View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4862-Insertion-7 (Length: 566)

Name: NF4862-Insertion-7
Description: NF4862
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4862-Insertion-7
NF4862-Insertion-7
[»] chr7 (1 HSPs)
chr7 (7-566)||(31862056-31862620)


Alignment Details
Target: chr7 (Bit Score: 464; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 464; E-Value: 0
Query Start/End: Original strand, 7 - 566
Target Start/End: Original strand, 31862056 - 31862620
Alignment:
Q  7 atctataatactagtaattgttatgaaaattggaaaatat----cttgtagaagatttgcaacata--aaaccaaaccaaattatatacattagagaaat 100  Q
    ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||    
T  31862056 atctataatactagtaattgttatgaaaattggaaaatatatatcttgtagaagatttgcaacatataaaaccaaaccaaattata--cattagagaaat 31862153  T
Q  101 agctaatgaaatatagtcataacataactatttaatttatcaagtctcattttatttaccacactgttacattacagaaaactttgtaaagcctaactta 200  Q
    |||||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31862154 agctaatgaaatatagtcttaacataactatttaatctattaagtctcattttatttaccacactgttacattacagaaaactttgtaaagcctaactta 31862253  T
Q  201 gaatactaaatagtagatgaacgctttggatattagcaagtgttgtctattcccaaggtgcatttgaaacattgtactatgaagcatggggaaaatacaa 300  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  31862254 gaatactaaatagtagatgaacgctttcgacattagcaagtgttgtctattcccaaggtgcatttgaaacattg---tatgaagcatggggaaaatacaa 31862350  T
Q  301 gtatattgttgaggaagggtccaaatcacatagtaaaatacagttgcgatacatgcattttgatgtgttaactgttttttgaagtatgtcttgttaatgg 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31862351 gtatattgttgaggaagggtccaaatcacatagtaaaatacagttgcgatacatgcattttgatgtgttaactgttttttgaagtatgtcttgttaatgg 31862450  T
Q  401 attgatacgtgcatgcttggttgatcgtagtcacaaaagtacaatgtcagaatttt----tcttgtaaatatttttgaataaaagccttccacgtgttac 496  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||  ||||||    ||||||||||||||||||||||||||||||||||||||||    
T  31862451 attgatacatgcatgcttggttgatcgtagtcacaaaagtacaatgtcgaaattttgaaatcttgtaaatatttttgaataaaagccttccacgtgttac 31862550  T
Q  497 tttgaggctatactttctattttgcctcaattggttcatacttcatttgccttggattttaagcaatgtc 566  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31862551 tttgaggttatactttctattttgcctcaattggttcatacttcatttgccttggattttaagcaatgtc 31862620  T

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