||| || |||||| ||| ||||||| | |||| || |||||| ||| ||||||||| | |
|
|
| T |
4122816 |
atcacacaaagaccaccattcaactctataagagagaggcgttatcctccttagaaaatgaggaatggaagagagtggtatcaaatatggaacctggtga |
4122717 |
T |
|
| Q |
360 |
caaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||||||||| | |||||||||| | |||||||||||||||| |||||| |||||||||| |||||||||||| |
|
|
| T |
4122716 |
caaagtggagattgttgttgtttttggaaacagtttcattgtgatgaagacatcagtttatctcatatatgatgaac |
4122640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 131 - 436
Target Start/End: Original strand, 4362546 - 4362851
Alignment:
| Q |
131 |
aaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatc |
230 |
Q |
| |
|
|||||| ||| |||| ||| |||| || ||||||||||| |||||||||| ||||| ||||||||||||||| |||||| |||| | |||| | ||| |
|
|
| T |
4362546 |
aaggttattctgtaatttttgaagtccctcaagtggaaggatgtagcttgaagacaataatgtgcattgtctattcttcaagcccatatgacataacatc |
4362645 |
T |
|
| Q |
231 |
aagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccag |
330 |
Q |
| |
|
| |||||||| ||| |||| |||| ||| ||||||||| |||||||||| ||||||||||| ||||| || ||||| ||| ||| ||| | ||| |
|
|
| T |
4362646 |
agatggccttagaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcgtccttcgaaaatgcggactggcag |
4362745 |
T |
|
| Q |
331 |
agggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatg |
430 |
Q |
| |
|
|| || ||||||| ||| ||||||||| ||||||||||| | || |||| | | ||||| | ||||||||| ||||||||||||||||| |||||| |
|
|
| T |
4362746 |
agagtgatatcaaatatggaacctggtgacaaagtggagatagttattgtaatggtgaacaatgtcattgtgacgaagacagcagtttatctcatatatg |
4362845 |
T |
|
| Q |
431 |
atgaac |
436 |
Q |
| |
|
|||||| |
|
|
| T |
4362846 |
atgaac |
4362851 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 163 - 422
Target Start/End: Original strand, 4336928 - 4337187
Alignment:
| Q |
163 |
gtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaacc |
262 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||||||||||||| |||||| |||| | |||| | |||| ||||||| |||| |||| |||| ||| | |
|
|
| T |
4336928 |
gtggaaggacgtagcttgaagacaatgatgtgcattgtctattcttcaagcccaaatgacataacatcagatggccttcaaaatgtgttggtgataaatc |
4337027 |
T |
|
| Q |
263 |
acacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaa |
362 |
Q |
| |
|
|||||||| |||||||||| |||| |||||| |||||||| ||||| ||| |||||||| | ||||| || |||||| ||| ||||||||| | || |
|
|
| T |
4337028 |
acacaaagaccaccattcaactctttaagagagaggcattatcgtccttcgaaaatgaggagtggcagagagtggtatcaaatatggaacctggtgataa |
4337127 |
T |
|
| Q |
363 |
agtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatct |
422 |
Q |
| |
|
||| ||| | |||||||||| | |||||||| ||||||| | |||| |||||||||| |
|
|
| T |
4337128 |
agtcgagattgttgttgtttttgggaacagttatattgtgatgaggacaacagtttatct |
4337187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 131 - 436
Target Start/End: Original strand, 4346350 - 4346662
Alignment:
| Q |
131 |
aaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttcaaccccagctaacat------ |
224 |
Q |
| |
|
|||||| ||| |||| |||| |||| || ||||||||||| | ||||||||| ||||| ||||||||||||||| |||||| ||||| | |||| |
|
|
| T |
4346350 |
aaggttattctgtaatctttgaagtccctcaagtggaaggacatagcttgaagacaataatgtgcattgtctattcttcaagcccagatgacataacatc |
4346449 |
T |
|
| Q |
225 |
-gatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgagga |
323 |
Q |
| |
|
|| |||| |||||||||||| |||| |||| ||| ||||||||| |||||||||| ||||||||||| ||||| || ||||||||| ||||| |
|
|
| T |
4346450 |
agacatcagatggccttaaaaatgtgttggtgataaatcacacaaagaccaccattcaactctataagagagaggcgttatcgtcctttgaaagggagga |
4346549 |
T |
|
| Q |
324 |
gagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctg |
423 |
Q |
| |
|
| ||||| | ||||| | ||| ||||||||| ||||||||||| | |||||||| | | ||||| | ||||||||| ||||||||||||||||| |
|
|
| T |
4346550 |
ctggcagagaatgatatcgaatatggaacctggtgacaaagtggagatagttgttgttatggtgaacaatgtcattgtgacgaagacagcagtttatctc |
4346649 |
T |
|
| Q |
424 |
gtatatgatgaac |
436 |
Q |
| |
|
|||||||||||| |
|
|
| T |
4346650 |
atatatgatgaac |
4346662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 253 - 436
Target Start/End: Original strand, 25568956 - 25569142
Alignment:
| Q |
253 |
gtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaac |
352 |
Q |
| |
|
|||||||| |||| ||| ||||||||||| |||| ||||| |||||||| || ||||||||| | |||||| | || | ||| ||||||||||||||| |
|
|
| T |
25568956 |
gtgaaaaattacaccaagtccaccattcaggtctacaagagagaggcattagtttcctttgaaaacgaggaggggcatatagtagtatcaagtatagaac |
25569055 |
T |
|
| Q |
353 |
ctggtaacaaagtggaggtcattgttgttttcga---gaacagtttcattgtgaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
|||| |||||||||||||| || ||||||| || | |||||||| ||||| || ||| |||||||||| ||||| ||||||| |
|
|
| T |
25569056 |
ctggaaacaaagtggaggttgtttttgtttttgagtggcgcagtttcaaagtgaagaatacaacagtttatctcgtatacgatgaac |
25569142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 306 - 383
Target Start/End: Original strand, 6729585 - 6729662
Alignment:
| Q |
306 |
ctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgtttt |
383 |
Q |
| |
|
||||||||| || ||||| | ||||| ||| ||||| | ||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6729585 |
ctcctttgaggacgaggattggcagagcataacatcaaatctagaacctggtaacaaagtggaggttatggttgtttt |
6729662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 6797865 - 6797901
Alignment:
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgtttt |
383 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6797865 |
tagaacctggtaacaaagtggaggttatggttgtttt |
6797901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 6838788 - 6838824
Alignment:
| Q |
347 |
tagaacctggtaacaaagtggaggtcattgttgtttt |
383 |
Q |
| |
|
||||||||||||||||||||||||| || |||||||| |
|
|
| T |
6838788 |
tagaacctggtaacaaagtggaggttatggttgtttt |
6838824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 99; Significance: 1e-48; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 102 - 436
Target Start/End: Complemental strand, 36213251 - 36212917
Alignment:
| Q |
102 |
ttatccagattggttaacctttcattctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtc |
201 |
Q |
| |
|
|||||| |||||||||||||| ||| |||||||||| |||| ||| | || || | |||||| || |||| ||| || ||||| ||||| |||||| |
|
|
| T |
36213251 |
ttatcctgattggttaaccttcaattgcaaaggttcttctgtaatttttgatgtccctcgagtggatggacgtaacttaaagacaataatgtgtattgtc |
36213152 |
T |
|
| Q |
202 |
tatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcat |
301 |
Q |
| |
|
||| ||||||| |||| ||||| |||| ||| ||||||||| || | || ||||| ||||||||||| ||||||||| |||||||||| ||||||| |
|
|
| T |
36213151 |
tattcttcaactccagaaaacatagcatcagatggacttaaaaacgtgatggtaaaaaatcacacaaaggctaccattcagatctataagagagaggcat |
36213052 |
T |
|
| Q |
302 |
tggtctcctttgaagatgaggagagccagagggtaatatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgt |
401 |
Q |
| |
|
| ||||| ||||||||||||||| | ||||| || |||||||||||||||||||| | ||| ||||||| |||||||||| ||||||| ||||||||| |
|
|
| T |
36213051 |
tagtctcatttgaagatgaggaggggcagagattagtatcaagtatagaacctggtgataaaatggaggttgttgttgtttttgagaacaatttcattgt |
36212952 |
T |
|
| Q |
402 |
gaaaaagacagcagtttatctggtatatgatgaac |
436 |
Q |
| |
|
||| |||||||| ||||||| | |||||||||| |
|
|
| T |
36212951 |
gaagaagacagcgatttatctcatttatgatgaac |
36212917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 18936453 - 18936529
Alignment:
| Q |
133 |
ggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttc |
209 |
Q |
| |
|
|||||||| ||||| || ||||||| |||||||| || |||||||||||||| || |||||| |||||||| |||| |
|
|
| T |
18936453 |
ggttcttctgtaactttcgaagttccacaagtggatgggcgtagcttgaaaaccatcatgtgcgttgtctattcttc |
18936529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 34723590 - 34723514
Alignment:
| Q |
133 |
ggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgtctatacttc |
209 |
Q |
| |
|
|||||||| ||||| || ||||||| ||||||| || ||||||||||||||||| ||||||| ||||||| |||| |
|
|
| T |
34723590 |
ggttcttctgtaactttcgaagttccaaaagtggatgggcgtagcttgaaaacaatcatgtgcactgtctattcttc |
34723514 |
T |
|
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Target: scaffold0294 (Bit Score: 54; Significance: 8e-22; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 238 - 431
Target Start/End: Complemental strand, 8071 - 7878
Alignment:
| Q |
238 |
cttaaaaacatgttagtgaaaaaccacacaaaggccaccattcagctctataagagtgaggcattggtctcctttgaagatgaggagagccagagggtaa |
337 |
Q |
| |
|
|||||||| ||||||||||||| |||||||||||||||||||| ||||||||||||| |||| | |||||| | |||||||| | |||| || |
|
|
| T |
8071 |
cttaaaaatgtgttagtgaaaaattacacaaaggccaccattcagatctataagagtgaaacattagcttcctttaaggatgaggaaaagcagaatttag |
7972 |
T |
|
| Q |
338 |
tatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgtgaaaaagacagcagtttatctggtatatga |
431 |
Q |
| |
|
|||||||| ||||||| || |||||||||||||| |||||||||| | | || ||||||||| |||| | ||| || ||||||| ||||||| |
|
|
| T |
7971 |
tatcaagtgtagaacccggaaacaaagtggaggttgttgttgtttttggggacggtttcattgcgaaagaaacaacaatttatcttatatatga |
7878 |
T |
|
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Target: scaffold1476 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold1476
Description:
Target: scaffold1476; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 401
Target Start/End: Original strand, 43 - 106
Alignment:
| Q |
338 |
tatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgt |
401 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
43 |
tatcaagtatagaacctggtaataaagtggaggttgctgttgtttatgagaacaatttcattgt |
106 |
T |
|
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Target: chr5 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 268
Target Start/End: Original strand, 8879494 - 8879660
Alignment:
| Q |
102 |
ttatccagattggttaacctttca-ttctgaaggttcttcggtaacctttcaagttccccaagtggaaggccgtagcttgaaaacaatgatgtgcattgt |
200 |
Q |
| |
|
||||||| |||||||||| ||||| || ||||||| ||| ||||| ||| ||||||| ||||| ||||| | | |||||| | |||||||||||||| |
|
|
| T |
8879494 |
ttatccaaattggttaac-tttcagttgtgaaggtccttgtgtaacttttaaagttcctcaagttgaagggagaaacttgaagtcgatgatgtgcattgt |
8879592 |
T |
|
| Q |
201 |
ctatacttcaaccccagctaacatgatatcaagtggccttaaaaacatgttagtgaaaaaccacacaa |
268 |
Q |
| |
|
|||||| |||||||||| ||||| |||||| ||| || ||||| ||||| || | ||| ||||||| |
|
|
| T |
8879593 |
ctatacatcaaccccagataacacaatatcagatggactaaaaaatatgttggttataaatcacacaa |
8879660 |
T |
|
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Target: chr2 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 401
Target Start/End: Complemental strand, 22583396 - 22583333
Alignment:
| Q |
338 |
tatcaagtatagaacctggtaacaaagtggaggtcattgttgttttcgagaacagtttcattgt |
401 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| ||||||| ||||||||| |
|
|
| T |
22583396 |
tatcaagtatagaacctggtaataaagtggaggttgctgttgtttatgagaacaatttcattgt |
22583333 |
T |
|
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