View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4861_low_7 (Length: 239)
Name: NF4861_low_7
Description: NF4861
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4861_low_7 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 206; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 18 - 239
Target Start/End: Complemental strand, 29089879 - 29089658
Alignment:
| Q |
18 |
aatttgatttaccatgttcgtgcatgtactgatttggttaacatttctaaaattttagataggacacacatattcatgttgatgctggtagtggtgactt |
117 |
Q |
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| T |
29089879 |
aatttgatttaccatgttcgtgcatatactgatttggttaacatttctaaaattttagataggacacacatattcatgttgatgctggtagtggtgactt |
29089780 |
T |
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| Q |
118 |
tattgttaatttcctatgtccagagctatataatatgatttcagactcctattgatgaagagcttgaatgtaaatggccacaagtatgaccttgaccttg |
217 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
29089779 |
tattgttaatttcctatgaccagagctatataatatgatttcagactcctattggtgaagagcttgaatgtaaatggccacaagtatggccttgaccttg |
29089680 |
T |
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| Q |
218 |
tttttatgctgtcattggtttg |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
29089679 |
tttttatgctgtcattggtttg |
29089658 |
T |
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