View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4861-Insertion-3 (Length: 967)
Name: NF4861-Insertion-3
Description: NF4861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4861-Insertion-3 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 483; Significance: 0; HSPs: 10)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 483; E-Value: 0
Query Start/End: Original strand, 8 - 518
Target Start/End: Complemental strand, 4620408 - 4619898
Alignment:
| Q |
8 |
ttctgtgttgaattggcagaattccaagattaaggtgcaataatggataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctggga |
107 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4620408 |
ttctgtgttgaattggcagaattccaagattaaggtgcaataatggataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctggga |
4620309 |
T |
|
| Q |
108 |
agtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttc |
207 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4620308 |
agtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggatgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttc |
4620209 |
T |
|
| Q |
208 |
attcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactac |
307 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4620208 |
attcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactac |
4620109 |
T |
|
| Q |
308 |
tgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgctgttctcgtatatgattctacta |
407 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4620108 |
tgcactctcattgatgcccccggacacagagatttcattaagaacatgatcaccggaacatcccaagctgactgtgctgttctcgtatatgattctacta |
4620009 |
T |
|
| Q |
408 |
ctattggatctgactttgaaactgctatttctagggttcgtcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctg |
507 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4620008 |
ctattggatctgactctgaaactgctatttctagggttcgtcagatccatgaacatgctgtccttgctttaacccttggtgtgaagcaaatgatctgctg |
4619909 |
T |
|
| Q |
508 |
ctgcaacaagg |
518 |
Q |
| |
|
|| |||||||| |
|
|
| T |
4619908 |
ctacaacaagg |
4619898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 345; E-Value: 0
Query Start/End: Original strand, 595 - 967
Target Start/End: Complemental strand, 4619821 - 4619448
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4619821 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
4619722 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4619721 |
ataaccctaaaaaaattacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
4619622 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4619621 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
4619522 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgccccga-tgggctgca |
967 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
4619521 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgccccgattgggctgca |
4619448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 203; E-Value: 1e-110
Query Start/End: Original strand, 88 - 390
Target Start/End: Complemental strand, 1847030 - 1846728
Alignment:
| Q |
88 |
tggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaagcc |
187 |
Q |
| |
|
||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||||||||||||| |
|
|
| T |
1847030 |
tggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagagatttgagaaagaagct |
1846931 |
T |
|
| Q |
188 |
gctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaagt |
287 |
Q |
| |
|
||||||||||||| | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| | |||| |
|
|
| T |
1846930 |
gctgagataaacaggcgttcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattgacatttctctatggaagt |
1846831 |
T |
|
| Q |
288 |
ttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgctgt |
387 |
Q |
| |
|
||||||||||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||||| || |
|
|
| T |
1846830 |
ttgagacaaccaacttcctctgcactctcattgatgcccccggacacagggatttcattaagaacatgatcaccggagcatccgaagctgactgtgccgt |
1846731 |
T |
|
| Q |
388 |
tct |
390 |
Q |
| |
|
||| |
|
|
| T |
1846730 |
tct |
1846728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 135; E-Value: 8e-70
Query Start/End: Original strand, 48 - 410
Target Start/End: Complemental strand, 4298151 - 4297789
Alignment:
| Q |
48 |
taatggataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggagg |
147 |
Q |
| |
|
|||||||||| ||||| | ||||||| |||||| ||||||| |||| | |||| ||||||||||||||| ||| ||||||| ||||||| || ||||| |
|
|
| T |
4298151 |
taatggataagaaaaaggctcgtattaacattgtggttattggccatgccaactccgggaagtcaaccactactgctcatttgctctacaaactcggagg |
4298052 |
T |
|
| Q |
148 |
tattaaaaaggacgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgag |
247 |
Q |
| |
|
||| ||||||| ||||||||| || ||||||||| || | |||| | |||||| ||| ||||| ||||||||||| |||||||| ||||| ||||| |
|
|
| T |
4298051 |
cattgaaaaggatgtcattgagagacttgagaaagtagatgttgaggttaacatgccttcgttcaagtatgcttgggtacttgacaaactcaaagctgac |
4297952 |
T |
|
| Q |
248 |
cgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcatta |
347 |
Q |
| |
|
| |||||||||| |||||| |||||||||||||||||||||||||||| ||||||| |||||| | ||||||||||||||||||| || || | ||||| |
|
|
| T |
4297951 |
catgaaagaggtgccacaattgacatttctctgtccaagtttgagacaaacaagtacaactgcattgtcattgatgcccccggacatagggaatgcatta |
4297852 |
T |
|
| Q |
348 |
agaacatgatcactggaacatcccaagctgactgtgctgttctcgtatatgattctactacta |
410 |
Q |
| |
|
||||||||| ||||||| | |||| |||| |||||| ||||||||| |||||| ||||||| |
|
|
| T |
4297851 |
agaacatgaccactggagcgtccctagctaactgtgatgttctcgtcattgattccactacta |
4297789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 134; E-Value: 3e-69
Query Start/End: Original strand, 54 - 359
Target Start/End: Original strand, 4787123 - 4787428
Alignment:
| Q |
54 |
ataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaa |
153 |
Q |
| |
|
|||||| ||||||| ||||||| |||||| |||||||||| | | |||| |||||||||||||| ||| ||||||| |||||||||||||||| ||| |
|
|
| T |
4787123 |
ataaagaaaaggttcgtattaacattgtggttattggtcaagccaactccgggaagtcaaccaccactgctcatttgctctacaagcttggaggcattgg |
4787222 |
T |
|
| Q |
154 |
aaaggacgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaa |
253 |
Q |
| |
|
|||||| ||||||||| || ||||||||||||| |||| ||| | ||||||||| |||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
4787223 |
aaaggatgtcattgagagacttgagaaagaagcttatgaggctaactggccttcattcaagtatgcttgggtgcttgacaaactcaagggtgagcgtgaa |
4787322 |
T |
|
| Q |
254 |
agaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaaca |
353 |
Q |
| |
|
|||||| |||||| ||||||||| |||||||||||||||||| ||||||| |||||||| |||||||||| ||||||||||| || | ||||| ||||| |
|
|
| T |
4787323 |
agaggtgccacaattgacatttctatgtccaagtttgagacaaacaagtacaactgcactgtcattgatgctcccggacacagggaatacattaggaaca |
4787422 |
T |
|
| Q |
354 |
tgatca |
359 |
Q |
| |
|
|||||| |
|
|
| T |
4787423 |
tgatca |
4787428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 117; E-Value: 4e-59
Query Start/End: Original strand, 608 - 956
Target Start/End: Complemental strand, 1846608 - 1846260
Alignment:
| Q |
608 |
agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttg-gagaggattggctataaccctnnnn |
706 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||| || |||||| |||||| ||||||| | |||| ||||||||||||| |
|
|
| T |
1846608 |
agatggatgccactacacccaaatactccaaggataggtatgaacaaattgtgagtcaaatttcaccctttttgagcgagg-ttggctataacccaggta |
1846510 |
T |
|
| Q |
707 |
nnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctct |
806 |
Q |
| |
|
|| | ||| | || |||||||||| |||||||||||| | ||||||| |||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1846509 |
aaattccttttatccctatctctggttacgagggagataacatcattgagcactcttctaaccttgactggtacacgggtcccacccttcttgaagctct |
1846410 |
T |
|
| Q |
807 |
tgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtggga |
906 |
Q |
| |
|
||||||||||| |||||| ||| | | || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1846409 |
tgaccaaatcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggaggaattggaattgtgcctgtggga |
1846310 |
T |
|
| Q |
907 |
tgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
| |||||| | ||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
1846309 |
cgcgttgagtctggtatcttgaaacctggaatggtgctgacttttgcccc |
1846260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 713 - 956
Target Start/End: Original strand, 4787676 - 4787919
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||| || || ||||| |||||||||| |||||| ||||||||||||||| ||||| |
|
|
| T |
4787676 |
catttgttcccatctctagttttgatggagataacttgattgaccgctccactaattttgactggtaaatgggtccgacccttcttgaagctattgacag |
4787775 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
||| || |||||||| ||||||||||| |||||||||| ||||| || |||| ||||||||||||||||||| ||| |||| |||||||| |||| |
|
|
| T |
4787776 |
aatgaaagagcctaagaggccatcaaatttgcctctccgactaccaattatggatttctacaagattggaggaatcggagttgtgtctgtgggacgtgtc |
4787875 |
T |
|
| Q |
913 |
gagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
||||| ||| |||| ||||||||| |||||||||||||| |
|
|
| T |
4787876 |
gagactggttgcttgtgccctggaatgtctgtgacttttgcccc |
4787919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 713 - 956
Target Start/End: Complemental strand, 4297496 - 4297253
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
||||| ||||||||||| ||||||| ||||||||||||||||| || || ||||| ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4297496 |
catttattcccatctctagttttgacggagataacttgattgaccgctccactaattttgactggtacaagggtcccacccttcttgaagctattgacat |
4297397 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
||| || | |||| ||||||||||| ||||||||| || || ||| |||| |||| || ||||||||||| || |||||||||||| |||| |
|
|
| T |
4297396 |
aatgaaagggcctgcgaggccatcaaattttcctctccgactatcaattcaggatttctagaatattggaggaatcagagatgtgcctgtgggccgtgtc |
4297297 |
T |
|
| Q |
913 |
gagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
||||| ||| |||| ||||||||| |||||||||||||| |
|
|
| T |
4297296 |
gagactggttgcttgcgccctggaatgtctgtgacttttgcccc |
4297253 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 447 - 518
Target Start/End: Original strand, 4787460 - 4787531
Alignment:
| Q |
447 |
gtcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||| || |||||||||| | || || ||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4787460 |
gtcagacccttgaacatgctcttcttgccttcactgttggtgtgaagcaaatgatctgctgctgcaacaagg |
4787531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 595 - 649
Target Start/End: Complemental strand, 4297614 - 4297560
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatg |
649 |
Q |
| |
|
|||||||||| | |||||||||||||| ||||||||||||||| | ||||||||| |
|
|
| T |
4297614 |
catctatcttcacagatggatgccactacacccaaatactccatggataggtatg |
4297560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 208; Significance: 1e-113; HSPs: 28)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 78 - 393
Target Start/End: Original strand, 38137497 - 38137812
Alignment:
| Q |
78 |
ttgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttga |
177 |
Q |
| |
|
||||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||| || |||| |
|
|
| T |
38137497 |
ttgtggttattggtcatgttgactctgggaagtcaactactgctggtcatttgatctacaaacttggaggtattgaaaaggatgtcattgagagacttga |
38137596 |
T |
|
| Q |
178 |
gaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttct |
277 |
Q |
| |
|
||||||||| |||||||||||| | || ||||| |||||||||||||| |||||||||||||| |||||||||||||||||||| || ||||||||| |
|
|
| T |
38137597 |
gaaagaagctactgagataaacaagccatcgttcaagtatgcttgggtgctcgacaagctcaaggccgagcgtgaaagaggtatcactattgacatttct |
38137696 |
T |
|
| Q |
278 |
ctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctg |
377 |
Q |
| |
|
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || || |||||||||| |
|
|
| T |
38137697 |
ctgtcaaagtttgagactaccaagtactactgcactctcattgatgcccccggacacagggatttcattaagaacatgattaccgggacgtcccaagctg |
38137796 |
T |
|
| Q |
378 |
actgtgctgttctcgt |
393 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
38137797 |
actgtgctgttctcgt |
38137812 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 208; E-Value: 1e-113
Query Start/End: Original strand, 48 - 518
Target Start/End: Complemental strand, 43046125 - 43045661
Alignment:
| Q |
48 |
taatggataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggagg |
147 |
Q |
| |
|
|||||| ||||| ||||||| || || |||||| | ||||| ||||||||||||||||| |||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
43046125 |
taatgggtaaagaaaaggttcacatcaacattgtggtcattggccatgtcgactctgggaaatcaaccaccactggtcacttgatctacaagcttggagg |
43046026 |
T |
|
| Q |
148 |
tattaaaaaggacgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgag |
247 |
Q |
| |
|
|||| | ||| ||||||||| | |||||||||||||| |||||||| |||| | |||||||||| ||||| ||||| |||||||||||||||||||| |
|
|
| T |
43046025 |
tattgacaagcgtgtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaa |
43045926 |
T |
|
| Q |
248 |
cgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcatta |
347 |
Q |
| |
|
||||||||||||||||| || |||||| |||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| |
|
|
| T |
43045925 |
cgtgaaagaggtatcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcatta |
43045826 |
T |
|
| Q |
348 |
agaacatgatcactggaacatcccaagctgactgtgctgttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcg |
447 |
Q |
| |
|
||||||||||||| ||||||||||||||||| ||||| |||||| | |||||| |||||| ||| |||||| | | |||||||| || | | |
|
|
| T |
43045825 |
agaacatgatcaccggaacatcccaagctgattgtgccgttctcatcattgattccactactggtgg------ttttgaagccggtatttctaaggatgg |
43045732 |
T |
|
| Q |
448 |
tcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
||||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
43045731 |
tcagacccgtgaacatgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaagg |
43045661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 70 - 390
Target Start/End: Original strand, 7890673 - 7890993
Alignment:
| Q |
70 |
tattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgag |
169 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||||||||| ||||||| ||||| || |
|
|
| T |
7890673 |
tattaacattctgtttattggtcatgtcgactccgggaagtcaacgacggctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgat |
7890772 |
T |
|
| Q |
170 |
cgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcg |
269 |
Q |
| |
|
|||||||||||||||| |||||||| |||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
7890773 |
agatttgagaaagaagctgctgagatgaacaggcattcattcaagtatgcttgggtgcttgacaagctcaaggccgagcgtgaaagaggtatcacaattg |
7890872 |
T |
|
| Q |
270 |
acatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatc |
369 |
Q |
| |
|
|||||||||||| ||||||||||||||||| | | ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| | || |
|
|
| T |
7890873 |
acatttctctgtggaagtttgagacaaccaacttccgctgcactctcattgatgcccctggacacagggatttcattaagaacatgatcactggagcgtc |
7890972 |
T |
|
| Q |
370 |
ccaagctgactgtgctgttct |
390 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
7890973 |
cgaagctgactgtgctgttct |
7890993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 77 - 518
Target Start/End: Complemental strand, 43084524 - 43084089
Alignment:
| Q |
77 |
attgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttg |
176 |
Q |
| |
|
|||||| | ||||| ||||| ||||||||||| |||||||| ||||||| |||||||||||||||||||||||| | ||| ||||| ||| | |||| |
|
|
| T |
43084524 |
attgtggtcattggccatgttgactctgggaaatcaaccacaactggtcacttgatctacaagcttggaggtattgacaagcgtgtcatagagaggtttg |
43084425 |
T |
|
| Q |
177 |
agaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttc |
276 |
Q |
| |
|
|||||||||| |||||||| |||| | |||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| || |||||| | |
|
|
| T |
43084424 |
agaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgc |
43084325 |
T |
|
| Q |
277 |
tctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagct |
376 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
43084324 |
tctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagct |
43084225 |
T |
|
| Q |
377 |
gactgtgctgttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcgtcagatccgtgaacatgctgtcctcgctt |
476 |
Q |
| |
|
|| ||||| |||||| | |||||| |||||| ||| |||||| | | |||||||| || | |||||| ||||||||||||| |||| |||| |
|
|
| T |
43084224 |
gattgtgccgttctcatcattgattccactactggtgg------ttttgaagccggtatttctaaggatggtcagacccgtgaacatgctctccttgctt |
43084131 |
T |
|
| Q |
477 |
tcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
43084130 |
tcactcttggtgtgaagcaaatgatctgctgttgcaacaagg |
43084089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 86 - 518
Target Start/End: Original strand, 43066320 - 43066746
Alignment:
| Q |
86 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaag |
185 |
Q |
| |
|
||||| |||||||||||||| ||||||||||| ||||||| || |||||||| |||||||||||| | ||| ||||||||| | ||||||||||||| |
|
|
| T |
43066320 |
attggccatgtcgactctggcaagtcaaccaccactggtcacttaatctacaaacttggaggtattgacaagcgtgtcattgagaggtttgagaaagaag |
43066419 |
T |
|
| Q |
186 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
285 |
Q |
| |
|
| |||||||| |||| | |||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| || |||||| |||| | || |
|
|
| T |
43066420 |
ctgctgagatgaacaagcgttcattcaagtatgcctgggttcttgacaagctcaaggctgaacgtgaaagaggtatcaccattgacattgctctctggaa |
43066519 |
T |
|
| Q |
286 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgct |
385 |
Q |
| |
|
|||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
|
|
| T |
43066520 |
gtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcaccggaacatcccaagctgattgtgcc |
43066619 |
T |
|
| Q |
386 |
gttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcgtcagatccgtgaacatgctgtcctcgctttcacccttg |
485 |
Q |
| |
|
|||||| | |||||| |||||| ||| |||||| | | |||||||| || | |||||| ||||||||||||| |||| |||||||| |||| |
|
|
| T |
43066620 |
gttctcatcattgattccactactggtgg------ttttgaagccggtatttctaaggatggtcagacccgtgaacatgctctccttgctttcactcttg |
43066713 |
T |
|
| Q |
486 |
gtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| |
|
|
| T |
43066714 |
gtgtgaagcaaatgatctgctgttgcaacaagg |
43066746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 61 - 393
Target Start/End: Original strand, 45983332 - 45983664
Alignment:
| Q |
61 |
aaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggac |
160 |
Q |
| |
|
||||||| ||||||| |||||| ||||||||||||| ||||| ||||||||||||||| |||||||||||||| |||| |||||| ||||| | ||| |
|
|
| T |
45983332 |
aaaggttcgtattaacattgtggttattggtcatgtggactccgggaagtcaaccactactggtcatttgatccacaaacttggatgtattcacaagagt |
45983431 |
T |
|
| Q |
161 |
gtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggta |
260 |
Q |
| |
|
||||||||| | ||||||||||||| ||| |||| |||| | |||||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
45983432 |
gtcattgagagtcttgagaaagaagctgctaagatgaacaagcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgaacgtgaaagaggtg |
45983531 |
T |
|
| Q |
261 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcac |
360 |
Q |
| |
|
| ||||| |||||| | ||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
45983532 |
ttacaattgacattaccctgtcgaagtttgagacaaacaagtacaactgcactgtcattgatgcccccggacacagggatttcattaagaacatgatcac |
45983631 |
T |
|
| Q |
361 |
tggaacatcccaagctgactgtgctgttctcgt |
393 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |
|
|
| T |
45983632 |
cggaacgtcccaagctgactgtgctgttctcgt |
45983664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 185; E-Value: 1e-99
Query Start/End: Original strand, 596 - 956
Target Start/End: Original strand, 38138009 - 38138369
Alignment:
| Q |
596 |
atctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttgga-gaggattggct |
694 |
Q |
| |
|
|||||| |||| |||||||||||||| ||||||||||||||||| |||||||||||||| ||||||| | ||||||| ||||||| || | |||||| |
|
|
| T |
38138009 |
atctatattgacagatggatgccactacacccaaatactccaaggataggtatgaagaaattgtgaaggaattttcaccctttttgattgatg-ttggct |
38138107 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
|||||| || ||||||||||||||||||||||||||||||||||| | ||||| || ||| |||| ||||||||||| ||||||||||||| |
|
|
| T |
38138108 |
ataacctagatgaaattccatttgttcccatctctggttttgagggagataacatcattgaacgctctactaaccttgactggtataagggtcccaccct |
38138207 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| |||| || | |||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
38138208 |
tcttgaagctcttgaccaaatcaaggagcctaagaggctattagacaagcctctccgattaccacttcaggatgtctacaagattggaggaattggaact |
38138307 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||||||||||| | ||||||| ||||||||||||||| |||||| ||||||||||||||| |
|
|
| T |
38138308 |
gtgcctgtgggacgggttgagagcggtgtcttgaaaccaggaatggcggtgacttttgcccc |
38138369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 184; E-Value: 4e-99
Query Start/End: Original strand, 61 - 391
Target Start/End: Original strand, 40034320 - 40034648
Alignment:
| Q |
61 |
aaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggac |
160 |
Q |
| |
|
||||||| |||||| || || ||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
40034320 |
aaaggttcatattaacatcgtatttattggtaatgtcgactctgggaagtcaaccactggtggtcatttgatctacaagcttggcggtattaaaaaggat |
40034419 |
T |
|
| Q |
161 |
gtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggta |
260 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||| |||| | | |||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
40034420 |
gtcattgagaaatttgagaaagaagctgctgagatgaacaagcgctcattcaagtatgcttgggtacttgacaagctcaaggctgagcgtgaaagaggtg |
40034519 |
T |
|
| Q |
261 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcac |
360 |
Q |
| |
|
| ||||| || ||||| |||||||||||||||||||||| ||| |||||||||||||||| |||||||||||| ||||||||| ||||||||| | || |
|
|
| T |
40034520 |
ttacaattgatatttccatgtccaagtttgagacaaccaaataccactgcactctcattgacgcccccggacac--agatttcatcaagaacatgttaac |
40034617 |
T |
|
| Q |
361 |
tggaacatcccaagctgactgtgctgttctc |
391 |
Q |
| |
|
|| || |||| ||||||||||||||||||| |
|
|
| T |
40034618 |
cggcacgtccctagctgactgtgctgttctc |
40034648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 181; E-Value: 3e-97
Query Start/End: Original strand, 86 - 390
Target Start/End: Complemental strand, 3301370 - 3301066
Alignment:
| Q |
86 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaag |
185 |
Q |
| |
|
||||||||||||||||| |||||||||||||| | ||||| |||||||||||||||||||||||| | ||| || |||||| | ||||||||||||| |
|
|
| T |
3301370 |
attggtcatgtcgactccgggaagtcaaccaccaccggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
3301271 |
T |
|
| Q |
186 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
285 |
Q |
| |
|
| |||||||| |||| | |||||||||| |||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||| || |
|
|
| T |
3301270 |
ctgctgagatgaacaagcgttcattcaagtatgcttgggtgctcgacaagctcaaggctgaatgtgaaagaggtatcacaattgacattgctctgtggaa |
3301171 |
T |
|
| Q |
286 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgct |
385 |
Q |
| |
|
||||||||| || ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
3301170 |
gtttgagactactaagtactactgcactgtcattgatgcccccggacacagggatttcattaagaacatgattactggaacatcccaagctgattgtgct |
3301071 |
T |
|
| Q |
386 |
gttct |
390 |
Q |
| |
|
||||| |
|
|
| T |
3301070 |
gttct |
3301066 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 180; E-Value: 1e-96
Query Start/End: Original strand, 48 - 518
Target Start/End: Original strand, 45993099 - 45993563
Alignment:
| Q |
48 |
taatggataaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggagg |
147 |
Q |
| |
|
|||||||||| | ||||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||| |||||||||| ||| |||| |||||| | |
|
|
| T |
45993099 |
taatggataaggaaaaggttcctattagcattgtggttattggtcatgtcgactccgggaagtcaaccactactggtcatttcatccacaaacttggatg |
45993198 |
T |
|
| Q |
148 |
tattaaaaaggacgtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgag |
247 |
Q |
| |
|
|||| | ||| ||||| ||| | ||||||||||||| |||||||| | || | |||||||||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
45993199 |
tattcacaagagtgtcatcgagagtcttgagaaagaagctgctgagatgatcaagcgttcattcaagtatgcttgggtgcttgacaagctcaagactgag |
45993298 |
T |
|
| Q |
248 |
cgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcatta |
347 |
Q |
| |
|
|||||||||||||||||||| |||| |||| |||| ||||||||||||| ||||||| ||||||| ||||||||||| |||||||||| |||||||||| |
|
|
| T |
45993299 |
cgtgaaagaggtatcacaattgacagttctttgtcgaagtttgagacaaacaagtacagctgcactgtcattgatgcctccggacacagggatttcatta |
45993398 |
T |
|
| Q |
348 |
agaacatgatcactggaacatcccaagctgactgtgctgttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcg |
447 |
Q |
| |
|
||||||||||||| || || ||||||||||| |||||||||||| | |||||| |||||| ||| |||||| | | |||||| | || | | |
|
|
| T |
45993399 |
agaacatgatcaccgggacgtcccaagctgattgtgctgttctcatcattgattccactactcgtgg------ttttgaagccggtatttcaaaggatgg |
45993492 |
T |
|
| Q |
448 |
tcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
||||| |||||||||||| | || || ||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
45993493 |
tcagactcgtgaacatgctcttcttgccttcactcttggtgtgaatcaaatgatctgttgctgcaacaagg |
45993563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 81 - 391
Target Start/End: Original strand, 7888419 - 7888729
Alignment:
| Q |
81 |
tgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaa |
180 |
Q |
| |
|
|||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| | ||||||| |
|
|
| T |
7888419 |
tgtttattggtcatgttgattccgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattgaaaaggatgtcatcgagaaacttgagaa |
7888518 |
T |
|
| Q |
181 |
agaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctg |
280 |
Q |
| |
|
|||||| ||||||||||||| ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
7888519 |
agaagctgctgagataaacagacgtttattcaagtatgcttgggtgcttgacaaactcaaggctgagcgtgaaagaggtatcacaattgacatttctctt |
7888618 |
T |
|
| Q |
281 |
tccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgact |
380 |
Q |
| |
|
| |||||| ||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| || | || ||||||| | |
|
|
| T |
7888619 |
tggaagtttcagacaaccagctactgctgcactctcattgatgcccccggacacagggatttcatcaagaacatgatcaccggggcgtctgaagctgatt |
7888718 |
T |
|
| Q |
381 |
gtgctgttctc |
391 |
Q |
| |
|
||||||||||| |
|
|
| T |
7888719 |
gtgctgttctc |
7888729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 179; E-Value: 4e-96
Query Start/End: Original strand, 61 - 383
Target Start/End: Complemental strand, 51292280 - 51291959
Alignment:
| Q |
61 |
aaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggac |
160 |
Q |
| |
|
||||||| ||||||| ||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||| | ||| | |
|
|
| T |
51292280 |
aaaggttcgtattaacattgtgtttattggtcatgtcgactatggaaagtcaaatactgctggtcatttgatctacaagcttggaggtattgacaagaat |
51292181 |
T |
|
| Q |
161 |
gtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggta |
260 |
Q |
| |
|
| ||||||| || ||||||||||||| ||||||| |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
51292180 |
gacattgagagacttgagaaagaagctactgagatgaacatgcgttcattcacgtatgcttgggtgcttgacaagttcaaggctgagcgtgaaagaggta |
51292081 |
T |
|
| Q |
261 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcac |
360 |
Q |
| |
|
||||||| ||||||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||| | |
|
|
| T |
51292080 |
tcacaattgacatttctctatccaagtttga-acaatcaagtactattgcactctcattgatgcccccggacatgggaatttcattaagaacatgatcgc |
51291982 |
T |
|
| Q |
361 |
tggaacatcccaagctgactgtg |
383 |
Q |
| |
|
|| | | |||||||||||||| |
|
|
| T |
51291981 |
cgggccgttccaagctgactgtg |
51291959 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 171; E-Value: 3e-91
Query Start/End: Original strand, 161 - 518
Target Start/End: Complemental strand, 43045559 - 43045208
Alignment:
| Q |
161 |
gtcattgagcgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggta |
260 |
Q |
| |
|
||||||||| | |||||||||||||| |||||||| |||| | |||||||||| ||||| ||||| |||||||||||||||||||| ||||||||||||| |
|
|
| T |
43045559 |
gtcattgagaggtttgagaaagaagctgctgagatgaacaagcgttcattcaagtatgcctgggtccttgacaagctcaaggctgaacgtgaaagaggta |
43045460 |
T |
|
| Q |
261 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcac |
360 |
Q |
| |
|
|||| || |||||| |||| | |||||||||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
43045459 |
tcaccattgacattgctctctggaagtttgagacaaccaagtactactgcactgtcatcgatgcccccggacacagggatttcattaagaacatgatcac |
43045360 |
T |
|
| Q |
361 |
tggaacatcccaagctgactgtgctgttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcgtcagatccgtgaa |
460 |
Q |
| |
|
||||||||||||||||| ||||| |||||| | |||||| |||||| ||| |||||| | | |||||||| || | |||||| ||||||| |
|
|
| T |
43045359 |
cggaacatcccaagctgattgtgccgttctcatcattgattccactactggtgg------ttttgaagccggtatttctaaggatggtcagacccgtgaa |
43045266 |
T |
|
| Q |
461 |
catgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||| |||| |||||||| |||||||||||||||||||||||||| |||||||||| |
|
|
| T |
43045265 |
catgctctccttgctttcactcttggtgtgaagcaaatgatctgctgttgcaacaagg |
43045208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 159; E-Value: 4e-84
Query Start/End: Original strand, 716 - 954
Target Start/End: Original strand, 45983965 - 45984203
Alignment:
| Q |
716 |
ttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgaccaaat |
815 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| ||||||| ||||||||||||||| |||||||||| |
|
|
| T |
45983965 |
ttgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgattggtacaagggtccaacccttcttgaagctattgaccaaat |
45984064 |
T |
|
| Q |
816 |
caacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgttgag |
915 |
Q |
| |
|
||||||||||| ||||||||| ||||||||||| || ||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
45984065 |
caacgagcctatgaggccatcagacaagcctctcagaataccacttcaggatgtctacaagattggaggaatcggaactgtgcctgtgggacgtgttgag |
45984164 |
T |
|
| Q |
916 |
accggtgtcttgaaacctggaatgatggtgacttttgcc |
954 |
Q |
| |
|
|| ||| |||||| ||||||||| || ||||||||||| |
|
|
| T |
45984165 |
actggttccttgaaccctggaatggtgctgacttttgcc |
45984203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 608 - 956
Target Start/End: Complemental strand, 3300853 - 3300505
Alignment:
| Q |
608 |
agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggctataaccctnnnnn |
707 |
Q |
| |
|
|||||||||||||| |||| || ||||| ||| ||||||||||||| ||||||| | ||||| || |||| ||| | ||||||||||||| |
|
|
| T |
3300853 |
agatggatgccactacacctaagtactcgaagggtaggtatgaagaaattgtgaaggaagtttcatcctatttgaagaaggttggctataacccagacaa |
3300754 |
T |
|
| Q |
708 |
nnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctctt |
807 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | ||||||||||||||| ||||||| ||||||||||| |||||| |
|
|
| T |
3300753 |
aattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaatcttgactggtacaagggtcctacccttcttgaggctctt |
3300654 |
T |
|
| Q |
808 |
gaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggat |
907 |
Q |
| |
|
|||||||||||||||||||| ||||||||| ||||||| ||||| |||| |||| ||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
3300653 |
gaccaaatcaacgagcctaagaggccatcagacaagcccctccgtctaccgcttcaggatgtctacaagattggaggaattgggactgtgcctgtggggc |
3300554 |
T |
|
| Q |
908 |
gtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||| ||||| |||||| | |||||||||||| | || ||||||||||| |
|
|
| T |
3300553 |
gtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccc |
3300505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 150; E-Value: 9e-79
Query Start/End: Original strand, 719 - 956
Target Start/End: Complemental strand, 50912387 - 50912150
Alignment:
| Q |
719 |
ttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgaccaaatcaa |
818 |
Q |
| |
|
||||||||||||||||||||||||||||| | |||||||| ||| |||| |||||||||||| | |||||||||||| ||||||||||||| |||||||| |
|
|
| T |
50912387 |
ttcccatctctggttttgagggagataacatcattgagcgctctactaaccttgactggtacaaaggtcccacccttattgaagctcttgatcaaatcaa |
50912288 |
T |
|
| Q |
819 |
cgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgttgagacc |
918 |
Q |
| |
|
||||||||||| |||||| ||| |||||||||||||||||||| || ||||||||||||||||| |||||||| ||| ||||||||| || |||||||| |
|
|
| T |
50912287 |
ggagcctaatagaccatcacacatgcctctccgattaccacttcaggttgtctacaagattggagaaattggaattgtacctgtgggacgtattgagacc |
50912188 |
T |
|
| Q |
919 |
ggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
50912187 |
ggtgtcttgaaacgtggaatggtggtgacttttgcccc |
50912150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 595 - 956
Target Start/End: Complemental strand, 43045133 - 43044771
Alignment:
| Q |
595 |
catctatcttgat-agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggc |
693 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||| ||||||||| ||| ||||| ||| ||||||| | ||||| || |||| ||| | ||||| |
|
|
| T |
43045133 |
catctatcttgaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggc |
43045034 |
T |
|
| Q |
694 |
tataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccc |
793 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || |||||||||||| ||||||| |||| |
|
|
| T |
43045033 |
tataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaaccc |
43044934 |
T |
|
| Q |
794 |
ttcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaac |
893 |
Q |
| |
|
||||||| || |||||||||||||| |||||||| ||||| ||| ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43044933 |
ttcttgaggcccttgaccaaatcaatgagcctaagaggccttcagacaagcccctccgactaccacttcaggatgtctacaagattggaggaattggaac |
43044834 |
T |
|
| Q |
894 |
tgtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||||||||||| |||| ||||| |||||| | |||||||||||| | || ||||||||||| |
|
|
| T |
43044833 |
tgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccc |
43044771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 595 - 956
Target Start/End: Original strand, 43066858 - 43067220
Alignment:
| Q |
595 |
catctatcttgat-agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggc |
693 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||| ||||||||| ||| ||||| ||| ||||||| | ||||| || |||| ||| | ||||| |
|
|
| T |
43066858 |
catctatcttgaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggc |
43066957 |
T |
|
| Q |
694 |
tataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccc |
793 |
Q |
| |
|
|||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || |||||||||||| ||||||| |||| |
|
|
| T |
43066958 |
tataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaaccc |
43067057 |
T |
|
| Q |
794 |
ttcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaac |
893 |
Q |
| |
|
||||||| || ||||||||||||||||||||||| ||||| ||| ||||||| |||||| ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
43067058 |
ttcttgaggcccttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaac |
43067157 |
T |
|
| Q |
894 |
tgtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||||||||||| |||| ||||| |||||| | |||||||||||| | || ||||||||||| |
|
|
| T |
43067158 |
tgtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttgtcacttttgcccc |
43067220 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 141; E-Value: 2e-73
Query Start/End: Original strand, 596 - 956
Target Start/End: Complemental strand, 43083976 - 43083615
Alignment:
| Q |
596 |
atctatcttgat-agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
||||||||||| |||||||||| ||| ||||||| ||||||||| ||| ||||| ||| ||||||| | ||||| || |||| ||| | |||||| |
|
|
| T |
43083976 |
atctatcttgaacagatggatgctactacacccaagtactccaagggtagatatgatgaaattgtgaaggaagtttcatcctatttgaagaaggttggct |
43083877 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || |||||||||||| ||||||| ||||| |
|
|
| T |
43083876 |
ataacccagacaaaattccatttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttgactggtacaagggtccaaccct |
43083777 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
|||||| || ||||||||||||||||||||||| ||||| ||| ||||||| |||||| ||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
43083776 |
tcttgaggcacttgaccaaatcaacgagcctaagaggccttcagacaagcccctccgactaccacttcaagatgtctacaagattggaggaattggaact |
43083677 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
||||||||||| |||| ||||| |||||| | |||||||||||| | | ||||||||||| |
|
|
| T |
43083676 |
gtgcctgtggggcgtgtcgagactggtgtcataaaacctggaatggttatcacttttgcccc |
43083615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 111; E-Value: 2e-55
Query Start/End: Original strand, 713 - 956
Target Start/End: Original strand, 43076832 - 43077067
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||| | || ||| |||||||| ||||||| |||||||||| || |||||||| |
|
|
| T |
43076832 |
catttgttcccatctctggttttgagggagataacatgatcgagcgctctacaaaccttaactggtacaagggtccaacccttcttggggcccttgacca |
43076931 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
||||||||||||||| ||||| ||| |||||| |||||| ||| ||||||||||| || |||||||||||||||| ||||||| | ||||| |
|
|
| T |
43076932 |
aatcaacgagcctaagaggccttcagacaagcacctccgactac--------aatgtctacaagtttagaggaattggaactgtacctgtggcacgtgtt |
43077023 |
T |
|
| Q |
913 |
gagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
||||| ||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
43077024 |
gagactggtgtcttgaaacctggaatggtggtgacttttgcccc |
43077067 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 608 - 956
Target Start/End: Original strand, 7891113 - 7891461
Alignment:
| Q |
608 |
agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttg-gagaggattggctataaccctnnnn |
706 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| ||||||||||| || |||||| |||||| ||||||| | |||| |||||||||||| |
|
|
| T |
7891113 |
agatggatgccactacacccaaatactccaaggataggtatgaacaaattgtgagtcaaatttcaccctttttgagtgagg-ttggctataacctaggta |
7891211 |
T |
|
| Q |
707 |
nnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctct |
806 |
Q |
| |
|
|| | ||| | || |||||||||| |||||||||||| | |||||||| |||||||| ||||| |||||| |||||||||||||||||||||||| |
|
|
| T |
7891212 |
aaattccttttatccctatctctggttacgagggagataacatcattgagcgctcttctaaccttgattggtacacgggtcccacccttcttgaagctct |
7891311 |
T |
|
| Q |
807 |
tgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtggga |
906 |
Q |
| |
|
||||||| ||| |||||| ||| | | || |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
7891312 |
tgaccaattcagaaggcctaagaggttaatattcaggcctctccgattaccacttcaagatgtctacaagattggaggaattggaattgtgcctgtggga |
7891411 |
T |
|
| Q |
907 |
tgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
| |||||| | ||| ||||||||||||||||| || ||||||||||||| |
|
|
| T |
7891412 |
cgcgttgagtctggtatcttgaaacctggaatggtgctgacttttgcccc |
7891461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 73; E-Value: 8e-33
Query Start/End: Original strand, 595 - 956
Target Start/End: Original strand, 40034841 - 40035202
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
|||||||||||| |||||||||| ||| ||||||||||||| ||| ||||| ||||||| |||||| ||| || | | ||||| | | |||||| |
|
|
| T |
40034841 |
catctatcttgacagatggatgcaactacacccaaatactctaagggtaggtttgaagaacttgtgacgaatttctccccccttttgatcaaggttggct |
40034940 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
|||||| || ||||| ||||||| |||||||||| ||||| ||| | |||||||| ||| |||| ||||| |||||| | ||||||||||| |
|
|
| T |
40034941 |
ataacctatctgacattccatttattcccatatctggttttgttggagaaaacatcattgagcgctctactaaccttgattggtacaaaggtcccaccct |
40035040 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
| |||||||| | ||||||||||| | || || ||||||||| | |||||||||||||||||| | | | ||| |||| |||||||||||||||| |
|
|
| T |
40035041 |
ttttgaagctatcgaccaaatcaaagtaccgaagaggccatcagataagcctctccgattaccaatccagtctgtttacatgattggaggaattggagtc |
40035140 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||||||| || ||||| ||| |||||||||||||| |||||| |||||||||||||| |
|
|
| T |
40035141 |
gtgcctgttggtcgtgttatgactggtgtcttgaaaccaggaatggctgtgacttttgcccc |
40035202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 205 - 390
Target Start/End: Original strand, 43076553 - 43076737
Alignment:
| Q |
205 |
ttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaagtttgagacaaccaagtac |
304 |
Q |
| |
|
|||| |||| ||||| ||| | ||||||||||||| |||||| |||||||||||||| || || || |||||||| | |||||||||||||| ||| || |
|
|
| T |
43076553 |
ttcagtcaagtatgcctggatccttgacaagctcagggctgaacgtgaaagaggtat-accattgagatttctctctggaagtttgagacaacaaagaac |
43076651 |
T |
|
| Q |
305 |
tactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgctgttct |
390 |
Q |
| |
|
| |||| | ||||||||| ||| ||||||| ||||||||||||||||||||||||| || ||||||||||| |||||| |||| |
|
|
| T |
43076652 |
tgctgcgttgtcattgatgtcccgggacacaagaatttcattaagaacatgatcactgggacgtcccaagctgattgtgctcttct |
43076737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 447 - 518
Target Start/End: Original strand, 45983706 - 45983777
Alignment:
| Q |
447 |
gtcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||| ||||||||||||| | || || ||||| ||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
45983706 |
gtcagacccgtgaacatgctcttcttgccttcactcttggtgtgaatcaaatgatctgctgctgcaacaagg |
45983777 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 518
Target Start/End: Original strand, 40034727 - 40034763
Alignment:
| Q |
482 |
cttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
40034727 |
cttggtgtgaatcaaatgatctgctgctgcaacaagg |
40034763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 608 - 662
Target Start/End: Original strand, 7888848 - 7888902
Alignment:
| Q |
608 |
agatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaa |
662 |
Q |
| |
|
|||||||||||||| |||||| ||||||| || | |||||||||||| ||||||| |
|
|
| T |
7888848 |
agatggatgccactacacccatatactcctaggacaggtatgaagaaattgtgaa |
7888902 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 601 - 659
Target Start/End: Complemental strand, 50912508 - 50912450
Alignment:
| Q |
601 |
tcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgt |
659 |
Q |
| |
|
|||||| |||||||||| ||| | ||||||||||||||| ||||||||||||| |||| |
|
|
| T |
50912508 |
tcttgacagatggatgctactactcccaaatactccaagggtaggtatgaagaaattgt |
50912450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 518
Target Start/End: Complemental strand, 3301013 - 3300945
Alignment:
| Q |
449 |
cagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||| ||||||||| ||| | || |||||||| |||||||||||||||||||| | ||||||||||||| |
|
|
| T |
3301013 |
cagacccgtgaacacgctcttcttgctttcactcttggtgtgaagcaaatgat-ttttgctgcaacaagg |
3300945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 198; Significance: 1e-107; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 86 - 518
Target Start/End: Complemental strand, 4232107 - 4231681
Alignment:
| Q |
86 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaag |
185 |
Q |
| |
|
||||| ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| | ||| || |||||| | ||||||||||||| |
|
|
| T |
4232107 |
attggccatgtcgactctgggaagtcaactaccactggtcacttgatctacaagcttggaggtattgacaagcgtgtgattgagaggtttgagaaagaag |
4232008 |
T |
|
| Q |
186 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
285 |
Q |
| |
|
| |||||||| |||| | ||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| || |
|
|
| T |
4232007 |
ctgctgagatgaacaagcgttcatttaagtatgcttgggttcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacattgctctgtggaa |
4231908 |
T |
|
| Q |
286 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgct |
385 |
Q |
| |
|
||||||||| || ||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||| |||||||||||||| |||||| |
|
|
| T |
4231907 |
gtttgagaccactaagtactactgcactgtcattgatgcccctggacacagggatttcattaagaacatgattactggtacatcccaagctgattgtgct |
4231808 |
T |
|
| Q |
386 |
gttctcgtatatgattctactactattggatctgactttgaaactgctatttctagggttcgtcagatccgtgaacatgctgtcctcgctttcacccttg |
485 |
Q |
| |
|
|||||| | |||||| || ||| ||| |||||| ||| |||||| | || | |||||| |||||||||||| |||| |||||||| |||| |
|
|
| T |
4231807 |
gttctcatcattgattccaccactggtgg------ttttgaagctggtatttccaaggatggtcagactcgtgaacatgctctccttgctttcactcttg |
4231714 |
T |
|
| Q |
486 |
gtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| |
|
|
| T |
4231713 |
gtgtgaggcaaatgatctgctgctgcaacaagg |
4231681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 713 - 953
Target Start/End: Complemental strand, 4231479 - 4231239
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||| ||| | ||||||||||||||| ||||||| || |||||||| |||||||| || |
|
|
| T |
4231479 |
catttgttcccatctctggttttgagggagataacatgattgagcgctctacaaatcttgactggtacaagggtccaacacttcttgaggctcttgatca |
4231380 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
|||||| |||||||| ||||||||| ||||||| |||||| |||| |||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
4231379 |
aatcaatgagcctaagaggccatcagacaagcccctccgactacctcttcaggatgtctacaagattggaggaattggaactgttcctgtgggacgtgtt |
4231280 |
T |
|
| Q |
913 |
gagaccggtgtcttgaaacctggaatgatggtgacttttgc |
953 |
Q |
| |
|
||||| ||| | |||||||||||||| ||||||||||||| |
|
|
| T |
4231279 |
gagactggtaccatgaaacctggaatggtggtgacttttgc |
4231239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 19964623 - 19964696
Alignment:
| Q |
72 |
ttaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttgga |
145 |
Q |
| |
|
|||| |||||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||| ||||||||||| |
|
|
| T |
19964623 |
ttaacattgtggttattggtcatgttgactctgggaagtcaaccactactggtcacttgatccacaagcttgga |
19964696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 723 - 812
Target Start/End: Original strand, 19964822 - 19964911
Alignment:
| Q |
723 |
catctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
|||||||||||||||| ||||||||||| |||||| ||| |||| |||| ||||||| |||||||||||| | |||||||||||||| |
|
|
| T |
19964822 |
catctctggttttgagcgagataacttggttgagccctctactaaccttggtaggtacgacggtcccacccttatcgaagctcttgacca |
19964911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 869 - 956
Target Start/End: Original strand, 19964974 - 19965061
Alignment:
| Q |
869 |
tctacaagattggaggaattggaactgtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|||||||| |||||||||| |||| ||||||||||||| || ||| ||| ||| ||||| |||||| ||| || ||| ||||||||| |
|
|
| T |
19964974 |
tctacaaggttggaggaatcggaaatgtgcctgtgggacgtattgtgactggttacttgacacctgggatggtgatgaattttgcccc |
19965061 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 77 - 410
Target Start/End: Complemental strand, 34691474 - 34691143
Alignment:
| Q |
77 |
attgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttg |
176 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||| ||||| | ||||||| | ||| |
|
|
| T |
34691474 |
attgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagtgccattgaggcacttg |
34691375 |
T |
|
| Q |
177 |
agaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttc |
276 |
Q |
| |
|
||||||||| |||||||| || | | |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
34691374 |
ggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggtatcacaattgacatttc |
34691275 |
T |
|
| Q |
277 |
tctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagct |
376 |
Q |
| |
|
| || ||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
34691274 |
tatg--caagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcaccgggacctcccaagct |
34691177 |
T |
|
| Q |
377 |
gactgtgctgttctcgtatatgattctactacta |
410 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| |
|
|
| T |
34691176 |
gactgtgctgttctcgtcattgattcgactacta |
34691143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 77 - 410
Target Start/End: Complemental strand, 34713886 - 34713555
Alignment:
| Q |
77 |
attgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttg |
176 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||| || |||||||||||||| |||||||||||||||||| ||||| | ||||||| | ||| |
|
|
| T |
34713886 |
attgtgtttattggtcatgtcaactctgggaagtcaactacggctggtcatttgatttacaagcttggaggtattgaaaagagtgccattgaggcacttg |
34713787 |
T |
|
| Q |
177 |
agaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttc |
276 |
Q |
| |
|
||||||||| |||||||| || | | |||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| |
|
|
| T |
34713786 |
ggaaagaagctgctgagatgaagaagcgttcattcaagtatgcttgggtgcttgacaagctcaacgctgagcgtgaaagaggtatcacaattgacatttc |
34713687 |
T |
|
| Q |
277 |
tctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagct |
376 |
Q |
| |
|
| || ||||||||||||||||||||||| || ||||||||||||||| ||||||||||| ||||||||||||||||||||||| || || ||||||||| |
|
|
| T |
34713686 |
tatg--caagtttgagacaaccaagtactgcttcactctcattgatgctcccggacacagggatttcattaagaacatgatcaccgggacctcccaagct |
34713589 |
T |
|
| Q |
377 |
gactgtgctgttctcgtatatgattctactacta |
410 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| |
|
|
| T |
34713588 |
gactgtgctgttctcgtcattgattcgactacta |
34713555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 165; E-Value: 1e-87
Query Start/End: Original strand, 77 - 390
Target Start/End: Complemental strand, 16232823 - 16232506
Alignment:
| Q |
77 |
attgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttg |
176 |
Q |
| |
|
||||| ||||||||||||||| | |||||||||||||| ||||| ||||||||| | |||||||||||||||||| ||||| | ||||||| | ||| |
|
|
| T |
16232823 |
attgtctttattggtcatgtcaattctgggaagtcaactactgccggtcatttgctttacaagcttggaggtattcaaaagagtgccattgaggcacttg |
16232724 |
T |
|
| Q |
177 |
agaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttc |
276 |
Q |
| |
|
||||||||| |||||||| || ||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
16232723 |
ggaaagaagctgctgagatgaagatgcgttcattcaagtatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaattgacatttc |
16232624 |
T |
|
| Q |
277 |
tctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttca----ttaagaacatgatcactggaacatccca |
372 |
Q |
| |
|
||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| || || ||| | |
|
|
| T |
16232623 |
catgtgcaagtttgagacaaccaagtactgttgcaccctcattgatgcccccggacacagggatttcattaattaagaacatgatcatcgggacctccga |
16232524 |
T |
|
| Q |
373 |
agctgactgtgctgttct |
390 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
16232523 |
agctgactgtgctgttct |
16232506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 595 - 956
Target Start/End: Complemental strand, 34690978 - 34690617
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
|||||||||| |||||||||||| | ||||||||||||||||| ||||||||||| | ||||||| || |||||| | |||| ||||||||| | |
|
|
| T |
34690978 |
catctatcttcgcagatggatgccattacacccaaatactccaaggataggtatgaactaattgtgaagggaatttcacccgctttgatgaggattggtt |
34690879 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
||||| | || ||||||||||||||||||||| | ||||||||||| | |||||||| || |||| |||||||||||||| ||||| ||||| |
|
|
| T |
34690878 |
ataacacagataaaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcctaccct |
34690779 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||| ||||||| | || ||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
34690778 |
tcttgaagctcttgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgttggaact |
34690679 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|| ||||| ||| |||||||||| ||||| ||||||||||||||| || ||||||||||||| |
|
|
| T |
34690678 |
gtacctgtcggacgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgcccc |
34690617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 595 - 956
Target Start/End: Complemental strand, 34713390 - 34713029
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
|||||||||| |||||||||||| | ||||||||||||||||| ||||||||||| | ||||||| || |||||| | |||| ||||||||| | |
|
|
| T |
34713390 |
catctatcttcgcagatggatgccattacacccaaatactccaaggataggtatgaactaattgtgaagggaatttcacccgctttgatgaggattggtt |
34713291 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
||||| | || ||||||||||||||||||||| | ||||||||||| | |||||||| || |||| |||||||||||||| ||||| ||||| |
|
|
| T |
34713290 |
ataacacagataaaattccatttgttcccatctctggttataagggagataacatcattgagcgctcgactaaccttgactggtacgaaggtcctaccct |
34713191 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| ||||| ||| ||||||| | || ||||||||| ||||||||||||||||||| |||||||| |
|
|
| T |
34713190 |
tcttgaagctcttgaccaaatcgacgagcctaagaggccttcaggcaagcctttgagactaccacttcaacatgtctacaagattggaggtgttggaact |
34713091 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|| ||||| ||| |||||||||| ||||| ||||||||||||||| || ||||||||||||| |
|
|
| T |
34713090 |
gtacctgtcggacgtgttgagactggtgtgttgaaacctggaatggtgctgacttttgcccc |
34713029 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 595 - 956
Target Start/End: Complemental strand, 16232319 - 16231958
Alignment:
| Q |
595 |
catctatcttgatagatggatgccactgcacccaaatactccaagtataggtatgaagaatttgtgaaaggtttttcacactttttggagaggattggct |
694 |
Q |
| |
|
|||||||||| | ||||| |||||||| |||| |||||||||||| | || ||||||| | ||||||| || |||||| | |||| ||||||||| | |
|
|
| T |
16232319 |
catctatcttcacagatgaatgccactacaccgaaatactccaaggacagatatgaagtaattgtgaagggagtttcacccgctttgacgaggattggtt |
16232220 |
T |
|
| Q |
695 |
ataaccctnnnnnnnttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccaccct |
794 |
Q |
| |
|
||||| || || ||||||||||||||||||||||| || |||||||| | ||||||| ||| |||| ||||||||||| || || || ||||| |
|
|
| T |
16232219 |
ataacgctgatgatattccatttgttcccatctctggttttaagtgagataacatcgttgagcgctctactaaccttgactggtatgatgggcctaccct |
16232120 |
T |
|
| Q |
795 |
tcttgaagctcttgaccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaact |
894 |
Q |
| |
|
| |||||||| |||||||||||| ||||||||| ||||| | ||||||||| ||| | || |||| | ||||||||||||||||||| ||||||||| |
|
|
| T |
16232119 |
tgttgaagctattgaccaaatcagcgagcctaagaggcccgaaggcaagcctctgcgacttccccttcagcatgtctacaagattggaggtattggaact |
16232020 |
T |
|
| Q |
895 |
gtgcctgtgggatgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|| ||||||||| |||||||||| || || || || || |||||| | ||||||||||||| |
|
|
| T |
16232019 |
gtacctgtgggacgtgttgagactggggtattaaagcccggaatggtactgacttttgcccc |
16231958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 70 - 370
Target Start/End: Complemental strand, 33861495 - 33861192
Alignment:
| Q |
70 |
tattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgag |
169 |
Q |
| |
|
|||||| |||||| ||||||||||||| |||||||||||||||||||| | ||||||||| || ||||||||||| ||||| | ||| | |||||||| |
|
|
| T |
33861495 |
tattaacattgtggttattggtcatgttgactctgggaagtcaaccacaaccggtcatttgctccacaagcttggatgtattgacaagcatgtcattgac |
33861396 |
T |
|
| Q |
170 |
cgatttgagaaagaagccgctgagataaacatgtgttcattcaaatatgc---ttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaa |
266 |
Q |
| |
|
| ||||| ||||||| ||| |||| ||| |||||||||||| ||||| |||||| |||||||||||| ||||||||||||||||||||||| | | |
|
|
| T |
33861395 |
agtcttgaggaagaagctgctcagatcgacaagtgttcattcaagtatgctaattgggttcttgacaagctcgaggctgagcgtgaaagaggtatctcca |
33861296 |
T |
|
| Q |
267 |
tcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaac |
366 |
Q |
| |
|
| ||| ||||| || || |||||||||| | ||||| | |||| ||||||||||||| |||||||| |||| |||||||||||||| | ||| || |
|
|
| T |
33861295 |
ttgacgtttctatgcgtaattttgagacaaaccagtaccggtacactgtcattgatgcccctggacacagggattatattaagaacatgattaatgggac |
33861196 |
T |
|
| Q |
367 |
atcc |
370 |
Q |
| |
|
|||| |
|
|
| T |
33861195 |
atcc |
33861192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 713 - 956
Target Start/End: Complemental strand, 33860855 - 33860605
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
33860855 |
catttgttcccatctctggttttgagggagataacttgattgagcgctctactaatcttgactggtacaagggtcccacccttcttgaagctcttgaccg |
33860756 |
T |
|
| Q |
813 |
aatcaacgagc------ctaataggccatcaaacaagcctctccgattaccacttcgggatgtctac-aagattggaggaattggaactgtgcctgtggg |
905 |
Q |
| |
|
||| | || || |||| || ||| ||||||||| ||||||||| | ||||||| |||||||||||||| |||| ||||| ||| || |
|
|
| T |
33860755 |
tatctaattgcctctgtctgcgaggctatttctcaatcctctccgaataccacttcatggtgtctacaaagattggaggaatcggaaatgtgcatgtagg |
33860656 |
T |
|
| Q |
906 |
atgtgttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
| |||||| ||| ||| |||||||||||||||| ||||||||||||||| |
|
|
| T |
33860655 |
acgtgttgtgactggtcacttgaaacctggaatggcggtgacttttgcccc |
33860605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 34691101 - 34691041
Alignment:
| Q |
458 |
gaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
||||||||| | || || ||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34691101 |
gaacatgctcttcttgccttcactcttggtgtgaggcaaatgatctgctgctgcaacaagg |
34691041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 458 - 518
Target Start/End: Complemental strand, 34713513 - 34713453
Alignment:
| Q |
458 |
gaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
||||||||| | || || ||||| |||||||||| |||||||||||||||||||||||||| |
|
|
| T |
34713513 |
gaacatgctcttcttgccttcactcttggtgtgaggcaaatgatctgctgctgcaacaagg |
34713453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 482 - 518
Target Start/End: Complemental strand, 16232420 - 16232384
Alignment:
| Q |
482 |
cttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| |
|
|
| T |
16232420 |
cttggtgtgaggcaaatgatctgctgctgcaacaagg |
16232384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 143; Significance: 1e-74; HSPs: 4)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 710 - 956
Target Start/End: Complemental strand, 16349164 - 16348918
Alignment:
| Q |
710 |
ttacatttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttga |
809 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||| ||| | || ||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
16349164 |
ttacatttgttcccatctctggttttgagggagataacttggttgagccctctacaaaacttgatgggtacaagggtcccacccttcttgaagctcttga |
16349065 |
T |
|
| Q |
810 |
ccaaatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgt |
909 |
Q |
| |
|
|| ||||||||||||||| |||| |||| |||||||||||||||||||||||| || ||||||||||||||||||||||||| || || ||| |||||| |
|
|
| T |
16349064 |
ccgaatcaacgagcctaagaggctatcagacaagcctctccgattaccacttcagggtgtctacaagattggaggaattggagctttggctgcaggatgt |
16348965 |
T |
|
| Q |
910 |
gttgagaccggtgtcttgaaacctggaatgatggtgacttttgcccc |
956 |
Q |
| |
|
|| ||| ||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
16348964 |
gtcaggactggtgtcttgaaacctggaatggtggtgactttttcccc |
16348918 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 174 - 390
Target Start/End: Complemental strand, 16349691 - 16349475
Alignment:
| Q |
174 |
ttgagaaagaagccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacat |
273 |
Q |
| |
|
||||||| |||| |||||| |||||| | ||| ||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
16349691 |
ttgagaataaagctgctgagttaaacaaggattctttcaagtatgcgtgggttcttgacaaactcaaggctgagcgcgaaagaggtatcacaattgacaa |
16349592 |
T |
|
| Q |
274 |
ttctctgtccaagtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaa |
373 |
Q |
| |
|
|||| ||| || |||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
16349591 |
ttctatgttgaattttgagacaaccaagtaccgctgcactatcattgatgcccccggacacagggatttcattaagaacatgattactgggacatcccaa |
16349492 |
T |
|
| Q |
374 |
gctgactgtgctgttct |
390 |
Q |
| |
|
||||| |||||| |||| |
|
|
| T |
16349491 |
gctgattgtgctcttct |
16349475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 16352298 - 16352207
Alignment:
| Q |
56 |
aaaggaaaggttggtattaatattgtgtttattggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggagg |
147 |
Q |
| |
|
|||| ||||||| |||||| |||||| |||||||||||||| ||||||||||||||||||| || ||||||||| |||||||||||||||| |
|
|
| T |
16352298 |
aaagaaaaggttcatattaacattgtggttattggtcatgtcaactctgggaagtcaaccaccgccggtcatttgttctacaagcttggagg |
16352207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 447 - 518
Target Start/End: Complemental strand, 16349424 - 16349353
Alignment:
| Q |
447 |
gtcagatccgtgaacatgctgtcctcgctttcacccttggtgtgaagcaaatgatctgctgctgcaacaagg |
518 |
Q |
| |
|
|||||||||||||||||||| ||| |||| | | |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
16349424 |
gtcagatccgtgaacatgctctccatgcttactctcttggtgtcaagcaaatgatctgctgctgcaacaagg |
16349353 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 107; Significance: 4e-53; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 86 - 384
Target Start/End: Original strand, 7528735 - 7529033
Alignment:
| Q |
86 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaag |
185 |
Q |
| |
|
||||| |||||||||||||| || ||||| || ||||||| |||||||||||||| ||||||||| | ||| || || ||| |||||||||| |||| |
|
|
| T |
7528735 |
attggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagcgtgtgatcgagagatttgagaaggaag |
7528834 |
T |
|
| Q |
186 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
285 |
Q |
| |
|
| |||||||| |||| | |||||||||| ||||| ||||| |||||||| || |||||||||||||||||||| || || ||||| ||| | ||| || |
|
|
| T |
7528835 |
ctgctgagatgaacaagcgttcattcaagtatgcatgggttcttgacaaacttaaggctgagcgtgaaagaggaattaccatcgatattgccttgtggaa |
7528934 |
T |
|
| Q |
286 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgc |
384 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||| |||||||| | |||||||| ||||||||||| |||||||| ||||| ||||| ||||| |
|
|
| T |
7528935 |
atttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaagaacatgattactggaacctcccaggctgattgtgc |
7529033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 86 - 387
Target Start/End: Original strand, 7519364 - 7519665
Alignment:
| Q |
86 |
attggtcatgtcgactctgggaagtcaaccactgctggtcatttgatctacaagcttggaggtattaaaaaggacgtcattgagcgatttgagaaagaag |
185 |
Q |
| |
|
||||| |||||||||||||| || ||||| || ||||||| |||||||||||||| ||||||||| | ||| || || ||| |||| ||||| |||| |
|
|
| T |
7519364 |
attggacatgtcgactctggaaaatcaacaacaactggtcacttgatctacaagctaggaggtattgacaagcgtgtgatcgagagattcgagaaggaag |
7519463 |
T |
|
| Q |
186 |
ccgctgagataaacatgtgttcattcaaatatgcttgggtgcttgacaagctcaaggctgagcgtgaaagaggtatcacaatcgacatttctctgtccaa |
285 |
Q |
| |
|
| |||||||| |||| | | || ||||| || || ||||| ||||||||||| |||||||||||||||||||| || || || || ||| || ||| || |
|
|
| T |
7519464 |
ctgctgagatgaacaagaggtctttcaagtacgcatgggttcttgacaagcttaaggctgagcgtgaaagaggaattaccattgatattgctttgtggaa |
7519563 |
T |
|
| Q |
286 |
gtttgagacaaccaagtactactgcactctcattgatgcccccggacacagagatttcattaagaacatgatcactggaacatcccaagctgactgtgct |
385 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||||| |||||||| | |||||||| ||||||||||| |||||||| ||||| ||||| |||||| |
|
|
| T |
7519564 |
atttgagaccaccaagtactactgcacagtcattgatgctcccggacatcgtgatttcatcaagaacatgattactggaacctcccaggctgattgtgct |
7519663 |
T |
|
| Q |
386 |
gt |
387 |
Q |
| |
|
|| |
|
|
| T |
7519664 |
gt |
7519665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 713 - 921
Target Start/End: Original strand, 7519988 - 7520196
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
|||||||||| |||||||||||||| || || ||| |||||||| | ||| | || |||||||||||| |||| || || || ||||| ||||||||||| |
|
|
| T |
7519988 |
catttgttccaatctctggttttgaaggtgacaacatgattgagaggtctaccaaccttgactggtacaagggaccaactctccttgaggctcttgacca |
7520087 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
||||||||||| || || || || ||||||| ||| | | ||| | | ||||| ||||||||||| || |||||||||||||| || ||| ||||| |
|
|
| T |
7520088 |
gatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagttggacgtgtt |
7520187 |
T |
|
| Q |
913 |
gagaccggt |
921 |
Q |
| |
|
||||||||| |
|
|
| T |
7520188 |
gagaccggt |
7520196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 713 - 921
Target Start/End: Original strand, 7529525 - 7529733
Alignment:
| Q |
713 |
catttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaagctcttgacca |
812 |
Q |
| |
|
|||||||||||||||| || ||||| || || ||| |||||||| | || | || |||||||||||| |||| || || || ||||| ||||||||||| |
|
|
| T |
7529525 |
catttgttcccatctccggatttgaaggtgacaacatgattgagaggtccaccaaccttgactggtacaagggaccaactctccttgaggctcttgacca |
7529624 |
T |
|
| Q |
813 |
aatcaacgagcctaataggccatcaaacaagcctctccgattaccacttcgggatgtctacaagattggaggaattggaactgtgcctgtgggatgtgtt |
912 |
Q |
| |
|
||||||||||| || || || || ||||||| ||| | | ||| | | ||||| ||||||||||| || |||||||||||||| || ||| ||||| |
|
|
| T |
7529625 |
gatcaacgagcccaagagacccacagacaagcccctcaggcttccattgcaagatgtttacaagattggtggtattggaactgtgccagtcggacgtgtt |
7529724 |
T |
|
| Q |
913 |
gagaccggt |
921 |
Q |
| |
|
||||||||| |
|
|
| T |
7529725 |
gagaccggt |
7529733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 64; Significance: 2e-27; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 714 - 826
Target Start/End: Original strand, 39242536 - 39242650
Alignment:
| Q |
714 |
atttgttcccatctctggttttgagggagataacttgattgagcgttcttctaatcttgactggtacgagggtcccacccttcttgaa--gctcttgacc |
811 |
Q |
| |
|
|||||||||||||||||||||| | |||||||||||||||||||| ||| ||||| ||||||||||| | ||||||||||||||||| |||||||||| |
|
|
| T |
39242536 |
atttgttcccatctctggttttaacggagataacttgattgagcgctctactaatattgactggtacaacagtcccacccttcttgaagcgctcttgacc |
39242635 |
T |
|
| Q |
812 |
aaatcaacgagccta |
826 |
Q |
| |
|
| |||||||||||| |
|
|
| T |
39242636 |
gattcaacgagccta |
39242650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 261 - 323
Target Start/End: Original strand, 39242152 - 39242214
Alignment:
| Q |
261 |
tcacaatcgacatttctctgtccaagtttgagacaaccaagtactactgcactctcattgatg |
323 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
39242152 |
tcacaattgacattgctctgtccaagtttgagacaacaaagtactactgcactgtcattgatg |
39242214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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